Miyakogusa Predicted Gene
- Lj0g3v0194689.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0194689.1 tr|C1E5T5|C1E5T5_MICSR Mitochondrial carrier
family OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,31.76,0.000000001,Mitochondrial carrier,Mitochondrial carrier
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;,CUFF.13191.1
(303 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22500.1 | Symbols: UCP5, ATPUMP5, DIC1 | uncoupling protein ... 335 3e-92
AT4G24570.1 | Symbols: DIC2 | dicarboxylate carrier 2 | chr4:126... 302 2e-82
AT5G09470.1 | Symbols: DIC3 | dicarboxylate carrier 3 | chr5:294... 228 4e-60
AT5G19760.1 | Symbols: | Mitochondrial substrate carrier family... 142 2e-34
AT3G54110.1 | Symbols: ATPUMP1, UCP, PUMP1, ATUCP1, UCP1 | plant... 124 7e-29
AT5G58970.1 | Symbols: ATUCP2, UCP2 | uncoupling protein 2 | chr... 117 1e-26
AT1G14140.1 | Symbols: | Mitochondrial substrate carrier family... 110 1e-24
AT5G58970.2 | Symbols: ATUCP2, UCP2 | uncoupling protein 2 | chr... 110 1e-24
AT4G03115.1 | Symbols: | Mitochondrial substrate carrier family... 85 7e-17
>AT2G22500.1 | Symbols: UCP5, ATPUMP5, DIC1 | uncoupling protein 5 |
chr2:9563531-9564472 REVERSE LENGTH=313
Length = 313
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 199/283 (70%), Gaps = 19/283 (6%)
Query: 1 MGLKGFAEGGIASIIAGCSTHPLDLIKVRMQLQGEANAAPKPVQ-QLRPALAFQNGSTIH 59
MGLKGFAEGGIASI+AGCSTHPLDLIKVRMQLQGE+ P+Q LRPALAFQ +T++
Sbjct: 1 MGLKGFAEGGIASIVAGCSTHPLDLIKVRMQLQGES----APIQTNLRPALAFQTSTTVN 56
Query: 60 VAAHXXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGLYDI 119
I VG RL+++EG+RALFSGVSATVLRQ LYSTTRMGLYDI
Sbjct: 57 APP------------LRVGVIGVGSRLIREEGMRALFSGVSATVLRQTLYSTTRMGLYDI 104
Query: 120 LKQKWSN--GGNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPAAQRRNYSSV 177
+K +W++ MPL +K DVAMVRMQADGRLP RRNY SV
Sbjct: 105 IKGEWTDPETKTMPLMKKIGAGAIAGAIGAAVGNPADVAMVRMQADGRLPLTDRRNYKSV 164
Query: 178 VDAITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLGTHVT 237
+DAIT+M + EGVTSLWRGSSLT+NRAMLVT+SQLASYD KE ILEKGL++DGLGTHV+
Sbjct: 165 LDAITQMIRGEGVTSLWRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLGTHVS 224
Query: 238 XXXXXXXXXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDCA 280
NPVDVIKTRVMNMKV G PPY GA+DCA
Sbjct: 225 ASFAAGFVASVASNPVDVIKTRVMNMKVVAGVAPPYKGAVDCA 267
>AT4G24570.1 | Symbols: DIC2 | dicarboxylate carrier 2 |
chr4:12686546-12687487 FORWARD LENGTH=313
Length = 313
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/282 (59%), Positives = 187/282 (66%), Gaps = 15/282 (5%)
Query: 1 MGLKGFAEGGIASIIAGCSTHPLDLIKVRMQLQGEANAAPKPVQQLRPALAFQNGSTIHV 60
MG+K F EGGIAS+IAGCSTHPLDLIKVR+QL GEA + V LRPALAF N S
Sbjct: 1 MGVKSFVEGGIASVIAGCSTHPLDLIKVRLQLHGEAPSTTT-VTLLRPALAFPNSSP--- 56
Query: 61 AAHXXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGLYDIL 120
IS+G+ +V+ EG ALFSGVSAT+LRQ LYSTTRMGLY++L
Sbjct: 57 ----AAFLETTSSVPKVGPISLGINIVKSEGAAALFSGVSATLLRQTLYSTTRMGLYEVL 112
Query: 121 KQKWSN--GGNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPAAQRRNYSSVV 178
K KW++ G + LSRK DVAMVRMQADGRLP AQRRNY+ V
Sbjct: 113 KNKWTDPESGKLNLSRKIGAGLVAGGIGAAVGNPADVAMVRMQADGRLPLAQRRNYAGVG 172
