Miyakogusa Predicted Gene
- Lj0g3v0193659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0193659.1 tr|D7MAH5|D7MAH5_ARALL F-box family protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_493343,27.58,8e-18,seg,NULL; EBF1 (EIN3-BINDING F BOX
PROTEIN 1), UBIQUITIN-PROTEIN LIGASE,NULL; F-BOX/LEUCINE RICH
REP,CUFF.12259.1
(474 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 461 e-130
AT5G51380.1 | Symbols: | RNI-like superfamily protein | chr5:20... 424 e-119
AT5G51370.2 | Symbols: | RNI-like superfamily protein | chr5:20... 402 e-112
AT5G51370.1 | Symbols: | RNI-like superfamily protein | chr5:20... 298 4e-81
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 82 1e-15
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 72 7e-13
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 54 3e-07
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 49 5e-06
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 49 9e-06
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/433 (55%), Positives = 291/433 (67%), Gaps = 16/433 (3%)
Query: 46 KSKTLTPNFTTTMDPTXXXXXXXXXXXXAKXXXXXXXXXXXXVCKRWLNLHGRLVRSLKI 105
KSKTL P+FT + + VCKRW LHGRLVRS K+
Sbjct: 53 KSKTLLPDFTLLLPDLILIRVIQKIPNSQRKNLSL-------VCKRWFRLHGRLVRSFKV 105
Query: 106 LDWNFVSSGRLTHRFPNLTHVDLVPACFHSPRNAAAAVFLSHRVASMRVAPG----WCFG 161
DW F+SSGRL RFPNL VDLV C SP N + ++HR+ S V G W F
Sbjct: 106 SDWEFLSSGRLISRFPNLETVDLVSGCLISPPNLG--ILVNHRIVSFTVGVGSYQSWSFF 163
Query: 162 EDNILPAEVIDGGLRVIANGCPNLRKLEVVGASEAGLACVGEECSTLQELELQRCDDEVL 221
E+N+L E+++ GL+ +A GC NLRKL V SE GL V EECS LQELEL +C D VL
Sbjct: 164 EENLLSVELVERGLKALAGGCSNLRKLVVTNTSELGLLNVAEECSRLQELELHKCSDSVL 223
Query: 222 RGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVKLELSGCEGSFDGIKAIG 281
G+G +NLQ+LR++ IGL ILAQGCKRLVKLEL GCEG FDGIK IG
Sbjct: 224 LGIGAFENLQILRLVGNVDGLYNSLVSDIGLMILAQGCKRLVKLELVGCEGGFDGIKEIG 283
Query: 282 QCCVMLEELTVVDHRMDGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLG-FCPALER 340
+CC MLEELTV D++M+ GWL GL +CENLKTL+ SCK ID +P +E L CPALER
Sbjct: 284 ECCQMLEELTVCDNKMESGWLGGLRYCENLKTLKLVSCKKIDNDP--DESLSCCCPALER 341
Query: 341 LHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICRRVELCYLEGCSLL 400
L L+KCQLRDKN A+F +C AARE++ QDCWGLDN + SLA+ RV+L YLEGCSLL
Sbjct: 342 LQLEKCQLRDKNTVKALFKMCEAAREIVFQDCWGLDNDIFSLAMAFGRVKLLYLEGCSLL 401
Query: 401 TTEGLELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLKELRWRPDTKHLLSSSLE 460
TT GLE VI W EL+ L+VVSCKNIKDS++SP+L+ LF+ L EL+WRPDT+ LSSSL
Sbjct: 402 TTSGLESVILHWHELEHLKVVSCKNIKDSEVSPSLSALFSALVELQWRPDTRSHLSSSLT 461
Query: 461 EISMGKKGGKFFR 473
+G+KGGKFF+
Sbjct: 462 GTGIGEKGGKFFK 474
>AT5G51380.1 | Symbols: | RNI-like superfamily protein |
chr5:20875945-20877779 FORWARD LENGTH=479
Length = 479
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/390 (55%), Positives = 272/390 (69%), Gaps = 6/390 (1%)
Query: 88 VCKRWLNLHGRLVRSLKILDWNFVSSGRLTHRFPNLTHVDLVPACFHSPRNAAAAVFLSH 147
VCKRWL++ GR +RS+K+ DW F+ SGRL RFP LT VDLV ACF+ N+ + L H
Sbjct: 90 VCKRWLSVQGRRLRSMKVFDWEFLLSGRLVSRFPKLTSVDLVNACFNPSSNSG--ILLCH 147
