Miyakogusa Predicted Gene
- Lj0g3v0190499.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0190499.1 Non Chatacterized Hit- tr|I1N0S6|I1N0S6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.26,0,seg,NULL;
DEAD_ATP_HELICASE,RNA helicase, ATP-dependent, DEAD-box, conserved
site; DEAD,DNA/RNA heli,CUFF.12083.1
(609 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 738 0.0
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 248 1e-65
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 244 1e-64
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 213 3e-55
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 210 2e-54
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 204 2e-52
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 203 3e-52
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 202 7e-52
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 202 7e-52
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 202 7e-52
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 202 8e-52
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 201 2e-51
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 200 2e-51
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 200 2e-51
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 200 2e-51
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 200 3e-51
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 200 3e-51
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 199 7e-51
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 198 8e-51
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 197 1e-50
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 2e-50
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 4e-50
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 5e-50
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 5e-50
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 196 5e-50
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 196 6e-50
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 195 1e-49
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 191 1e-48
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 191 1e-48
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 191 1e-48
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 189 4e-48
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 188 8e-48
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 188 1e-47
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 185 7e-47
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 182 4e-46
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 181 1e-45
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 181 1e-45
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 181 2e-45
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 179 7e-45
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 1e-44
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 177 1e-44
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 2e-44
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 2e-44
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 177 2e-44
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 177 2e-44
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 177 2e-44
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 176 6e-44
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 175 1e-43
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 174 2e-43
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 173 3e-43
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 173 3e-43
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 173 3e-43
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 172 9e-43
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 171 2e-42
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 170 3e-42
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 169 5e-42
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 166 4e-41
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 163 4e-40
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 162 7e-40
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 161 1e-39
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 160 2e-39
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 160 2e-39
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 159 5e-39
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 4e-38
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 155 1e-37
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 152 4e-37
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 150 2e-36
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 150 3e-36
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 147 2e-35
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 147 3e-35
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 143 3e-34
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 134 2e-31
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 134 2e-31
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 131 2e-30
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 130 2e-30
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 112 6e-25
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 100 3e-21
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 69 1e-11
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 60 6e-09
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/587 (63%), Positives = 430/587 (73%), Gaps = 17/587 (2%)
Query: 36 AQSPWNFAKYTESVAEEYARRNTTSIDHKISNALLKHHR-------------RXXXXXXX 82
AQSPW+FA Y+ SV EE+ARR+TTSID KIS A+ HR
Sbjct: 69 AQSPWDFASYSSSVGEEHARRHTTSIDEKISKAI--QHRPVPISINEEEEEEEEEEDASD 126
Query: 83 XXXXHQEDYRPXXXXXXXXXXXXXXXKSFFSPSDGISFHADSFLHLNLSRPLLRACQALG 142
QE+Y K FFS DG+SFHAD+F+ LNLSRPLLRAC+ LG
Sbjct: 127 AETDKQEEYLSEDDEAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLG 186
Query: 143 YIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLLFRPKQMRAISALCLTP 202
Y PTPIQAACIPLAL+GRD+CASAITGSGKTAAFALP LERLLFRPK++ A L LTP
Sbjct: 187 YKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTP 246
Query: 203 TRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNS 262
TRELAVQ+HSM+++LAQFTDI+C LIVGGLS + QE LRSMP++VVATPGRMIDHLRNS
Sbjct: 247 TRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNS 306
Query: 263 MXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSL 322
M EADRLL+ GF EI ELVR+CPK+RQTMLFSATMTEEV EL+KLSL
Sbjct: 307 MSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSL 366
Query: 323 SKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSKTFTSKVIIFSGTKQAAH 382
+KPLRLSADPSA+RP LT N EAVLL++C++TF SKVIIFSGTKQAAH
Sbjct: 367 NKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAH 426
Query: 383 RLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVIN 442
RLKI+FGLA LKAAELHGNLTQAQRL++LE FRKQ+VDFL+ATDVAARGLDI+GVQTVIN
Sbjct: 427 RLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVIN 486
Query: 443 FACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAKRAGSKLKSRTVAEQSIH 502
+ACPR++ SYVHRVGRTARAGREG AVTFVTD+DRSLLK IAK+ GSKLKSR + EQSI
Sbjct: 487 YACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIV 546
Query: 503 KWSQIIDQMEGQIDEVLQEEREEIALRXXXXXXXXXXXXXXHREEIFSRPKRTWFVTEKG 562
KWSQIID+ME Q V+ ER+E ALR HR+EI++RPKRTWF+TEK
Sbjct: 547 KWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTWFMTEKE 606
Query: 563 KRLVAKAAKDSMDKDNSSRKEVLSAEQAXXXXXXXXXXXXXXXNLPR 609
K+LVA+A KDS N + E++SA++A NLPR
Sbjct: 607 KKLVAQAEKDSA--GNPAGGELVSADRAEDLKMKEKRKREREKNLPR 651
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 206/373 (55%), Gaps = 5/373 (1%)
Query: 122 ADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPI 181
A +F L L+ + C+ LG PTP+Q C+P L+GRD+ A TGSGKTAAFALPI
Sbjct: 57 ATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPI 116
Query: 182 LERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
L RL P + AL +TPTRELA Q+ ++L ++RC +IVGG+ Q +L
Sbjct: 117 LHRLAEDP---YGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSL 173
Query: 242 RSMPNVVVATPGRMIDHLRNS--MXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPK 299
S P++V+ TPGR+ L N+ + EADR+L++GF E++ + + PK
Sbjct: 174 VSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK 233
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVL 359
RQT+LFSATMT + L++ S +K A K +LT +
Sbjct: 234 SRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHI 293
Query: 360 LAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQV 419
