Miyakogusa Predicted Gene
- Lj0g3v0195839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0195839.1 Non Chatacterized Hit- tr|B9SSN0|B9SSN0_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus commun,65.37,0,no
description,NULL; coiled-coil,NULL; seg,NULL; DEAD-like helicases
superfamily,Helicase, superfami,CUFF.12411.1
(1464 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 1593 0.0
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 1400 0.0
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 588 e-167
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 545 e-154
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 545 e-154
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 541 e-153
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 538 e-152
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 252 1e-66
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 237 4e-62
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 176 1e-43
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 159 1e-38
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 159 1e-38
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 159 2e-38
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 156 9e-38
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 156 1e-37
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 156 1e-37
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 155 2e-37
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 149 2e-35
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 149 2e-35
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 148 2e-35
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 141 4e-33
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 127 9e-29
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 119 2e-26
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 107 6e-23
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 70 8e-12
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 1593 bits (4125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 835/1404 (59%), Positives = 1005/1404 (71%), Gaps = 45/1404 (3%)
Query: 75 IYEKLSCEGFTNHHIELALSVLKDAATFESALDWLCLNLPSDELPLKFSTGASSF-DKGG 133
+YEKLSCEGF + IELALS L+D ATFE+ALDWLCLNLPS ELP+KFSTGAS F GG
Sbjct: 78 VYEKLSCEGFVDDQIELALSSLRDGATFEAALDWLCLNLPSHELPVKFSTGASRFPSTGG 137
Query: 134 SVGVVVFQNSXXXXXXXXXXXXXXXXXXXXXXXQFLIKRRQLNDXXXXXLDSSFQKSQAD 193
SVGV+ S +K +Q + SS + SQAD
Sbjct: 138 SVGVI----STSRDDWNDSTDSSVRVEEEEPAVFVRVKGKQDEEDTL----SSDKSSQAD 189
Query: 194 WIKQYVQQQXXXXXXXXXXXXXYDFNCGARSNRIKQQPRSYDVIXXXXXXXXXXXXXXXX 253
WI+QY+ +Q G PR +DVI
Sbjct: 190 WIRQYMMRQEEEELECWEDEVD-----GIDPRNKVSGPRPFDVIAKEYYSARSDAIKAKE 244
Query: 254 KGDKKQKEQAGIVIRELKQEMSALGLSXXXXXXXXXXXHGKISSDPASERGNEPFDCVGD 313
K DK+ +EQAG+ IR+LKQE+S LGLS H + + A+E+ E + D
Sbjct: 245 KRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREH---AFESATEQ--ESTCPISD 299
Query: 314 NTPCDVGGDSVVALPSDGKLXXXXXXXXXXHSKEENLHVERDSAKGE--------GGDIE 365
N V D V D L S+E S+ G+ D+E
Sbjct: 300 NLHESVDADDVSVQMLDN-LTLNTNPAESYESEEIQTKALPSSSSGQDFVASDEDSEDVE 358
Query: 366 LGGFFMEDVPS-----NEMLKAQKQEKIKRXXXXXXXXXXXDGIWKKGDPQKSPKAILHQ 420
LG F E++P +E+L+ QK+EK+ R DGIWKKG+ QK PKA LHQ
Sbjct: 359 LGDTFFEEIPPSEISPHELLELQKEEKM-RELRSEKNLGKLDGIWKKGEAQKIPKAFLHQ 417
Query: 421 MCQRSGWDAPKFNKVLGRGKSFSYTVSILRKASGRGKSRKAGGLVTFQLPDQNETFESAE 480
+CQRSGW+APKFNK G G++FSYTVSILRKASGRGK+R+AGGLVT QLP ++E FES E
Sbjct: 418 LCQRSGWEAPKFNKETGEGRNFSYTVSILRKASGRGKNRQAGGLVTLQLPPKDENFESIE 477
Query: 481 DAQNKVAAYALFQLFPDTPVHLPITEPYASFVIKLMEGES-STKLEDSEEDHRSRFVDSL 539
DAQNKVAA+AL +LF D PVH ITEPYAS V+ + E T ++ +EED R+ FVD L
Sbjct: 478 DAQNKVAAFALHKLFSDLPVHFAITEPYASLVLIWKQEELLCTTIQSTEEDRRANFVDKL 537
Query: 540 LLGNGSGETASVDVTDCKPP--ESFVRQDENKNSTHSSPQPFSQREIHMKEMESAELRKA 597
L + T S + P +S+V+ ++ S+ + ++R+ ++ E E L++
Sbjct: 538 LEEDSFSLTTSSSSFENSLPLVDSYVKDKDDLGVVKSNNR--AKRDSYI-EAECLSLQRK 594
Query: 598 QGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDD 657
Q NK R+Q+Y+DM K R LPI+ +K ILQ LKE DVLVVCGETGSGKTTQVPQFILDD
Sbjct: 595 QENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDD 654
Query: 658 MIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTK 717
MI+SG GG+CNI+CTQPRRIAAISVA+RVADERCE SPGL SLVGYQVRL+SA+++KT+
Sbjct: 655 MIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTR 714
Query: 718 LLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTE-SSTKL 776
LLFCTTGILLRKL GDR L +THIIVDEVHERSLLGDFLLI+LK L+EK+S + +S KL
Sbjct: 715 LLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKL 774
Query: 777 KVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLASDSPASLAYG 836
KVILMSATVDA LFSRYFGHCPV+TA+GRTHPVTT FLE+IY+ INY LA DSPA+L
Sbjct: 775 KVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSD 834
Query: 837 GFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSYSEQAQQNLKR 896
K + GSV + RGKKNLVL+GWGD+ LLSE+ NP++V SNY SYS+Q QQNLKR
Sbjct: 835 TSIK---DKLGSVNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKR 891
Query: 897 LNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIP 956
LNED IDY+LLE+LIC ID+T EGAIL+FLPGV+EI L D L AS++F G ++DW++P
Sbjct: 892 LNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLP 951
Query: 957 LHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKL 1016
LHSS+AS+EQ++VFLRPP +RKV+ ATNIAETSITIDDVVYVID G+ KEN Q KL
Sbjct: 952 LHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKL 1011
Query: 1017 SSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQ 1076
SS+V+DWIS VKPGICF LYTR+RFE+LMRPYQVPEMLRMPLVELCLQ
Sbjct: 1012 SSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQ 1071
Query: 1077 IKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLI 1136
IKLL LGHIKPFLS ALEPP AM +A+SLL+EVGA+EGDE LTPLGHHLAKLPVDVLI
Sbjct: 1072 IKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLI 1131
Query: 1137 GKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDM 1196
GKM+LYG IFGCLSPILS++AFLSYKSPFIYPKDEKQNV+R KLALL+ S D N+
Sbjct: 1132 GKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNN 1191
Query: 1197 DRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIG 1256
DRQSDHLLMM AY+KW KIL ++G KAAQ+FC S FLSSSVM IR+MRVQFGTLLADIG
Sbjct: 1192 DRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIG 1251
Query: 1257 LISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVA 1316
LI+LPK + G+K LD D +QPFN+YS V+KAILCAGLYPN+AA ++GI
Sbjct: 1252 LINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITE 1311
Query: 1317 ATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLR 1376
T +SL + N + W+DGRREVH+HPSSINSN KAFQ PF+VFLEKVETNKV+LR
Sbjct: 1312 TTFNSLTK-QGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLR 1370
Query: 1377 DTSVISPYSILLFGGSINVQHQTGLVAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIR 1436
DT+++SP+SILLFGGSINV HQ+G V IDGWLK+ APAQ AVLFKELRL LHSILK+LIR
Sbjct: 1371 DTTIVSPFSILLFGGSINVHHQSGSVTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIR 1430
Query: 1437 KPENAIVVNNEIIKSIINLLLEEG 1460
KPE + +V+NE++KS+++LL+EEG
Sbjct: 1431 KPEKSGIVHNEVVKSMVHLLIEEG 1454
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 1400 bits (3625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/1393 (54%), Positives = 948/1393 (68%), Gaps = 63/1393 (4%)
Query: 75 IYEKLSCEGFTNHHIELALSVLKDAATFESALDWLCLNLPSDELPLKFSTGASSF-DKGG 133
+YE LSCEGF ++ IEL LS L+D AT E+ALDWLCLNLPS ELP+ FS GAS F G
Sbjct: 76 LYENLSCEGFLDNQIELVLSSLRDGATLETALDWLCLNLPSHELPVNFSNGASRFPSTGR 135
Query: 134 SVGVVVFQNSXXXXXXXXXXXXXXXXXXXXXXXQFLIKRRQLNDXXXXXLDSSFQKSQAD 193
SV V+ S + L++ + D SS Q SQAD
Sbjct: 136 SVAVI----SKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRDEEEEDSLSSCQPSQAD 191
Query: 194 WIKQYVQQQXXXXXXXXXXXXXYDFNCGARSNRIKQQPRSYDVIXXXXXXXXXXXXXXXX 253
WI QY+++ D G PRS++VI
Sbjct: 192 WIHQYMKRLEEEELESSDDER--DKVSG---------PRSFEVIAKEYCVERYNAIKAKR 240
Query: 254 KGDKKQKEQAGIVIRELKQEMSALGLSXXXXXXXXXXXHGKISSDPASERGNEPFDCVGD 313
KGDK + QAG+ I +LK+EM+ALG S + D R E V D
Sbjct: 241 KGDKSGQSQAGLAICKLKEEMNALGPSEAILESEFQ----RDRQDCEGAREKEVASSVLD 296
Query: 314 NTPCDVGGDSVVALPSDGKLXXXXXXXXXXHSKEENLHVERDSAKGEGGDIELGGFFMED 373
+ V D+ D L S+E+ V DS
Sbjct: 297 DVHESVNADAFFFQLFDD-LTLDTNPVGSCKSEEQESVVSNDSLDDLDLGDLFDEDVPPY 355
Query: 374 VPS-NEMLKAQKQEKIKRXXXXXXXXXXXDGIWKKGDPQKSPKAILHQMCQRSGWDAPKF 432
VPS +E+L+ QK+E I R +GIWKKG+ QK PKA+LHQ+CQRSGW APKF
Sbjct: 356 VPSPHELLELQKKE-IMRELCNEKHLTKLNGIWKKGEAQKIPKALLHQLCQRSGWIAPKF 414
Query: 433 NKVLGRGKSFSYTVSILRKASGRGKSRKAGGLVTFQLPDQNETFESAEDAQNKVAAYALF 492
NKV G G++FSYT S++RK+SG GKSR+AGGLVT QLP Q E FES +DAQN+VAA+AL
Sbjct: 415 NKVTGEGRNFSYTTSVMRKSSGFGKSRQAGGLVTIQLPHQVEDFESIQDAQNRVAAFALH 474
Query: 493 QLFPDTPVHLPITEPYASFVIKLMEGESSTKLEDSEEDHRSRFVDSLLLG-NGSGETASV 551
+LF D PVH ITEPYAS V+ + + E S + EE R +FV+SLL N S T S
Sbjct: 475 KLFSDLPVHFAITEPYASLVL-IWKQEESLGITSREEQRREKFVESLLEADNFSLTTTSR 533
Query: 552 DVTDCKP-PESFVRQDENKNSTHSSPQPFSQREIHMKEMESAELRKAQGNKMRSQRYQDM 610
+ P +S V+++++ + S+ + ++R M E + L++ Q NK + Q+Y+DM
Sbjct: 534 GIHSALPMVDSCVKENDDLDVVKSNHR--ARRNSSMA-AECSSLKQKQENKKKMQKYKDM 590
Query: 611 SKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIV 670
K RA LPI+ +K DILQ LKE DVLVVCGETGSGKTTQVPQFILDDMI+SG GG+CNI+
Sbjct: 591 LKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNII 650
Query: 671 CTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKL 730
CTQPR AI+VA+RVADERCEP PG S+V YQVR +A+++KT+LLFCTTGILLRKL
Sbjct: 651 CTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKL 707
Query: 731 MGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESST-KLKVILMSATVDATL 789
+GD L +THIIVDEVHERSL+GDFLLI+LK L+EK+S +++ KLKVILMSATVDA
Sbjct: 708 VGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQ 767
Query: 790 FSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQNSQKGSV 849
FSRYFG CP++TA+GRTHPVTT FLEDIY++ Y LASDSPA+L+ + GSV
Sbjct: 768 FSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSD---TSITDKLGSV 824
Query: 850 TNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLED 909
RGKKNL+L+GWGD L+SE+S N ++Y S +K + V+DYDLLE+
Sbjct: 825 NVPRGKKNLMLAGWGDSYLVSEDSLN-----TSYDS--------IKYIASAVVDYDLLEE 871
Query: 910 LICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRV 969
LIC ID+T EGAILVFLPG+SEIN L ++L AS++F G S DW++PLHSS+ASTEQK+V
Sbjct: 872 LICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKV 931
Query: 970 FLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXX 1029
FLRPP IRKV+IATNIAETSITI+DVVYVID G+ KEN KLSS+V+DW+S
Sbjct: 932 FLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANA 991
Query: 1030 XXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFL 1089
VKPG CF LYTRHRFE+LMRPYQVPEMLR+PLVELCL IKLL LG IKPFL
Sbjct: 992 RQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFL 1051
Query: 1090 SEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCL 1149
S+ALEPP A+++A+ LL++VGALEGDE LTPLGHHLAKLPVD+LIGKM+LYG IFGCL
Sbjct: 1052 SKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCL 1111
Query: 1150 SPILSVSAFLS-YKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKA 1208
SPILS++AFLS KSPF+Y KDE QNV+R KLALL+ K++ S + N+ DRQSDHLLM+ A
Sbjct: 1112 SPILSIAAFLSCCKSPFVYAKDE-QNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVA 1170
Query: 1209 YEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDG 1268
YEKW +IL+++G KAA+ FC S FL+SSVM +RE RV+FG LLADIGLI+LPK G
Sbjct: 1171 YEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKG---KG 1227
Query: 1269 KKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSN 1328
++ D D +QPFN+YS V+KAILCAGL PN+A G + +R +
Sbjct: 1228 RRKENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYA-- 1285
Query: 1329 AYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK-VFLRDTSVISPYSIL 1387
+W DG+REVH+H +SIN N KAFQYPFIVFLEK+ET K V+L+DT+V+SP+SIL
Sbjct: 1286 ------VWHDGKREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSIL 1339
Query: 1388 LFGGSINVQHQTGLVAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVVNNE 1447
LFGGSINV HQ+G V IDGWLKLTAPAQ AVLFKELRL LHSILK+LIRKPE + +V+NE
Sbjct: 1340 LFGGSINVHHQSGSVTIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNE 1399
Query: 1448 IIKSIINLLLEEG 1460
++KS+++LL+EEG
Sbjct: 1400 VVKSMVHLLIEEG 1412
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust.
Identities = 342/874 (39%), Positives = 506/874 (57%), Gaps = 85/874 (9%)
Query: 587 KEMESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGK 646
KE S L++ Q ++ + + FR LP +K + L + +N VLVV GETG GK
Sbjct: 198 KEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGK 257
Query: 647 TTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQV 706
TTQ+PQFIL++ I S G CNI+CTQPRRI+AISVA R++ ER E G VGYQ+
Sbjct: 258 TTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESI----GESVGYQI 313
Query: 707 RLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVE 766
RL+S ++++T+LLFCTTG+LLR+L+ D NLT ++H++VDE+HER + DFLLI+L+DL+
Sbjct: 314 RLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLP 373
Query: 767 KRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLA 826
+R L++ILMSAT++A +FS YFG+ P + G T PV FLED+ ++ Y +
Sbjct: 374 RRP-----DLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIK 428
Query: 827 SDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSY 886
S + Q S +G S KK+ D + L E+ + S+Y+SY
Sbjct: 429 SSDSGNY--------QGSSRGRRRESESKKD-------DLTTLFEDID----INSHYKSY 469
Query: 887 SEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQF 946
S + +L+ + ID DL+E I I G GAILVFL G EI+ L +K+ ++
Sbjct: 470 SSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFL 529
Query: 947 GGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPK 1006
G S V+PLH S+ + Q+ +F RPP N RK+V+ATNIAE+SITIDDVVYV+DCG+ K
Sbjct: 530 GDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAK 589
Query: 1007 ENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEML 1066
E A K++ ++ WIS V+ G+C+ LY + ++ + YQ+PE++
Sbjct: 590 ETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQ-YQLPEII 648
Query: 1067 RMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHH 1126
R PL ELCL IK L +G I FL++AL+PP A++ A+ LL +GAL E LTPLG H
Sbjct: 649 RTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRH 708
Query: 1127 LAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYK 1186
L LPVD IGKM+L GAIF C++P L+++A L+Y+SPF+ P + K+ + AK
Sbjct: 709 LCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYF---- 764
Query: 1187 IDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRV 1246
+GD+ SDH+ ++KAYE + + K + FC FLS + + +MR
Sbjct: 765 ---AGDSC-----SDHIALLKAYEGYR---DAKRGGNEKDFCWQNFLSPVTLRMMEDMRN 813
Query: 1247 QFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQP--FNIYSHHSSVLKAILCAGLY 1304
QF LL+DIG + D S+P +N YS+ ++ A+LCAGLY
Sbjct: 814 QFLDLLSDIGFV---------------------DKSKPNAYNQYSYDMEMISAVLCAGLY 852
Query: 1305 PNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVF 1364
PNV + +R A+ + L +V +HP S+N+ F P++V+
Sbjct: 853 PNVVQCK-----------RRGKRTAFYTKELG-----KVDIHPGSVNARVNLFSLPYLVY 896
Query: 1365 LEKVETNKVFLRDTSVISPYSILLFGGS-INVQHQTGLVAIDGWLKLTAPAQIAVLFKEL 1423
EKV+T V++RD++ IS Y++L+FGG+ I + G+ + G+L +A I L + L
Sbjct: 897 SEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELIQRL 956
Query: 1424 RLRLHSILKELIRKPENAIVVNNE-IIKSIINLL 1456
R + +L + I P I V + ++ +++ LL
Sbjct: 957 RGEVDKLLNKKIEDPSLDITVEGKGVVSAVVELL 990
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 545 bits (1403), Expect = e-154, Method: Compositional matrix adjust.