Query: 148 RVASMRVAP----GWCFGEDNILPAEVIDGGLRVIANGCPNLRKLEVVGASEAGLACVGE 203
S V+ F E+++L E++D GLRV+ G +L KL V+ A+E GL + E
Sbjct: 148 TSISFHVSTDSSLNLNFVEESLLDNEMVDKGLRVLGRGSFDLIKLVVINATELGLLSLAE 207
Query: 204 ECSTLQELELQRCDDEVLRGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLV 263
+CS LQELEL +C D +LRG+ C+NL+ LR++ IGLTILAQGCKRLV
Sbjct: 208 DCSDLQELELHKCSDNLLRGIAACENLRGLRLVGSVDGLYSSSVSDIGLTILAQGCKRLV 267
Query: 264 KLELSGCEGSFDGIKAIGQCCVMLEELTVVDHRMDGGWLAGLSFCENLKTLRFQSCKAID 323
KLELSGCEGSFDGIKAIGQCC +LEEL++ DHRMD GW+A LS+ E+LKTL SC+ ID
Sbjct: 268 KLELSGCEGSFDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYFESLKTLLISSCRKID 327
Query: 324 GNPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLA 383
+PG + LG CPALE L L++C L DK G A+F VC +V +QDCWGLD+ SLA
Sbjct: 328 SSPGPGKLLGSCPALESLQLRRCCLNDKEGMRALFKVCDGVTKVNIQDCWGLDDDSFSLA 387
Query: 384 IICRRVELCYLEGCSLLTTEGLELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLK 443
RRV LEGCS+LTT GLE VI W+EL+ +RVVSCKNIKDS+IS L++LF+ LK
Sbjct: 388 KAFRRVRFLSLEGCSILTTSGLESVILHWEELESMRVVSCKNIKDSEISAALSSLFSLLK 447
Query: 444 ELRWRPDTKHLLSSSLEEISMGKKGGKFFR 473
EL WRPDT+ LSSSLE +GK+G KFF+
Sbjct: 448 ELTWRPDTRSHLSSSLEGTGIGKRGSKFFK 477
>AT5G51370.2 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20874192 FORWARD LENGTH=446
Length = 446
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/389 (55%), Positives = 275/389 (70%), Gaps = 5/389 (1%)
Query: 88 VCKRWLNLHGRLVRSLKILDWNFVSSGRLTHRFPNLTHVDLVPACFHSPRNAAAAVFLSH 147
VCKRWLNL G+ +RSLK+LD++F+ S RLT RFPNLTHVDLV AC + PR + + H
Sbjct: 55 VCKRWLNLQGQRLRSLKLLDFDFLLSERLTTRFPNLTHVDLVNACMN-PR-VNSGILFCH 112
Query: 148 RVASMRVAP---GWCFGEDNILPAEVIDGGLRVIANGCPNLRKLEVVGASEAGLACVGEE 204
+ S ++ W F E+N+L ++VID GLR+++ +L L+V+ ASE GL + +
Sbjct: 113 KSISFHLSSDSSNWEFLEENLLHSDVIDRGLRILSRESFDLLNLKVINASELGLLSLAGD 172
Query: 205 CSTLQELELQRCDDEVLRGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVK 264
CS LQELEL +C+D +L G+ CKNL+ LR++ IGLT LAQGC+ LVK
Sbjct: 173 CSDLQELELHKCNDNLLHGIAACKNLKGLRLVGSVDGLYSSSVSDIGLTFLAQGCRSLVK 232
Query: 265 LELSGCEGSFDGIKAIGQCCVMLEELTVVDHRMDGGWLAGLSFCENLKTLRFQSCKAIDG 324
LELSGCEGSFDGIKAIGQCC +LEEL++ DHRMD GW+A LS+ E+LK LR SC+ ID
Sbjct: 233 LELSGCEGSFDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYFESLKILRISSCRKIDA 292
Query: 325 NPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAI 384
+PG E+ L CPA+E L L++C L DK G A+F VC A EV +QDCWGL + SLA
Sbjct: 293 SPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDDCFSLAK 352
Query: 385 ICRRVELCYLEGCSLLTTEGLELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLKE 444
RRV LEGCS+LT+ GLE VI W+EL+ +RVVSCK+IKDS+ISP L++LF+ LKE
Sbjct: 353 AFRRVRFLSLEGCSVLTSGGLESVILHWEELESMRVVSCKSIKDSEISPALSSLFSLLKE 412
Query: 445 LRWRPDTKHLLSSSLEEISMGKKGGKFFR 473
L WRPDT+ LSSSLE +G +G KFF+
Sbjct: 413 LTWRPDTRSHLSSSLEGAGIGIRGSKFFK 441
>AT5G51370.1 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20873850 FORWARD LENGTH=355
Length = 355
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/299 (53%), Positives = 207/299 (69%), Gaps = 5/299 (1%)