L+ +IF T + RL ++ E++ +H +Q+ RL AL +F+ +V
Sbjct: 294 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 353
Query: 420 DFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSL 479
L+ATDVA+RGLDI V VIN+ PRD YVHRVGRTARAGR G AV+ +T+ D L
Sbjct: 354 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 413
Query: 480 LKAIAKRAGSKLK 492
+ I + G K++
Sbjct: 414 IHKIEEEVGKKME 426
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 209/387 (54%), Gaps = 12/387 (3%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F L + L++AC+ LG+ +P+ IQA +P AL G+D+ A TGSGKT AFA+PIL+
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 184 RLL-----FRPKQMR----AISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLST 234
LL PK+ R A A L+PTRELA+Q+ E+L +RC ++VGG+
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 235 KVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELV 294
Q AL P+V+VATPGR+ DH+ ++ EADRLL F + +++
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 295 RMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXN 354
P +R+T LFSATMT++V +L + L P+++ A A + +++
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEA---ASKYSTVDTLKQQYRFVAAKY 246
Query: 355 PEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQF 414
+ L+ + S+ S +IF+ T L ++ +A + G +TQ++RL AL +F
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 306
Query: 415 RKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD 474
+ + + LV TDVA+RGLDI V VIN+ P + Y+HRVGRTARAGR G ++ V
Sbjct: 307 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 366
Query: 475 NDRSLLKAIAKRAGSKLKSRTVAEQSI 501
+ I K G KL E +
Sbjct: 367 YELEWYIQIEKLIGKKLPEYPAEEDEV 393
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 188/357 (52%), Gaps = 12/357 (3%)
Query: 125 FLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILER 184
F LNL + A + GY PTPIQ +PL LSG D+ A A TGSGKTAAF +P+LE+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 185 LLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSM 244
L Q + AL L+PTR+LA Q + L +FTD+R L+VGG S + Q L
Sbjct: 90 LKQHVPQ-GGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKG 148
Query: 245 PNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQTM 304
P+V++ATPGR++ L EAD L +GF ++ +++ + RQT+
Sbjct: 149 PDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTL 208
Query: 305 LFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPE---AVLLA 361
LFSAT+ + E K L +P + D K L PE + LL
Sbjct: 209 LFSATLPSALAEFAKAGLREPQLVRLDVENKISPDL------KLSFLTVRPEEKYSALLY 262
Query: 362 MCSKTFTS--KVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQV 419
+ + +S + +IF TK + +F L ++ + +G++ Q R + +FR ++
Sbjct: 263 LVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKT 322
Query: 420 DFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
L+ TD+AARG+DI + VIN+ P +VHRVGR ARAGR GCA +FVT D
Sbjct: 323 MLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPED 379
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 198/382 (51%), Gaps = 14/382 (3%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F S ++ A + Y PT IQ +P+ LSGRD+ A TGSGKTAAF LP++
Sbjct: 229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIV 288
Query: 184 RLLFRPKQMR---AISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAA 240
++ +P+ R I +C PTRELA Q+ + ++ +R + GG+S Q
Sbjct: 289 HIMDQPELQRDEGPIGVIC-APTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKE 347
Query: 241 LRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKK 300
L++ +VVATPGR+ID L+ EADR+ +LGF +++ +V
Sbjct: 348 LKAGCEIVVATPGRLIDMLKMK-ALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPD 406
Query: 301 RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLL 360
RQT+LFSATM +V +L + LS P+R++ +T P +L
Sbjct: 407 RQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLP-WLLE 465
Query: 361 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVD 420
+ V++F+ K ++ L K A LHG+ QA R+E L++F+
Sbjct: 466 KLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHH 525
Query: 421 FLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAG-REGCAVTFVTDNDRSL 479
L+ATDVAARGLDI ++TV+N+ +D+ +VHR+GRT RAG R+G A T VT +
Sbjct: 526 VLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQRE--- 582
Query: 480 LKAIAKRAGSKLKSRTVAEQSI 501
A+ AG + S A Q++
Sbjct: 583 ----ARFAGELVNSLVAAGQNV 600
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 195/389 (50%), Gaps = 22/389 (5%)
Query: 115 SDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKT 174
D + ++F ++L L Q Y+ PTP+Q IP+ +GRD+ A A TGSGKT
Sbjct: 138 GDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKT 197
Query: 175 AAFALPILERLLF-----RPKQMRAIS--ALCLTPTRELAVQVHSMMESLAQFTDIRCCL 227
AAF PI+ ++ RP+ +R + A+ L+PTRELA Q+H + T ++ +
Sbjct: 198 AAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVV 257
Query: 228 IVGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFN 287
GG Q L +++VATPGR+ D L EADR+L++GF
Sbjct: 258 AYGGTPVNQQIRELERGVDILVATPGRLNDLLERG-RVSLQMVRFLALDEADRMLDMGFE 316
Query: 288 AEIQELVRMC----PKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXX 343
+I+++V+ P RQTMLFSAT E+ L LS + L+ + +S
Sbjct: 317 PQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAV---GRVGSSTDLI 373
Query: 344 XXXXXXXXXXNPEAVLLAMC-------SKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAA 396
+ + L+ + ++ + ++F TK+ A L+ + A
Sbjct: 374 VQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPAT 433
Query: 397 ELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRV 456
+HG+ +Q +R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+
Sbjct: 434 TIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 493
Query: 457 GRTARAGREGCAVTFVTDNDRSLLKAIAK 485
GRT RAG G A F DN+ ++ K +A+
Sbjct: 494 GRTGRAGNSGLATAFFNDNNTTMAKPLAE 522
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 189/350 (54%), Gaps = 7/350 (2%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F L+LS A + +G+ + T IQA I L G+D+ +A TGSGKT AF +P +E
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 184 RLL---FRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAA 240
L F P+ + +C PTRELA+Q ++ E L + +++GG + + +
Sbjct: 150 LLFKERFSPRNGTGVIVIC--PTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQR 207
Query: 241 LRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKK 300
+ S N+V+ATPGR++DHL+N+ EADR+LE F ++ +++++ PK
Sbjct: 208 IASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKT 267
Query: 301 RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLL 360
RQT LFSAT T +V +L ++SL+ P+ + D +R + +L+
Sbjct: 268 RQTALFSATQTSKVKDLARVSLTSPVHVDVD-DGRRKVTNEGLEQGYCVVPSKQRLILLI 326
Query: 361 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVD 420
+ K K+++F T ++ I ++++ +++HG + Q +R + F K +
Sbjct: 327 SFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKG 386
Query: 421 FLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARA-GREGCAV 469
L+ TDVAARGLDI V +I + P T Y+HRVGRTAR G +G A+
Sbjct: 387 ILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKAL 436
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 198/379 (52%), Gaps = 20/379 (5%)
Query: 123 DSFLHLNLSRPL---LRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFAL 179
++F ++L L +R C+ Y+ PTP+Q IP+ L+ RD+ A A TGSGKTAAF
Sbjct: 151 NTFADIDLGDALNLNIRRCK---YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 180 PILERLLF-----RPKQMRAIS--ALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGL 232
PI+ ++ RP+ RA+ A+ L+PTRELA Q+H + + T ++ + GG
Sbjct: 208 PIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGT 267
Query: 233 STKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQE 292
Q L +++VATPGR+ D L + EADR+L++GF +I++
Sbjct: 268 PIHQQLRELERGCDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRK 326
Query: 293 LVR---MCPKK-RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXX 348
+V M P+ RQTMLFSAT ++ L +S + L+ +T
Sbjct: 327 IVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQ 386
Query: 349 XXXXXNPEAVLLAMCSKTFT--SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQ 406
+ LL +T S ++F TK+ A L+ + E A +HG+ TQ +
Sbjct: 387 ESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446
Query: 407 RLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREG 466
R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G
Sbjct: 447 REVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 506
Query: 467 CAVTFVTDNDRSLLKAIAK 485
A F +N+ L +++A+
Sbjct: 507 IATAFFNENNAQLARSLAE 525
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 198/379 (52%), Gaps = 20/379 (5%)
Query: 123 DSFLHLNLSRPL---LRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFAL 179