Identities = 335/898 (37%), Positives = 500/898 (55%), Gaps = 85/898 (9%)
Query: 568 NKNSTHSSPQPFSQREIHMKEM---ESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKG 624
N + +P+ Q + + + S +L+ Q + S Q M FR TLP K
Sbjct: 247 NGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKTLPAYKEKD 306
Query: 625 DILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAE 684
+L+ + N V+VV GETG GKTTQ+PQ+IL+ IE+ G C+I+CTQPRRI+AISV+E
Sbjct: 307 ALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSE 366
Query: 685 RVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIV 744
RVA ER E G VGY+VRL+ + T+LLFCTTG+LLR+L+ DR+L G+TH++V
Sbjct: 367 RVAAERGEQI----GESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVV 422
Query: 745 DEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEG 804
DE+HER + DFLLIVLKDL+ +R LK+ILMSAT++A LFS YFG P + G
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRRP-----DLKLILMSATLNAELFSSYFGGAPAMHIPG 477
Query: 805 RTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWG 864
T+PV FLED + YRL + + + G K QK + R K+L+ S
Sbjct: 478 FTYPVRAHFLEDYLETSGYRLTTYN--QIDDYGEEKTWKMQKQAQFKKR--KSLISSAVE 533
Query: 865 DESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAIL 924
D ++++ Y+ + + +L + D I ++L+E+++C I + GA+L
Sbjct: 534 DA-----------LEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVL 582
Query: 925 VFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIAT 984
VF+ G +IN+L ++L A G + ++ H S+AS+EQ+ +F RPP IRK+V+AT
Sbjct: 583 VFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLAT 642
Query: 985 NIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGIC 1044
N+AETSITI+DVVYVIDCG+ KE A ++ WIS V PG C
Sbjct: 643 NMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGEC 702
Query: 1045 FCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTA 1104
+ LY R +E YQ PE+LR PL LCLQIK L LG I FLS AL+PP+ ++ A
Sbjct: 703 YHLYPRCVYEAFA-DYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNA 761
Query: 1105 VSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSP 1164
V L +GAL+ DE LTPLG +L+ LPV+ +GKM++ GAIF CL P+++V A LS + P
Sbjct: 762 VEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP 821
Query: 1165 FIYPKDEKQNVE--RAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTK 1222
F+ P D+K E R+K + +Y SDHL +++AY W+ + + T
Sbjct: 822 FLMPFDKKDLAETARSKFSGRDY--------------SDHLTLVRAYNGWK---DAERTH 864
Query: 1223 AAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDAS 1282
+ +C FLSS + + MR QF LL + LI D
Sbjct: 865 SGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLI---------------------DNI 903
Query: 1283 QPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRRE 1342
+ + SH +++AI+CAG++P V + + TL +++ DG +
Sbjct: 904 EGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTME--------------DG--Q 947
Query: 1343 VHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTG-L 1401
V ++ SS+N N +P++VF +KV+ N VFLRD++ +S +LLFG I+ G L
Sbjct: 948 VLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHL 1007
Query: 1402 VAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSIINLLLEE 1459
+ G+L+ +A + L+ L +++ + P+ I + ++++ +I L+ E+
Sbjct: 1008 KMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVSED 1065
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 545 bits (1403), Expect = e-154, Method: Compositional matrix adjust.
Identities = 335/898 (37%), Positives = 500/898 (55%), Gaps = 85/898 (9%)
Query: 568 NKNSTHSSPQPFSQREIHMKEM---ESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKG 624
N + +P+ Q + + + S +L+ Q + S Q M FR TLP K
Sbjct: 247 NGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKTLPAYKEKD 306
Query: 625 DILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAE 684
+L+ + N V+VV GETG GKTTQ+PQ+IL+ IE+ G C+I+CTQPRRI+AISV+E
Sbjct: 307 ALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSE 366
Query: 685 RVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIV 744
RVA ER E G VGY+VRL+ + T+LLFCTTG+LLR+L+ DR+L G+TH++V
Sbjct: 367 RVAAERGEQI----GESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVV 422
Query: 745 DEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEG 804
DE+HER + DFLLIVLKDL+ +R LK+ILMSAT++A LFS YFG P + G
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRRP-----DLKLILMSATLNAELFSSYFGGAPAMHIPG 477
Query: 805 RTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWG 864
T+PV FLED + YRL + + + G K QK + R K+L+ S
Sbjct: 478 FTYPVRAHFLEDYLETSGYRLTTYN--QIDDYGEEKTWKMQKQAQFKKR--KSLISSAVE 533
Query: 865 DESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAIL 924
D ++++ Y+ + + +L + D I ++L+E+++C I + GA+L
Sbjct: 534 DA-----------LEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVL 582
Query: 925 VFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIAT 984
VF+ G +IN+L ++L A G + ++ H S+AS+EQ+ +F RPP IRK+V+AT
Sbjct: 583 VFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLAT 642
Query: 985 NIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGIC 1044
N+AETSITI+DVVYVIDCG+ KE A ++ WIS V PG C
Sbjct: 643 NMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGEC 702
Query: 1045 FCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTA 1104
+ LY R +E YQ PE+LR PL LCLQIK L LG I FLS AL+PP+ ++ A
Sbjct: 703 YHLYPRCVYEAFA-DYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNA 761
Query: 1105 VSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSP 1164
V L +GAL+ DE LTPLG +L+ LPV+ +GKM++ GAIF CL P+++V A LS + P
Sbjct: 762 VEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP 821
Query: 1165 FIYPKDEKQNVE--RAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTK 1222
F+ P D+K E R+K + +Y SDHL +++AY W+ + + T
Sbjct: 822 FLMPFDKKDLAETARSKFSGRDY--------------SDHLTLVRAYNGWK---DAERTH 864
Query: 1223 AAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDAS 1282
+ +C FLSS + + MR QF LL + LI D
Sbjct: 865 SGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLI---------------------DNI 903
Query: 1283 QPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRRE 1342
+ + SH +++AI+CAG++P V + + TL +++ DG +
Sbjct: 904 EGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTME--------------DG--Q 947
Query: 1343 VHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTG-L 1401
V ++ SS+N N +P++VF +KV+ N VFLRD++ +S +LLFG I+ G L
Sbjct: 948 VLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHL 1007
Query: 1402 VAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSIINLLLEE 1459
+ G+L+ +A + L+ L +++ + P+ I + ++++ +I L+ E+
Sbjct: 1008 KMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVSED 1065
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 329/886 (37%), Positives = 498/886 (56%), Gaps = 81/886 (9%)
Query: 576 PQPFSQREIHMKEMESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDV 635
P P S +I + S +LR Q S Q M R +LP + +L + +N V
Sbjct: 181 PLPISATKILWQR--SLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQV 238
Query: 636 LVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSP 695
+V+ GETG GKTTQ+PQFIL+ IE+ G +I+CTQPRRI+A+SV+ERVA ER E
Sbjct: 239 IVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQ-- 296
Query: 696 GLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGD 755
G VGY+VRL+ K T+LLFCTTGILLR+L+ DRNL G+TH+IVDE+HER + D
Sbjct: 297 --LGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNED 354
Query: 756 FLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLE 815
FLLI+LKDL+ +RS +LK+ILMSAT+DA LFS YFG V+ G T+PV + FLE
Sbjct: 355 FLLIILKDLLSRRS-----ELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLE 409
Query: 816 DIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSN 875
DI + YRL P Q G + K + + + E++
Sbjct: 410 DILEMTRYRLT------------PYNQIDDYGQERTWKMNKQIPKKRKSQITFVVEDA-- 455
Query: 876 PYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINN 935
++++ +S + +++L D I ++L+E L+C I E G G IL+FL G +I++
Sbjct: 456 --LRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISS 513
Query: 936 LYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDD 995
L +KL FG ++ H S+ + EQ+ +F P +RK+V+ATNIAETSITI+D
Sbjct: 514 LKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITIND 573
Query: 996 VVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFER 1055
V +VIDCG+ KE A ++ WIS V+PG C+ LY + ++
Sbjct: 574 VAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDA 633
Query: 1056 LMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALE 1115
YQ+PE+LR PL LCLQIK L+LG I FLS AL+ P+ A+ A++ L +GAL+
Sbjct: 634 FAE-YQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALD 692
Query: 1116 GDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNV 1175
+E LT LG +L+KLP++ +GKM++ GAI GCL PIL+V+A LS + PF+ P+D+K
Sbjct: 693 ENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLA 752
Query: 1176 ERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSS 1235
E AK S + D SDHL +++AYE W+K + A +C FLS
Sbjct: 753 EAAK----------SQFSRD---HSDHLALVRAYEGWKKAEEE---SAVYDYCWKNFLSI 796
Query: 1236 SVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVL 1295
+ I +R +F +LL D GLI DG + +C++ + +++
Sbjct: 797 QSLRAIDSLRKEFFSLLKDTGLI--------DG------NPSICNSE------GNDANLT 836
Query: 1296 KAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTK 1355
+A++C G+YP + + + +L +++ DG +V ++ +S N+
Sbjct: 837 RAVICYGMYPGICSVVHNERSFSLKTME--------------DG--QVLLYSNSENARET 880
