Miyakogusa Predicted Gene
- Lj0g3v0195829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0195829.1 Non Chatacterized Hit- tr|B9SSN0|B9SSN0_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus
commun,63.8,0,seg,NULL; DEAD-like helicases superfamily,Helicase,
superfamily 1/2, ATP-binding domain; helicase su,CUFF.12410.1
(1522 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 1578 0.0
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 1303 0.0
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 588 e-168
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 545 e-155
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 545 e-155
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 540 e-153
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 538 e-152
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 252 1e-66
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 238 3e-62
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 160 1e-38
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 159 1e-38
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 158 2e-38
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 157 7e-38
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 156 1e-37
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 156 1e-37
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 155 3e-37
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 149 2e-35
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 149 2e-35
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 148 2e-35
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 141 4e-33
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 126 1e-28
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 119 2e-26
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 116 2e-25
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 107 7e-23
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 70 8e-12
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 1578 bits (4087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 837/1457 (57%), Positives = 1009/1457 (69%), Gaps = 93/1457 (6%)
Query: 75 IYEKLSCEGFTNHHIELALSVLKDAATFESALDWLCLNLPSDELPLKFSTGASSF-DKGG 133
+YEKLSCEGF + IELALS L+D ATFE+ALDWLCLNLPS ELP+KFSTGAS F GG
Sbjct: 78 VYEKLSCEGFVDDQIELALSSLRDGATFEAALDWLCLNLPSHELPVKFSTGASRFPSTGG 137
Query: 134 SVGVVVFQNSXXXXXXXXXXXXXXXXXXXXXXXQFLIKRRQLNDXXXXXLDSSFQKSQAD 193
SVGV+ S +K +Q + SS + SQAD
Sbjct: 138 SVGVI----STSRDDWNDSTDSSVRVEEEEPAVFVRVKGKQDEEDTL----SSDKSSQAD 189
Query: 194 WIKQYVQQQXXXXXXXXXXXXXYDFNCGARSNRIKQQPRSYDVIXXXXXXXXXXXXXXXX 253
WI+QY+ +Q G PR +DVI
Sbjct: 190 WIRQYMMRQEEEELECWEDEVD-----GIDPRNKVSGPRPFDVIAKEYYSARSDAIKAKE 244
Query: 254 KGDKKQKEQAGIVIRELKQEMSALGLSXXXXXXXXXXXHGKISSDPASERGNEPFDCVGD 313
K DK+ +EQAG+ IR+LKQE+S LGLS H + + A+E+ E + D
Sbjct: 245 KRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREH---AFESATEQ--ESTCPISD 299
Query: 314 NTPCDVGGDSVVALPSDGKLXXXXXXXXXXHSKEENLHVERDSAKGE--------GGDIE 365
N V D V D L S+E S+ G+ D+E
Sbjct: 300 NLHESVDADDVSVQMLDN-LTLNTNPAESYESEEIQTKALPSSSSGQDFVASDEDSEDVE 358
Query: 366 LGGFFMEDVPSNEMLKAQKQEKIKRLSETKDSRKEEDPHVERDSAXXXXXXXXXXXXFME 425
LG F E++P +E+ PH
Sbjct: 359 LGDTFFEEIPPSEI----------------------SPH--------------------- 375
Query: 426 DEASNEKLASDILKAQKQEKIKRXXXXXXXXXXXDGIWKKGDPQKSPKAILHQMCQRSGW 485
++L+ QK+EK+ R DGIWKKG+ QK PKA LHQ+CQRSGW
Sbjct: 376 ----------ELLELQKEEKM-RELRSEKNLGKLDGIWKKGEAQKIPKAFLHQLCQRSGW 424
Query: 486 DAPKFNKVLGRGKSFSYTVSILRKASGRGKSRKAGGLVTFQLPDQNETFESAEDAQNKVA 545
+APKFNK G G++FSYTVSILRKASGRGK+R+AGGLVT QLP ++E FES EDAQNKVA
Sbjct: 425 EAPKFNKETGEGRNFSYTVSILRKASGRGKNRQAGGLVTLQLPPKDENFESIEDAQNKVA 484
Query: 546 AYALFQLFPDTPVHLPITEPYASFVIKLMEGES-STKLEDSEEDHRSRFVDSLLLGNGSG 604
A+AL +LF D PVH ITEPYAS V+ + E T ++ +EED R+ FVD LL +
Sbjct: 485 AFALHKLFSDLPVHFAITEPYASLVLIWKQEELLCTTIQSTEEDRRANFVDKLLEEDSFS 544
Query: 605 ETASVDVTDCKPP--ESFVRQDENKNSTHSSPQPFSQREIHMKEMESAELRKAQGNKMRS 662
T S + P +S+V+ ++ S+ + ++R+ ++ E E L++ Q NK R+
Sbjct: 545 LTTSSSSFENSLPLVDSYVKDKDDLGVVKSNNR--AKRDSYI-EAECLSLQRKQENKKRT 601
Query: 663 QRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLG 722
Q+Y+DM K R LPI+ +K ILQ LKE DVLVVCGETGSGKTTQVPQFILDDMI+SG G
Sbjct: 602 QKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHG 661
Query: 723 GHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTG 782
G+CNI+CTQPRRIAAISVA+RVADERCE SPGL SLVGYQVRL+SA+++KT+LLFCTTG
Sbjct: 662 GYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTG 721
Query: 783 ILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTE-SSTKLKVILMSA 841
ILLRKL GDR L +THIIVDEVHERSLLGDFLLI+LK L+EK+S + +S KLKVILMSA
Sbjct: 722 ILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSA 781
Query: 842 TVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQN 901
TVDA LFSRYFGHCPV+TA+GRTHPVTT FLE+IY+ INY LA DSPA+L K
Sbjct: 782 TVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIK--- 838
Query: 902 SQKGSVTNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVID 961
+ GSV + RGKKNLVL+GWGD+ LLSE+ NP++V SNY SYS+Q QQNLKRLNED ID
Sbjct: 839 DKLGSVNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRID 898
Query: 962 YDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVAS 1021
Y+LLE+LIC ID+T EGAIL+FLPGV+EI L D L AS++F G ++DW++PLHSS+AS
Sbjct: 899 YELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIAS 958
Query: 1022 TEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDW 1081
+EQ++VFLRPP +RKV+ ATNIAETSITIDDVVYVID G+ KEN Q KLSS+V+DW
Sbjct: 959 SEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDW 1018
Query: 1082 ISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLG 1141
IS VKPGICF LYTR+RFE+LMRPYQVPEMLRMPLVELCLQIKLL LG
Sbjct: 1019 ISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLG 1078
Query: 1142 HIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYG 1201
HIKPFLS ALEPP AM +A+SLL+EVGA+EGDE LTPLGHHLAKLPVDVLIGKM+LYG
Sbjct: 1079 HIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYG 1138
Query: 1202 AIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHL 1261
IFGCLSPILS++AFLSYKSPFIYPKDEKQNV+R KLALL+ S D N+ DRQSDHL
Sbjct: 1139 GIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHL 1198
Query: 1262 LMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKD 1321
LMM AY+KW KIL ++G KAAQ+FC S FLSSSVM IR+MRVQFGTLLADIGLI+LPK
Sbjct: 1199 LMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKT 1258
Query: 1322 YQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLK 1381
+ G+K LD D +QPFN+YS V+KAILCAGLYPN+AA ++GI T +SL
Sbjct: 1259 GEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLT 1318
Query: 1382 RSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISP 1441
+ N + W+DGRREVH+HPSSINSN KAFQ PF+VFLEKVETNKV+LRDT+++SP
Sbjct: 1319 K-QGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1377
Query: 1442 YSILLFGGSINVQHQTGLVAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIV 1501
+SILLFGGSINV HQ+G V IDGWLK+ APAQ AVLFKELRL LHSILK+LIRKPE + +
Sbjct: 1378 FSILLFGGSINVHHQSGSVTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRKPEKSGI 1437
Query: 1502 VNNEIIKSIINLLLEEG 1518
V+NE++KS+++LL+EEG
Sbjct: 1438 VHNEVVKSMVHLLIEEG 1454
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 1303 bits (3372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/1088 (61%), Positives = 825/1088 (75%), Gaps = 41/1088 (3%)
Query: 436 DILKAQKQEKIKRXXXXXXXXXXXDGIWKKGDPQKSPKAILHQMCQRSGWDAPKFNKVLG 495
++L+ QK+E I R +GIWKKG+ QK PKA+LHQ+CQRSGW APKFNKV G
Sbjct: 361 ELLELQKKE-IMRELCNEKHLTKLNGIWKKGEAQKIPKALLHQLCQRSGWIAPKFNKVTG 419
Query: 496 RGKSFSYTVSILRKASGRGKSRKAGGLVTFQLPDQNETFESAEDAQNKVAAYALFQLFPD 555
G++FSYT S++RK+SG GKSR+AGGLVT QLP Q E FES +DAQN+VAA+AL +LF D
Sbjct: 420 EGRNFSYTTSVMRKSSGFGKSRQAGGLVTIQLPHQVEDFESIQDAQNRVAAFALHKLFSD 479
Query: 556 TPVHLPITEPYASFVIKLMEGESSTKLEDSEEDHRSRFVDSLLLG-NGSGETASVDVTDC 614
PVH ITEPYAS V+ + + E S + EE R +FV+SLL N S T S +
Sbjct: 480 LPVHFAITEPYASLVL-IWKQEESLGITSREEQRREKFVESLLEADNFSLTTTSRGIHSA 538
Query: 615 KP-PESFVRQDENKNSTHSSPQPFSQREIHMKEMESAELRKAQGNKMRSQRYQDMSKFRA 673
P +S V+++++ + S+ + ++R M E + L++ Q NK + Q+Y+DM K RA
Sbjct: 539 LPMVDSCVKENDDLDVVKSNHR--ARRNSSMA-AECSSLKQKQENKKKMQKYKDMLKTRA 595
Query: 674 TLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPR 733
LPI+ +K DILQ LKE DVLVVCGETGSGKTTQVPQFILDDMI+SG GG+CNI+CTQPR
Sbjct: 596 ALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR 655
Query: 734 RIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRN 793
AI+VA+RVADERCEP PG S+V YQVR +A+++KT+LLFCTTGILLRKL+GD
Sbjct: 656 ---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTT 712
Query: 794 LTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESST-KLKVILMSATVDATLFSRYF 852
L +THIIVDEVHERSL+GDFLLI+LK L+EK+S +++ KLKVILMSATVDA FSRYF
Sbjct: 713 LKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYF 772
Query: 853 GHCPVVTAEGRTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRG 912
G CP++TA+GRTHPVTT FLEDIY++ Y LASDSPA+L+ + GSV RG
Sbjct: 773 GQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSD---TSITDKLGSVNVPRG 829
Query: 913 KKNLVLSGWGDESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFI 972
KKNL+L+GWGD L+SE+S N ++Y S +K + V+DYDLLE+LIC I
Sbjct: 830 KKNLMLAGWGDSYLVSEDSLN-----TSYDS--------IKYIASAVVDYDLLEELICHI 876
Query: 973 DETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPP 1032