++F ++L L +R C+ Y+ PTP+Q IP+ L+ RD+ A A TGSGKTAAF
Sbjct: 151 NTFADIDLGDALNLNIRRCK---YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 180 PILERLLF-----RPKQMRAIS--ALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGL 232
PI+ ++ RP+ RA+ A+ L+PTRELA Q+H + + T ++ + GG
Sbjct: 208 PIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGT 267
Query: 233 STKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQE 292
Q L +++VATPGR+ D L + EADR+L++GF +I++
Sbjct: 268 PIHQQLRELERGCDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRK 326
Query: 293 LVR---MCPKK-RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXX 348
+V M P+ RQTMLFSAT ++ L +S + L+ +T
Sbjct: 327 IVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQ 386
Query: 349 XXXXXNPEAVLLAMCSKTFT--SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQ 406
+ LL +T S ++F TK+ A L+ + E A +HG+ TQ +
Sbjct: 387 ESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446
Query: 407 RLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREG 466
R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G
Sbjct: 447 REVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 506
Query: 467 CAVTFVTDNDRSLLKAIAK 485
A F +N+ L +++A+
Sbjct: 507 IATAFFNENNAQLARSLAE 525
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 198/379 (52%), Gaps = 20/379 (5%)
Query: 123 DSFLHLNLSRPL---LRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFAL 179
++F ++L L +R C+ Y+ PTP+Q IP+ L+ RD+ A A TGSGKTAAF
Sbjct: 151 NTFADIDLGDALNLNIRRCK---YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 180 PILERLLF-----RPKQMRAIS--ALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGL 232
PI+ ++ RP+ RA+ A+ L+PTRELA Q+H + + T ++ + GG
Sbjct: 208 PIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGT 267
Query: 233 STKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQE 292
Q L +++VATPGR+ D L + EADR+L++GF +I++
Sbjct: 268 PIHQQLRELERGCDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDMGFEPQIRK 326
Query: 293 LVR---MCPKK-RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXX 348
+V M P+ RQTMLFSAT ++ L +S + L+ +T
Sbjct: 327 IVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQ 386
Query: 349 XXXXXNPEAVLLAMCSKTFT--SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQ 406
+ LL +T S ++F TK+ A L+ + E A +HG+ TQ +
Sbjct: 387 ESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQE 446
Query: 407 RLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREG 466
R AL F+ + LVATDVAARGLDI V V+NF P D+ YVHR+GRT RAG+ G
Sbjct: 447 REVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 506
Query: 467 CAVTFVTDNDRSLLKAIAK 485
A F +N+ L +++A+
Sbjct: 507 IATAFFNENNAQLARSLAE 525
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 188/387 (48%), Gaps = 24/387 (6%)
Query: 125 FLH-LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
F H L+ +L + L Y P PIQ +P+ +SGRD A TGSGKT F LP+L
Sbjct: 530 FWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLR 589
Query: 184 RLLFRP--KQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
+ +P + L + PTREL Q+HS + ++ IRC + GG Q + L
Sbjct: 590 HIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 649
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXX--XXXEADRLLELGFNAEIQELVRMCPK 299
+ +VV TPGRMID L S EADR+ ++GF +I +++
Sbjct: 650 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 709
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEA-- 357
+RQT+LFSAT +V L + L+KP+ + + PE+
Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEIQV-------GGRSVVNKDITQLVEVRPESDR 762
Query: 358 ---VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQF 414
+L + + K+++F +++ L + LHG Q R + F
Sbjct: 763 FLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDF 822
Query: 415 RKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD 474
+ + L+AT VAARGLD+ ++ V+NF P YVHRVGRT RAGR+GCAVTF+++
Sbjct: 823 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 882
Query: 475 NDRSLLKAIAKRAGSKLKSRTVAEQSI 501
+D AK A +K+ ++EQ +
Sbjct: 883 DD-------AKYAPDLVKALELSEQPV 902
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 200/392 (51%), Gaps = 28/392 (7%)
Query: 115 SDGISFHADSFLHLNLSRPL---LRACQALGYIHPTPIQAACIPLALSGRDICASAITGS 171
D + ++F ++L L +R C+ Y+ PTP+Q IP+ L GRD+ A A TGS
Sbjct: 151 GDNVPPPVNTFAEIDLGEALNLNIRRCK---YVKPTPVQRHAIPILLEGRDLMACAQTGS 207
Query: 172 GKTAAFALPILERLLF-----RPKQMRAIS--ALCLTPTRELAVQVHSMMESLAQFTDIR 224
GKTAAF PI+ ++ RP+ R + A+ L+PTRELA Q+H + + T ++
Sbjct: 208 GKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVK 267
Query: 225 CCLIVGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLEL 284
+ GG Q L +++VATPGR+ D L + EADR+L++
Sbjct: 268 VVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERA-RVSMQMIRFLALDEADRMLDM 326
Query: 285 GFNAEIQELVR---MCPKK-RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASL 340
GF +I+++V M P+ RQT+LFSAT E+ L L+ + L+ + +S
Sbjct: 327 GFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAV---GRVGSST 383
Query: 341 TXXXXXXXXXXXXNPEAVLLAMCSKTFTSKV-------IIFSGTKQAAHRLKIIFGLAEL 393
+ + L+ + + + ++F TK+ A L+ +
Sbjct: 384 DLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGF 443
Query: 394 KAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYV 453
A +HG+ TQ +R AL+ F+ + LVATDVAARGLDI V V+NF P D+ YV
Sbjct: 444 PATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 503
Query: 454 HRVGRTARAGREGCAVTFVTDNDRSLLKAIAK 485
HR+GRT RAG+ G A F D + SL + +A+
Sbjct: 504 HRIGRTGRAGKSGLATAFFNDGNTSLARPLAE 535
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 195/372 (52%), Gaps = 19/372 (5%)
Query: 128 LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL- 186
L+L + L + + G H PIQ A + AL GRDI A A TG+GKT AF +PI++RL
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 187 -------FRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEA 239
FR + R L L PTRELA QV ++ A + C + GG+S +Q++
Sbjct: 167 EAGDYTAFR-RSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQS 223
Query: 240 ALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPK 299
AL +VVV TPGR+ID L EAD++L +GF ++ ++ P
Sbjct: 224 ALTRGVDVVVGTPGRIID-LIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPT 282
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLR--LSADPSAKRPASLTXXXXXXXXXXXXNPEA 357
KRQ+MLFSATM V +L + L PL L D K + +
Sbjct: 283 KRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILS 342
Query: 358 VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAE-LHGNLTQAQRLEALEQFRK 416
L+ + +K K I+F+ TK+ A + + L+ A E LHG+++Q QR L FR+
Sbjct: 343 DLITVYAKG--GKTIVFTQTKRDADEVSL--ALSNSIATEALHGDISQHQRERTLNAFRQ 398
Query: 417 QQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
+ LVATDVA+RGLDI V VI++ P D ++VHR GRT RAG+EG A+ T +
Sbjct: 399 GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQ 458
Query: 477 RSLLKAIAKRAG 488
+ ++++ + G
Sbjct: 459 KRTVRSLERDVG 470
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 195/372 (52%), Gaps = 19/372 (5%)
Query: 128 LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL- 186
L+L + L + + G H PIQ A + AL GRDI A A TG+GKT AF +PI++RL
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 187 -------FRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEA 239
FR + R L L PTRELA QV ++ A + C + GG+S +Q++
Sbjct: 167 EAGDYTAFR-RSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQS 223
Query: 240 ALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPK 299
AL +VVV TPGR+ID L EAD++L +GF ++ ++ P
Sbjct: 224 ALTRGVDVVVGTPGRIID-LIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPT 282
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLR--LSADPSAKRPASLTXXXXXXXXXXXXNPEA 357
KRQ+MLFSATM V +L + L PL L D K + +
Sbjct: 283 KRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILS 342
Query: 358 VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAE-LHGNLTQAQRLEALEQFRK 416
L+ + +K K I+F+ TK+ A + + L+ A E LHG+++Q QR L FR+
Sbjct: 343 DLITVYAKG--GKTIVFTQTKRDADEVSL--ALSNSIATEALHGDISQHQRERTLNAFRQ 398
Query: 417 QQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
+ LVATDVA+RGLDI V VI++ P D ++VHR GRT RAG+EG A+ T +
Sbjct: 399 GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQ 458
Query: 477 RSLLKAIAKRAG 488
+ ++++ + G
Sbjct: 459 KRTVRSLERDVG 470
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 190/387 (49%), Gaps = 24/387 (6%)
Query: 125 FLH-LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
F H L+ +L + L Y P PIQ +P+ +SGRD A TGSGKT F LP+L
Sbjct: 192 FWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLR 251