Query: 179 DAITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLGTHVTX 238
DAI M K EGVTSLWRGS+LT+NRAM+VTA+QLASYDQFKE ILE G+M DGLGTHV
Sbjct: 173 DAIRSMVKGEGVTSLWRGSALTINRAMIVTAAQLASYDQFKEGILENGVMNDGLGTHVVA 232
Query: 239 XXXXXXXXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDCA 280
NPVDVIKTRVMNMKV GA Y GA DCA
Sbjct: 233 SFAAGFVASVASNPVDVIKTRVMNMKV--GA---YDGAWDCA 269
>AT5G09470.1 | Symbols: DIC3 | dicarboxylate carrier 3 |
chr5:2949241-2950513 REVERSE LENGTH=337
Length = 337
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 174/298 (58%), Gaps = 25/298 (8%)
Query: 1 MGLKGFAEGGIASIIAGCSTHPLDLIKVRMQLQGE------ANAAPK-------PVQQLR 47
MG K F EGGIA+IIAG THPLDLIKVRMQLQGE N P PV+ R
Sbjct: 1 MGFKPFLEGGIAAIIAGALTHPLDLIKVRMQLQGEHSFSLDQNPNPNLSLDHNLPVKPYR 60
Query: 48 PALAFQN--GSTIHVAAHXXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLR 105
P A + GS + H +VG +V+ EG ALFSGVSAT+LR
Sbjct: 61 PVFALDSLIGSISLLPLHIHAPSSSTRSVMTP--FAVGAHIVKTEGPAALFSGVSATILR 118
Query: 106 QMLYSTTRMGLYDILKQKWSN--GGNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQAD 163
QMLYS TRMG+YD LK++W++ GN PL K DVAMVRMQAD
Sbjct: 119 QMLYSATRMGIYDFLKRRWTDQLTGNFPLVTKITAGLIAGAVGSVVGNPADVAMVRMQAD 178
Query: 164 GRLPAAQRRNYSSVVDAITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMIL 223
G LP +RRNY SVVDAI R+A+QEGV+SLWRGS LTVNRAM+VTASQLA+YD KE+++
Sbjct: 179 GSLPLNRRRNYKSVVDAIDRIARQEGVSSLWRGSWLTVNRAMIVTASQLATYDHVKEILV 238
Query: 224 -EKGLMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDCA 280
G+GTHV NP+DV+KTR+MN E Y G LDCA
Sbjct: 239 AGGRGTPGGIGTHVAASFAAGIVAAVASNPIDVVKTRMMNADKE-----IYGGPLDCA 291
>AT5G19760.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr5:6679591-6681845 REVERSE LENGTH=298
Length = 298
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 138/293 (47%), Gaps = 57/293 (19%)
Query: 3 LKGFAEGGIASIIAGCSTHPLDLIKVRMQLQGEANAAPKPVQQLRPALAFQNGSTIHVAA 62
+K F GG + ++A C P+D+IKVR+QL G+ +AA
Sbjct: 15 VKPFVNGGASGMLATCVIQPIDMIKVRIQL-GQGSAA----------------------- 50
Query: 63 HXXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGLYDILKQ 122
S+ +++ EG+ A + G+SA +LRQ Y+T R+G + +L
Sbjct: 51 ------------------SITTNMLKNEGVGAFYKGLSAGLLRQATYTTARLGSFKLLTA 92
Query: 123 KW---SNGGNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPAAQRRNYSSVVD 179
K ++G +PL +K D+A++RMQAD LP AQRRNY++
Sbjct: 93 KAIESNDGKPLPLYQKALCGLTAGAIGACVGSPADLALIRMQADNTLPLAQRRNYTNAFH 152
Query: 180 AITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLG-----T 234
A+TR++ EGV +LW+G TV RAM + LASYDQ E MRD LG T
Sbjct: 153 ALTRISADEGVLALWKGCGPTVVRAMALNMGMLASYDQSAE------YMRDNLGFGEMST 206
Query: 235 HVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDCA-GTLHRG 286
V P D +KT++ M+ + + PY G+LDCA TL G
Sbjct: 207 VVGASAVSGFCAAACSLPFDFVKTQIQKMQPDAQGKYPYTGSLDCAMKTLKEG 259
>AT3G54110.1 | Symbols: ATPUMP1, UCP, PUMP1, ATUCP1, UCP1 | plant
uncoupling mitochondrial protein 1 |
chr3:20038890-20040996 FORWARD LENGTH=306
Length = 306
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 129/279 (46%), Gaps = 39/279 (13%)
Query: 4 KGFAEGGIASIIAGCSTHPLDLIKVRMQLQGEANAAPKPVQQLRPALAFQNGSTIHVAAH 63
K FA A+ + T PLD KVR+QLQ A A + + R L
Sbjct: 13 KTFACSAFAACVGEVCTIPLDTAKVRLQLQKSALAGDVTLPKYRGLLG------------ 60