D+T EGAILVFLPG+SEIN L ++L AS++F G S DW++PLHSS+ASTEQK+VFLRPP
Sbjct: 877 DDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPP 936
Query: 1033 GNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXX 1092
IRKV+IATNIAETSITI+DVVYVID G+ KEN KLSS+V+DW+S
Sbjct: 937 KGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMG 996
Query: 1093 XXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALE 1152
VKPG CF LYTRHRFE+LMRPYQVPEMLR+PLVELCL IKLL LG IKPFLS+ALE
Sbjct: 997 RAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALE 1056
Query: 1153 PPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILS 1212
PP A+++A+ LL++VGALEGDE LTPLGHHLAKLPVD+LIGKM+LYG IFGCLSPILS
Sbjct: 1057 PPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILS 1116
Query: 1213 VSAFLS-YKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWE 1271
++AFLS KSPF+Y KDE QNV+R KLALL+ K++ S + N+ DRQSDHLLM+ AYEKW
Sbjct: 1117 IAAFLSCCKSPFVYAKDE-QNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWV 1175
Query: 1272 KILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAK 1331
+IL+++G KAA+ FC S FL+SSVM +RE RV+FG LLADIGLI+LPK G++
Sbjct: 1176 RILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKG---KGRRKEN 1232
Query: 1332 LDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGR 1391
D D +QPFN+YS V+KAILCAGL PN+A G + +R +
Sbjct: 1233 FDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYA------- 1285
Query: 1392 TLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK-VFLRDTSVISPYSILLFGGS 1450
+W DG+REVH+H +SIN N KAFQYPFIVFLEK+ET K V+L+DT+V+SP+SILLFGGS
Sbjct: 1286 -VWHDGKREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGS 1344
Query: 1451 INVQHQTGLVAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSI 1510
INV HQ+G V IDGWLKLTAPAQ AVLFKELRL LHSILK+LIRKPE + +V+NE++KS+
Sbjct: 1345 INVHHQSGSVTIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSM 1404
Query: 1511 INLLLEEG 1518
++LL+EEG
Sbjct: 1405 VHLLIEEG 1412
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 75 IYEKLSCEGFTNHHIELALSVLKDAATFESALDWLCLNLPSDELPLKFSTGASSF-DKGG 133
+YE LSCEGF ++ IEL LS L+D AT E+ALDWLCLNLPS ELP+ FS GAS F G
Sbjct: 76 LYENLSCEGFLDNQIELVLSSLRDGATLETALDWLCLNLPSHELPVNFSNGASRFPSTGR 135
Query: 134 SVGVVVFQNSXXXXXXXXXXXXXXXXXXXXXXXQFLIKRRQLNDXXXXXLDSSFQKSQAD 193
SV V+ S + L++ + D SS Q SQAD
Sbjct: 136 SVAVI----SKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRDEEEEDSLSSCQPSQAD 191
Query: 194 WIKQYVQQQXXXXXXXXXXXXXYDFNCGARSNRIKQQPRSYDVIXXXXXXXXXXXXXXXX 253
WI QY+++ D G PRS++VI
Sbjct: 192 WIHQYMKRLEEEELESSDDER--DKVSG---------PRSFEVIAKEYCVERYNAIKAKR 240
Query: 254 KGDKKQKEQAGIVIRELKQEMSALGLS 280
KGDK + QAG+ I +LK+EM+ALG S
Sbjct: 241 KGDKSGQSQAGLAICKLKEEMNALGPS 267
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 588 bits (1517), Expect = e-168, Method: Compositional matrix adjust.
Identities = 342/874 (39%), Positives = 506/874 (57%), Gaps = 85/874 (9%)
Query: 645 KEMESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGK 704
KE S L++ Q ++ + + FR LP +K + L + +N VLVV GETG GK
Sbjct: 198 KEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGK 257
Query: 705 TTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQV 764
TTQ+PQFIL++ I S G CNI+CTQPRRI+AISVA R++ ER E G VGYQ+
Sbjct: 258 TTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESI----GESVGYQI 313
Query: 765 RLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVE 824
RL+S ++++T+LLFCTTG+LLR+L+ D NLT ++H++VDE+HER + DFLLI+L+DL+
Sbjct: 314 RLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLP 373
Query: 825 KRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLA 884
+R L++ILMSAT++A +FS YFG+ P + G T PV FLED+ ++ Y +
Sbjct: 374 RRP-----DLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIK 428
Query: 885 SDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSY 944
S + Q S +G S KK+ D + L E+ + S+Y+SY
Sbjct: 429 SSDSGNY--------QGSSRGRRRESESKKD-------DLTTLFEDID----INSHYKSY 469
Query: 945 SEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQF 1004
S + +L+ + ID DL+E I I G GAILVFL G EI+ L +K+ ++
Sbjct: 470 SSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFL 529
Query: 1005 GGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPK 1064
G S V+PLH S+ + Q+ +F RPP N RK+V+ATNIAE+SITIDDVVYV+DCG+ K
Sbjct: 530 GDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAK 589
Query: 1065 ENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEML 1124
E A K++ ++ WIS V+ G+C+ LY + ++ + YQ+PE++
Sbjct: 590 ETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQ-YQLPEII 648
Query: 1125 RMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHH 1184
R PL ELCL IK L +G I FL++AL+PP A++ A+ LL +GAL E LTPLG H
Sbjct: 649 RTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRH 708
Query: 1185 LAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYK 1244
L LPVD IGKM+L GAIF C++P L+++A L+Y+SPF+ P + K+ + AK
Sbjct: 709 LCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYF---- 764
Query: 1245 IDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRV 1304
+GD+ SDH+ ++KAYE + + K + FC FLS + + +MR
Sbjct: 765 ---AGDSC-----SDHIALLKAYEGYR---DAKRGGNEKDFCWQNFLSPVTLRMMEDMRN 813
Query: 1305 QFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQP--FNIYSHHSSVLKAILCAGLY 1362
QF LL+DIG + D S+P +N YS+ ++ A+LCAGLY
Sbjct: 814 QFLDLLSDIGFV---------------------DKSKPNAYNQYSYDMEMISAVLCAGLY 852
Query: 1363 PNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVF 1422
PNV + +R A+ + L +V +HP S+N+ F P++V+
Sbjct: 853 PNVVQCK-----------RRGKRTAFYTKELG-----KVDIHPGSVNARVNLFSLPYLVY 896
Query: 1423 LEKVETNKVFLRDTSVISPYSILLFGGS-INVQHQTGLVAIDGWLKLTAPAQIAVLFKEL 1481
EKV+T V++RD++ IS Y++L+FGG+ I + G+ + G+L +A I L + L
Sbjct: 897 SEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELIQRL 956
Query: 1482 RLRLHSILKELIRKPENAIVVNNE-IIKSIINLL 1514
R + +L + I P I V + ++ +++ LL
Sbjct: 957 RGEVDKLLNKKIEDPSLDITVEGKGVVSAVVELL 990
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 545 bits (1405), Expect = e-155, Method: Compositional matrix adjust.
Identities = 335/898 (37%), Positives = 500/898 (55%), Gaps = 85/898 (9%)
Query: 626 NKNSTHSSPQPFSQREIHMKEM---ESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKG 682
N + +P+ Q + + + S +L+ Q + S Q M FR TLP K
Sbjct: 247 NGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKTLPAYKEKD 306
Query: 683 DILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAE 742
+L+ + N V+VV GETG GKTTQ+PQ+IL+ IE+ G C+I+CTQPRRI+AISV+E
Sbjct: 307 ALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSE 366
Query: 743 RVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIV 802
RVA ER E G VGY+VRL+ + T+LLFCTTG+LLR+L+ DR+L G+TH++V
Sbjct: 367 RVAAERGEQI----GESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVV 422
Query: 803 DEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEG 862
DE+HER + DFLLIVLKDL+ +R LK+ILMSAT++A LFS YFG P + G
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRRP-----DLKLILMSATLNAELFSSYFGGAPAMHIPG 477
Query: 863 RTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWG 922
T+PV FLED + YRL + + + G K QK + R K+L+ S
Sbjct: 478 FTYPVRAHFLEDYLETSGYRLTTYN--QIDDYGEEKTWKMQKQAQFKKR--KSLISSAVE 533
Query: 923 DESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAIL 982
D ++++ Y+ + + +L + D I ++L+E+++C I + GA+L
Sbjct: 534 DA-----------LEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVL 582
Query: 983 VFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIAT 1042
VF+ G +IN+L ++L A G + ++ H S+AS+EQ+ +F RPP IRK+V+AT
Sbjct: 583 VFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLAT 642
Query: 1043 NIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGIC 1102
N+AETSITI+DVVYVIDCG+ KE A ++ WIS V PG C
Sbjct: 643 NMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGEC 702
Query: 1103 FCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTA 1162
+ LY R +E YQ PE+LR PL LCLQIK L LG I FLS AL+PP+ ++ A
Sbjct: 703 YHLYPRCVYEAFA-DYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNA 761
Query: 1163 VSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSP 1222
V L +GAL+ DE LTPLG +L+ LPV+ +GKM++ GAIF CL P+++V A LS + P
Sbjct: 762 VEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP 821
Query: 1223 FIYPKDEKQNVE--RAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTK 1280
F+ P D+K E R+K + +Y SDHL +++AY W+ + + T
Sbjct: 822 FLMPFDKKDLAETARSKFSGRDY--------------SDHLTLVRAYNGWK---DAERTH 864
Query: 1281 AAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDAS 1340
+ +C FLSS + + MR QF LL + LI D
Sbjct: 865 SGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLI---------------------DNI 903
Query: 1341 QPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRRE 1400
+ + SH +++AI+CAG++P V + + TL +++ DG +
Sbjct: 904 EGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTME--------------DG--Q 947
Query: 1401 VHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTG-L 1459
V ++ SS+N N +P++VF +KV+ N VFLRD++ +S +LLFG I+ G L
Sbjct: 948 VLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHL 1007
Query: 1460 VAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSIINLLLEE 1517
+ G+L+ +A + L+ L +++ + P+ I + ++++ +I L+ E+
Sbjct: 1008 KMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVSED 1065
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 545 bits (1404), Expect = e-155, Method: Compositional matrix adjust.