Query: 184 RLLFRP--KQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
+ +P + L + PTREL Q+HS + ++ IRC + GG Q + L
Sbjct: 252 HIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 311
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXX--XXXEADRLLELGFNAEIQELVRMCPK 299
+ +VV TPGRMID L S EADR+ ++GF +I +++
Sbjct: 312 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 371
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEA-- 357
+RQT+LFSAT +V L + L+KP+ + + +T PE+
Sbjct: 372 ERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEV-------RPESDR 424
Query: 358 ---VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQF 414
+L + + K+++F +++ L + LHG Q R + F
Sbjct: 425 FLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDF 484
Query: 415 RKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD 474
+ + L+AT VAARGLD+ ++ V+NF P YVHRVGRT RAGR+GCAVTF+++
Sbjct: 485 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 544
Query: 475 NDRSLLKAIAKRAGSKLKSRTVAEQSI 501
+D AK A +K+ ++EQ +
Sbjct: 545 DD-------AKYAPDLVKALELSEQPV 564
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 179/364 (49%), Gaps = 6/364 (1%)
Query: 125 FLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILER 184
F N +L A LG+ PTPIQA P+AL GRD+ A TGSGKT A+ LP L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 185 LLFRPK--QMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
+ +P+ Q L L PTRELAVQ+ + +R I GG Q LR
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
+V+ATPGR+ID L EADR+L++GF +I+++V RQ
Sbjct: 287 RGVEIVIATPGRLIDML-ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 303 TMLFSATMTEEVNELIKLSLSKPLR-LSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
T+L+SAT EV L + L P + + K S+ N LL
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 362 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDF 421
SK++IF TK+ ++ + A +HG+ TQ++R L +F+ +
Sbjct: 406 QLMDG--SKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 422 LVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLK 481
+ ATDVAARGLD+ ++ V+N+ P L Y+HR+GRT RAG +G A TF T ++ +
Sbjct: 464 MTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAR 523
Query: 482 AIAK 485
+ K
Sbjct: 524 ELVK 527
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 184/363 (50%), Gaps = 16/363 (4%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPIL- 182
+F+ + PLLR + G +HPTPIQ +P+ LSGRD+ A TGSGKT F LP++
Sbjct: 98 NFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMII 157
Query: 183 ----ERLLFRPKQMRAISALCLTPTRELAVQVHSMME----SLAQ--FTDIRCCLIVGGL 232
E ++ AL + P+RELA Q + ++E SL + + +R L +GG+
Sbjct: 158 LALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
Query: 233 STKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQE 292
+ Q ++ ++VVATPGR+ D L EADRL++LGF +I+
Sbjct: 218 DMRSQLDVVKKGVHIVVATPGRLKDILAKK-KMSLDACRLLTLDEADRLVDLGFEDDIRH 276
Query: 293 LVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXX 352
+ +RQT+LFSATM ++ +L KP+ ++ R +
Sbjct: 277 VFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVG----RAGAANLDVIQEVEYVK 332
Query: 353 XNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALE 412
+ V L C + T V+IF K + L ++A +HG Q R A+
Sbjct: 333 QEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAIS 392
Query: 413 QFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFV 472
F+ + D LVATDVA++GLD +Q VIN+ P ++ +YVHR+GRT R G+ G A TF+
Sbjct: 393 LFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFI 452
Query: 473 TDN 475
N
Sbjct: 453 NKN 455
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 183/359 (50%), Gaps = 13/359 (3%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
SF L LLR + G+ P+PIQA P+A+ RDI A A TGSGKT + +P
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 184 RL--LFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
L + +M + L L+PTRELA Q+ + + I C + GG Q +
Sbjct: 222 HLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEI 280
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKR 301
++VVATPGR+ D L EADR+L++GF +I+++V P KR
Sbjct: 281 ERGVDIVVATPGRLNDILE-MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR 339
Query: 302 QTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
QT++++AT +EV ++ L P +++ + A+ + +
Sbjct: 340 QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQI 399
Query: 362 MCSKTFTSKVIIFSGTK----QAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQ 417
+ S+ SK+IIF TK Q A L FG AA +HG+ +QA+R + L QFR
Sbjct: 400 LRSQEPGSKIIIFCSTKRMCDQLARNLTRTFG-----AAAIHGDKSQAERDDVLNQFRSG 454
Query: 418 QVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
+ LVATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 455 RTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQD 513
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 187/373 (50%), Gaps = 18/373 (4%)
Query: 115 SDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKT 174
D I +F + RP+L + G + PTPIQ +P+ L+GRD+ A TGSGKT
Sbjct: 138 GDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKT 197
Query: 175 AAFALPILERLLFRPKQMRAISA------LCLTPTRELAVQVHSMMESL------AQFTD 222
F LP++ + + + M I+A L + P+RELA Q + ++E A +
Sbjct: 198 LVFVLPMI-MIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPP 256
Query: 223 IRCCLIVGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLL 282
+R L +GG+ + Q ++ ++VVATPGR+ D L EADRL+
Sbjct: 257 LRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKK-KMSLDACRYLTLDEADRLV 315
Query: 283 ELGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTX 342
+LGF +I+E+ +RQT+LFSATM ++ + +L KP+ ++ R +
Sbjct: 316 DLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVG----RAGAANL 371
Query: 343 XXXXXXXXXXXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNL 402
+ V L C + + V+IF K + L ++A +HG
Sbjct: 372 DVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGK 431
Query: 403 TQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARA 462
Q R A+ F+ + D LVATDVA++GLD +Q VIN+ P ++ +YVHR+GRT R
Sbjct: 432 DQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 491
Query: 463 GREGCAVTFVTDN 475
G+ G A TF+ N
Sbjct: 492 GKTGIATTFINKN 504
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 189/371 (50%), Gaps = 13/371 (3%)
Query: 128 LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL- 186
L +S +++A + G PIQ A + A+ GRD+ A TG+GKT AF +PI+++++
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 187 FRPKQMRAISALCLT--PTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSM 244
F K R + CL PTRELA QV A D C + GG Q L
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRELNYG 238
Query: 245 PNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQTM 304
+V V TPGR+ID ++ EAD++L++GF +++ +++ P KRQ+M
Sbjct: 239 IDVAVGTPGRIIDLMKRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 305 LFSATMTEEVNELIKLSLSKPLR--LSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
+FSATM + L K L+ PL L D K +T + L+
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357
Query: 363 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAE-LKAAELHGNLTQAQRLEALEQFRKQQVDF 421
K K I+F+ TK+ A RL FGLA+ K LHG+++QAQR L FR
Sbjct: 358 HGKG--GKCIVFTQTKRDADRLA--FGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSI 413
Query: 422 LVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLK 481
LVATDVAARGLD+ V VI++ P + ++VHR GRT RAG++G A+ + +K
Sbjct: 414 LVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVK 473
Query: 482 AIAKRAGSKLK 492
I K GS+
Sbjct: 474 MIEKEVGSRFN 484
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 180/355 (50%), Gaps = 10/355 (2%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
SF + +L + G+ PTPIQ+ P+A+ GRD+ A TGSGKT ++ LP +
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 184 RLLFRPKQMRAIS--ALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
+ +P L L PTRELAVQ+ + I+ I GG+ Q L
Sbjct: 160 HVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDL 219
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKR 301
+ +V+ATPGR+ID + S EADR+L++GF+ +I+++V R
Sbjct: 220 QKGVEIVIATPGRLIDMM-ESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDR 278
Query: 302 QTMLFSATMTEEVNELIKLSLSKPLRL---SADPSAKRPASLTXXXXXXXXXXXXNPEAV 358
QT+ +SAT +EV +L K L P ++ S+D A R ++ N
Sbjct: 279 QTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANR--AIRQIVDVISESQKYNKLVK 336
Query: 359 LLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQ 418
LL S++++F TK+ ++ + A +HG+ +QA+R L +FR +
Sbjct: 337 LLEDIMDG--SRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGK 394
Query: 419 VDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVT 473