Query: 1356 AFQYPFIVFLEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTG-LVAIDGWLKLTAPA 1414
YP++VF EK++ N VFLRD++ S +++LFGGSI+ G L + G+L+
Sbjct: 881 KIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGGYLEFFMKP 940
Query: 1415 QIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSIINLLLEEG 1460
+A +++ L+ L +++ + P+ + + E++ +I L+ E+G
Sbjct: 941 DVAEIYQTLKKELDELIQNKLLNPKVDMQAHRELLSAIRLLVSEDG 986
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 333/911 (36%), Positives = 505/911 (55%), Gaps = 90/911 (9%)
Query: 536 VDSLLLGNGSGETASVDVTDCKPPESFVR-QDENKNSTHSSPQPFSQREIHMKEME--SA 592
+DS L +G V D +PP+ DEN +S F + K ++ S
Sbjct: 186 LDSQQLSSGKANEC---VADSQPPKQTEELPDENSDS-------FLDGSVMEKVLQRRSM 235
Query: 593 ELRKAQGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQ 652
+R Q S + M +FR TLP K +LQ + N V+VV GETG GKTTQ+PQ
Sbjct: 236 RMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQ 295
Query: 653 FILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAK 712
+IL+ IESG G CNI+CTQPRRI+A++V+ERV+ ER EP G VG++VRL+ +
Sbjct: 296 YILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEP----LGETVGFKVRLEGMR 351
Query: 713 NEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTES 772
+ T LLFCT+GILLR+L+ DRNL G+TH+ VDE+HER + DFL+IVLK+L+ +R
Sbjct: 352 GKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRP--- 408
Query: 773 STKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLASDSPAS 832
L+++LMSAT++A LFS Y+G P + G THPV FLED+ + Y+L S +
Sbjct: 409 --DLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVD 466
Query: 833 LAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSYSEQAQQ 892
YG K +QK + R +KN + + L EE+ SN++SY+ + +
Sbjct: 467 -DYGQ-EKTWKTQKQLM--PRKRKNQITT-------LVEEA----LSKSNFESYNSRTRD 511
Query: 893 NLKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSD 952
+L D I ++L+E ++C I GA+LVFL G +I +L D++ A G +
Sbjct: 512 SLSSWMPDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRV 571
Query: 953 WVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYA 1012
++ H S+A+ EQ+ +F R P NIRK+V+ATN+AE SITI+DVV+V+DCG+ KE A
Sbjct: 572 LLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDA 631
Query: 1013 QMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVE 1072
++ WIS + PG C+ LY + ++ YQ+PE+LR PL
Sbjct: 632 LNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAE-YQLPELLRTPLNS 690
Query: 1073 LCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1132
LCLQIK L + I FLS AL+ P++ A+ A+ L +GAL+ E LT LG L+ LPV
Sbjct: 691 LCLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPV 750
Query: 1133 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1192
D +GKM++ GAIF C PIL++ + LS + PF+ P+D+K AKL
Sbjct: 751 DPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRF---------- 800
Query: 1193 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1252
SDH+ +++A+E W+ + + +A +FC FLS+ + I +R QF +L
Sbjct: 801 --SAKDYSDHMALVRAFEGWK---DAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYIL 855
Query: 1253 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1312
+ GL+ D + + N SH+ S+++A++C+GL+P +A
Sbjct: 856 KEAGLVH---------------DDLALN-----NKLSHNQSLVRAVICSGLFPGIA---- 891
Query: 1313 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK 1372
S + R +S ++ DG +V ++ +S+NS YP++VF EKV+ N
Sbjct: 892 -------SVVHRETSMSFKTMD---DG--QVSLYANSVNSRFPTIPYPWLVFGEKVKVNA 939
Query: 1373 VFLRDTSVISPYSILLFGGSINVQHQTG-LVAIDGWLKLTAPAQIAVLFKELRLRLHSIL 1431
V +RD++ + S++LFGGS++ Q G L +DG++ +A + +L+ L +L
Sbjct: 940 VLIRDSTGVPDSSLILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLL 999
Query: 1432 KELIRKPENAI 1442
++ + P I
Sbjct: 1000 QKKLEDPSMDI 1010
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue and
tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 252 bits (644), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 255/504 (50%), Gaps = 45/504 (8%)
Query: 894 LKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDW 953
+ +N + +D L++ L+ I +GAILVFLPG +IN +L+ + F +
Sbjct: 525 MATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD 584
Query: 954 VIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQ 1013
+I LHS V + EQK+VF RPP RK+V+ATNIAE+++TIDDVVYVID GR KE
Sbjct: 585 IICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 644
Query: 1014 MKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVEL 1073
+S++ W+S +PGIC+ LY+R R M ++VPE+ RMP+ EL
Sbjct: 645 NNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVEEL 703
Query: 1074 CLQIKLLSLG-HIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1132
CLQ+K+L FL + L+PP ++++ A+S+L ++GAL E LT LG LPV
Sbjct: 704 CLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPV 763
Query: 1133 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1192
LI KM+ + + CL P L+++ YK PF P + + A L + G GD
Sbjct: 764 HPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCG-GD 822
Query: 1193 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1252
SDHL ++ A+E W+ N KG + +FC+ YF+S S M + +MR Q + L
Sbjct: 823 -------SDHLAVVAAFECWK---NAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESEL 872
Query: 1253 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1312
G+I P D + SQ S +L+A+L GLYP V
Sbjct: 873 KRHGII--PND--------------ISSCSQ----NSRDPGILRAVLAVGLYPMV----- 907
Query: 1313 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETN- 1371
G + + +R+ SG + VH ++ N ++K + +VF E +
Sbjct: 908 GRLCPAFGNNRRTIVETASG------AKVRVHSLSNNFNLSSKKYDESLLVFDEITRGDG 961
Query: 1372 KVFLRDTSVISPYSILLFGGSINV 1395
+ +R+ +V +LL I V
Sbjct: 962 GMHIRNCTVARDLPLLLISTEIAV 985
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 143/213 (67%), Gaps = 13/213 (6%)
Query: 608 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 667
++++K R+ LPI + K I ++ N V+++ GETG GKTTQVPQ++LD M S C
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRET-C 236
Query: 668 NIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILL 727
IVCTQPRRI+A+SV+ER++ ER E G +GY+VRL S + ++FCT GILL
Sbjct: 237 KIVCTQPRRISAMSVSERISCERGESI----GENIGYKVRLQSKGGRHSSVVFCTNGILL 292
Query: 728 RKLMGD---RNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSAT 784
R L+G +++ ITHIIVDE+HER DF+L +++DL+ S+ L++ILMSAT
Sbjct: 293 RVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLL-----PSNPHLRLILMSAT 347
Query: 785 VDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDI 817
+DA FS YFG CPVV G T+PV T +LED+
Sbjct: 348 LDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDV 380
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 237 bits (605), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 260/521 (49%), Gaps = 51/521 (9%)
Query: 882 NYQSYSEQAQQNLKR----LNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLY 937
N QS S+QAQ L + + + +D L+ L+ I +GAILVFLPG EI+
Sbjct: 533 NIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTK 592
Query: 938 DKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVV 997
+KL+ F + ++ LHS V + EQK+VF RPP RK+V+ATNIAE+++TIDDVV
Sbjct: 593 EKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVV 652
Query: 998 YVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLM 1057
YVID GR KE +S++ W+S + GIC+ LY++ R L
Sbjct: 653 YVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLP 712
Query: 1058 RPYQVPEMLRMPLVELCLQIKLLSLG-HIKPFLSEALEPPKNEAMDTAVSLLYEVGALEG 1116
Y+VPE++RMP+ ELCLQ+K+L ++ FL + ++PP ++++ A+ +L ++GAL
Sbjct: 713 E-YRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTP 771
Query: 1117 DEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVE 1176
+E LT LG +LPV I KM+ + + CL P L ++ K PF P +
Sbjct: 772 EEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPG---D 828
Query: 1177 RAKLALLNYKIDG-SGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSS 1235
R K A +++ GD SDHL + A++ W+ N K + A++FC+ YF+S
Sbjct: 829 RKKAAAAKHELASLYGD------HSDHLATVAAFQCWK---NAKASGQAKEFCSKYFISQ 879
Query: 1236 SVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVL 1295
VM + ++ + L G+I +S ++ +H +L
Sbjct: 880 VVMKRLDDLCRKLQGELNRHGVIP--------------------SSSSNCSLNAHDPGIL 919
Query: 1296 KAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTK 1355
+A++ GLYP + G + + RS +G + V ++++ ++
Sbjct: 920 RAVIAVGLYPML-----GRMCPLSKNRTRSVIETIAG------AKVRVPSLSNNVDMSST 968
Query: 1356 AFQYPFIVFLEKVETN-KVFLRDTSVISPYSILLFGGSINV 1395
F IVF E + V +R +V+ +LLF I V
Sbjct: 969 KFDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAV 1009
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 150/223 (67%), Gaps = 13/223 (5%)
Query: 603 RSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESG 662
+ + ++++ + R+ LPIA+ + I+ ++ N V+++ GETG GKTTQVPQ++LD M S
Sbjct: 203 KERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSK 262
Query: 663 LGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCT 722
C I+CTQPRRI+AISV++R++ ER E G VGY+VRL S ++ ++FCT
Sbjct: 263 KEA-CKIICTQPRRISAISVSDRISWERGE----TIGRTVGYKVRLQSEGGRESSVVFCT 317
Query: 723 TGILLRKLMG---DRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVI 779
GILLR L+G + ++ ITHIIVDE+HER DF+L++L+DL+ S+ L++I
Sbjct: 318 NGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLP-----SNPHLRLI 372
Query: 780 LMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQIN 822
LMSAT+DA FS YFG CPVV G T+PV T FL+D +N
Sbjct: 373 LMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLN 415
