Miyakogusa Predicted Gene

Lj0g3v0195949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0195949.1 Non Chatacterized Hit- tr|I1MLF1|I1MLF1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57040
PE,97.3,0.0000000000004,no description,NULL; ACTIN-RELATED PROTEIN 2,
ARP2,NULL; ACTIN,Actin-like; Actin,Actin-like;
Actin-l,BP074351.path2.1
         (49 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | actin related protein...    77   3e-15
AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FOR...    49   6e-07
AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915924-19917371 F...    47   2e-06
AT2G37620.2 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779761-1578...    47   2e-06
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779761-1578...    47   2e-06
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6...    47   2e-06
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18216539-18217947 F...    47   2e-06
AT3G18780.1 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6...    47   2e-06

>AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | actin related protein 2
           | chr3:9952787-9955784 REVERSE LENGTH=389
          Length = 389

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/37 (97%), Positives = 37/37 (100%)

Query: 11  ETTILVKNYTLPDGRVIQVGTERFQAPEALFTPELID 47
           ETTILVKNYTLPDGRVI+VGTERFQAPEALFTPELID
Sbjct: 233 ETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELID 269


>AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052809-3054220
           FORWARD LENGTH=377
          Length = 377

 Score = 48.9 bits (115), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/30 (66%), Positives = 23/30 (76%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P LI
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSLI 269


>AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915924-19917371
           FORWARD LENGTH=377
          Length = 377

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 24/30 (80%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G+ERF+ PE L+ P +I
Sbjct: 240 KNYELPDGQVITIGSERFRCPEVLYQPSMI 269


>AT2G37620.2 | Symbols: ACT1, AAc1 | actin 1 |
           chr2:15779761-15781241 FORWARD LENGTH=377
          Length = 377

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 24/30 (80%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G+ERF+ PE L+ P +I
Sbjct: 240 KNYELPDGQVITIGSERFRCPEVLYQPSMI 269


>AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 |
           chr2:15779761-15781241 FORWARD LENGTH=377
          Length = 377

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 24/30 (80%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G+ERF+ PE L+ P +I
Sbjct: 240 KNYELPDGQVITIGSERFRCPEVLYQPSMI 269


>AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 |
           chr3:6475535-6476832 FORWARD LENGTH=377
          Length = 377

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 22/30 (73%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P  +
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSFV 269


>AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18216539-18217947
           FORWARD LENGTH=377
          Length = 377

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 22/30 (73%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P  +
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSFV 269


>AT3G18780.1 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 |
           chr3:6475535-6476728 FORWARD LENGTH=371
          Length = 371

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 22/30 (73%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P  +
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSFV 269