+ ATDVAARGLD+ V+ VIN+ P L YVHR+GRT RAG +G A TF T
Sbjct: 395 SPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 178/354 (50%), Gaps = 3/354 (0%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALP-IL 182
SF LLR + G+ PTPIQA P+A+ GRDI A A TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 183 ERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
R + L L+PTRELA Q+ + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
++VVATPGR+ D L EADR+L++GF +I+++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 303 TMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
T++++AT + V ++ L P +++ + A+ + + +
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 363 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFL 422
S+ SKVIIF TK+ +L + AA +HG+ +Q +R L QFR + L
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 423 VATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
VATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 178/354 (50%), Gaps = 3/354 (0%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALP-IL 182
SF LLR + G+ PTPIQA P+A+ GRDI A A TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 183 ERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
R + L L+PTRELA Q+ + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
++VVATPGR+ D L EADR+L++GF +I+++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 303 TMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
T++++AT + V ++ L P +++ + A+ + + +
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 363 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFL 422
S+ SKVIIF TK+ +L + AA +HG+ +Q +R L QFR + L
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 423 VATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
VATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 178/354 (50%), Gaps = 3/354 (0%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALP-IL 182
SF LLR + G+ PTPIQA P+A+ GRDI A A TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 183 ERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
R + L L+PTRELA Q+ + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
++VVATPGR+ D L EADR+L++GF +I+++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 303 TMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
T++++AT + V ++ L P +++ + A+ + + +
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 363 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFL 422
S+ SKVIIF TK+ +L + AA +HG+ +Q +R L QFR + L
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 423 VATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
VATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 178/354 (50%), Gaps = 3/354 (0%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALP-IL 182
SF LLR + G+ PTPIQA P+A+ GRDI A A TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 183 ERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
R + L L+PTRELA Q+ + + I C + GG Q L
Sbjct: 219 HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLE 278
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
++VVATPGR+ D L EADR+L++GF +I+++V+ P KRQ
Sbjct: 279 RGADIVVATPGRLNDIL-EMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQ 337
Query: 303 TMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
T++++AT + V ++ L P +++ + A+ + + +
Sbjct: 338 TLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQIL 397
Query: 363 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFL 422
S+ SKVIIF TK+ +L + AA +HG+ +Q +R L QFR + L
Sbjct: 398 RSQEPGSKVIIFCSTKRMCDQLTRNL-TRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 423 VATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
VATDVAARGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQD 510
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 191/371 (51%), Gaps = 13/371 (3%)
Query: 127 HLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL 186
L +S +++A + G PIQ A + A+ GRD+ A TG+GKT AF +PI+++++
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 187 -FRPKQMRAISALCLT--PTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRS 243
+ K R + LCL PTRELA QV A D C + GG Q L
Sbjct: 168 KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDY 225
Query: 244 MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQT 303
+V V TPGR+ID ++ EAD++L++GF +++ ++ P+KRQ+
Sbjct: 226 GVDVAVGTPGRVIDLMKRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQS 284
Query: 304 MLFSATMTEEVNELIKLSLSKPLR--LSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
M+FSATM + L K L+ PL L D K +T + L+
Sbjct: 285 MMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVT 344
Query: 362 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLA-ELKAAELHGNLTQAQRLEALEQFRKQQVD 420
+K K I+F+ TK+ A RL + LA K LHG+++Q+QR L FR +
Sbjct: 345 EHAKG--GKCIVFTQTKRDADRLS--YALARSFKCEALHGDISQSQRERTLAGFRDGHFN 400
Query: 421 FLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLL 480
LVATDVAARGLD+ V +I++ P + ++VHR GRT RAG++G A+ + + +
Sbjct: 401 ILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAV 460
Query: 481 KAIAKRAGSKL 491
K I + GS+
Sbjct: 461 KIIEREVGSRF 471
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 177/354 (50%), Gaps = 3/354 (0%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F L +LR + G+ PTPIQA P+AL RDI A A TGSGKT + +P
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 184 RLLF-RPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
L R + L L PTRELA Q+ + + I C + GG Q L
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
++VVATPGR+ D L M EADR+L++GF +I+++V P +RQ
Sbjct: 556 RGADIVVATPGRLNDILEMKMIDFQQVSLLVLD-EADRMLDMGFEPQIRKIVNEIPPRRQ 614
Query: 303 TMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
T++++AT +EV ++ L P++++ + A+ + +
Sbjct: 615 TLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQIL 674
Query: 363 CSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFL 422
S+ SKVIIF TK+ L G A +HG+ TQ +R L QFR + L
Sbjct: 675 RSQERGSKVIIFCSTKRLCDHLARSVG-RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVL 733
Query: 423 VATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
+ATDVAARGLDI ++ VIN+ P + YVHR+GRT RAG G A TF T+ D
Sbjct: 734 IATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQD 787
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 178/347 (51%), Gaps = 13/347 (3%)
Query: 136 RACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERL--LFRPKQMR 193
R + G+ P+PIQA P+A+ RDI A A TGSGKT + +P L + +M
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM- 300
Query: 194 AISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMPNVVVATPG 253
+ L L+PTRELA Q+ + + I C + GG Q + ++VVATPG
Sbjct: 301 GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPG 360
Query: 254 RMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQTMLFSATMTEE 313
R+ D L EADR+L++GF +I+++V P KRQT++++AT +E
Sbjct: 361 RLNDILEMK-RISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKE 419
Query: 314 VNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSKTFTSKVII 373
V ++ L P +++ + A+ + + + S+ SK+II
Sbjct: 420 VRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIII 479
Query: 374 FSGTK----QAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAA 429
F TK Q A L FG AA +HG+ +QA+R + L QFR + LVATDVAA
Sbjct: 480 FCSTKRMCDQLARNLTRTFG-----AAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAA 534
Query: 430 RGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
RGLD+ ++ V+N+ P + YVHR+GRT RAG G A TF D D
Sbjct: 535 RGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQD 581
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 190/368 (51%), Gaps = 16/368 (4%)
Query: 125 FLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILER 184
F L +S R + Y+ T +Q+A IP AL GRDI +A TGSGKT AF +PILE+
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 185 L---LFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGL-STKVQEAA 240
L + P+ + + ++PTRELA Q ++ + +F L++GG V++
Sbjct: 133 LHRERWSPED--GVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKER 190
Query: 241 LRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKK 300
+ M N++V PGR++ H+ + EADR+L+ F ++ ++ PK
Sbjct: 191 VHEM-NILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKH 249
Query: 301 RQTMLFSATMTEEVNELIKLSLSKPLRLS--ADPSAKRPASLTXXXXXXXXXXXXNPEAV 358
RQT+LFSAT T++V +L +LSL P +S A+ P SL + +
Sbjct: 250 RQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLD---M 306
Query: 359 LLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAE--LKAAELHGNLTQAQRLEALEQFRK 416
L + S++++F TK+ + F + LHG ++Q +R+ QF +
Sbjct: 307 LWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIE 366