Identities = 335/898 (37%), Positives = 500/898 (55%), Gaps = 85/898 (9%)
Query: 626 NKNSTHSSPQPFSQREIHMKEM---ESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKG 682
N + +P+ Q + + + S +L+ Q + S Q M FR TLP K
Sbjct: 247 NGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKTLPAYKEKD 306
Query: 683 DILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAE 742
+L+ + N V+VV GETG GKTTQ+PQ+IL+ IE+ G C+I+CTQPRRI+AISV+E
Sbjct: 307 ALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSE 366
Query: 743 RVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIV 802
RVA ER E G VGY+VRL+ + T+LLFCTTG+LLR+L+ DR+L G+TH++V
Sbjct: 367 RVAAERGEQI----GESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVV 422
Query: 803 DEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEG 862
DE+HER + DFLLIVLKDL+ +R LK+ILMSAT++A LFS YFG P + G
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRRP-----DLKLILMSATLNAELFSSYFGGAPAMHIPG 477
Query: 863 RTHPVTTSFLEDIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWG 922
T+PV FLED + YRL + + + G K QK + R K+L+ S
Sbjct: 478 FTYPVRAHFLEDYLETSGYRLTTYN--QIDDYGEEKTWKMQKQAQFKKR--KSLISSAVE 533
Query: 923 DESLLSEESSNPYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAIL 982
D ++++ Y+ + + +L + D I ++L+E+++C I + GA+L
Sbjct: 534 DA-----------LEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVL 582
Query: 983 VFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIAT 1042
VF+ G +IN+L ++L A G + ++ H S+AS+EQ+ +F RPP IRK+V+AT
Sbjct: 583 VFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLAT 642
Query: 1043 NIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGIC 1102
N+AETSITI+DVVYVIDCG+ KE A ++ WIS V PG C
Sbjct: 643 NMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGEC 702
Query: 1103 FCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTA 1162
+ LY R +E YQ PE+LR PL LCLQIK L LG I FLS AL+PP+ ++ A
Sbjct: 703 YHLYPRCVYEAFA-DYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNA 761
Query: 1163 VSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSP 1222
V L +GAL+ DE LTPLG +L+ LPV+ +GKM++ GAIF CL P+++V A LS + P
Sbjct: 762 VEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDP 821
Query: 1223 FIYPKDEKQNVE--RAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTK 1280
F+ P D+K E R+K + +Y SDHL +++AY W+ + + T
Sbjct: 822 FLMPFDKKDLAETARSKFSGRDY--------------SDHLTLVRAYNGWK---DAERTH 864
Query: 1281 AAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDAS 1340
+ +C FLSS + + MR QF LL + LI D
Sbjct: 865 SGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLI---------------------DNI 903
Query: 1341 QPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRRE 1400
+ + SH +++AI+CAG++P V + + TL +++ DG +
Sbjct: 904 EGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTME--------------DG--Q 947
Query: 1401 VHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTG-L 1459
V ++ SS+N N +P++VF +KV+ N VFLRD++ +S +LLFG I+ G L
Sbjct: 948 VLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHL 1007
Query: 1460 VAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSIINLLLEE 1517
+ G+L+ +A + L+ L +++ + P+ I + ++++ +I L+ E+
Sbjct: 1008 KMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVSED 1065
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 540 bits (1391), Expect = e-153, Method: Compositional matrix adjust.
Identities = 329/886 (37%), Positives = 498/886 (56%), Gaps = 81/886 (9%)
Query: 634 PQPFSQREIHMKEMESAELRKAQGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDV 693
P P S +I + S +LR Q S Q M R +LP + +L + +N V
Sbjct: 181 PLPISATKILWQR--SLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQV 238
Query: 694 LVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSP 753
+V+ GETG GKTTQ+PQFIL+ IE+ G +I+CTQPRRI+A+SV+ERVA ER E
Sbjct: 239 IVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQ-- 296
Query: 754 GLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGD 813
G VGY+VRL+ K T+LLFCTTGILLR+L+ DRNL G+TH+IVDE+HER + D
Sbjct: 297 --LGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNED 354
Query: 814 FLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLE 873
FLLI+LKDL+ +RS +LK+ILMSAT+DA LFS YFG V+ G T+PV + FLE
Sbjct: 355 FLLIILKDLLSRRS-----ELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLE 409
Query: 874 DIYDQINYRLASDSPASLAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSN 933
DI + YRL P Q G + K + + + E++
Sbjct: 410 DILEMTRYRLT------------PYNQIDDYGQERTWKMNKQIPKKRKSQITFVVEDA-- 455
Query: 934 PYFVPSNYQSYSEQAQQNLKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINN 993
++++ +S + +++L D I ++L+E L+C I E G G IL+FL G +I++
Sbjct: 456 --LRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISS 513
Query: 994 LYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDD 1053
L +KL FG ++ H S+ + EQ+ +F P +RK+V+ATNIAETSITI+D
Sbjct: 514 LKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITIND 573
Query: 1054 VVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFER 1113
V +VIDCG+ KE A ++ WIS V+PG C+ LY + ++
Sbjct: 574 VAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDA 633
Query: 1114 LMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALE 1173
YQ+PE+LR PL LCLQIK L+LG I FLS AL+ P+ A+ A++ L +GAL+
Sbjct: 634 FAE-YQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALD 692
Query: 1174 GDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNV 1233
+E LT LG +L+KLP++ +GKM++ GAI GCL PIL+V+A LS + PF+ P+D+K
Sbjct: 693 ENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLA 752
Query: 1234 ERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSS 1293
E AK S + D SDHL +++AYE W+K + A +C FLS
Sbjct: 753 EAAK----------SQFSRD---HSDHLALVRAYEGWKKAEEE---SAVYDYCWKNFLSI 796
Query: 1294 SVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVL 1353
+ I +R +F +LL D GLI DG + +C++ + +++
Sbjct: 797 QSLRAIDSLRKEFFSLLKDTGLI--------DG------NPSICNSE------GNDANLT 836
Query: 1354 KAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTK 1413
+A++C G+YP + + + +L +++ DG +V ++ +S N+
Sbjct: 837 RAVICYGMYPGICSVVHNERSFSLKTME--------------DG--QVLLYSNSENARET 880
Query: 1414 AFQYPFIVFLEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTG-LVAIDGWLKLTAPA 1472
YP++VF EK++ N VFLRD++ S +++LFGGSI+ G L + G+L+
Sbjct: 881 KIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGGYLEFFMKP 940
Query: 1473 QIAVLFKELRLRLHSILKELIRKPENAIVVNNEIIKSIINLLLEEG 1518
+A +++ L+ L +++ + P+ + + E++ +I L+ E+G
Sbjct: 941 DVAEIYQTLKKELDELIQNKLLNPKVDMQAHRELLSAIRLLVSEDG 986
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 333/911 (36%), Positives = 505/911 (55%), Gaps = 90/911 (9%)
Query: 594 VDSLLLGNGSGETASVDVTDCKPPESFVR-QDENKNSTHSSPQPFSQREIHMKEME--SA 650
+DS L +G V D +PP+ DEN +S F + K ++ S
Sbjct: 186 LDSQQLSSGKANEC---VADSQPPKQTEELPDENSDS-------FLDGSVMEKVLQRRSM 235
Query: 651 ELRKAQGNKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQ 710
+R Q S + M +FR TLP K +LQ + N V+VV GETG GKTTQ+PQ
Sbjct: 236 RMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQ 295
Query: 711 FILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAK 770
+IL+ IESG G CNI+CTQPRRI+A++V+ERV+ ER EP G VG++VRL+ +
Sbjct: 296 YILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEP----LGETVGFKVRLEGMR 351
Query: 771 NEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTES 830
+ T LLFCT+GILLR+L+ DRNL G+TH+ VDE+HER + DFL+IVLK+L+ +R
Sbjct: 352 GKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRP--- 408
Query: 831 STKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQINYRLASDSPAS 890
L+++LMSAT++A LFS Y+G P + G THPV FLED+ + Y+L S +
Sbjct: 409 --DLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVD 466
Query: 891 LAYGGFPKGQNSQKGSVTNSRGKKNLVLSGWGDESLLSEESSNPYFVPSNYQSYSEQAQQ 950
YG K +QK + R +KN + + L EE+ SN++SY+ + +
Sbjct: 467 -DYGQ-EKTWKTQKQLM--PRKRKNQITT-------LVEEA----LSKSNFESYNSRTRD 511
Query: 951 NLKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSD 1010
+L D I ++L+E ++C I GA+LVFL G +I +L D++ A G +
Sbjct: 512 SLSSWMPDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRV 571
Query: 1011 WVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYA 1070
++ H S+A+ EQ+ +F R P NIRK+V+ATN+AE SITI+DVV+V+DCG+ KE A
Sbjct: 572 LLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDA 631
Query: 1071 QMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVE 1130
++ WIS + PG C+ LY + ++ YQ+PE+LR PL
Sbjct: 632 LNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAE-YQLPELLRTPLNS 690
Query: 1131 LCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1190
LCLQIK L + I FLS AL+ P++ A+ A+ L +GAL+ E LT LG L+ LPV
Sbjct: 691 LCLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPV 750