Query: 64 XXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGLYDILKQK 123
+VG + ++EGLR+L+ GV + RQ L+ R+G+Y+ +K
Sbjct: 61 -----------------TVGT-IAREEGLRSLWKGVVPGLHRQCLFGGLRIGMYEPVKNL 102
Query: 124 WSNG---GNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPAAQRRNYSSVVDA 180
+ G++PLS+K D+ VR+QA+G+L A R YS ++A
Sbjct: 103 YVGKDFVGDVPLSKKILAGLTTGALGIMVANPTDLVKVRLQAEGKLAAGAPRRYSGALNA 162
Query: 181 ITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLGTHVTXXX 240
+ + +QEGV +LW G V R ++ A++LASYDQ KE IL+ D + TH+
Sbjct: 163 YSTIVRQEGVRALWTGLGPNVARNAIINAAELASYDQVKETILKIPGFTDNVVTHILSGL 222
Query: 241 XXXXXXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDC 279
+PVDV+K+R+M G Y G +DC
Sbjct: 223 GAGFFAVCIGSPVDVVKSRMM------GDSGAYKGTIDC 255
>AT5G58970.1 | Symbols: ATUCP2, UCP2 | uncoupling protein 2 |
chr5:23808642-23811018 REVERSE LENGTH=305
Length = 305
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 125/286 (43%), Gaps = 53/286 (18%)
Query: 6 FAEGGIASIIAGC----STHPLDLIKVRMQLQ-----GEANAAPKPVQQLRPALAFQNGS 56
F E I S A C T PLD KVR+QLQ G+ PK GS
Sbjct: 12 FLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPK-----------YRGS 60
Query: 57 TIHVAAHXXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGL 116
+A + ++EG+ L+ GV A + RQ +Y R+GL
Sbjct: 61 IGTLAT-----------------------IAREEGISGLWKGVIAGLHRQCIYGGLRIGL 97
Query: 117 YDILKQKWSNG---GNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPAAQRRN 173
Y+ +K G++PL +K D+ VR+Q++G+LPA R
Sbjct: 98 YEPVKTLLVGSDFIGDIPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRR 157
Query: 174 YSSVVDAITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLG 233
Y+ VDA + K EGV++LW G + R +V A++LASYDQ KE I++ RD +
Sbjct: 158 YAGAVDAYFTIVKLEGVSALWTGLGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVL 217
Query: 234 THVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDC 279
TH+ +P+DV+K+R+M + Y +DC
Sbjct: 218 THLLAGLAAGFFAVCIGSPIDVVKSRMMG-------DSTYRNTVDC 256
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 154 DVAMVRMQADGRLPAAQRRN---YSSVVDAITRMAKQEGVTSLWRGSSLTVNRAMLVTAS 210
D A VR+Q ++P N Y + + +A++EG++ LW+G ++R +
Sbjct: 34 DTAKVRLQLQRKIPTGDGENLPKYRGSIGTLATIAREEGISGLWKGVIAGLHRQCIYGGL 93
Query: 211 QLASYDQFKEMILEKGLMRD-GLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEPGA 269
++ Y+ K +++ + D L + NP D++K R+ + P
Sbjct: 94 RIGLYEPVKTLLVGSDFIGDIPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAG 153
Query: 270 EP-PYAGALDCAGTLHR 285
P YAGA+D T+ +
Sbjct: 154 VPRRYAGAVDAYFTIVK 170
>AT1G14140.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr1:4838131-4839602 REVERSE LENGTH=305
Length = 305
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 43/275 (15%)
Query: 11 IASIIAGCSTHPLDLIKVRMQLQGEANAAPKPVQQLRPALAFQNGSTIHVAAHXXXXXXX 70
+++++A T P+DL K RMQL G +A+ AH
Sbjct: 21 LSAMVAESVTFPIDLTKTRMQLHGSGSAS---------------------GAHRIGA--- 56
Query: 71 XXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGLYD-----ILKQKWS 125
V + ++EG+ L+ G+S ++R + Y+ R+ Y+ I++ + +
Sbjct: 57 ---------FGVVSEIARKEGVIGLYKGLSPAIIRHLFYTPIRIIGYENLKGLIVRSETN 107
Query: 126 NGGNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPA-AQRRNYSSVVDAITRM 184