Query: 417 QQVDFLVATDVAARGLDI-MGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDN 475
+Q L TDV ARGLD V V+ CP D+ SY+HRVGRTAR +G ++ F+T +
Sbjct: 367 RQ-SVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPS 425
Query: 476 DRSLLKAI 483
+ +++ +
Sbjct: 426 EEKMIEKL 433
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 193/372 (51%), Gaps = 31/372 (8%)
Query: 128 LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL- 186
LN+ + LLR ++A +P AL GRDI A A TG+GKT AF +PI++RL
Sbjct: 26 LNVLKSLLRN-----------VRAVLVP-ALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 73
Query: 187 -------FRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEA 239
FR + R L L PTRELA QV ++ A + C + GG+S +Q++
Sbjct: 74 EAGDYTAFR-RSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQS 130
Query: 240 ALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPK 299
AL +VVV TPGR+ID L EAD++L +GF ++ ++ P
Sbjct: 131 ALTRGVDVVVGTPGRIID-LIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPT 189
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLR--LSADPSAKRPASLTXXXXXXXXXXXXNPEA 357
KRQ+MLFSATM V +L + L PL L D K + +
Sbjct: 190 KRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILS 249
Query: 358 VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAE-LHGNLTQAQRLEALEQFRK 416
L+ + +K K I+F+ TK+ A + + L+ A E LHG+++Q QR L FR+
Sbjct: 250 DLITVYAKG--GKTIVFTQTKRDADEVSL--ALSNSIATEALHGDISQHQRERTLNAFRQ 305
Query: 417 QQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDND 476
+ LVATDVA+RGLDI V VI++ P D ++VHR GRT RAG+EG A+ T +
Sbjct: 306 GKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQ 365
Query: 477 RSLLKAIAKRAG 488
+ ++++ + G
Sbjct: 366 KRTVRSLERDVG 377
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 190/366 (51%), Gaps = 15/366 (4%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F NL +L C+ + P+PIQ+ P L GRD+ A TGSGKT AF +P +
Sbjct: 117 TFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIM 174
Query: 184 RLLFRPKQMRAIS------ALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQ 237
+L + K++ S L L+PTRELAVQ+ ++ + ++ + GG S Q
Sbjct: 175 HVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQ 234
Query: 238 EAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMC 297
+A+RS ++V+ TPGR+ D L S EADR+L++GF ++ ++
Sbjct: 235 ISAIRSGVDIVIGTPGRLRD-LIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNT 293
Query: 298 PKKRQTMLFSATMTEEVNELIKLSLS-KPLRL---SADPSAKRPASLTXXXXXXXXXXXX 353
K RQ ++FSAT +V++L + + P+++ S D +A +
Sbjct: 294 NKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANH--DVMQIIEVLDERARD 351
Query: 354 NPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQ 413
LL K+ ++V++F+ K A RL+ KA +HGN Q++R +L
Sbjct: 352 QRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSL 411
Query: 414 FRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVT 473
F++ LVATDVAARGLDI V+ VIN+ P YVHR+GRT RAG++G A TF T
Sbjct: 412 FKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
Query: 474 DNDRSL 479
++ L
Sbjct: 472 PLNKGL 477
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 179/380 (47%), Gaps = 28/380 (7%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
S+ L+ LL+A + GY P+PIQ A IPL L RD+ A TGSGKTAAF LP+L
Sbjct: 314 SWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLA 373
Query: 184 RLLFRP-----KQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQE 238
+ P + A+ + PTRELA Q+ A + R IVGG S + Q
Sbjct: 374 YISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQG 433
Query: 239 AALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCP 298
+ +V+ATPGR+ID L EADR++++GF ++ ++ P
Sbjct: 434 LKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLD-EADRMIDMGFEPQVAGVLDAMP 492
Query: 299 KK-----------------RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLT 341
R T +FSATM V L + L P+ ++ + K ++
Sbjct: 493 SSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLIS 552
Query: 342 XXXXXXXXXXXX-NPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHG 400
+ +L + KT I+F TK+ + A + LHG
Sbjct: 553 QHVIMMKESEKFFRLQKLLDELGEKT----AIVFVNTKKNCDSIAKNLDKAGYRVTTLHG 608
Query: 401 NLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTA 460
+Q QR +LE FR ++ + LVATDV RG+DI V VIN+ P+ + Y HR+GRT
Sbjct: 609 GKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTG 668
Query: 461 RAGREGCAVTFVTDNDRSLL 480
RAG+ G A +F+T +D +
Sbjct: 669 RAGKSGVATSFLTLHDTEVF 688
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 182/354 (51%), Gaps = 6/354 (1%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F L+LS ++ + +G+ T IQA IP + G D+ +A TGSGKT AF +P +E
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 184 ---RLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAA 240
R+ F P+ + +C PTRELA+Q + + + L ++ ++GG K +
Sbjct: 215 LLYRVKFTPRNGTGVLVIC--PTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEI 272
Query: 241 LRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKK 300
L N++VATPGR++DHL N+ EADR+LE F ++++++ + PK
Sbjct: 273 LAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 332
Query: 301 RQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLL 360
RQT LFSAT + +V +L ++SL+ P+ + D K + +L
Sbjct: 333 RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLT 392
Query: 361 AMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVD 420
+ K+++F T ++ +F + E+ G + Q +R QF K +
Sbjct: 393 FLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETG 452
Query: 421 FLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARA-GREGCAVTFVT 473
L+ T+VAARGLD V ++ + P + T Y+HRVGRTAR G +G A+ +T
Sbjct: 453 ILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLT 506
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 205/423 (48%), Gaps = 74/423 (17%)
Query: 141 LGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL-FRPKQMRAIS--A 197
+G+ PT +QA IP+ LSGRD+ +A TG+GKT A+ P++ L PK R+ A
Sbjct: 48 MGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFA 107
Query: 198 LCLTPTRELAVQVHSMMESLAQ-FTDIRCCLIVGGLSTKVQEAALRSMPNVVVATPGRMI 256
L + PTREL +QV+ +E L F I ++GG ++A LR ++++ATPGR++
Sbjct: 108 LVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLL 167
Query: 257 DHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRM--------------CPK--K 300
DHL+N+ EAD +LELG+ EI++++++ PK +
Sbjct: 168 DHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQ 227
Query: 301 RQTMLFSATMTEEVNELIKLSLSKPLRLSADP-------SAKRPASLTXXXXXXX--XXX 351
+Q +L SAT+ ++VN+L KLSL P+ + D S + PA+
Sbjct: 228 KQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNK 287
Query: 352 XXNPEA-----------------------VLLAMCSKTF----TSKVIIFSGTKQAA--- 381
NP + LL++ F + KV++F T+ A
Sbjct: 288 SANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFH 347
Query: 382 HRLKIIF-----------GLAEL----KAAELHGNLTQAQRLEALEQFRKQQVDFLVATD 426
+ L F G EL K LHG++ Q R A F+ ++ L++TD
Sbjct: 348 YSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTD 407
Query: 427 VAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAKR 486
VAARGLD V+ +I + CP + T YVHRVGRTAR G +G A+ F+ + LK + K
Sbjct: 408 VAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKH 467
Query: 487 AGS 489
S
Sbjct: 468 GAS 470
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 185/387 (47%), Gaps = 53/387 (13%)
Query: 125 FLH-LNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
F H L+ +L + L Y P PIQA +P+ +SGRD A TGSGKT F LP+L
Sbjct: 397 FWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLR 456
Query: 184 RLLFRP--KQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
+ +P + L + PTREL Q++S + ++ I C + GG Q + L
Sbjct: 457 HIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISEL 516
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXX--XXXXXXXXEADRLLELGFNAEIQELVRMCPK 299
+ +VV TPGRMID L S EADR+ ++GF +I +V+
Sbjct: 517 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRP 576
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAV- 358
RQT+LFSAT +V L + L+KP+ + + +T PE+
Sbjct: 577 DRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDIT-------QLVEIRPESER 629
Query: 359 ---LLAMCSKTF-TSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQF 414
LL + + + KV++F +++ +++ F
Sbjct: 630 FSRLLELLGEWYEKGKVLVFVRSQE-----------------------------KSISDF 660
Query: 415 RKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD 474
+ + L+AT VAARGLD+ ++ V+NF P YVHRVGRT RAGR+GCAVTF+++
Sbjct: 661 KSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 720
Query: 475 NDRSLLKAIAKRAGSKLKSRTVAEQSI 501
+D AK A +K+ ++EQ +
Sbjct: 721 DD-------AKYAPDLVKALELSEQPV 740