Query: 1191 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1250
D +GKM++ GAIF C PIL++ + LS + PF+ P+D+K AKL
Sbjct: 751 DPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRF---------- 800
Query: 1251 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1310
SDH+ +++A+E W+ + + +A +FC FLS+ + I +R QF +L
Sbjct: 801 --SAKDYSDHMALVRAFEGWK---DAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYIL 855
Query: 1311 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1370
+ GL+ D + + N SH+ S+++A++C+GL+P +A
Sbjct: 856 KEAGLVH---------------DDLALN-----NKLSHNQSLVRAVICSGLFPGIA---- 891
Query: 1371 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK 1430
S + R +S ++ DG +V ++ +S+NS YP++VF EKV+ N
Sbjct: 892 -------SVVHRETSMSFKTMD---DG--QVSLYANSVNSRFPTIPYPWLVFGEKVKVNA 939
Query: 1431 VFLRDTSVISPYSILLFGGSINVQHQTG-LVAIDGWLKLTAPAQIAVLFKELRLRLHSIL 1489
V +RD++ + S++LFGGS++ Q G L +DG++ +A + +L+ L +L
Sbjct: 940 VLIRDSTGVPDSSLILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLL 999
Query: 1490 KELIRKPENAI 1500
++ + P I
Sbjct: 1000 QKKLEDPSMDI 1010
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue and
tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 252 bits (644), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 255/504 (50%), Gaps = 45/504 (8%)
Query: 952 LKRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDW 1011
+ +N + +D L++ L+ I +GAILVFLPG +IN +L+ + F +
Sbjct: 525 MATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD 584
Query: 1012 VIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQ 1071
+I LHS V + EQK+VF RPP RK+V+ATNIAE+++TIDDVVYVID GR KE
Sbjct: 585 IICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 644
Query: 1072 MKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVEL 1131
+S++ W+S +PGIC+ LY+R R M ++VPE+ RMP+ EL
Sbjct: 645 NNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVEEL 703
Query: 1132 CLQIKLLSLG-HIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1190
CLQ+K+L FL + L+PP ++++ A+S+L ++GAL E LT LG LPV
Sbjct: 704 CLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPV 763
Query: 1191 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1250
LI KM+ + + CL P L+++ YK PF P + + A L + G GD
Sbjct: 764 HPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCG-GD 822
Query: 1251 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1310
SDHL ++ A+E W+ N KG + +FC+ YF+S S M + +MR Q + L
Sbjct: 823 -------SDHLAVVAAFECWK---NAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESEL 872
Query: 1311 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1370
G+I P D + SQ S +L+A+L GLYP V
Sbjct: 873 KRHGII--PND--------------ISSCSQ----NSRDPGILRAVLAVGLYPMV----- 907
Query: 1371 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETN- 1429
G + + +R+ SG + VH ++ N ++K + +VF E +
Sbjct: 908 GRLCPAFGNNRRTIVETASG------AKVRVHSLSNNFNLSSKKYDESLLVFDEITRGDG 961
Query: 1430 KVFLRDTSVISPYSILLFGGSINV 1453
+ +R+ +V +LL I V
Sbjct: 962 GMHIRNCTVARDLPLLLISTEIAV 985
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 143/213 (67%), Gaps = 13/213 (6%)
Query: 666 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 725
++++K R+ LPI + K I ++ N V+++ GETG GKTTQVPQ++LD M S C
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRET-C 236
Query: 726 NIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILL 785
IVCTQPRRI+A+SV+ER++ ER E G +GY+VRL S + ++FCT GILL
Sbjct: 237 KIVCTQPRRISAMSVSERISCERGESI----GENIGYKVRLQSKGGRHSSVVFCTNGILL 292
Query: 786 RKLMGD---RNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSAT 842
R L+G +++ ITHIIVDE+HER DF+L +++DL+ S+ L++ILMSAT
Sbjct: 293 RVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLL-----PSNPHLRLILMSAT 347
Query: 843 VDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDI 875
+DA FS YFG CPVV G T+PV T +LED+
Sbjct: 348 LDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDV 380
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 260/521 (49%), Gaps = 51/521 (9%)
Query: 940 NYQSYSEQAQQNLKR----LNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLY 995
N QS S+QAQ L + + + +D L+ L+ I +GAILVFLPG EI+
Sbjct: 533 NIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTK 592
Query: 996 DKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVV 1055
+KL+ F + ++ LHS V + EQK+VF RPP RK+V+ATNIAE+++TIDDVV
Sbjct: 593 EKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVV 652
Query: 1056 YVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLM 1115
YVID GR KE +S++ W+S + GIC+ LY++ R L
Sbjct: 653 YVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLP 712
Query: 1116 RPYQVPEMLRMPLVELCLQIKLLSLG-HIKPFLSEALEPPKNEAMDTAVSLLYEVGALEG 1174
Y+VPE++RMP+ ELCLQ+K+L ++ FL + ++PP ++++ A+ +L ++GAL
Sbjct: 713 E-YRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTP 771
Query: 1175 DEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVE 1234
+E LT LG +LPV I KM+ + + CL P L ++ K PF P +
Sbjct: 772 EEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPG---D 828
Query: 1235 RAKLALLNYKIDG-SGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSS 1293
R K A +++ GD SDHL + A++ W+ N K + A++FC+ YF+S
Sbjct: 829 RKKAAAAKHELASLYGD------HSDHLATVAAFQCWK---NAKASGQAKEFCSKYFISQ 879
Query: 1294 SVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVL 1353
VM + ++ + L G+I +S ++ +H +L
Sbjct: 880 VVMKRLDDLCRKLQGELNRHGVIP--------------------SSSSNCSLNAHDPGIL 919
Query: 1354 KAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTK 1413
+A++ GLYP + G + + RS +G + V ++++ ++
Sbjct: 920 RAVIAVGLYPML-----GRMCPLSKNRTRSVIETIAG------AKVRVPSLSNNVDMSST 968
Query: 1414 AFQYPFIVFLEKVETN-KVFLRDTSVISPYSILLFGGSINV 1453
F IVF E + V +R +V+ +LLF I V
Sbjct: 969 KFDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAV 1009
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 150/223 (67%), Gaps = 13/223 (5%)
Query: 661 RSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESG 720
+ + ++++ + R+ LPIA+ + I+ ++ N V+++ GETG GKTTQVPQ++LD M S
Sbjct: 203 KERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSK 262
Query: 721 LGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCT 780
C I+CTQPRRI+AISV++R++ ER E G VGY+VRL S ++ ++FCT
Sbjct: 263 KEA-CKIICTQPRRISAISVSDRISWERGE----TIGRTVGYKVRLQSEGGRESSVVFCT 317
Query: 781 TGILLRKLMG---DRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVI 837
GILLR L+G + ++ ITHIIVDE+HER DF+L++L+DL+ S+ L++I
Sbjct: 318 NGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLP-----SNPHLRLI 372
Query: 838 LMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLEDIYDQIN 880
LMSAT+DA FS YFG CPVV G T+PV T FL+D +N
Sbjct: 373 LMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLN 415
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 226/494 (45%), Gaps = 78/494 (15%)
Query: 953 KRLNEDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINN----LYDKLVASHQFGGQS 1008
K+ D +D L+ + I T EG ILVFL G EI++ LY+++ G
Sbjct: 700 KQPETDYLDAALI--TVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKG---LGKNV 754
Query: 1009 SDWVI-PLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENG 1067
+ +I P++S++ S Q R+F PP RKVV+ATNIAE S+TID + YV+D G K+N
Sbjct: 755 PELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNV 814
Query: 1068 SYAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMP 1127
+ L S+V IS PG C+ LYT + M P +PE+ R+
Sbjct: 815 YNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRIN 874
Query: 1128 LVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAK 1187
L L +K + + + F + ++PP+ +A+ +A+ LY +GAL+ + +LT LG +A+
Sbjct: 875 LGMTTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAE 932
Query: 1188 LPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDG 1247
P++ + KM+L GC IL++ A + + F P++++ ++ +
Sbjct: 933 FPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQ----- 987
Query: 1248 SGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFG 1307
+ DHL ++ YE W K + +C F+ S + +++R Q
Sbjct: 988 --------PEGDHLTLLAVYEAW------KAKNFSGPWCFENFIQSRSLRRAQDVRKQ-- 1031
Query: 1308 TLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAA 1367
L+S+ Y KLD V + + + KAI AG +
Sbjct: 1032 -------LLSIMDKY--------KLDVVTAG--------KNFTKIRKAI-TAGFF----- 1062
Query: 1368 GEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVE 1427
++ Y RTL + + V++HPSS Q ++++ + V
Sbjct: 1063 ---------FHGARKDPQEGY--RTLVEN--QPVYIHPSSALFQR---QPDWVIYHDLVM 1106
Query: 1428 TNKVFLRDTSVISP 1441
T K ++R+ +VI P
Sbjct: 1107 TTKEYMREVTVIDP 1120
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 124/197 (62%), Gaps = 15/197 (7%)
Query: 672 RATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQ 731
R +LPI LK +++Q + +N VLVV GETGSGKTTQV Q+ + E+G I CTQ