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 175/629 (27%), Positives = 283/629 (44%), Gaps = 117/629 (18%)
Query: 606 RYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGG 665
R ++ + R LPI ++ +I++ + + +++ G+TG GKTTQVPQF + E+G G
Sbjct: 230 RPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQF----LYEAGFGS 285
Query: 666 -----HCNIV-CTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRLDSAKNEKTKL 718
I+ TQPRR+A ++ A+RVA E G++ G VG+QVR D E + +
Sbjct: 286 KQFSSRSGIIGITQPRRVAVLATAKRVAFEL-----GVRLGKEVGFQVRYDKKIGENSSI 340
Query: 719 LFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLV---------EKRS 769
F T GILLR++ D L + II+DE HERSL D L+ +L ++ +++S
Sbjct: 341 KFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKS 400
Query: 770 TESS---------TKLKVILMSATVDATLF---SRYFGHC-PVVTAEGRTHPVTTSFLE- 815
+S T LK+ILMSAT+ F R F + P++ R +PVT F +
Sbjct: 401 LQSGGTVTSECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKK 460
Query: 816 -DIYDQIN--YRLASDSPASLAYGG---FPKGQ-----------NSQKGSVTNSRGKKNL 858
+I D I Y+ L GG F GQ S K V + +
Sbjct: 461 TEIVDYIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAY 520
Query: 859 VLSGWGDESL-----------LSEESSNPYFVPSNYQSYSEQ-------------AQQNL 894
V D S ++S+N S + S+ E ++++
Sbjct: 521 VKKKCDDGSFGGVDMKEIAEAFDDDSNNQN---SRFSSHGEDPSDIGDGNYDDDFEEEDM 577
Query: 895 KRLNEDVIDYDLLEDLIC--FIDETHGEGAILVFLPGVSEINNLYDK-----------LV 941
+ED D++ ++D F++E + F N L DK +
Sbjct: 578 YESDEDR-DWETVDDGFASSFVEEGKLDALRAAF-------NALADKNGSVSAEPAKSIA 629
Query: 942 ASHQFGGQSSDWVIP-------LHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITID 994
A +Q Q + P L++ ++ Q RVF R VV+ATN+AETS+TI
Sbjct: 630 AENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIP 689
Query: 995 DVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFE 1054
+ YV+D GR K ++ + S DWIS PG C+ LY+ F
Sbjct: 690 GIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFS 749
Query: 1055 RLMRPYQVPEMLRMPLVELCLQIKLLSLGHIK--PFLSEALEPPKNEAMDTAVSLLYEVG 1112
+ +PE++++P+ + L +K +++ ++ PF + PP+ A+ A L +
Sbjct: 750 NIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPT----PPEPSAIREAERCLKALE 805
Query: 1113 ALEGDEVLTPLGHHLAKLPVDVLIGKMML 1141
AL+ + LTPLG ++ P+ +M+L
Sbjct: 806 ALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 601 KMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMI- 659
K SQRY ++ + R LP+ K D L L N L++ GETGSGKTTQ+PQF+LD ++
Sbjct: 49 KAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVA 108
Query: 660 -ESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKL 718
S G + CTQPRR+AA+SV+ RVADE + S G + VGY +R + + +T L
Sbjct: 109 DNSDKGRKWLVGCTQPRRVAAMSVSRRVADE-MDVSIGEE---VGYSIRFEDCTSSRTML 164
Query: 719 LFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKV 778
+ T G+LLR+ M D L II+DE HER+L D L +LK+++ R LK+
Sbjct: 165 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRP-----DLKL 219
Query: 779 ILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLED 816
++MSAT++A F YF P++ GR HPV + ++
Sbjct: 220 VVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE 257
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 221/489 (45%), Gaps = 77/489 (15%)
Query: 905 DLLEDLICFIDETH---GEGAILVFLPGVSEINNLYDKLVAS-HQFGGQSSDW-VIPLHS 959
D LE I + + H G ILVFL G EI + K+ G Q V+PL+S
Sbjct: 261 DYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYS 320
Query: 960 SVASTEQKRVFLRPPGNI-------RKVVIATNIAETSITIDDVVYVIDCGRPKENGSYA 1012
++ Q+++F P + RK+V++TNIAETS+TID +VYVID G K+
Sbjct: 321 TLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
Query: 1013 QMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVE 1072
++++ S++ IS +PG CF LYT F ++P PE+LR L
Sbjct: 381 RIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
Query: 1073 LCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1132
L +K L + + F + ++PP E + A+ +L +GAL+ + LT G +++ P+
Sbjct: 441 TVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPL 498
Query: 1133 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1192
D + KM++ F C + ILSVSA LS + F+ P++ ++ + AK + IDG
Sbjct: 499 DPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGH--IDG--- 553
Query: 1193 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1252
DHL ++ Y + K +C F+++ M + +R Q ++
Sbjct: 554 --------DHLTLLNVYHAY------KQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIM 599
Query: 1253 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1312
+ L +C S FN ++ ++ KA+L AG + VA E+
Sbjct: 600 SRFNL-------------------KMC--STDFNSRDYYVNIRKAML-AGYFMQVAHLER 637
Query: 1313 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK 1372
+G L + VH+HP SN + ++++ E V T +
Sbjct: 638 ------------------TGHYLTVKDNQVVHLHP----SNCLDHKPEWVIYNEYVLTTR 675
Query: 1373 VFLRDTSVI 1381
F+R + I
Sbjct: 676 NFIRTVTDI 684
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 226/494 (45%), Gaps = 78/494 (15%)
Query: 895 KRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINN----LYDKLVASHQFGGQS 950
K+ D +D L+ + I T EG ILVFL G EI++ LY+++ G
Sbjct: 700 KQPETDYLDAALI--TVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKG---LGKNV 754
Query: 951 SDWVI-PLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENG 1009
+ +I P++S++ S Q R+F PP RKVV+ATNIAE S+TID + YV+D G K+N
Sbjct: 755 PELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNV 814
Query: 1010 SYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMP 1069
+ L S+V IS PG C+ LYT + M P +PE+ R+
Sbjct: 815 YNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRIN 874
Query: 1070 LVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAK 1129
L L +K + + + F + ++PP+ +A+ +A+ LY +GAL+ + +LT LG +A+
Sbjct: 875 LGMTTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAE 932
Query: 1130 LPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDG 1189
P++ + KM+L GC IL++ A + + F P++++ ++ +
Sbjct: 933 FPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQ----- 987
Query: 1190 SGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFG 1249
+ DHL ++ YE W K + +C F+ S + +++R Q
Sbjct: 988 --------PEGDHLTLLAVYEAW------KAKNFSGPWCFENFIQSRSLRRAQDVRKQ-- 1031
Query: 1250 TLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAA 1309
L+S+ Y KLD V + + + KAI AG +
Sbjct: 1032 -------LLSIMDKY--------KLDVVTAG--------KNFTKIRKAI-TAGFF----- 1062
Query: 1310 GEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVE 1369
++ Y RTL + + V++HPSS Q ++++ + V
Sbjct: 1063 ---------FHGARKDPQEGY--RTLVEN--QPVYIHPSSALFQR---QPDWVIYHDLVM 1106
Query: 1370 TNKVFLRDTSVISP 1383
T K ++R+ +VI P
Sbjct: 1107 TTKEYMREVTVIDP 1120
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 15/197 (7%)
Query: 614 RATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQ 673
R +LPI LK +++Q + +N VLVV GETGSGKTTQV Q+ + E+G I CTQ
Sbjct: 512 RESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQY----LAEAGYTTKGKIGCTQ 567
Query: 674 PRRIAAISVAERVADE-RCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMG 732
PRR+AA+SVA+RVA+E C G VGY +R + T + + T G+LLR+++
Sbjct: 568 PRRVAAMSVAKRVAEEFGCR-----LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 622
Query: 733 DRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSR 792
D NL+ + I++DE HER++ D L +LK L+++R L++I+ SAT+DA FS
Sbjct: 623 DENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRR-----LDLRLIVTSATLDAEKFSG 677
Query: 793 YFGHCPVVTAEGRTHPV 809
YF +C + T GRT PV
Sbjct: 678 YFFNCNIFTIPGRTFPV 694
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 224/493 (45%), Gaps = 74/493 (15%)
Query: 897 LNEDVIDY-DLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVA-SHQFGGQSSDWV 954
+ E V DY + I I+E G +LVFL G +I L +H SS +
Sbjct: 251 VEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLL 310
Query: 955 -IPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQ 1013
+PL+S ++ +EQ+ +F P RKV+++TNIAETS+T++ VVYVID G K+
Sbjct: 311 PLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPI 370
Query: 1014 MKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVEL 1073
+ S+V IS V+PG C+ LYT F M +PEM R LV
Sbjct: 371 SDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVST 430
Query: 1074 CLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLT-PLGHHLAKLPV 1132
+Q+K L + +I F A PP +EAM A+ +LY + L+ D LT P G +A+LP+
Sbjct: 431 VIQLKALGIDNILGFDWPA--PPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPL 488
Query: 1133 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1192
D +I KM+L + GC I++++A LS +S +I + ++ + AKL
Sbjct: 489 DPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRF---------- 538
Query: 1193 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1252
+ DH+ + Y+ + + +K Q+C FL+ M + E+R Q +
Sbjct: 539 ---AAAEGDHVTFLNVYKGFLE------SKKPTQWCYKNFLNYQSMKKVVEIRDQLKRIA 589
Query: 1253 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1312
+G+ L S CD +V KA+ AG + N
Sbjct: 590 RRLGI---------------TLKS--CDGDM--------EAVRKAV-TAGFFANAC---- 619
Query: 1313 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSI--NSNTKAFQYPFIVFLEKVET 1370
L+ S+ Y G EV++HPSS+ N K ++V+ V T
Sbjct: 620 --------RLEPHSNGVYKT----IRGSEEVYIHPSSVLFRVNPK-----WVVYQSIVST 662
Query: 1371 NKVFLRDTSVISP 1383
+ ++R+ I+P
Sbjct: 663 ERQYMRNVVTINP 675
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 36/231 (15%)
Query: 607 YQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGL--G 664
Y ++ K R LP+ + +IL L++ + ++ GETGSGKTTQ+PQ+ + E+G G