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 185/378 (48%), Gaps = 15/378 (3%)
Query: 111 FFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITG 170
FF+ D + +SF + L LLR A G+ P+ IQ I G D+ A +G
Sbjct: 30 FFTSYDDVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 171 SGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVG 230
+GKTA F +L++L F Q +A L L PTRELA Q+ +M +L + ++ VG
Sbjct: 87 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 143
Query: 231 GLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 290
G S + + L++ +VVV TPGR+ D L+ EAD +L GF +I
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 202
Query: 291 QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXX 350
++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRD-ELTLEGIKQFYV 257
Query: 351 XXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
E L +C T ++ +IF T++ L + + HG++ Q R
Sbjct: 258 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 317
Query: 408 LEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGC 467
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 318 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 377
Query: 468 AVTFVTDNDRSLLKAIAK 485
A+ FVT +D +L I K
Sbjct: 378 AINFVTRDDERMLFDIQK 395
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 182/361 (50%), Gaps = 19/361 (5%)
Query: 130 LSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLL--- 186
LS ++ A + TP+QAA IPL S +D+ A TGSGKT AF +P++E L
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 187 -FRPKQMRAISALCLTPTRELAVQVHSMMES-LAQFTDIRCCLIVGGLSTKVQEAALRSM 244
F PK + + + ++PTREL+ Q++++ + ++ ++ L+VGG K +
Sbjct: 83 SFPPKPHQVMGVI-ISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEE 141
Query: 245 P-NVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQT 303
NV++ TPGR+ D + EADRLLE+GF ++ ++ PK+R+T
Sbjct: 142 GCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRT 201
Query: 304 MLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPAS--LTXXXX------XXXXXXXXNP 355
LFSAT TE V EL K L P+R+ +K +S LT
Sbjct: 202 GLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKK 261
Query: 356 EAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIF----GLAELKAAELHGNLTQAQRLEAL 411
+ L+ + K K+I+F T + ++ L + +HG++ Q R +AL
Sbjct: 262 SSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKAL 321
Query: 412 EQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTF 471
F K L+ TDVAARGLDI G+ V+ + P+D + HR GRTAR GR+G A+ F
Sbjct: 322 ASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVF 381
Query: 472 V 472
+
Sbjct: 382 L 382
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 185/378 (48%), Gaps = 15/378 (3%)
Query: 111 FFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITG 170
FF+ D + +SF + L LLR A G+ P+ IQ I G D+ A +G
Sbjct: 20 FFTSYDDVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 76
Query: 171 SGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVG 230
+GKTA F +L++L F Q +A L L PTRELA Q+ +M +L + ++ VG
Sbjct: 77 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 133
Query: 231 GLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 290
G S + + L++ +VVV TPGR+ D L+ EAD +L GF +I
Sbjct: 134 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 192
Query: 291 QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXX 350
++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 193 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRD-ELTLEGIKQFYV 247
Query: 351 XXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
E L +C T ++ +IF T++ L + + HG++ Q R
Sbjct: 248 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 307
Query: 408 LEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGC 467
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 308 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 367
Query: 468 AVTFVTDNDRSLLKAIAK 485
A+ FVT +D +L I K
Sbjct: 368 AINFVTRDDERMLFDIQK 385
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 183/373 (49%), Gaps = 15/373 (4%)
Query: 111 FFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITG 170
FF+ D + +SF + L LLR A G+ P+ IQ I G D+ A +G
Sbjct: 30 FFTSYDDVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 171 SGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVG 230
+GKTA F +L++L F Q +A L L PTRELA Q+ +M +L + ++ VG
Sbjct: 87 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 143
Query: 231 GLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 290
G S + + L++ +VVV TPGR+ D L+ EAD +L GF +I
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 202
Query: 291 QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXX 350
++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRD-ELTLEGIKQFYV 257
Query: 351 XXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
E L +C T ++ +IF T++ L + + HG++ Q R
Sbjct: 258 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 317
Query: 408 LEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGC 467
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 318 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 377
Query: 468 AVTFVTDNDRSLL 480
A+ FVT +D +L
Sbjct: 378 AINFVTRDDERML 390
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 185/380 (48%), Gaps = 15/380 (3%)
Query: 109 KSFFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAI 168
++F++ D + DSF + L LLR A G+ P+ IQ I G D+ A
Sbjct: 30 ETFYTNYDEV---CDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQ 86
Query: 169 TGSGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLI 228
+G+GKTA F +L++L Q +A L L PTRELA Q+ +M +L + ++
Sbjct: 87 SGTGKTATFCSGVLQQLDISLVQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKAQAC 143
Query: 229 VGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNA 288
VGG S + + L+S +VVV TPGR+ D LR EAD +L GF
Sbjct: 144 VGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQ-SLRADAIKMFVLDEADEMLSRGFKD 202
Query: 289 EIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXX 348
+I ++ ++ P K Q +FSATM E E+ + ++KP+R+ KR LT
Sbjct: 203 QIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILV----KRD-ELTLEGIKQF 257
Query: 349 XXXXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQA 405
E L +C T ++ +IF T++ L + + HG++ Q
Sbjct: 258 YVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN 317
Query: 406 QRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGRE 465
R + +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+
Sbjct: 318 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRK 377
Query: 466 GCAVTFVTDNDRSLLKAIAK 485
G A+ F+T D ++ I +
Sbjct: 378 GVAINFMTSEDERMMADIQR 397
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 186/378 (49%), Gaps = 15/378 (3%)
Query: 111 FFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITG 170
FF+ D + +SF + L LLR A G+ P+ IQ I G D+ A +G
Sbjct: 30 FFTSYDEVH---ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
Query: 171 SGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVG 230
+GKTA F +L++L + Q +A L L PTRELA Q+ +M +L + ++ VG
Sbjct: 87 TGKTATFCSGVLQQLDYALLQCQA---LVLAPTRELAQQIEKVMRALGDYQGVKVHACVG 143
Query: 231 GLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 290
G S + + L++ +VVV TPGR+ D LR EAD +L GF +I
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQI 202
Query: 291 QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXX 350
++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRD-ELTLEGIKQFYV 257
Query: 351 XXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
+ L +C T ++ +IF T++ L + + HG++ Q R
Sbjct: 258 NVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 317
Query: 408 LEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGC 467
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 318 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 377
Query: 468 AVTFVTDNDRSLLKAIAK 485
A+ FVT +D+ +L I K
Sbjct: 378 AINFVTLDDQRMLFDIQK 395
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 175/381 (45%), Gaps = 8/381 (2%)
Query: 112 FSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGS 171
+ +D + + F L R LL+ G+ P+PIQ IP+AL+G DI A A G+
Sbjct: 113 YQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 172
Query: 172 GKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGG 231
GKT AF +P+LE++ P I A+ L PTRELA+Q + + L+++ +I+ + GG
Sbjct: 173 GKTGAFCIPVLEKI--DPNN-NVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG 229
Query: 232 LSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQ 291
S + L +++V TPGR++D L EAD+LL F ++
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILD-LTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLE 288
