Miyakogusa Predicted Gene

Lj0g3v0190879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190879.1 Non Chatacterized Hit- tr|G7IF09|G7IF09_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,59.47,0,seg,NULL,CUFF.13311.1
         (1365 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13590.1 | Symbols:  | unknown protein; Has 150 Blast hits to...    80   7e-15

>AT5G13590.1 | Symbols:  | unknown protein; Has 150 Blast hits to 121
            proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa
            - 80; Fungi - 5; Plants - 17; Viruses - 0; Other
            Eukaryotes - 40 (source: NCBI BLink). |
            chr5:4374718-4378647 REVERSE LENGTH=1168
          Length = 1168

 Score = 80.5 bits (197), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 183/468 (39%), Gaps = 93/468 (19%)

Query: 800  FSEETELPFDQPNIGSHGVDVVQCAEEVIKTTDTVLENDINFPKTEGSANTDDDSARDFN 859
            ++ ETE    Q   G+ GV  V    E  +  D      +   K E S   D+DS  + +
Sbjct: 662  YTGETEGRIVQDGEGTSGVSTVSGGIENPEIVDNSSPVSL---KAEMST-IDNDSPMECS 717

Query: 860  NGGNQGRIIDLXXXXXXXXXXKTRPIPGRSLSSRPGRDVLPDTLDGEKFH---------- 909
            +G +Q RII+L               P ++L +      +P  ++ ++FH          
Sbjct: 718  DG-SQSRIINLTQVKS----------PVKALDA--SGSFVPPRMERDRFHDFPLEPREYT 764

Query: 910  -RGRDEVYVDSPHKFSRERHQDMSGRNSRMNFVRGRGRMNSRMDSHRGEWDSDREYSGEF 968
             RG DE       KFSRER+     R+ R+NF+  R R+    +S+  + D+ +    EF
Sbjct: 765  FRGSDESC-----KFSRERYHGRIMRSPRLNFIPDRRRLPDNTESNLHDQDTKK---FEF 816

Query: 969  YNGPTQYRGPRPKYASAMADTDMEYNNAPDGSYASNARLGRKPLNDGSYIAPR-----RR 1023
             N     RG                     G++ SN + GR+P NDG  + P      RR
Sbjct: 817  DNHGNTRRG---------------------GAFMSNFQRGRRPANDG--VTPYAHSFPRR 853

Query: 1024 SPGGRDGIQMGHRNPRPISPNR--CMGGDGSELVGVRHNEKFMRGYPDDTMDPVYSRPQQ 1081
            SP                S NR      D S   G R  EKF RG   +  +P++   Q+
Sbjct: 854  SPS--------------FSYNRGPTNKEDTSAFHGFRDGEKFTRGLQCNNTEPLFMNHQR 899

Query: 1082 FEAMEXXXXXXXXXXXXMQRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGFGNH 1141
                               +R                                 E F  H
Sbjct: 900  PYRGRSGFARGRTKFVNNPKR----DFPGFRSRSPVRSRERSDGSSSSFRNRSQEEFSGH 955

Query: 1142 PDCSHRRSPM-YRVDRMRSP--PVFSGERVVRRHDSPSFMSRPSNDMRDIDSARDHGHPR 1198
             D SHRRSP  Y+V+RM SP    +S E VVRRH+SP F  RPSN  R    AR  G+ R
Sbjct: 956  TDFSHRRSPSGYKVERMSSPDHSGYSREMVVRRHNSPPFSHRPSNAGRGRGYARGRGYVR 1015

Query: 1199 P------GISNRSPSGRILIRNNRRFDVVDHRDRADNDTDYFGGPMHS 1240
                   G S R PS  ++ RN+   + +D R+R D   D+F G +HS
Sbjct: 1016 GRGYGRDGNSFRKPSDHVVHRNHGNMNNLDPRERVDYSDDFFEGQIHS 1063