Miyakogusa Predicted Gene
- Lj0g3v0194229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0194229.1 tr|Q6ZGL7|Q6ZGL7_ORYSJ Glutamate receptor
OS=Oryza sativa subsp. japonica GN=OJ1442_E05.29 PE=3
SV=1,59.49,4e-19,GLUTAMATE RECEPTOR 3 PLANT,NULL; IONOTROPIC GLUTAMATE
RECEPTOR,NULL,CUFF.12281.1
(90 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35290.1 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutam... 102 5e-23
AT4G35290.2 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutam... 102 5e-23
AT2G17260.1 | Symbols: GLR2, ATGLR2, GLR3.1, ATGLR3.1 | glutamat... 100 3e-22
AT3G51480.1 | Symbols: ATGLR3.6, GLR3.6 | glutamate receptor 3.6... 95 1e-20
AT1G42540.1 | Symbols: ATGLR3.3, GLR3.3 | glutamate receptor 3.3... 92 6e-20
AT1G05200.2 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate recep... 86 6e-18
AT1G05200.1 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate recep... 86 6e-18
AT2G32400.1 | Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate recept... 68 1e-12
AT2G32390.3 | Symbols: GLR3.5 | glutamate receptor 3.5 | chr2:1... 67 2e-12
AT2G32390.2 | Symbols: ATGLR3.5, GLR3.5, GLR6 | glutamate recept... 67 2e-12
AT2G32390.1 | Symbols: ATGLR3.5, GLR3.5, GLR6 | glutamate recept... 67 3e-12
AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor 2.8... 48 2e-06
>AT4G35290.1 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutamate
receptor 2 | chr4:16790290-16793461 FORWARD LENGTH=912
Length = 912
Score = 102 bits (254), Expect = 5e-23, Method: Composition-based stats.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 16/106 (15%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKAC----GFRNNED-EQLQLHSFRGLFLICGITCFL 55
MSTAIL LSE G+L++I +KWLS C G ++ED EQL+L SF GLFL+CGI+CF+
Sbjct: 783 MSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFI 842
Query: 56 ALLIYFFSIVRQFSQN----------TPHKDRSR-IQTFLNFVDEK 90
AL IYFF IVR F ++ +P RS+ +QTFL + DEK
Sbjct: 843 ALFIYFFKIVRDFFRHGKYDEEATVPSPESSRSKSLQTFLAYFDEK 888
>AT4G35290.2 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutamate
receptor 2 | chr4:16790290-16793461 FORWARD LENGTH=912
Length = 912
Score = 102 bits (254), Expect = 5e-23, Method: Composition-based stats.
Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 16/106 (15%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKAC----GFRNNED-EQLQLHSFRGLFLICGITCFL 55
MSTAIL LSE G+L++I +KWLS C G ++ED EQL+L SF GLFL+CGI+CF+
Sbjct: 783 MSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFI 842
Query: 56 ALLIYFFSIVRQFSQN----------TPHKDRSR-IQTFLNFVDEK 90
AL IYFF IVR F ++ +P RS+ +QTFL + DEK
Sbjct: 843 ALFIYFFKIVRDFFRHGKYDEEATVPSPESSRSKSLQTFLAYFDEK 888
>AT2G17260.1 | Symbols: GLR2, ATGLR2, GLR3.1, ATGLR3.1 | glutamate
receptor 2 | chr2:7504780-7508266 FORWARD LENGTH=951
Length = 951
Score = 99.8 bits (247), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 16/106 (15%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKAC----GFRNNEDEQLQLHSFRGLFLICGITCFLA 56
MSTAIL LSE GEL++I ++WLS+ C G ++ + EQL +HSF G+FL+ GI C +A
Sbjct: 813 MSTAILGLSETGELQKIHDRWLSKSNCSSPHGSQSGDSEQLNVHSFWGMFLVVGIACLVA 872
Query: 57 LLIYFFSIVRQFSQNTPH------------KDRSRIQTFLNFVDEK 90
L I+FF I+R F ++TP +++QTFL FVDEK
Sbjct: 873 LFIHFFKIIRDFCKDTPEVVVEEAIPSPKSSRLTKLQTFLAFVDEK 918
>AT3G51480.1 | Symbols: ATGLR3.6, GLR3.6 | glutamate receptor 3.6 |
chr3:19101256-19104681 FORWARD LENGTH=903
Length = 903
Score = 94.7 bits (234), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 12/102 (11%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDE--QLQLHSFRGLFLICGITCFLALL 58
+S AIL LSENG+++RIR+KWL KAC + E E +L+L SF GLF++CG+ C LAL
Sbjct: 776 VSAAILQLSENGDMQRIRDKWLLRKACSLQGAEIEVDRLELKSFWGLFVVCGVACVLALA 835
Query: 59 IYFFSIVRQFSQNTPHKDR----------SRIQTFLNFVDEK 90
+Y ++RQF Q P + +RI +FL+FV EK
Sbjct: 836 VYTVLMIRQFGQQCPEEAEGSIRRRSSPSARIHSFLSFVKEK 877
>AT1G42540.1 | Symbols: ATGLR3.3, GLR3.3 | glutamate receptor 3.3 |
chr1:15973489-15976703 FORWARD LENGTH=933
Length = 933
