Miyakogusa Predicted Gene

Lj0g3v0193529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0193529.1 Non Chatacterized Hit- tr|E1ZQM8|E1ZQM8_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,34.27,8e-19,Galactose-binding domain-like,Galactose-binding
domain-like; no description,NULL; seg,NULL; SUBFAMIL,CUFF.12245.1
         (263 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72990.1 | Symbols: BGAL17 | beta-galactosidase 17 | chr1:274...   183   9e-47
AT1G72990.2 | Symbols: BGAL17 | beta-galactosidase 17 | chr1:274...   183   1e-46

>AT1G72990.1 | Symbols: BGAL17 | beta-galactosidase 17 |
           chr1:27457480-27462168 REVERSE LENGTH=697
          Length = 697

 Score =  183 bits (465), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 87/166 (52%), Positives = 118/166 (71%), Gaps = 9/166 (5%)

Query: 98  YLFLFMGILSSVYLDGEIVQGWKMFPVPLHNLNEVPSYNPIIQSSYSALKEISASRKRLI 157
           Y+F   GILSSVYLDG+I+ GWKM P+P HNLN+ P+    +Q + +  K+   +     
Sbjct: 537 YIFDDKGILSSVYLDGQILHGWKMIPIPFHNLNQEPNLTFEMQHTKNRSKKFELT----- 591

Query: 158 YKSENTSREPAFYSGRFFIDKSSQVKDTFISFNNWGKGIAFVNDFNIGRYWPVRGPQCNL 217
             ++   +EPA ++G F I+   ++KDT++SFN WGKG+AFVN+FNIGRYWP  GPQCNL
Sbjct: 592 --NDVGRKEPALFAGEFSINSEEEIKDTYLSFNGWGKGVAFVNEFNIGRYWPSVGPQCNL 649

Query: 218 YVPAPILKQGDNFLVILELESPDPKLVVQTVDEPNFTCGS--SEVN 261
           YVPAP+LK+G N LV+ ELESP  +L ++ VD  +FTCGS  S+VN
Sbjct: 650 YVPAPLLKRGKNTLVVFELESPHLELSLEAVDHQDFTCGSNVSKVN 695


>AT1G72990.2 | Symbols: BGAL17 | beta-galactosidase 17 |
           chr1:27457480-27461867 REVERSE LENGTH=635
          Length = 635

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/166 (52%), Positives = 118/166 (71%), Gaps = 9/166 (5%)

Query: 98  YLFLFMGILSSVYLDGEIVQGWKMFPVPLHNLNEVPSYNPIIQSSYSALKEISASRKRLI 157
           Y+F   GILSSVYLDG+I+ GWKM P+P HNLN+ P+    +Q + +  K+   +     
Sbjct: 475 YIFDDKGILSSVYLDGQILHGWKMIPIPFHNLNQEPNLTFEMQHTKNRSKKFELT----- 529

Query: 158 YKSENTSREPAFYSGRFFIDKSSQVKDTFISFNNWGKGIAFVNDFNIGRYWPVRGPQCNL 217
             ++   +EPA ++G F I+   ++KDT++SFN WGKG+AFVN+FNIGRYWP  GPQCNL
Sbjct: 530 --NDVGRKEPALFAGEFSINSEEEIKDTYLSFNGWGKGVAFVNEFNIGRYWPSVGPQCNL 587

Query: 218 YVPAPILKQGDNFLVILELESPDPKLVVQTVDEPNFTCGS--SEVN 261
           YVPAP+LK+G N LV+ ELESP  +L ++ VD  +FTCGS  S+VN
Sbjct: 588 YVPAPLLKRGKNTLVVFELESPHLELSLEAVDHQDFTCGSNVSKVN 633