Sbjct: 512 RESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQY----LAEAGYTTKGKIGCTQ 567
Query: 732 PRRIAAISVAERVADE-RCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMG 790
PRR+AA+SVA+RVA+E C G VGY +R + T + + T G+LLR+++
Sbjct: 568 PRRVAAMSVAKRVAEEFGCR-----LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 622
Query: 791 DRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSR 850
D NL+ + I++DE HER++ D L +LK L+++R L++I+ SAT+DA FS
Sbjct: 623 DENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRR-----LDLRLIVTSATLDAEKFSG 677
Query: 851 YFGHCPVVTAEGRTHPV 867
YF +C + T GRT PV
Sbjct: 678 YFFNCNIFTIPGRTFPV 694
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 659 KMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMI- 717
K SQRY ++ + R LP+ K D L L N L++ GETGSGKTTQ+PQF+LD ++
Sbjct: 49 KAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVA 108
Query: 718 -ESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKL 776
S G + CTQPRR+AA+SV+ RVADE + S G + VGY +R + + +T L
Sbjct: 109 DNSDKGRKWLVGCTQPRRVAAMSVSRRVADE-MDVSIGEE---VGYSIRFEDCTSSRTML 164
Query: 777 LFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKV 836
+ T G+LLR+ M D L II+DE HER+L D L +LK+++ R LK+
Sbjct: 165 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRP-----DLKL 219
Query: 837 ILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLED 874
++MSAT++A F YF P++ GR HPV + ++
Sbjct: 220 VVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQE 257
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 221/489 (45%), Gaps = 77/489 (15%)
Query: 963 DLLEDLICFIDETH---GEGAILVFLPGVSEINNLYDKLVAS-HQFGGQSSDW-VIPLHS 1017
D LE I + + H G ILVFL G EI + K+ G Q V+PL+S
Sbjct: 261 DYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYS 320
Query: 1018 SVASTEQKRVFLRPPGNI-------RKVVIATNIAETSITIDDVVYVIDCGRPKENGSYA 1070
++ Q+++F P + RK+V++TNIAETS+TID +VYVID G K+
Sbjct: 321 TLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNP 380
Query: 1071 QMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVE 1130
++++ S++ IS +PG CF LYT F ++P PE+LR L
Sbjct: 381 RIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLAN 440
Query: 1131 LCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1190
L +K L + + F + ++PP E + A+ +L +GAL+ + LT G +++ P+
Sbjct: 441 TVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPL 498
Query: 1191 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1250
D + KM++ F C + ILSVSA LS + F+ P++ ++ + AK + IDG
Sbjct: 499 DPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGH--IDG--- 553
Query: 1251 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1310
DHL ++ Y + K +C F+++ M + +R Q ++
Sbjct: 554 --------DHLTLLNVYHAY------KQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIM 599
Query: 1311 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1370
+ L +C S FN ++ ++ KA+L AG + VA E+
Sbjct: 600 SRFNL-------------------KMC--STDFNSRDYYVNIRKAML-AGYFMQVAHLER 637
Query: 1371 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK 1430
+G L + VH+HP SN + ++++ E V T +
Sbjct: 638 ------------------TGHYLTVKDNQVVHLHP----SNCLDHKPEWVIYNEYVLTTR 675
Query: 1431 VFLRDTSVI 1439
F+R + I
Sbjct: 676 NFIRTVTDI 684
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 224/493 (45%), Gaps = 74/493 (15%)
Query: 955 LNEDVIDY-DLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVA-SHQFGGQSSDWV 1012
+ E V DY + I I+E G +LVFL G +I L +H SS +
Sbjct: 251 VEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLL 310
Query: 1013 -IPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQ 1071
+PL+S ++ +EQ+ +F P RKV+++TNIAETS+T++ VVYVID G K+
Sbjct: 311 PLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPI 370
Query: 1072 MKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVEL 1131
+ S+V IS V+PG C+ LYT F M +PEM R LV
Sbjct: 371 SDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVST 430
Query: 1132 CLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLT-PLGHHLAKLPV 1190
+Q+K L + +I F A PP +EAM A+ +LY + L+ D LT P G +A+LP+
Sbjct: 431 VIQLKALGIDNILGFDWPA--PPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPL 488
Query: 1191 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1250
D +I KM+L + GC I++++A LS +S +I + ++ + AKL
Sbjct: 489 DPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRF---------- 538
Query: 1251 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1310
+ DH+ + Y+ + + +K Q+C FL+ M + E+R Q +
Sbjct: 539 ---AAAEGDHVTFLNVYKGFLE------SKKPTQWCYKNFLNYQSMKKVVEIRDQLKRIA 589
Query: 1311 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1370
+G+ L S CD +V KA+ AG + N
Sbjct: 590 RRLGI---------------TLKS--CDGDM--------EAVRKAV-TAGFFANAC---- 619
Query: 1371 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSI--NSNTKAFQYPFIVFLEKVET 1428
L+ S+ Y G EV++HPSS+ N K ++V+ V T
Sbjct: 620 --------RLEPHSNGVYKT----IRGSEEVYIHPSSVLFRVNPK-----WVVYQSIVST 662
Query: 1429 NKVFLRDTSVISP 1441
+ ++R+ I+P
Sbjct: 663 ERQYMRNVVTINP 675
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 36/231 (15%)
Query: 665 YQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGL--G 722
Y ++ K R LP+ + +IL L++ + ++ GETGSGKTTQ+PQ+ + E+G G
Sbjct: 38 YANIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQY----LKEAGWAEG 93
Query: 723 GHCNIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRL-DSAKNEKTKLLFCT 780
G I CTQPRR+A +V+ RVA+E G+ G VGY +R D + T + F T
Sbjct: 94 GRV-IACTQPRRLAVQAVSARVAEEM-----GVNLGEEVGYTIRFEDHTTSGVTSVKFLT 147
Query: 781 TGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMS 840
G+L+R++M D LT + I++DE HERS+ D LL +LK + +R +L++I+ S
Sbjct: 148 DGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRP-----ELRLIISS 202
Query: 841 ATVDATLFSRYFG-----HCP------------VVTAEGRTHPVTTSFLED 874
AT++A S +F H P +++ EGR V ++E+
Sbjct: 203 ATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVEE 253
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 13/200 (6%)
Query: 672 RATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQ 731
R LPI + +L +K++ VL++ GETGSGKTTQ+PQ++ E+G + CTQ
Sbjct: 401 RKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLH----EAGYTKLGKVGCTQ 456
Query: 732 PRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGD 791
PRR+AA+SVA RVA E G G VGY +R + +EKT L + T G+LLR+L+G+
Sbjct: 457 PRRVAAMSVAARVAQEMG----GKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGE 512
Query: 792 RNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRY 851
+L + IIVDE HER+L D L ++KD+ R LK+++ SAT+DA FS +
Sbjct: 513 PDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPD-----LKLLISSATMDAEKFSDF 567
Query: 852 FGHCPVVTAEGRTHPVTTSF 871
F P+ GR +PV F
Sbjct: 568 FDQAPIFRFPGRRYPVDICF 587
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 213/468 (45%), Gaps = 74/468 (15%)
Query: 979 GAILVFLPGVSEINNLYDKLVASHQFGGQSSDW----VIPLHSSVASTEQKRVFLRPPGN 1034
G +LVFLPG EI + + L H+ G + + P+++++ S Q ++F P
Sbjct: 613 GDVLVFLPGQEEIEAVEENL--KHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEG 670
Query: 1035 IRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXX 1094
RKVV+ATNIAETS+TID + YV+D G K + + S++ IS
Sbjct: 671 ARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRA 730
Query: 1095 XXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPP 1154
PG C+ LYT + + VPE+ R L + L +K L + ++ F + ++PP
Sbjct: 731 GRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFMDPP 788
Query: 1155 KNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVS 1214
+EA+ ++ LL+ +GAL LT G +A+ P+D ++ KM++ + C I+S++
Sbjct: 789 PSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIA 848
Query: 1215 AFLSY-KSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKI 1273
A LS S F PKD++ + + A+ N+ + G DH+ +K Y W
Sbjct: 849 AMLSIGPSIFYRPKDKQVHADN---AMKNFHVGNVG---------DHIAFLKIYNSW--- 893
Query: 1274 LNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLD 1333
K T + Q+C ++ M R++R Q L L+
Sbjct: 894 ---KETNYSTQWCYENYIQVRSMKRARDIRDQLEGL----------------------LE 928
Query: 1334 SVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTL 1393
V D S N S+ K+I+ AG +P+ A ++ + ++K +
Sbjct: 929 RVEIDVSSNAN---ELDSIRKSIV-AGFFPHTAKLQKN---GSYRTVKHPQT-------- 973
Query: 1394 WFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVFLRDTSVISP 1441
VH+HP+S S ++V+ + V T+K ++R + + P
Sbjct: 974 -------VHIHPASGLSQVLP---RWVVYHQLVLTSKEYMRQVTELKP 1011
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein
| chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 130/207 (62%), Gaps = 15/207 (7%)
Query: 666 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 725
+++ + R +LPI + +L+ ++E+ VLV+ G+TGSGKTTQ+PQ++ E+G
Sbjct: 395 EELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH----EAGYTKRG 450