Sbjct: 38 YANIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQY----LKEAGWAEG 93
Query: 665 GHCNIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRL-DSAKNEKTKLLFCT 722
G I CTQPRR+A +V+ RVA+E G+ G VGY +R D + T + F T
Sbjct: 94 GRV-IACTQPRRLAVQAVSARVAEEM-----GVNLGEEVGYTIRFEDHTTSGVTSVKFLT 147
Query: 723 TGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMS 782
G+L+R++M D LT + I++DE HERS+ D LL +LK + +R +L++I+ S
Sbjct: 148 DGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRP-----ELRLIISS 202
Query: 783 ATVDATLFSRYFG-----HCP------------VVTAEGRTHPVTTSFLED 816
AT++A S +F H P +++ EGR V ++E+
Sbjct: 203 ATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVEE 253
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 156 bits (395), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 13/200 (6%)
Query: 614 RATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQ 673
R LPI + +L +K++ VL++ GETGSGKTTQ+PQ++ E+G + CTQ
Sbjct: 401 RKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLH----EAGYTKLGKVGCTQ 456
Query: 674 PRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGD 733
PRR+AA+SVA RVA E G G VGY +R + +EKT L + T G+LLR+L+G+
Sbjct: 457 PRRVAAMSVAARVAQEMG----GKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGE 512
Query: 734 RNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRY 793
+L + IIVDE HER+L D L ++KD+ R LK+++ SAT+DA FS +
Sbjct: 513 PDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPD-----LKLLISSATMDAEKFSDF 567
Query: 794 FGHCPVVTAEGRTHPVTTSF 813
F P+ GR +PV F
Sbjct: 568 FDQAPIFRFPGRRYPVDICF 587
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 213/468 (45%), Gaps = 74/468 (15%)
Query: 921 GAILVFLPGVSEINNLYDKLVASHQFGGQSSDW----VIPLHSSVASTEQKRVFLRPPGN 976
G +LVFLPG EI + + L H+ G + + P+++++ S Q ++F P
Sbjct: 613 GDVLVFLPGQEEIEAVEENL--KHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEG 670
Query: 977 IRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXX 1036
RKVV+ATNIAETS+TID + YV+D G K + + S++ IS
Sbjct: 671 ARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRA 730
Query: 1037 XXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPP 1096
PG C+ LYT + + VPE+ R L + L +K L + ++ F + ++PP
Sbjct: 731 GRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFMDPP 788
Query: 1097 KNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVS 1156
+EA+ ++ LL+ +GAL LT G +A+ P+D ++ KM++ + C I+S++
Sbjct: 789 PSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIA 848
Query: 1157 AFLSY-KSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKI 1215
A LS S F PKD++ + + A+ N+ + G DH+ +K Y W
Sbjct: 849 AMLSIGPSIFYRPKDKQVHADN---AMKNFHVGNVG---------DHIAFLKIYNSW--- 893
Query: 1216 LNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLD 1275
K T + Q+C ++ M R++R Q L L+
Sbjct: 894 ---KETNYSTQWCYENYIQVRSMKRARDIRDQLEGL----------------------LE 928
Query: 1276 SVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTL 1335
V D S N S+ K+I+ AG +P+ A ++ + ++K +
Sbjct: 929 RVEIDVSSNAN---ELDSIRKSIV-AGFFPHTAKLQKN---GSYRTVKHPQT-------- 973
Query: 1336 WFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISP 1383
VH+HP+S S ++V+ + V T+K ++R + + P
Sbjct: 974 -------VHIHPASGLSQVLP---RWVVYHQLVLTSKEYMRQVTELKP 1011
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein
| chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 130/207 (62%), Gaps = 15/207 (7%)
Query: 608 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 667
+++ + R +LPI + +L+ ++E+ VLV+ G+TGSGKTTQ+PQ++ E+G
Sbjct: 395 EELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH----EAGYTKRG 450
Query: 668 NIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRLDSAKNEKTKLLFCTTGIL 726
+ CTQPRR+AA+SVA RVA E G++ G VGY +R + ++KT L + T G+L
Sbjct: 451 KVGCTQPRRVAAMSVAARVAQEM-----GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 505
Query: 727 LRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVD 786
LR+L+G+ +L + +IVDE HER+L D L ++KD+ R LK+++ SAT+D
Sbjct: 506 LRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPD-----LKLLISSATMD 560
Query: 787 ATLFSRYFGHCPVVTAEGRTHPVTTSF 813
A FS YF P+ + GR +PV ++
Sbjct: 561 AEKFSDYFDTAPIFSFPGRRYPVEINY 587
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 216/489 (44%), Gaps = 76/489 (15%)
Query: 900 DVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDW----VI 955
D +D ++ L + E G+ ILVF G EI + + H+ G + +
Sbjct: 594 DYMDAAIVTILTIHVREPLGD--ILVFFTGQEEIETAEE--ILKHRIRGLGTKIRELIIC 649
Query: 956 PLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMK 1015
P+++++ S Q ++F P RKVV+ATNIAETS+TID + YV+D G K +
Sbjct: 650 PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 709
Query: 1016 LSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCL 1075
+ S++ IS PG C+ LYT + + VPE+ R L + L
Sbjct: 710 MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 769
Query: 1076 QIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVL 1135
+K L + + F + ++PP EA+ ++ LL+ +GAL LT G +A+ P+D +
Sbjct: 770 ALKSLGIHDLINF--DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPM 827
Query: 1136 IGKMMLYGAIFGCLSPILSVSAFLSYKSPFIY-PKDEKQNVERAKLALLNYKIDGSGDTN 1194
+ KM++ + C I+S++A LS Y PKD++ + + A+ +N+ G
Sbjct: 828 LSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNAR---MNFHTGNVG--- 881
Query: 1195 DMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLAD 1254
DH+ ++K Y W K T + Q+C ++ M R++R Q L
Sbjct: 882 ------DHIALLKVYSSW------KETNFSTQWCYENYIQVRSMKRARDIRDQLEGL--- 926
Query: 1255 IGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGI 1314
L+ V D S N SV K+I+ AG +P+ A ++
Sbjct: 927 -------------------LERVEIDISSNLN---ELDSVRKSIV-AGFFPHTAKLQKN- 962
Query: 1315 VAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVF 1374
+ ++K + VH+HP NS ++V+ E V T+K +
Sbjct: 963 --GSYRTVKHPQT---------------VHIHP---NSGLSQVLPRWVVYHELVLTSKEY 1002
Query: 1375 LRDTSVISP 1383
+R + + P
Sbjct: 1003 MRQVTELKP 1011
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 130/207 (62%), Gaps = 15/207 (7%)
Query: 608 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 667
+++ + R +LPI + +L+ ++E+ VLV+ G+TGSGKTTQ+PQ++ E+G
Sbjct: 385 EELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH----EAGYTKRG 440
Query: 668 NIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRLDSAKNEKTKLLFCTTGIL 726
+ CTQPRR+AA+SVA RVA E G++ G VGY +R + ++KT L + T G+L
Sbjct: 441 KVGCTQPRRVAAMSVAARVAQEM-----GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 495
Query: 727 LRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVD 786
LR+L+G+ +L + +IVDE HER+L D L ++KD+ R LK+++ SAT+D
Sbjct: 496 LRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPD-----LKLLISSATMD 550
Query: 787 ATLFSRYFGHCPVVTAEGRTHPVTTSF 813
A FS YF P+ + GR +PV ++
Sbjct: 551 AEKFSDYFDTAPIFSFPGRRYPVEINY 577
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 216/489 (44%), Gaps = 76/489 (15%)
Query: 900 DVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDW----VI 955
D +D ++ L + E G+ ILVF G EI + + H+ G + +
Sbjct: 584 DYMDAAIVTILTIHVREPLGD--ILVFFTGQEEIETAEE--ILKHRIRGLGTKIRELIIC 639
Query: 956 PLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMK 1015
P+++++ S Q ++F P RKVV+ATNIAETS+TID + YV+D G K +
Sbjct: 640 PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 699
Query: 1016 LSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCL 1075
+ S++ IS PG C+ LYT + + VPE+ R L + L
Sbjct: 700 MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 759
Query: 1076 QIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVL 1135
+K L + + F + ++PP EA+ ++ LL+ +GAL LT G +A+ P+D +
Sbjct: 760 ALKSLGIHDLINF--DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPM 817
Query: 1136 IGKMMLYGAIFGCLSPILSVSAFLSYKSPFIY-PKDEKQNVERAKLALLNYKIDGSGDTN 1194
+ KM++ + C I+S++A LS Y PKD++ + + A+ +N+ G
Sbjct: 818 LSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNAR---MNFHTGNVG--- 871
Query: 1195 DMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLAD 1254
DH+ ++K Y W K T + Q+C ++ M R++R Q L
Sbjct: 872 ------DHIALLKVYSSW------KETNFSTQWCYENYIQVRSMKRARDIRDQLEGL--- 916
Query: 1255 IGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGI 1314
L+ V D S N SV K+I+ AG +P+ A ++
Sbjct: 917 -------------------LERVEIDISSNLN---ELDSVRKSIV-AGFFPHTAKLQKN- 952
Query: 1315 VAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVF 1374
+ ++K + VH+HP NS ++V+ E V T+K +
Sbjct: 953 --GSYRTVKHPQT---------------VHIHP---NSGLSQVLPRWVVYHELVLTSKEY 992
Query: 1375 LRDTSVISP 1383
+R + + P
Sbjct: 993 MRQVTELKP 1001
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 11/215 (5%)
Query: 604 SQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILD--DMIES 661
SQRY D+ + R TLP+ K + L+ L N L++ GETGSGKTTQ+PQF++D D S
Sbjct: 48 SQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETS 107
Query: 662 GLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFC 721
+ CTQPRR+AA+SV+ RVA+E G VGY +R + + +T L +
Sbjct: 108 DKRRKWLVGCTQPRRVAAMSVSRRVAEE----MDVTIGEEVGYSIRFEDCSSPRTVLKYL 163
Query: 722 TTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILM 781
T G+LLR+ M D L II+DE HER+L D L +LK++++ R LK+++M
Sbjct: 164 TDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRP-----DLKLVVM 218
Query: 782 SATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLED 816
SAT++A F YF P++ GR HPV + ++