Query: 88 VCKRWLNLHGRLVRSLKILDWNFVSSGRLTHRFPNLTHVDLVPACFHSPRNAAAAVFLSH 147
VCKRWLNL G+ +RSLK+LD++F+ S RLT RFPNLTHVDLV AC + PR + + H
Sbjct: 55 VCKRWLNLQGQRLRSLKLLDFDFLLSERLTTRFPNLTHVDLVNACMN-PR-VNSGILFCH 112
Query: 148 RVASMRVAP---GWCFGEDNILPAEVIDGGLRVIANGCPNLRKLEVVGASEAGLACVGEE 204
+ S ++ W F E+N+L ++VID GLR+++ +L L+V+ ASE GL + +
Sbjct: 113 KSISFHLSSDSSNWEFLEENLLHSDVIDRGLRILSRESFDLLNLKVINASELGLLSLAGD 172
Query: 205 CSTLQELELQRCDDEVLRGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVK 264
CS LQELEL +C+D +L G+ CKNL+ LR++ IGLT LAQGC+ LVK
Sbjct: 173 CSDLQELELHKCNDNLLHGIAACKNLKGLRLVGSVDGLYSSSVSDIGLTFLAQGCRSLVK 232
Query: 265 LELSGCEGSFDGIKAIGQCCVMLEELTVVDHRMDGGWLAGLSFCENLKTLRFQSCKAIDG 324
LELSGCEGSFDGIKAIGQCC +LEEL++ DHRMD GW+A LS+ E+LK LR SC+ ID
Sbjct: 233 LELSGCEGSFDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYFESLKILRISSCRKIDA 292
Query: 325 NPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLA 383
+PG E+ L CPA+E L L++C L DK G A+F VC A EV +QDCWGL + SLA
Sbjct: 293 SPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDDCFSLA 351
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 157/363 (43%), Gaps = 30/363 (8%)
Query: 88 VCKRWLNLHGRLVRSLKILDWNFVSS---GRLTHRFPNLT--HVD------LVPACFHSP 136
VCKRWL+L R R+ + +F L+ RF +T HVD L
Sbjct: 35 VCKRWLSLE-RFSRTTLRIGASFSPDDFISLLSRRFLYITSIHVDERISVSLPSLSPSPK 93
Query: 137 RNAAAAVFLSHRVASMRVAPGWCFGEDNILPAEVIDGGLRVIANGCPNLRKLEVV---GA 193
R ++ G +N+ + + D GL +ANG P + L ++
Sbjct: 94 RKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTGLTALANGFPRIENLSLIWCPNV 153
Query: 194 SEAGLACVGEECSTLQELELQRC--DDEVLRGVG-VCKNLQVLRVIXXXXXXXXXXXXXI 250
S GL + ++C++L+ L+LQ C D+ L VG CK L+ L + +
Sbjct: 154 SSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNL------RFCEGLTDV 207
Query: 251 GLTILAQGC-KRLVKLELSGCEGSFD-GIKAIGQCCVMLEELTV-VDHRMDGGWLAGLSF 307
G+ L GC K L + ++ D ++A+G C +LE L + ++ D G +A
Sbjct: 208 GVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQG 267
Query: 308 CENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREV 367
C LK L+ Q D L C +LERL L Q G A+ + +++
Sbjct: 268 CHRLKNLKLQCVSVTDVAFAAVGEL--CTSLERLALYSFQHFTDKGMRAIGKGSKKLKDL 325
Query: 368 ILQDCWGLD-NSVLSLAIICRRVELCYLEGCSLLTTEGLELVIDSWKELQCLRVVSCKNI 426
L DC+ + + ++A C+ +E + GC + T G+E + S L+ L ++ C+ I
Sbjct: 326 TLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRI 385
Query: 427 KDS 429
+S
Sbjct: 386 GNS 388
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 24/343 (6%)
Query: 97 GRLVRSLKILDWNFVSSGRLTHRFPNLTHVDLVPACFHSPRNAAAAVFLSHRVASMRVAP 156
G+ + L+ L+ F ++ +DLV C S ++ A S+
Sbjct: 187 GKFCKQLEELNLRFCEG------LTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVG 240
Query: 157 GWC-FGEDNILPAEVI-DGGLRVIANGCPNLR--KLEVVGASEAGLACVGEECSTLQELE 212
C E L +E I D GL +A GC L+ KL+ V ++ A VGE C++L+ L
Sbjct: 241 SHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLA 300
Query: 213 L---QRCDDEVLRGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVKLELSG 269
L Q D+ +R +G K + L+ + GL +A GCK L ++E++G
Sbjct: 301 LYSFQHFTDKGMRAIG--KGSKKLKDLTLSDCYFVSCK---GLEAIAHGCKELERVEING 355