Query: 726 NIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRLDSAKNEKTKLLFCTTGIL 784
+ CTQPRR+AA+SVA RVA E G++ G VGY +R + ++KT L + T G+L
Sbjct: 451 KVGCTQPRRVAAMSVAARVAQEM-----GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 505
Query: 785 LRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVD 844
LR+L+G+ +L + +IVDE HER+L D L ++KD+ R LK+++ SAT+D
Sbjct: 506 LRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPD-----LKLLISSATMD 560
Query: 845 ATLFSRYFGHCPVVTAEGRTHPVTTSF 871
A FS YF P+ + GR +PV ++
Sbjct: 561 AEKFSDYFDTAPIFSFPGRRYPVEINY 587
Score = 150 bits (379), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 216/489 (44%), Gaps = 76/489 (15%)
Query: 958 DVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDW----VI 1013
D +D ++ L + E G+ ILVF G EI + + H+ G + +
Sbjct: 594 DYMDAAIVTILTIHVREPLGD--ILVFFTGQEEIETAEE--ILKHRIRGLGTKIRELIIC 649
Query: 1014 PLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMK 1073
P+++++ S Q ++F P RKVV+ATNIAETS+TID + YV+D G K +
Sbjct: 650 PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 709
Query: 1074 LSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCL 1133
+ S++ IS PG C+ LYT + + VPE+ R L + L
Sbjct: 710 MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 769
Query: 1134 QIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVL 1193
+K L + + F + ++PP EA+ ++ LL+ +GAL LT G +A+ P+D +
Sbjct: 770 ALKSLGIHDLINF--DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPM 827
Query: 1194 IGKMMLYGAIFGCLSPILSVSAFLSYKSPFIY-PKDEKQNVERAKLALLNYKIDGSGDTN 1252
+ KM++ + C I+S++A LS Y PKD++ + + A+ +N+ G
Sbjct: 828 LSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNAR---MNFHTGNVG--- 881
Query: 1253 DMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLAD 1312
DH+ ++K Y W K T + Q+C ++ M R++R Q L
Sbjct: 882 ------DHIALLKVYSSW------KETNFSTQWCYENYIQVRSMKRARDIRDQLEGL--- 926
Query: 1313 IGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGI 1372
L+ V D S N SV K+I+ AG +P+ A ++
Sbjct: 927 -------------------LERVEIDISSNLN---ELDSVRKSIV-AGFFPHTAKLQKN- 962
Query: 1373 VAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVF 1432
+ ++K + VH+HP NS ++V+ E V T+K +
Sbjct: 963 --GSYRTVKHPQT---------------VHIHP---NSGLSQVLPRWVVYHELVLTSKEY 1002
Query: 1433 LRDTSVISP 1441
+R + + P
Sbjct: 1003 MRQVTELKP 1011
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 130/207 (62%), Gaps = 15/207 (7%)
Query: 666 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 725
+++ + R +LPI + +L+ ++E+ VLV+ G+TGSGKTTQ+PQ++ E+G
Sbjct: 385 EELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLH----EAGYTKRG 440
Query: 726 NIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRLDSAKNEKTKLLFCTTGIL 784
+ CTQPRR+AA+SVA RVA E G++ G VGY +R + ++KT L + T G+L
Sbjct: 441 KVGCTQPRRVAAMSVAARVAQEM-----GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 495
Query: 785 LRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVD 844
LR+L+G+ +L + +IVDE HER+L D L ++KD+ R LK+++ SAT+D
Sbjct: 496 LRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPD-----LKLLISSATMD 550
Query: 845 ATLFSRYFGHCPVVTAEGRTHPVTTSF 871
A FS YF P+ + GR +PV ++
Sbjct: 551 AEKFSDYFDTAPIFSFPGRRYPVEINY 577
Score = 150 bits (379), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 216/489 (44%), Gaps = 76/489 (15%)
Query: 958 DVIDYDLLEDLICFIDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDW----VI 1013
D +D ++ L + E G+ ILVF G EI + + H+ G + +
Sbjct: 584 DYMDAAIVTILTIHVREPLGD--ILVFFTGQEEIETAEE--ILKHRIRGLGTKIRELIIC 639
Query: 1014 PLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMK 1073
P+++++ S Q ++F P RKVV+ATNIAETS+TID + YV+D G K +
Sbjct: 640 PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 699
Query: 1074 LSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCL 1133
+ S++ IS PG C+ LYT + + VPE+ R L + L
Sbjct: 700 MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 759
Query: 1134 QIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVL 1193
+K L + + F + ++PP EA+ ++ LL+ +GAL LT G +A+ P+D +
Sbjct: 760 ALKSLGIHDLINF--DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPM 817
Query: 1194 IGKMMLYGAIFGCLSPILSVSAFLSYKSPFIY-PKDEKQNVERAKLALLNYKIDGSGDTN 1252
+ KM++ + C I+S++A LS Y PKD++ + + A+ +N+ G
Sbjct: 818 LSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNAR---MNFHTGNVG--- 871
Query: 1253 DMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLAD 1312
DH+ ++K Y W K T + Q+C ++ M R++R Q L
Sbjct: 872 ------DHIALLKVYSSW------KETNFSTQWCYENYIQVRSMKRARDIRDQLEGL--- 916
Query: 1313 IGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGI 1372
L+ V D S N SV K+I+ AG +P+ A ++
Sbjct: 917 -------------------LERVEIDISSNLN---ELDSVRKSIV-AGFFPHTAKLQKN- 952
Query: 1373 VAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNKVF 1432
+ ++K + VH+HP NS ++V+ E V T+K +
Sbjct: 953 --GSYRTVKHPQT---------------VHIHP---NSGLSQVLPRWVVYHELVLTSKEY 992
Query: 1433 LRDTSVISP 1441
+R + + P
Sbjct: 993 MRQVTELKP 1001
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 11/215 (5%)
Query: 662 SQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILD--DMIES 719
SQRY D+ + R TLP+ K + L+ L N L++ GETGSGKTTQ+PQF++D D S
Sbjct: 48 SQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETS 107
Query: 720 GLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFC 779
+ CTQPRR+AA+SV+ RVA+E G VGY +R + + +T L +
Sbjct: 108 DKRRKWLVGCTQPRRVAAMSVSRRVAEE----MDVTIGEEVGYSIRFEDCSSPRTVLKYL 163
Query: 780 TTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILM 839
T G+LLR+ M D L II+DE HER+L D L +LK++++ R LK+++M
Sbjct: 164 TDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRP-----DLKLVVM 218
Query: 840 SATVDATLFSRYFGHCPVVTAEGRTHPVTTSFLED 874
SAT++A F YF P++ GR HPV + ++
Sbjct: 219 SATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQE 253
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 223/491 (45%), Gaps = 81/491 (16%)
Query: 963 DLLEDLICFIDETH---GEGAILVFLPGVSEINNLYDKLVAS-HQFGGQSSDW-VIPLHS 1017
D LE I + + H G ILVFL G EI + K+ G Q V+PL+S
Sbjct: 257 DYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYS 316
Query: 1018 SVASTEQKRVFLR---------PPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGS 1068
++ Q+++F PPG RK+V++TNIAETS+TID +VYVID G K+
Sbjct: 317 TLPPAMQQKIFDPAPEPVTEGGPPG--RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVY 374
Query: 1069 YAQMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPL 1128
++++ S++ IS +PG CF LYT F ++P PE+LR L
Sbjct: 375 NPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNL 434
Query: 1129 VELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKL 1188
L +K L + + F + ++PP E + A+ +L +GAL+ D LT G +++
Sbjct: 435 ANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEF 492
Query: 1189 PVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGS 1248
P+D + KM++ F C + ILSVSA LS + FI P++ ++ + AK + I+G
Sbjct: 493 PLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGH--IEG- 549
Query: 1249 GDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGT 1308
DHL ++ Y + K +C F+++ M + +R Q
Sbjct: 550 ----------DHLTLLNVYHAF------KQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593
Query: 1309 LLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAG 1368
+++ L +C S FN ++ ++ KA+L AG + VA
Sbjct: 594 IMSRFNL-------------------KMC--STDFNSRDYYINIRKAML-AGYFMQVAHL 631
Query: 1369 EQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVET 1428
E+ +G L + VH+HP SN + ++++ E V T
Sbjct: 632 ER------------------TGHYLTVKDNQVVHLHP----SNCLDHKPEWVIYNEYVLT 669
Query: 1429 NKVFLRDTSVI 1439
++ F+R + I
Sbjct: 670 SRNFIRTVTDI 680
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 20/231 (8%)
Query: 644 MKEMESAELRKAQG--NKMRSQRYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETG 701
++E AE K +G +K +++ ++ +F LPI + ++L+L++EN VLV+ GETG
Sbjct: 185 VEESSEAETGKHRGCYSKTAAEKAREGREF---LPIHGYREELLKLIEENQVLVIVGETG 241
Query: 702 SGKTTQVPQFILDDMIESGLGGHCNIVCTQPRRIAAISVAERVADERCEPSPGLQ-GSLV 760
SGKTTQ+PQ++ E+G I CTQPRR+AA+SVA RVA E G++ G V
Sbjct: 242 SGKTTQIPQYLQ----EAGYTKRGKIGCTQPRRVAAMSVASRVAQE-----VGVKLGHEV 292
Query: 761 GYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLK 820
GY +R + +EKT + + T G+LLR+L+ + L + II+DE HER+L D L ++K
Sbjct: 293 GYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVK 352
Query: 821 DLVEKRSTESSTKLKVILMSATVDATLFSRYFGHCPVVTAEGRTHPVTTSF 871
D+ + R L++I+ SAT++A FS YF + GR +PV F
Sbjct: 353 DVAKVRP-----DLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLF 398
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 11/216 (5%)
Query: 963 DLLEDLI---CFIDETHGEGAILVFLPGVSEINNLYDKLVASHQ-FGGQSSDWVI-PLHS 1017
D LE +I I +T G ILVFL G EI + L G + S+ +I P++S
