Miyakogusa Predicted Gene

Lj0g3v0196219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196219.1 Non Chatacterized Hit- tr|O23545|O23545_ARATH
Putative uncharacterized protein AT4g17010
OS=Arabidop,53.97,0.000000005,coiled-coil,NULL; seg,NULL,CUFF.12413.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17010.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   145   1e-35

>AT4G17010.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr4:9576442-9577627 FORWARD LENGTH=160
          Length = 160

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 94/128 (73%)

Query: 1   MNKFVEFGRKALFYVRVLSGYEERKIRSFXXXXXXXXXXXXXXXXXINKVPEQVMLSEVR 60
           MNK +E+GRKA+FYVRVLSGYEER+IRS+                 IN++PEQ++LSEVR
Sbjct: 1   MNKLLEYGRKAMFYVRVLSGYEERRIRSYRLQLEKRIQQANQRKVEINRLPEQIVLSEVR 60

Query: 61  RMVEEMQALNKKLEETEVAIEEYFKPLDKEAEIIMQMQLQREEKTSEMMMSALEQQALLK 120
           RMVEEMQ LNK++E TE  IE+YFKP+DK A  IM++QL+ E+KT   MM+A +Q+A+ K
Sbjct: 61  RMVEEMQNLNKQIENTEAQIEDYFKPIDKHASTIMEIQLEGEKKTMGTMMNATQQEAIRK 120

Query: 121 NDEAGKTA 128
            +EA K A
Sbjct: 121 IEEAEKLA 128