Query: 270 CEG-SFDGIKAIGQCCVMLEELTVVD-HRMDGGWLAGL-SFCENLKTLRFQSCKAIDGNP 326
C GI+AIG+ C L+EL ++ R+ L + C++L+ L C I G+
Sbjct: 356 CHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGI-GDI 414
Query: 327 GMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDN-SVLSLAII 385
M C L++LH+++C G ++ C++ E+ L+ C + N +++++
Sbjct: 415 AMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKG 474
Query: 386 CRRVELCYLEGCSLLTTEGLELVIDSWKELQCLRVVSCKNIKD 428
C +L + GC+ ++ G+ + +L L + +NI D
Sbjct: 475 CSLQQL-NVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGD 516
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 19/254 (7%)
Query: 174 GLRVIANGCPNLRKLEVVGASEAG---LACVGEECSTLQELEL---QRCDDEVLRGVGV- 226
GL IA+GC L ++E+ G G + +G+ C L+EL L QR + L+ +G
Sbjct: 337 GLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKG 396
Query: 227 CKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVKLELSGC-EGSFDGIKAIGQCCV 285
CK+L++L ++ I + +A+GC+ L KL + C E GI +IG+ C
Sbjct: 397 CKSLEILHLVDCSGIGD------IAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCK 450
Query: 286 MLEELTV--VDHRMDGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHL 343
L EL++ D + +A C +L+ L C I + G+ CP L L +
Sbjct: 451 SLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQIS-DAGITAIARGCPQLTHLDI 508
Query: 344 QKCQLRDKNGTGAVFSVCRAAREVILQDCWGL-DNSVLSLAIICRRVELCYLEGCSLLTT 402
Q + C ++++L C + DN + L C+ +E C++ C +T+
Sbjct: 509 SVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITS 568
Query: 403 EGLELVIDSWKELQ 416
G+ V+ S ++
Sbjct: 569 AGVATVVSSCPHIK 582
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 139/354 (39%), Gaps = 89/354 (25%)
Query: 88 VCKRWLNLHGRLVRSLKILDWNFVSSGRLTHRFPNLTHVDLVPACFHSPRNAAAAVFLSH 147
VCKRWLNL + L + RL RF + +DL +
Sbjct: 34 VCKRWLNLQSTDRKKLAARAGPHMLR-RLASRFTQIVELDLSQS---------------- 76
Query: 148 RVASMRVAPGWCFGEDNILPAEVIDGGLRVIANGCPNLRKLEV---VGASEAGLACVGEE 204
S PG V D L VI+ G LR L + G ++ GLA +G
Sbjct: 77 --ISRSFYPG------------VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRC 122
Query: 205 CSTLQELELQRCDDEVLRGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVK 264
S LQ L+ V C+ L GL+ +A+GC L
Sbjct: 123 LSLLQFLD-----------VSYCRKLS-----------------DKGLSAVAEGCHDLRA 154
Query: 265 LELSGCEGSFDGIKAIGQCCVMLEELTVVDHRMDGGWLAGLSFCENLKTLRFQSCKAIDG 324
L L+GC D E L + R C +L+ L Q C I
Sbjct: 155 LHLAGCRFITD------------ESLKSLSER-----------CRDLEALGLQGCTNI-T 190
Query: 325 NPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREVI-LQDCWGLDN-SVLSL 382
+ G+ + + C ++ L + KC G +V C ++ + + L DC+ + N S+ SL
Sbjct: 191 DSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSL 250
Query: 383 AIICRRVELCYLEGCSLLTTEGLELVIDSWKE-LQCLRVVSCKNIKDSDISPTL 435
A C+ +E + GC ++ E + L+ DS K+ L+ LR+ C NI DS +S L
Sbjct: 251 AQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCIL 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 311 LKTLRFQSCKAIDGNPGMEEHLGFCPAL-ERLHLQKCQLRDKNGTGAVFSVCRAAREVIL 369
L+ L +CK I + G+ +G C +L + L + C+ G AV C R + L
Sbjct: 100 LRVLNLHNCKGI-TDTGLAS-IGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHL 157
