Miyakogusa Predicted Gene

Lj0g3v0192269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0192269.1 Non Chatacterized Hit- tr|D8UJ57|D8UJ57_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,23.01,0.000000000002, ,CUFF.12162.1
         (430 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12380.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   518   e-147
AT1G62870.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   518   e-147

>AT1G12380.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins
           in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25;
           Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes -
           6 (source: NCBI BLink). | chr1:4214499-4216880 REVERSE
           LENGTH=793
          Length = 793

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/425 (59%), Positives = 323/425 (76%), Gaps = 23/425 (5%)

Query: 17  VDPTRFGSG-LLLQQP----HLMLSGGKDDLGALAMLEDSVKKLKSPKTSPGFALSKSQV 71
           VDP+RF  G L    P    HLMLSGGKDDLG LAMLEDSVKKLKSPK S   +L++SQ+
Sbjct: 174 VDPSRFCGGELHYSTPPPPQHLMLSGGKDDLGPLAMLEDSVKKLKSPKPSQTQSLTRSQI 233

Query: 72  DSALDHLADWVYESCGSVSFSSLEHPKFRAFLTQVGLPPVIPREFTGTRLDAKFEEVKAE 131
           +SALD L+DWV+ESCGSVS S LEHPKFRAFLTQVGLP +  R+F  TRLD K EE +AE
Sbjct: 234 ESALDSLSDWVFESCGSVSLSGLEHPKFRAFLTQVGLPIISKRDFATTRLDLKHEEARAE 293

Query: 132 SEARIRDAMFFQLGSGGWKVNNYGDDDNLVNFTVNLPNGTSLYRRALFVTGSAPSNYAEE 191
           +E+RIRDAMFFQ+ S GWK    G+  +LVN  VNLPNGTSLYRRA+ V G+ PSNYAEE
Sbjct: 294 AESRIRDAMFFQISSDGWKPGESGE--SLVNLIVNLPNGTSLYRRAVLVNGAVPSNYAEE 351

Query: 192 ILLETITGICGNLVQQCVGIVADRFKSKALRNLENQNHWMVNLSCQYQGFNSLIKDFTKE 251
           +LLET+ GICGN  Q+CVGIV+D+FK+KALRNLE+Q+ WMVNLSCQ+QG NSLIKDF KE
Sbjct: 352 VLLETVKGICGNSPQRCVGIVSDKFKTKALRNLESQHQWMVNLSCQFQGLNSLIKDFVKE 411

Query: 252 LPLFRTVAENCLKLASFVNYNSQIRSSFHKYQLQEYGHTWLLRVPTREFEDFN------- 304
           LPLF++V++NC++LA F+N  +QIR++  KYQLQE+G + +LR+P   + D         
Sbjct: 412 LPLFKSVSQNCVRLAKFINNTAQIRNAHCKYQLQEHGESIMLRLPLHCYYDDERRSCSSS 471

Query: 305 ---------FGPVFTMMEDTLRSGRALQLVLLDESFNIASMEDPNAGEVGDMVRNVGFWN 355
                    + P+F ++ED L S RA+QLV+ D++  +  MED  A EV +MV + GFWN
Sbjct: 472 SSGSNKVCFYEPLFNLLEDVLSSARAIQLVVHDDACKVVLMEDHMAREVREMVGDEGFWN 531

Query: 356 DLEAVHALVKLVKDMAHEIETERPLVGQCLIIWNELRSKVKDWCSKFQIAEGAVDKLIEK 415
           ++EAVHAL+KLVK+MA  IE E+ LVGQCL +W+ELR+KVKDW SKF + EG V+K++E+
Sbjct: 532 EVEAVHALIKLVKEMARRIEEEKLLVGQCLPLWDELRAKVKDWDSKFNVGEGHVEKVVER 591

Query: 416 SSRRT 420
             +++
Sbjct: 592 RFKKS 596


>AT1G62870.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G12380.1); Has 351 Blast hits to 343 proteins
           in 42 species: Archae - 2; Bacteria - 0; Metazoa - 27;
           Fungi - 5; Plants - 299; Viruses - 0; Other Eukaryotes -
           18 (source: NCBI BLink). | chr1:23284220-23286508
           REVERSE LENGTH=762
          Length = 762

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/406 (62%), Positives = 319/406 (78%), Gaps = 7/406 (1%)

Query: 17  VDPTRF-GSGLLLQQPHLMLSGGKDDLGALAMLEDSVKKLKSPKTSPGFALSKSQVDSAL 75
           VDP+RF G   + QQPHLMLSGGKDDLG LAMLEDSVKKLKSPKTS    L+K+Q+DSAL
Sbjct: 165 VDPSRFCGQFPVTQQPHLMLSGGKDDLGPLAMLEDSVKKLKSPKTSQTRNLTKAQIDSAL 224

Query: 76  DHLADWVYESCGSVSFSSLEHPKFRAFLTQVGLPPVIPREFTGTRLDAKFEEVKAESEAR 135
           D L+DWV+ESCGSVS S LEHPK RAFLTQVGLP +  R+F   RLD K+E+ +AE+E+R
Sbjct: 225 DSLSDWVFESCGSVSLSGLEHPKLRAFLTQVGLPIISRRDFVTGRLDLKYEDSRAEAESR 284

Query: 136 IRDAMFFQLGSGGWKVNNYGDDDNLVNFTVNLPNGTSLYRRALFVTGSAPSNYAEEILLE 195
           I DAMFFQ+ S GWK ++ G+  NLVN  VNLPNGTSLYRRA+FV G+ PSNYAEE+L E
Sbjct: 285 IHDAMFFQIASDGWKFDSSGE--NLVNLIVNLPNGTSLYRRAVFVNGAVPSNYAEEVLWE 342

Query: 196 TITGICGNLVQQCVGIVADRFKSKALRNLENQNHWMVNLSCQYQGFNSLIKDFTKELPLF 255
           T+ GICGN  Q+CVGIV+DRF SKALRNLE+Q+ WMVNLSCQ+QGFNSLI+DF KELPLF
Sbjct: 343 TVRGICGNSPQRCVGIVSDRFMSKALRNLESQHQWMVNLSCQFQGFNSLIRDFVKELPLF 402

Query: 256 RTVAENCLKLASFVNYNSQIRSSFHKYQLQEYGHTWLLRVPTREFEDFNFGPVFTMMEDT 315
           ++V+++C +L +FVN  +QIR++  KYQLQE G T +L +P    +   F P++ ++ED 
Sbjct: 403 KSVSQSCSRLVNFVNSTAQIRNAVCKYQLQEQGETRMLHLP---LDSSLFEPLYNLLEDV 459

Query: 316 LRSGRALQLVLLDESFNIASMEDPNAGEVGDMVRNVGFWNDLEAVHALVKLVKDMAHEIE 375
           L   RA+QLV+ D+      MED  A EVG+MV +VGFWN++EAV+ L+KLVK+MA  IE
Sbjct: 460 LSFARAIQLVMHDDVCKAVLMEDHMAREVGEMVGDVGFWNEVEAVYLLLKLVKEMARRIE 519

Query: 376 TERPLVGQCLIIWNELRSKVKDWCSKFQIAEG-AVDKLIEKSSRRT 420
            ERPLVGQCL +W+ELRSK+KDW +KF + E   V+K++E+  +++
Sbjct: 520 EERPLVGQCLPLWDELRSKIKDWYAKFNVVEERQVEKIVERRFKKS 565