Sbjct: 219 SATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQE 253
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 223/491 (45%), Gaps = 81/491 (16%)
Query: 905 DLLEDLICFIDETH---GEGAILVFLPGVSEINNLYDKLVAS-HQFGGQSSDW-VIPLHS 959
D LE I + + H G ILVFL G EI + K+ G Q V+PL+S
Sbjct: 257 DYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYS 316
Query: 960 SVASTEQKRVFLR---------PPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGS 1010
++ Q+++F PPG RK+V++TNIAETS+TID +VYVID G K+
Sbjct: 317 TLPPAMQQKIFDPAPEPVTEGGPPG--RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 374
Query: 1011 YAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPL 1070
++++ S++ IS +PG CF LYT F ++P PE+LR L
Sbjct: 375 NPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 434
Query: 1071 VELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKL 1130
L +K L + + F + ++PP E + A+ +L +GAL+ D LT G +++
Sbjct: 435 ANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEF 492
Query: 1131 PVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGS 1190
P+D + KM++ F C + ILSVSA LS + FI P++ ++ + AK + I+G
Sbjct: 493 PLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGH--IEG- 549
Query: 1191 GDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGT 1250
DHL ++ Y + K +C F+++ M + +R Q
Sbjct: 550 ----------DHLTLLNVYHAF------KQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593
Query: 1251 LLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAG 1310
+++ L +C S FN ++ ++ KA+L AG + VA
Sbjct: 594 IMSRFNL-------------------KMC--STDFNSRDYYINIRKAML-AGYFMQVAHL 631
Query: 1311 EQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVET 1370
E+ +G L + VH+HP SN + ++++ E V T
Sbjct: 632 ER------------------TGHYLTVKDNQVVHLHP----SNCLDHKPEWVIYNEYVLT 669
Query: 1371 NKVFLRDTSVI 1381
++ F+R + I
Sbjct: 670 SRNFIRTVTDI 680
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 20/231 (8%)
Query: 586 MKEMESAELRKAQG--NKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETG 643
++E AE K +G +K +++ ++ +F LPI + ++L+L++EN VLV+ GETG
Sbjct: 185 VEESSEAETGKHRGCYSKTAAEKAREGREF---LPIHGYREELLKLIEENQVLVIVGETG 241
Query: 644 SGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLV 702
SGKTTQ+PQ++ E+G I CTQPRR+AA+SVA RVA E G++ G V
Sbjct: 242 SGKTTQIPQYLQ----EAGYTKRGKIGCTQPRRVAAMSVASRVAQE-----VGVKLGHEV 292
Query: 703 GYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLK 762
GY +R + +EKT + + T G+LLR+L+ + L + II+DE HER+L D L ++K
Sbjct: 293 GYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVK 352
Query: 763 DLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSF 813
D+ + R L++I+ SAT++A FS YF + GR +PV F
Sbjct: 353 DVAKVRP-----DLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLF 398
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 905 DLLEDLI---CFIDETHGEGAILVFLPGVSEINNLYDKLVASHQ-FGGQSSDWVI-PLHS 959
D LE +I I +T G ILVFL G EI + L G + S+ +I P++S
Sbjct: 405 DYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYS 464
Query: 960 SVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSV 1019
++ + Q +VF P RKVV+ATNIAETS+TID V YVID G K N + + S+
Sbjct: 465 NLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESL 524
Query: 1020 VDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKL 1079
+ IS PG CF LY E P +PE+ R L + L +K
Sbjct: 525 LVTPISKASAAQRAGRSGRTGPGKCFRLYNIKDLE----PTTIPEIQRANLASVVLTLK- 579
Query: 1080 LSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALE 1115
SLG F + ++PP A+ A+ LLY +GAL+
Sbjct: 580 -SLGIQDVFNFDFMDPPPENALLKALELLYALGALD 614
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 135/242 (55%), Gaps = 51/242 (21%)
Query: 608 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 667
Q +++ R +LPIA+++ +++ +++ND+L++ GETGSGKTTQ+PQF+ + G C
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYN-------AGFC 84
Query: 668 N----IVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTT 723
I TQPRRIAA++VA+RVA+E CE G + VGY +R D + T+L + T
Sbjct: 85 REGKMIGITQPRRIAAVTVAKRVAEE-CEVQLGQK---VGYSIRFDDTTSGSTRLKYMTD 140
Query: 724 GILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTK-------- 775
G+LLR+ + D +L+ + IIVDE H+RS+ D LL +LK + RS S K
Sbjct: 141 GLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVAS 200
Query: 776 ----------------------------LKVILMSATVDATLFSRYFGHCPVVTAEGRTH 807
LK+I+MSA++DA +FS YFG V +GR
Sbjct: 201 QVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQF 260
Query: 808 PV 809
PV
Sbjct: 261 PV 262
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 211/491 (42%), Gaps = 77/491 (15%)
Query: 905 DLLEDLICFIDETHGE---GAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPL--HS 959
D ++ + I + H E G ILVFL G EI ++ + Q + ++PL S
Sbjct: 273 DYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFS 332
Query: 960 SVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSV 1019
++ S +Q +VF P RKV++ATNIAETSITI + YVID G K + S+
Sbjct: 333 ALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESL 392
Query: 1020 VDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKL 1079
S PG F LY FE+L + PE+ R L + LQ+K
Sbjct: 393 DVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTK-PEIKRCNLSNIILQLKA 451
Query: 1080 LSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVL-TPLGHHLAKLPVDVLIGK 1138
L + I F + ++ P A+ A++ L+ +GAL D L P+G+ +++LP++ + K
Sbjct: 452 LGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSK 509
Query: 1139 MMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDR 1198
++ F CL +L A LS +S F P+++++ +K N+ G
Sbjct: 510 ALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSK----NHFASVEG------- 558
Query: 1199 QSDHLLMMKAYEKWEKILNQKGT--------KAAQQFCNSYFLSSSVMLTIREMRVQFGT 1250
DHL + Y + ++ L ++ K +++C +++S + R++ Q
Sbjct: 559 --DHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIRE 616
Query: 1251 LLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAG 1310
+ IG FN+ S + +L C
Sbjct: 617 HVEQIG----------------------------FNVSSCGNDMLAFRRC---------- 638
Query: 1311 EQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVET 1370
+AA+ +++ G + VH+HP+S+ K ++F E ++T
Sbjct: 639 ----LAASF--FLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKP---ECVIFNELMQT 689
Query: 1371 NKVFLRDTSVI 1381
+K ++++ ++I
Sbjct: 690 SKKYIKNLTII 700
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 13/200 (6%)
Query: 610 MSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNI 669
M++ R LPI +++ ++LQ+++EN V+VV GETGSGKTTQ+ Q++ +D G + +
Sbjct: 551 MAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHED----GYTINGIV 606
Query: 670 VCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRK 729
CTQPRR+AA+SVA+RV++E G +GY +R + T + + T G+LLR+
Sbjct: 607 GCTQPRRVAAMSVAKRVSEE----METELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRE 662
Query: 730 LMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATL 789
+ D +L +++DE HERSL D L +LK +V +R K+I+ SAT++A
Sbjct: 663 TLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRR-----DFKLIVTSATLNAQK 717
Query: 790 FSRYFGHCPVVTAEGRTHPV 809
FS +FG P+ GRT PV
Sbjct: 718 FSNFFGSVPIFNIPGRTFPV 737
Score = 144 bits (362), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 219/498 (43%), Gaps = 74/498 (14%)
Query: 899 EDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEIN----NLYDKL--VASHQFGGQSSD 952
ED ++ + + + I T G IL+F+ G EI +L +++ + S ++
Sbjct: 747 EDYVEAAVKQAMTIHI--TSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNL 804
Query: 953 WVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYA 1012
++P++S + + Q ++F +P RK ++ATNIAETS+T+D + YVID G K
Sbjct: 805 LILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNP 864
Query: 1013 QMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVE 1072
+M + ++ IS PG C+ LYT + M P VPE+ R L
Sbjct: 865 RMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGN 924
Query: 1073 LCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1132
+ L +K L + ++ F + ++PP E + ++ L+ +GAL LT LG + + P+
Sbjct: 925 VVLLLKSLKIDNLLDF--DFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPL 982
Query: 1133 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1192
D + KM+L G C+ +L++ + LS S F PK+ + + A+
Sbjct: 983 DPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFV-------- 1034
Query: 1193 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1252
+SDHL ++ Y++W K + +G +CN ++L + RE+R Q L
Sbjct: 1035 -----PESDHLTLLNVYQQW-KEHDYRG-----DWCNDHYLQVKGLRKAREVRSQ----L 1079
Query: 1253 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1312
DI L L + + G + +C A Y H+S+ LK + G Y N G
Sbjct: 1080 LDI-LKQLKIELRSCGPDWDIVRKAICSA------YFHNSARLKGV---GEYVNCRTG-- 1127
Query: 1313 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK 1372
H+HPSS + ++V+ E + T K
Sbjct: 1128 ----------------------------MPCHLHPSSALYGL-GYTPDYVVYHELILTTK 1158
Query: 1373 VFLRDTSVISPYSILLFG 1390
+++ + + P+ + G
Sbjct: 1159 EYMQCATSVEPHWLAELG 1176
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 207/466 (44%), Gaps = 51/466 (10%)
Query: 920 EGAILVFLPGVSEINNLYDKL---VASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGN 976
EG IL+F+ G +I L +L V S G + PLH S+ Q RVF PP N
Sbjct: 213 EGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPN 272
Query: 977 IRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXX 1036
R+ +++TNIAETS+T+D VVYVID G K+ + S+ IS