Score = 92.4 bits (228), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 17/107 (15%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDEQLQLH--SFRGLFLICGITCFLALL 58
+STAIL L+ENG+L+RI +KWL + AC N E E +LH SF GLFLICG+ C LAL
Sbjct: 786 LSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVACLLALF 845
Query: 59 IYFFSIVRQF-----------SQNTPHKDRS----RIQTFLNFVDEK 90
+YF I+RQ Q H S R+Q FL+ +DEK
Sbjct: 846 LYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEK 892
>AT1G05200.2 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor
3.4 | chr1:1505642-1509002 FORWARD LENGTH=959
Length = 959
Score = 85.5 bits (210), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 1 MSTAILSLSENGELRRIREKWLSEK-ACGFR--NNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL LSE GEL +I KWL+ K C + N+ED QL L SF GLFLICGITCF+AL
Sbjct: 814 MSTAILQLSEEGELEKIHRKWLNYKHECSMQISNSEDSQLSLKSFWGLFLICGITCFMAL 873
Query: 58 LIYFFSIVRQFSQNTP 73
++F+ + Q+ + P
Sbjct: 874 TVFFWRVFWQYQRLLP 889
>AT1G05200.1 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor
3.4 | chr1:1505642-1509002 FORWARD LENGTH=959
Length = 959
Score = 85.5 bits (210), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 1 MSTAILSLSENGELRRIREKWLSEK-ACGFR--NNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL LSE GEL +I KWL+ K C + N+ED QL L SF GLFLICGITCF+AL
Sbjct: 814 MSTAILQLSEEGELEKIHRKWLNYKHECSMQISNSEDSQLSLKSFWGLFLICGITCFMAL 873
Query: 58 LIYFFSIVRQFSQNTP 73
++F+ + Q+ + P
Sbjct: 874 TVFFWRVFWQYQRLLP 889
>AT2G32400.1 | Symbols: GLR5, GLR3.7, ATGLR3.7 | glutamate receptor
5 | chr2:13752665-13756233 REVERSE LENGTH=921
Length = 921
Score = 67.8 bits (164), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 20/110 (18%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNN---EDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL LSE +L+ IR+KWL + C ++N E QL L SF+GL+L+C A
Sbjct: 779 MSTAILKLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAF 838
Query: 58 LIYFFSIVRQF-----------------SQNTPHKDRSRIQTFLNFVDEK 90
L++ ++RQF S + + R + F+ FVDEK
Sbjct: 839 LVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEK 888
>AT2G32390.3 | Symbols: GLR3.5 | glutamate receptor 3.5 |
chr2:13748468-13751908 REVERSE LENGTH=898
Length = 898
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 1 MSTAILSLSENGELRRIREKWLS-EKACGFR--NNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL L+E G+L +IR+KWL+ + C + + E+ Q+ + SF GLFLICG+ F+AL
Sbjct: 752 MSTAILQLAEEGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWGLFLICGVVWFIAL 811
Query: 58 LIYFFSIVRQFSQNTPHK 75
++ + + Q+ + P +
Sbjct: 812 TLFCWKVFWQYQRLRPEE 829
>AT2G32390.2 | Symbols: ATGLR3.5, GLR3.5, GLR6 | glutamate receptor
3.5 | chr2:13748468-13751617 REVERSE LENGTH=851
Length = 851
Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 1 MSTAILSLSENGELRRIREKWLS-EKACGFR--NNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL L+E G+L +IR+KWL+ + C + + E+ Q+ + SF GLFLICG+ F+AL
Sbjct: 705 MSTAILQLAEEGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWGLFLICGVVWFIAL 764
Query: 58 LIYFFSIVRQFSQNTPHK 75
++ + + Q+ + P +
Sbjct: 765 TLFCWKVFWQYQRLRPEE 782
>AT2G32390.1 | Symbols: ATGLR3.5, GLR3.5, GLR6 | glutamate receptor
3.5 | chr2:13748468-13751757 REVERSE LENGTH=895
Length = 895
Score = 67.0 bits (162), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 1 MSTAILSLSENGELRRIREKWLS-EKACGFR--NNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL L+E G+L +IR+KWL+ + C + + E+ Q+ + SF GLFLICG+ F+AL
Sbjct: 749 MSTAILQLAEEGKLEKIRKKWLTYDHECTMQISDTENYQISVQSFWGLFLICGVVWFIAL 808
Query: 58 LIYFFSIVRQFSQNTPHK 75
++ + + Q+ + P +
Sbjct: 809 TLFCWKVFWQYQRLRPEE 826
>AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor 2.8 |
chr2:12506880-12510552 REVERSE LENGTH=947
Length = 947
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 1 MSTAILSLSENGELRRIREKW-LSEKACGFRNN--EDEQLQLHSFRGLFLICGITCFLAL 57
+S AIL++++ E++ I KW + + C +L L SF GLFLI GI FLAL
Sbjct: 773 VSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFLIAGIASFLAL 832
Query: 58 LIYFF 62
LI+ F
Sbjct: 833 LIFVF 837