Sbjct: 405 DYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYS 464
Query: 1018 SVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSV 1077
++ + Q +VF P RKVV+ATNIAETS+TID V YVID G K N + + S+
Sbjct: 465 NLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESL 524
Query: 1078 VDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKL 1137
+ IS PG CF LY E P +PE+ R L + L +K
Sbjct: 525 LVTPISKASAAQRAGRSGRTGPGKCFRLYNIKDLE----PTTIPEIQRANLASVVLTLK- 579
Query: 1138 LSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALE 1173
SLG F + ++PP A+ A+ LLY +GAL+
Sbjct: 580 -SLGIQDVFNFDFMDPPPENALLKALELLYALGALD 614
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 13/200 (6%)
Query: 668 MSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNI 727
M++ R LPI +++ ++LQ+++EN V+VV GETGSGKTTQ+ Q++ +D G + +
Sbjct: 551 MAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHED----GYTINGIV 606
Query: 728 VCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRK 787
CTQPRR+AA+SVA+RV++E G +GY +R + T + + T G+LLR+
Sbjct: 607 GCTQPRRVAAMSVAKRVSEE----METELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRE 662
Query: 788 LMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATL 847
+ D +L +++DE HERSL D L +LK +V +R K+I+ SAT++A
Sbjct: 663 TLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRR-----DFKLIVTSATLNAQK 717
Query: 848 FSRYFGHCPVVTAEGRTHPV 867
FS +FG P+ GRT PV
Sbjct: 718 FSNFFGSVPIFNIPGRTFPV 737
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 219/498 (43%), Gaps = 74/498 (14%)
Query: 957 EDVIDYDLLEDLICFIDETHGEGAILVFLPGVSEIN----NLYDKL--VASHQFGGQSSD 1010
ED ++ + + + I T G IL+F+ G EI +L +++ + S ++
Sbjct: 747 EDYVEAAVKQAMTIHI--TSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNL 804
Query: 1011 WVIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYA 1070
++P++S + + Q ++F +P RK ++ATNIAETS+T+D + YVID G K
Sbjct: 805 LILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNP 864
Query: 1071 QMKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVE 1130
+M + ++ IS PG C+ LYT + M P VPE+ R L
Sbjct: 865 RMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGN 924
Query: 1131 LCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPV 1190
+ L +K L + ++ F + ++PP E + ++ L+ +GAL LT LG + + P+
Sbjct: 925 VVLLLKSLKIDNLLDF--DFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPL 982
Query: 1191 DVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGD 1250
D + KM+L G C+ +L++ + LS S F PK+ + + A+
Sbjct: 983 DPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFV-------- 1034
Query: 1251 TNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLL 1310
+SDHL ++ Y++W K + +G +CN ++L + RE+R Q L
Sbjct: 1035 -----PESDHLTLLNVYQQW-KEHDYRG-----DWCNDHYLQVKGLRKAREVRSQ----L 1079
Query: 1311 ADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQ 1370
DI L L + + G + +C A Y H+S+ LK + G Y N G
Sbjct: 1080 LDI-LKQLKIELRSCGPDWDIVRKAICSA------YFHNSARLKGV---GEYVNCRTG-- 1127
Query: 1371 GIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVETNK 1430
H+HPSS + ++V+ E + T K
Sbjct: 1128 ----------------------------MPCHLHPSSALYGL-GYTPDYVVYHELILTTK 1158
Query: 1431 VFLRDTSVISPYSILLFG 1448
+++ + + P+ + G
Sbjct: 1159 EYMQCATSVEPHWLAELG 1176
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 135/242 (55%), Gaps = 51/242 (21%)
Query: 666 QDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHC 725
Q +++ R +LPIA+++ +++ +++ND+L++ GETGSGKTTQ+PQF+ + G C
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYN-------AGFC 84
Query: 726 N----IVCTQPRRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTT 781
I TQPRRIAA++VA+RVA+E CE G + VGY +R D + T+L + T
Sbjct: 85 REGKMIGITQPRRIAAVTVAKRVAEE-CEVQLGQK---VGYSIRFDDTTSGSTRLKYMTD 140
Query: 782 GILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTK-------- 833
G+LLR+ + D +L+ + IIVDE H+RS+ D LL +LK + RS S K
Sbjct: 141 GLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVAS 200
Query: 834 ----------------------------LKVILMSATVDATLFSRYFGHCPVVTAEGRTH 865
LK+I+MSA++DA +FS YFG V +GR
Sbjct: 201 QVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQF 260
Query: 866 PV 867
PV
Sbjct: 261 PV 262
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 211/491 (42%), Gaps = 77/491 (15%)
Query: 963 DLLEDLICFIDETHGE---GAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPL--HS 1017
D ++ + I + H E G ILVFL G EI ++ + Q + ++PL S
Sbjct: 273 DYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFS 332
Query: 1018 SVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSV 1077
++ S +Q +VF P RKV++ATNIAETSITI + YVID G K + S+
Sbjct: 333 ALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESL 392
Query: 1078 VDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKL 1137
S PG F LY FE+L + PE+ R L + LQ+K
Sbjct: 393 DVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTK-PEIKRCNLSNIILQLKA 451
Query: 1138 LSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVL-TPLGHHLAKLPVDVLIGK 1196
L + I F + ++ P A+ A++ L+ +GAL D L P+G+ +++LP++ + K
Sbjct: 452 LGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSK 509
Query: 1197 MMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDR 1256
++ F CL +L A LS +S F P+++++ +K N+ G
Sbjct: 510 ALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSK----NHFASVEG------- 558
Query: 1257 QSDHLLMMKAYEKWEKILNQKGT--------KAAQQFCNSYFLSSSVMLTIREMRVQFGT 1308
DHL + Y + ++ L ++ K +++C +++S + R++ Q
Sbjct: 559 --DHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIRE 616
Query: 1309 LLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAG 1368
+ IG FN+ S + +L C
Sbjct: 617 HVEQIG----------------------------FNVSSCGNDMLAFRRC---------- 638
Query: 1369 EQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVFLEKVET 1428
+AA+ +++ G + VH+HP+S+ K ++F E ++T
Sbjct: 639 ----LAASF--FLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKP---ECVIFNELMQT 689
Query: 1429 NKVFLRDTSVI 1439
+K ++++ ++I
Sbjct: 690 SKKYIKNLTII 700
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 207/466 (44%), Gaps = 51/466 (10%)
Query: 978 EGAILVFLPGVSEINNLYDKL---VASHQFGGQSSDWVIPLHSSVASTEQKRVFLRPPGN 1034
EG IL+F+ G +I L +L V S G + PLH S+ Q RVF PP N
Sbjct: 213 EGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPN 272
Query: 1035 IRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXXXXX 1094
R+ +++TNIAETS+T+D VVYVID G K+ + S+ IS
Sbjct: 273 CRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRA 332
Query: 1095 XXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEALEPP 1154
+PG C+ LY + +PE+ R L L +K L L I + L+ P
Sbjct: 333 GRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAP 392
Query: 1155 KNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVS 1214
+E+++ A+ LY + A++ + +T +G ++ LP++ + + ++ GCLS L+V
Sbjct: 393 SSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVV 452
Query: 1215 AFLSYKSPFIYPKDEKQNVERAKLALLNYKIDGSGDTNDMDRQSDHLLMMKAYEKWEKIL 1274
A LS ++ + P K + ++ K + +GSG DH+ +++ +E W++
Sbjct: 453 AMLSAETTLL-PARSKPSEKKRKHDEDSNLPNGSG-------YGDHIQLLQIFESWDR-- 502
Query: 1275 NQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDS 1334
T +C + M+ ++++R Q ++ I L + DG+K + D
Sbjct: 503 ----TNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRL--EVGADGRKSSSRDD 556
Query: 1335 VLCDASQPFNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLW 1394
Y L+ LC G +A + N Y RTL
Sbjct: 557 -----------YRK----LRKALCVGNANQIAE-------------RMLRHNGY--RTLS 586
Query: 1395 FDGRREVHVHPSSINSNTKAFQYP-FIVFLEKVETNKVFLRDTSVI 1439
F + V VHPSS+ S P ++V+ E + T + F+R+ +
Sbjct: 587 FQSQL-VQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAV 631
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 12/195 (6%)
Query: 673 ATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQP 732
A LPI + I++ +++N V+V+ GETGSGK+TQ+ Q + G I TQP
Sbjct: 2 ANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQI----LHRHGYTKSGVIAITQP 57
Query: 733 RRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDR 792
RR+AA+SVA RVA E P G VGY +R + KT++ + T G+LLR+ + +
Sbjct: 58 RRVAAVSVARRVAQELDVP----LGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNP 113
Query: 793 NLTGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYF 852
L + II+DE HERSL D LL ++K LV R ++ KV++ SAT+D S +F
Sbjct: 114 MLDDYSVIILDEAHERSLNTDILLGLVKRLVRIR----ASNFKVLITSATLDGEKVSEFF 169
Query: 853 GHCPVVTAEGRTHPV 867
CPV+ G+ +PV
Sbjct: 170 SGCPVLNVPGKLYPV 184
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 12/197 (6%)
Query: 675 LPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRR 734
LPI A + IL+ + ++V+ GETGSGK+TQ+ QF+ D SG+ +IVCTQPR+
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLAD----SGVAASESIVCTQPRK 361
Query: 735 IAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNL 794