N ++PL+ K D+ VRMQADGRL + + YS ++A T++
Sbjct: 108 NSESLPLATKALVGGFSGVIAQVVASPADLVKVRMQADGRLVSQGLKPRYSGPIEAFTKI 167
Query: 185 AKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLGTHVTXXXXXXX 244
+ EGV LW+G + RA LV +LA YD K +++K + D + H
Sbjct: 168 LQSEGVKGLWKGVLPNIQRAFLVNMGELACYDHAKHFVIDKKIAEDNIFAHTLASIMSGL 227
Query: 245 XXXXXXNPVDVIKTRVMNMKVEPGAEPPYAGALDC 279
P DV+KTR+MN G Y + DC
Sbjct: 228 ASTSLSCPADVVKTRMMNQ----GENAVYRNSYDC 258
>AT5G58970.2 | Symbols: ATUCP2, UCP2 | uncoupling protein 2 |
chr5:23809437-23811018 REVERSE LENGTH=272
Length = 272
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 114/263 (43%), Gaps = 46/263 (17%)
Query: 6 FAEGGIASIIAGC----STHPLDLIKVRMQLQ-----GEANAAPKPVQQLRPALAFQNGS 56
F E I S A C T PLD KVR+QLQ G+ PK GS
Sbjct: 12 FLETFICSAFAACFAELCTIPLDTAKVRLQLQRKIPTGDGENLPK-----------YRGS 60
Query: 57 TIHVAAHXXXXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGL 116
I + ++EG+ L+ GV A + RQ +Y R+GL
Sbjct: 61 -----------------------IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGL 97
Query: 117 YDILKQKWSNG---GNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQADGRLPAAQRRN 173
Y+ +K G++PL +K D+ VR+Q++G+LPA R
Sbjct: 98 YEPVKTLLVGSDFIGDIPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRR 157
Query: 174 YSSVVDAITRMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLG 233
Y+ VDA + K EGV++LW G + R +V A++LASYDQ KE I++ RD +
Sbjct: 158 YAGAVDAYFTIVKLEGVSALWTGLGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVL 217
Query: 234 THVTXXXXXXXXXXXXXNPVDVI 256
TH+ +P+DV+
Sbjct: 218 THLLAGLAAGFFAVCIGSPIDVV 240
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 154 DVAMVRMQADGRLPAAQRRN---YSSVVDAITRMAKQEGVTSLWRGSSLTVNRAMLVTAS 210
D A VR+Q ++P N Y + + +A++EG++ LW+G ++R +
Sbjct: 34 DTAKVRLQLQRKIPTGDGENLPKYRGSIGTLATIAREEGISGLWKGVIAGLHRQCIYGGL 93
Query: 211 QLASYDQFKEMILEKGLMRD-GLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMKVEPGA 269
++ Y+ K +++ + D L + NP D++K R+ + P
Sbjct: 94 RIGLYEPVKTLLVGSDFIGDIPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAG 153
Query: 270 EP-PYAGALDCAGTL 283
P YAGA+D T+
Sbjct: 154 VPRRYAGAVDAYFTI 168
>AT4G03115.1 | Symbols: | Mitochondrial substrate carrier family
protein | chr4:1383366-1385485 REVERSE LENGTH=314
Length = 314
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 49/259 (18%)
Query: 6 FAEGGIASIIAGCSTHPLDLIKVRMQLQGEANAAPKPVQQLRPALAFQNGSTIHVAAHXX 65
F GI+ +A THPLD++KVR+Q+Q Q G I +
Sbjct: 38 FGISGISVALATGVTHPLDVVKVRLQMQHVG----------------QRGPLIGMTG--- 78
Query: 66 XXXXXXXXXXXXXXISVGVRLVQQEGLRALFSGVSATVLRQMLYSTTRMGLYDILKQK-- 123
+ ++L++ EG R+L+ G++ + R +LY R+GLY+ K
Sbjct: 79 ----------------IFLQLMKNEGRRSLYLGLTPALTRSVLYGGLRLGLYEPTKVSFD 122
Query: 124 WSNGGNMPLSRKXXXXXXXXXXXXXXXXXXDVAMVRMQAD-GRLPAAQRRNYSSVVDAIT 182
W+ G L K +V VR+Q + +P A+ R S
Sbjct: 123 WAFGSTNVLV-KIASGAFAGAFSTALTNPVEVVKVRLQMNPNAVPIAEVREIVS------ 175
Query: 183 RMAKQEGVTSLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGLMRDGLGTHVTXXXXX 242
+EG+ +LW+G + RA +TASQLA+YD+ K +++++ + +G H+
Sbjct: 176 ----KEGIGALWKGVGPAMVRAAALTASQLATYDEAKRILVKRTSLEEGFHLHLCSSVVA 231
Query: 243 XXXXXXXXNPVDVIKTRVM 261
P+D+IKTR+M
Sbjct: 232 GLVSTLITAPMDMIKTRLM 250