Sbjct: 273 CRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRA 332
Query: 1037 XXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPP 1096
+PG C+ LY + +PE+ R L L +K L L I + L+ P
Sbjct: 333 GRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAP 392
Query: 1097 KNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVS 1156
+E+++ A+ LY + A++ + +T +G ++ LP++ + + ++ GCLS L+V
Sbjct: 393 SSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVV 452
Query: 1157 AFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKIL 1216
A LS ++ + P K + ++ K + +GSG DH+ +++ +E W++
Sbjct: 453 AMLSAETTLL-PARSKPSEKKRKHDEDSNLPNGSG-------YGDHIQLLQIFESWDR-- 502
Query: 1217 NQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDS 1276
T +C + M+ ++++R Q ++ I L + DG+K + D
Sbjct: 503 ----TNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRL--EVGADGRKSSSRDD 556
Query: 1277 VLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLW 1336
Y L+ LC G +A + N Y RTL
Sbjct: 557 -----------YRK----LRKALCVGNANQIAE-------------RMLRHNGY--RTLS 586
Query: 1337 FDGRREVHVHPSSINSNTKAFQYP-FIVFLEKVETNKVFLRDTSVI 1381
F + V VHPSS+ S P ++V+ E + T + F+R+ +
Sbjct: 587 FQSQL-VQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAV 631
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 12/195 (6%)
Query: 615 ATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQP 674
A LPI + I++ +++N V+V+ GETGSGK+TQ+ Q + G I TQP
Sbjct: 2 ANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQI----LHRHGYTKSGVIAITQP 57
Query: 675 RRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDR 734
RR+AA+SVA RVA E P G VGY +R + KT++ + T G+LLR+ + +
Sbjct: 58 RRVAAVSVARRVAQELDVP----LGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNP 113
Query: 735 NLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYF 794
L + II+DE HERSL D LL ++K LV R ++ KV++ SAT+D S +F
Sbjct: 114 MLDDYSVIILDEAHERSLNTDILLGLVKRLVRIR----ASNFKVLITSATLDGEKVSEFF 169
Query: 795 GHCPVVTAEGRTHPV 809
CPV+ G+ +PV
Sbjct: 170 SGCPVLNVPGKLYPV 184
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 12/206 (5%)
Query: 608 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 667
++ + LPI A + IL+ + ++V+ GETGSGK+TQ+ QF+ D SG+
Sbjct: 297 RECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLAD----SGVAASE 352
Query: 668 NIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILL 727
+IVCTQPR+IAA+++A+RV R E S + + V S + +K+++ T LL
Sbjct: 353 SIVCTQPRKIAAMTLADRV---REESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLL 409
Query: 728 RKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDA 787
+ M DR+L+GI+ +I+DE HERSL D LL +LK L+ +R L++++MSAT DA
Sbjct: 410 QHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRR-----IDLRLVIMSATADA 464
Query: 788 TLFSRYFGHCPVVTAEGRTHPVTTSF 813
S+YF C ++ GR PV +
Sbjct: 465 KQLSQYFFSCGILLVNGRNFPVEIVY 490
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 147/320 (45%), Gaps = 40/320 (12%)
Query: 914 IDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRP 973
I +T EG IL FL +E+ ++ + S +PLH ++ EQ RVF
Sbjct: 518 IHKTEKEGTILAFLTSQAEVEWACERFITP-------SAIALPLHGKLSFEEQFRVFQNH 570
Query: 974 PGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXX 1033
PG RKV+ ATNIAETS+TI V YVID G KE+ + +S + +S
Sbjct: 571 PGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
Query: 1034 XXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEAL 1093
+PG C+ LY+++ F+ M Q PE+ R+ L L++ L + +I F +
Sbjct: 630 GRAGRTEPGRCYRLYSKNDFDS-MNLNQEPEIRRVHLGVALLRMLALGVNNIAEF--NFV 686
Query: 1094 EPPKNEAMDTAVSLLYEVGAL---EGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS 1150
+ P EA+ AV L ++GA+ G LT GH L KL ++ +GK++L GC
Sbjct: 687 DAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLIL-----GCFR 741
Query: 1151 PILS----VSAFLSYKSPFIYPK----DEKQNVERAKLALLNYKIDGSGDTNDMDRQSDH 1202
+ V A + + I+ + D+K +R K+ N + D
Sbjct: 742 HRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCN-------------QNGDL 788
Query: 1203 LLMMKAYEKWEKILNQKGTK 1222
++ Y++W + ++ K
Sbjct: 789 FTLLSVYKEWASLPRERRNK 808
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 617 LPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRR 676
LPI A + IL+ + ++V+ GETGSGK+TQ+ QF+ D SG+ +IVCTQPR+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLAD----SGVAASESIVCTQPRK 358
Query: 677 IAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNL 736
IAA+++ +RV R E S + + V S + +K+++ T LL+ M DR+L
Sbjct: 359 IAAMTLTDRV---REESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSL 415
Query: 737 TGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGH 796
+GI+ +I+DE HERSL D L + ++ L++++MSAT DA S+Y
Sbjct: 416 SGISCVIIDEAHERSLNTD-----LLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFD 470
Query: 797 CPVVTAEGRTHPVTTSF 813
C ++ GR PV +
Sbjct: 471 CGILHVNGRNFPVEIVY 487
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 147/320 (45%), Gaps = 40/320 (12%)
Query: 914 IDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRP 973
I +T EG IL FL +E+ ++ VA S +PLH ++ EQ VF
Sbjct: 515 IHKTEKEGTILAFLTSQAEVEWACERFVAP-------SAIALPLHGKLSFEEQFMVFQNY 567
Query: 974 PGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXX 1033
PG RKV+ ATNIAETS+TI V YVID G KE+ + +S + +S
Sbjct: 568 PGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRA 626
Query: 1034 XXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEAL 1093
+PG C+ LY++ F+ M Q PE+ R+ L L++ L + +I F E +
Sbjct: 627 GRAGRTEPGRCYRLYSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAF--EFV 683
Query: 1094 EPPKNEAMDTAVSLLYEVGAL---EGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS 1150
+ P EA+ A+ L ++GA+ G LT GH L KL ++ +GK++L GC
Sbjct: 684 DAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLIL-----GCFR 738
Query: 1151 PILS----VSAFLSYKSPFIYPK----DEKQNVERAKLALLNYKIDGSGDTNDMDRQSDH 1202
+ V A + + I+ + D+K +R K+ N D D+
Sbjct: 739 HRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCN-------DNGDL------ 785
Query: 1203 LLMMKAYEKWEKILNQKGTK 1222
++ Y++W + + K
Sbjct: 786 FTLLSVYKEWASLPRDRRNK 805
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 108/182 (59%), Gaps = 19/182 (10%)
Query: 615 ATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQP 674
A+LPI A+K I+ + EN V ++ GE G GK++QVPQF+L+ I+CTQP
Sbjct: 24 ASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLE-------ANMAPILCTQP 76
Query: 675 RRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDR 734
RR A ++VA+ VA R + L G +GY + E +K+LF T G+LL +++ D+
Sbjct: 77 RRFAVVAVAKMVAKSR---NSDLGGE-IGYHIGHSKILTEGSKILFKTAGVLLDEML-DK 131
Query: 735 NLTGITH--IIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSR 792
L + + II+DEVHERS+ D +L+ +K + K + L+V+LMSAT D T +
Sbjct: 132 GLNALKYKVIILDEVHERSVESDLVLVCVKQFLMK-----NNDLRVVLMSATADITRYRD 186
Query: 793 YF 794
YF
Sbjct: 187 YF 188
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 37/333 (11%)
Query: 905 DLLEDLICFIDETHG--EGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVA 962
+L+ DLI +I E E +ILVFLP + Y +L +S V LH S+
Sbjct: 253 NLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFF-----ASFEVHILHRSI- 306
Query: 963 STEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDD 1022
TEQ ++ + RKV++ATNIAE+S+TI V YVID R + K +V
Sbjct: 307 DTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLV 366
Query: 1023 WISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLL-- 1080
W+S G + L F +L ++ P +L++ L + L I
Sbjct: 367 WVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKL-EEHEPPSILKLSLRQQVLHICCTES 425
Query: 1081 -SLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGAL----EGDEVLTPLGHHLAKLPV--- 1132
++ L++A++PP + +D A+ +L + AL G T G LA P+
Sbjct: 426 RAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFD 485
Query: 1133 -DVLIGK-----MMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYK 1186
+L+ K M+ G + G L L + P +P + + L +++
Sbjct: 486 ASILVVKFGEMGMLRQGILLGVLMDTLPL--------PIHHPFGD----DSLFLEYVDHY 533
Query: 1187 IDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQK 1219
GS + R+ + A++ W+++ K
Sbjct: 534 FGGSKTISGGRREMVLMANFCAFQFWQRVFKDK 566
>AT5G14900.1 | Symbols: | helicase associated (HA2) domain-containing
protein | chr5:4822676-4823581 REVERSE LENGTH=301
Length = 301
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 68/315 (21%)
Query: 1070 LVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAK 1129
L L +K LS+ ++ F + ++ P + + A+ LY +GAL+ D LT G +++
Sbjct: 4 LANTVLTLKGLSVKNLVRF--DLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 1130 LPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQN-VERAKLALLNYKID 1188
P+D + KM++ F C + ILS+SA LS + FI P+ E Q + AK + + ID
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAH--ID 119
Query: 1189 GSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQF 1248
G DHL ++ + + + NQ +F N + S+V ++RE V+
Sbjct: 120 G-----------DHLTLLNLFHAFLQN-NQDPNWCCTKFINYRAMKSAV--SVREQLVRI 165
Query: 1249 GTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVA 1308
+ + LC S FN ++ ++ KA+L AG + VA
Sbjct: 166 ----------------------MLRFQIKLC--SPDFNSRDYYVNIRKALL-AGYFMQVA 200
Query: 1309 AGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRRE--VHVHPSSINSNTKAFQYPFIVFLE 1366
E+ +G L F + + VH+HP SN + ++V+ E
Sbjct: 201 HLER------------------TGHYLTFRDKDDQVVHLHP----SNCLDHKPEWVVYNE 238
Query: 1367 KVETNKVFLRDTSVI 1381
V T++ F+R + I
Sbjct: 239 YVFTSRNFIRTVTHI 253