IAA+++A+RV R E S + + V S + +K+++ T LL+ M DR+L
Sbjct: 362 IAAMTLADRV---REESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSL 418
Query: 795 TGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGH 854
+GI+ +I+DE HERSL D LL +LK L+ +R L++++MSAT DA S+YF
Sbjct: 419 SGISCVIIDEAHERSLNTDLLLALLKKLLSRR-----IDLRLVIMSATADAKQLSQYFFS 473
Query: 855 CPVVTAEGRTHPVTTSF 871
C ++ GR PV +
Sbjct: 474 CGILLVNGRNFPVEIVY 490
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 147/320 (45%), Gaps = 40/320 (12%)
Query: 972 IDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRP 1031
I +T EG IL FL +E+ ++ + S +PLH ++ EQ RVF
Sbjct: 518 IHKTEKEGTILAFLTSQAEVEWACERFITP-------SAIALPLHGKLSFEEQFRVFQNH 570
Query: 1032 PGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXX 1091
PG RKV+ ATNIAETS+TI V YVID G KE+ + +S + +S
Sbjct: 571 PGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRA 629
Query: 1092 XXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEAL 1151
+PG C+ LY+++ F+ M Q PE+ R+ L L++ L + +I F +
Sbjct: 630 GRAGRTEPGRCYRLYSKNDFDS-MNLNQEPEIRRVHLGVALLRMLALGVNNIAEF--NFV 686
Query: 1152 EPPKNEAMDTAVSLLYEVGAL---EGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS 1208
+ P EA+ AV L ++GA+ G LT GH L KL ++ +GK++L GC
Sbjct: 687 DAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLIL-----GCFR 741
Query: 1209 PILS----VSAFLSYKSPFIYPK----DEKQNVERAKLALLNYKIDGSGDTNDMDRQSDH 1260
+ V A + + I+ + D+K +R K+ N + D
Sbjct: 742 HRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCN-------------QNGDL 788
Query: 1261 LLMMKAYEKWEKILNQKGTK 1280
++ Y++W + ++ K
Sbjct: 789 FTLLSVYKEWASLPRERRNK 808
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 675 LPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQPRR 734
LPI A + IL+ + ++V+ GETGSGK+TQ+ QF+ D SG+ +IVCTQPR+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLAD----SGVAASESIVCTQPRK 358
Query: 735 IAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDRNL 794
IAA+++ +RV R E S + + V S + +K+++ T LL+ M DR+L
Sbjct: 359 IAAMTLTDRV---REESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSL 415
Query: 795 TGITHIIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSRYFGH 854
+GI+ +I+DE HERSL D L + ++ L++++MSAT DA S+Y
Sbjct: 416 SGISCVIIDEAHERSLNTD-----LLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFD 470
Query: 855 CPVVTAEGRTHPVTTSF 871
C ++ GR PV +
Sbjct: 471 CGILHVNGRNFPVEIVY 487
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 147/320 (45%), Gaps = 40/320 (12%)
Query: 972 IDETHGEGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVASTEQKRVFLRP 1031
I +T EG IL FL +E+ ++ VA S +PLH ++ EQ VF
Sbjct: 515 IHKTEKEGTILAFLTSQAEVEWACERFVAP-------SAIALPLHGKLSFEEQFMVFQNY 567
Query: 1032 PGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDDWISXXXXXXXX 1091
PG RKV+ ATNIAETS+TI V YVID G KE+ + +S + +S
Sbjct: 568 PGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRA 626
Query: 1092 XXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSEAL 1151
+PG C+ LY++ F+ M Q PE+ R+ L L++ L + +I F E +
Sbjct: 627 GRAGRTEPGRCYRLYSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAF--EFV 683
Query: 1152 EPPKNEAMDTAVSLLYEVGAL---EGDEVLTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS 1208
+ P EA+ A+ L ++GA+ G LT GH L KL ++ +GK++L GC
Sbjct: 684 DAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLIL-----GCFR 738
Query: 1209 PILS----VSAFLSYKSPFIYPK----DEKQNVERAKLALLNYKIDGSGDTNDMDRQSDH 1260
+ V A + + I+ + D+K +R K+ N D D+
Sbjct: 739 HRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCN-------DNGDL------ 785
Query: 1261 LLMMKAYEKWEKILNQKGTK 1280
++ Y++W + + K
Sbjct: 786 FTLLSVYKEWASLPRDRRNK 805
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 38/237 (16%)
Query: 664 RYQDMSKFRATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGG 723
R ++ + R LPI ++ +I++ + + +++ G+TG GKTTQVPQF + E+G G
Sbjct: 230 RPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQF----LYEAGFGS 285
Query: 724 -----HCNIV-CTQPRRIAAISVAERVADERCEPSPGLQ-GSLVGYQVRLDSAKNEKTKL 776
I+ TQPRR+A ++ A+RVA E G++ G VG+QVR D E + +
Sbjct: 286 KQFSSRSGIIGITQPRRVAVLATAKRVAFEL-----GVRLGKEVGFQVRYDKKIGENSSI 340
Query: 777 LFCTTGILLRKLMGDRNLTGITHIIVDEVHERSLLGDFLLIVLKDLV---------EKRS 827
F T GILLR++ D L + II+DE HERSL D L+ +L ++ +++S
Sbjct: 341 KFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKS 400
Query: 828 TESS---------TKLKVILMSATVDATLF---SRYFGHC-PVVTAEGRTHPVTTSF 871
+S T LK+ILMSAT+ F R F + P++ R +PVT F
Sbjct: 401 LQSGGTVTSECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHF 457
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 1012 VIPLHSSVASTEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQ 1071
V+PL++ ++ Q RVF R VV+ATN+AETS+TI + YV+D GR K ++
Sbjct: 649 VLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSK 708
Query: 1072 MKLSSVVDDWISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVEL 1131
+ S DWIS PG C+ LY+ F + +PE++++P+ +
Sbjct: 709 TGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGV 768
Query: 1132 CLQIKLLSLGHIK--PFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAKLP 1189
L +K +++ ++ PF + PP+ A+ A L + AL+ + LTPLG ++ P
Sbjct: 769 ILLMKSMNIPKVENFPFPT----PPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYP 824
Query: 1190 VDVLIGKMML 1199
+ +M+L
Sbjct: 825 MSPRHSRMLL 834
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 108/182 (59%), Gaps = 19/182 (10%)
Query: 673 ATLPIAALKGDILQLLKENDVLVVCGETGSGKTTQVPQFILDDMIESGLGGHCNIVCTQP 732
A+LPI A+K I+ + EN V ++ GE G GK++QVPQF+L+ I+CTQP
Sbjct: 24 ASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLE-------ANMAPILCTQP 76
Query: 733 RRIAAISVAERVADERCEPSPGLQGSLVGYQVRLDSAKNEKTKLLFCTTGILLRKLMGDR 792
RR A ++VA+ VA R + L G +GY + E +K+LF T G+LL +++ D+
Sbjct: 77 RRFAVVAVAKMVAKSR---NSDLGGE-IGYHIGHSKILTEGSKILFKTAGVLLDEML-DK 131
Query: 793 NLTGITH--IIVDEVHERSLLGDFLLIVLKDLVEKRSTESSTKLKVILMSATVDATLFSR 850
L + + II+DEVHERS+ D +L+ +K + K + L+V+LMSAT D T +
Sbjct: 132 GLNALKYKVIILDEVHERSVESDLVLVCVKQFLMK-----NNDLRVVLMSATADITRYRD 186
Query: 851 YF 852
YF
Sbjct: 187 YF 188
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 37/333 (11%)
Query: 963 DLLEDLICFIDETHG--EGAILVFLPGVSEINNLYDKLVASHQFGGQSSDWVIPLHSSVA 1020
+L+ DLI +I E E +ILVFLP + Y +L +S V LH S+
Sbjct: 253 NLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFF-----ASFEVHILHRSI- 306
Query: 1021 STEQKRVFLRPPGNIRKVVIATNIAETSITIDDVVYVIDCGRPKENGSYAQMKLSSVVDD 1080
TEQ ++ + RKV++ATNIAE+S+TI V YVID R + K +V
Sbjct: 307 DTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLV 366
Query: 1081 WISXXXXXXXXXXXXXVKPGICFCLYTRHRFERLMRPYQVPEMLRMPLVELCLQIKLL-- 1138
W+S G + L F +L ++ P +L++ L + L I
Sbjct: 367 WVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKL-EEHEPPSILKLSLRQQVLHICCTES 425
Query: 1139 -SLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGAL----EGDEVLTPLGHHLAKLPV--- 1190
++ L++A++PP + +D A+ +L + AL G T G LA P+
Sbjct: 426 RAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFD 485
Query: 1191 -DVLIGK-----MMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQNVERAKLALLNYK 1244
+L+ K M+ G + G L L + P +P + + L +++
Sbjct: 486 ASILVVKFGEMGMLRQGILLGVLMDTLPL--------PIHHPFGD----DSLFLEYVDHY 533
Query: 1245 IDGSGDTNDMDRQSDHLLMMKAYEKWEKILNQK 1277
GS + R+ + A++ W+++ K
Sbjct: 534 FGGSKTISGGRREMVLMANFCAFQFWQRVFKDK 566
>AT5G14900.1 | Symbols: | helicase associated (HA2) domain-containing
protein | chr5:4822676-4823581 REVERSE LENGTH=301
Length = 301
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 68/315 (21%)
Query: 1128 LVELCLQIKLLSLGHIKPFLSEALEPPKNEAMDTAVSLLYEVGALEGDEVLTPLGHHLAK 1187
L L +K LS+ ++ F + ++ P + + A+ LY +GAL+ D LT G +++
Sbjct: 4 LANTVLTLKGLSVKNLVRF--DLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 1188 LPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPFIYPKDEKQN-VERAKLALLNYKID 1246
P+D + KM++ F C + ILS+SA LS + FI P+ E Q + AK + + ID
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAH--ID 119
Query: 1247 GSGDTNDMDRQSDHLLMMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQF 1306
G DHL ++ + + + NQ +F N + S+V ++RE V+
Sbjct: 120 G-----------DHLTLLNLFHAFLQN-NQDPNWCCTKFINYRAMKSAV--SVREQLVRI 165
Query: 1307 GTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQPFNIYSHHSSVLKAILCAGLYPNVA 1366
+ + LC S FN ++ ++ KA+L AG + VA
Sbjct: 166 ----------------------MLRFQIKLC--SPDFNSRDYYVNIRKALL-AGYFMQVA 200
Query: 1367 AGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRRE--VHVHPSSINSNTKAFQYPFIVFLE 1424
E+ +G L F + + VH+HP SN + ++V+ E
Sbjct: 201 HLER------------------TGHYLTFRDKDDQVVHLHP----SNCLDHKPEWVVYNE 238
Query: 1425 KVETNKVFLRDTSVI 1439
V T++ F+R + I
Sbjct: 239 YVFTSRNFIRTVTHI 253