Query: 370 QDC-WGLDNSVLSLAIICRRVELCYLEGCSLLTTEGLELVIDSWKELQCLRVVSCKNIKD 428
C + D S+ SL+ CR +E L+GC+ +T GL ++ ++++ L + C N+ D
Sbjct: 158 AGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGD 217
Query: 429 SDISPTLATLFATLKELR 446
+ +S ++LK L+
Sbjct: 218 AGVSSVAKACASSLKTLK 235
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 124/321 (38%), Gaps = 51/321 (15%)
Query: 88 VCKRWLNL--------------------HGRLVRSL---KILDWNFVSSGRLTHRFPNLT 124
V K WLNL G L RSL K D + T L
Sbjct: 82 VSKHWLNLLSSISRSEVNESSVQDVEEGEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLG 141
Query: 125 HVDLVPACFHSPRNAAAAVFLSHRVASMRVAPGWCFGEDNILPAEVIDGGLRVIANGCPN 184
+ + + F S ++H S+R+ W LPA V D GL IA CP
Sbjct: 142 KLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLW------NLPA-VSDLGLSEIARSCPM 194
Query: 185 LRKLEVV---GASEAGLACVGEECSTLQELELQRCD---DEVLRGVG-VCKNLQVLRVIX 237
+ KL++ G +++GL + E C L +L + C +E LR + C NL+ + +
Sbjct: 195 IEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRS 254
Query: 238 XXXXXXXXXXXXIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGQCCVMLEELTVVDHRM 297
+LAQ L K++L S + IG + +L + H +
Sbjct: 255 CPRIGDQGVAF-----LLAQAGSYLTKVKLQMLNVSGLSLAVIGHYGAAVTDLVL--HGL 307
Query: 298 D-----GGWLAG-LSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQKCQLRDK 351
G W+ G + LK+L SC+ + + G+E CP L+ + L KC L
Sbjct: 308 QGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMT-DVGLEAVGNGCPDLKHVSLNKCLLVSG 366
Query: 352 NGTGAVFSVCRAAREVILQDC 372
G A+ + + L++C
Sbjct: 367 KGLVALAKSALSLESLKLEEC 387
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 210 ELELQRCDDEVLRGVGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVKLELSG 269
LE + D L + C +L+ L ++ GL +A+ CKRL KL + G
Sbjct: 265 HLERMQVSDVALSAISYCSSLESLHLVKTPECTN------FGLAAIAEKCKRLRKLHIDG 318
Query: 270 CEGSF---DGIKAIGQCCVMLEELTVV---DHRMDGGWLAGLSFCENLKTLRFQSCKAID 323
+ + +G+ A+ + C L+EL ++ + G LA + C NL+ L C
Sbjct: 319 WKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLA--AKCLNLERLALCGCDTF- 375
Query: 324 GNPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGL 375
G+P + CPAL +L ++ C + D G + + C +V ++ C G+
Sbjct: 376 GDPELSCIAAKCPALRKLCIKNCPISDV-GIENLANGCPGLTKVKIKKCKGV 426
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 170 VIDGGLRVIANGCPNLRKLEVVG---ASEAGLACVGEECSTLQELELQRC---DDEVLRG 223
V D + +A C NL L++ +E GL +G +QEL+L C +D L
Sbjct: 364 VTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEY 423
Query: 224 VGVCKNLQVLRVIXXXXXXXXXXXXXIGLTILAQGCKRLVKLELSGCEG-SFDGIKAIGQ 282
+ C NLQ L++ G+ + C +L++L+L C G DG+ A+ +
Sbjct: 424 ISKCSNLQRLKL------GLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSR 477
Query: 283 CCVMLEELTVVD--HRMDGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALER 340
C L L + D G + + E L L + K I G G+ C L
Sbjct: 478 GCKSLNRLILSYCCELTDTG-VEQIRQLELLSHLELRGLKNITG-VGLAAIASGCKKLGY 535
Query: 341 LHLQKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICRRVELCYLEGCSLL 400
L ++ C+ D +G A+ + R++ L +C D ++ L RV+ L S +
Sbjct: 536 LDVKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLSRV 595
Query: 401 TTEGLELVI 409
T EG E +
Sbjct: 596 TVEGFEFAL 604