Query: 292 ELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXX 351
EL++ P+ RQ ++FSAT V L KP ++ +L
Sbjct: 289 ELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL----MDQLTLMGVTQYYAFVE 344
Query: 352 XXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEAL 411
L + SK ++ IIF + L +H + Q R
Sbjct: 345 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVF 404
Query: 412 EQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTF 471
+FR LV TD+ RG+DI V VINF PR SY+HRVGR+ R G G AV
Sbjct: 405 HEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 464
Query: 472 VTDNDRSLLKAIAKRAGSKLK 492
VT DR + + G+++K
Sbjct: 465 VTYEDRFKMYQTEQELGTEIK 485
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 175/381 (45%), Gaps = 8/381 (2%)
Query: 112 FSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGS 171
+ +D + + F L R LL+ G+ P+PIQ IP+AL+G DI A A G+
Sbjct: 113 YQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 172
Query: 172 GKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGG 231
GKT AF +P+LE++ P I A+ L PTRELA+Q + + L+++ +I+ + GG
Sbjct: 173 GKTGAFCIPVLEKI--DPNN-NVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG 229
Query: 232 LSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQ 291
S + L +++V TPGR++D L EAD+LL F ++
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILD-LTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLE 288
Query: 292 ELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXX 351
EL++ P+ RQ ++FSAT V L KP ++ +L
Sbjct: 289 ELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL----MDQLTLMGVTQYYAFVE 344
Query: 352 XXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEAL 411
L + SK ++ IIF + L +H + Q R
Sbjct: 345 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVF 404
Query: 412 EQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTF 471
+FR LV TD+ RG+DI V VINF PR SY+HRVGR+ R G G AV
Sbjct: 405 HEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 464
Query: 472 VTDNDRSLLKAIAKRAGSKLK 492
VT DR + + G+++K
Sbjct: 465 VTYEDRFKMYQTEQELGTEIK 485
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 171/381 (44%), Gaps = 8/381 (2%)
Query: 112 FSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGS 171
+ D + + F L R LLR G+ P+PIQ IP+AL+G DI A A G+
Sbjct: 143 YQTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 202
Query: 172 GKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGG 231
GKT AF +P LE++ + I A+ L PTRELA+Q + + L+++ I + GG
Sbjct: 203 GKTGAFCIPTLEKI---DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGG 259
Query: 232 LSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQ 291
S + L +++V TPGR++D L EAD+LL + F I+
Sbjct: 260 TSLRDDIMRLYQPVHLLVGTPGRILD-LAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIE 318
Query: 292 ELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXX 351
EL++ P+ RQ ++FSAT V L KP ++ +L
Sbjct: 319 ELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINL----MDQLTLMGVTQYYAFVE 374
Query: 352 XXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEAL 411
L + SK ++ IIF + L +H + Q R
Sbjct: 375 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVF 434
Query: 412 EQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTF 471
FR LV TD+ RG+DI V VINF PR SY+HRVGR+ R G G AV
Sbjct: 435 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 494
Query: 472 VTDNDRSLLKAIAKRAGSKLK 492
VT DR + + G+++K
Sbjct: 495 VTYEDRFKMYQTEQELGTEIK 515
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 186/379 (49%), Gaps = 10/379 (2%)
Query: 118 ISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAF 177
+ H+ F L LLRA G+ HP+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 178 ALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFT-DIRCCLIVGGLSTKV 236
L L+++ P Q +SAL L TRELA Q+ + + + D + + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 237 QEAALRS-MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIQELV 294
+ L++ P++VV TPGR++ L E D++LE L ++QE+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 295 RMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXN 354
+M P +Q M+FSAT+++E+ + K + P+ + D AK +L
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK--LTLHGLVQHYIKLSEME 274
Query: 355 PEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQF 414
L + ++V+IF + A L + + +H ++Q +RL + F
Sbjct: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSF 334
Query: 415 RKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD 474
++ LVATD+ RG+DI V VIN+ P +Y+HRVGR R G +G A+TFV
Sbjct: 335 KEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394
Query: 475 -NDRSLLKAIAKRAGSKLK 492
+D +L + +R +K
Sbjct: 395 ASDSEVLNQVQERFEVDIK 413
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 186/379 (49%), Gaps = 10/379 (2%)
Query: 118 ISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAF 177
+ H+ F L LLRA G+ HP+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 178 ALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFT-DIRCCLIVGGLSTKV 236
L L+++ P Q +SAL L TRELA Q+ + + + D + + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 237 QEAALRS-MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIQELV 294
+ L++ P++VV TPGR++ L E D++LE L ++QE+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 295 RMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXN 354
+M P +Q M+FSAT+++E+ + K + P+ + D AK +L
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK--LTLHGLVQHYIKLSEME 274
Query: 355 PEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQF 414
L + ++V+IF + A L + + +H ++Q +RL + F
Sbjct: 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSF 334
Query: 415 RKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD 474
++ LVATD+ RG+DI V VIN+ P +Y+HRVGR R G +G A+TFV
Sbjct: 335 KEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394
Query: 475 -NDRSLLKAIAKRAGSKLK 492
+D +L + +R +K
Sbjct: 395 ASDSEVLNQVQERFEVDIK 413
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 195/414 (47%), Gaps = 19/414 (4%)
Query: 118 ISFHADSFL------HLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGS 171
I+ +DS+L LS L+ + G+ T +Q A +PL L G+DI A A TG+
Sbjct: 69 IAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGT 128
Query: 172 GKTAAFALPILERLLFRPKQMR-----AISALCLTPTRELAVQVHSMMESLAQF-TDIRC 225
GKT AF LP +E ++ P R I L + PTRELA Q + L ++ I
Sbjct: 129 GKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGV 188
Query: 226 CLIVGGLSTKVQEAALRSMP-NVVVATPGRMIDHLRNS--MXXXXXXXXXXXXXEADRLL 282
+++GG ++ L+ P ++VATPGR+ DH+ N+ EAD LL
Sbjct: 189 QVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLL 248
Query: 283 ELGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTX 342
++GF EI+ ++ PK+RQT LFSAT+++EV ++ ++L + +
Sbjct: 249 DMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQK 308
Query: 343 XXXXXXXXXXXNPEAVLLAMCSKTFTS----KVIIFSGTKQAAHRLKIIFGLAELKAAEL 398
++L + K T KVIIF T + + G L E+
Sbjct: 309 VSQMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREI 368
Query: 399 HGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGR 458
H Q+ R ++FRK + LV +DV+ARG+D V V+ P D Y+HR+GR
Sbjct: 369 HSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGR 428
Query: 459 TARAGREGCAVTFVTDNDRSLLKAIAKRAGSKLKSRTVAEQSIHKWSQIIDQME 512
T R G+EG V + + L ++ +K + +++ K + + Q+E
Sbjct: 429 TGRKGKEGEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVE 482
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 177/372 (47%), Gaps = 12/372 (3%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
SF + ++ +LR GY P+ IQ + L GRD+ A A +G+GKT+ A+ + +
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 184 RLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRS 243
+ R + L L+P+RELA Q ++++ T+I+ +GG S L
Sbjct: 83 IVNISS---RKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLER 139
Query: 244 MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQT 303
+ V TPGR+ D ++ E+D +L G +I ++ R P Q
Sbjct: 140 GVHAVSGTPGRVYDMIKRG-SLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQV 198
Query: 304 MLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAMC 363
L SAT+ +E+ E+ + ++ P+R+ +P LT E +C
Sbjct: 199 CLISATLPQEILEMTEKFMTDPVRILV-----KPDELTLEGIKQYYVDVDKEEWKFDTLC 253
Query: 364 ---SKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVD 420
+ ++ IIF T+Q L + + +HG+ Q +R + + QFR +
Sbjct: 254 DLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSR 313
Query: 421 FLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLL 480
L+A+DV ARG+D+ V VIN+ P + Y+HR+GR R GREG A+ FV +D L
Sbjct: 314 VLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDL 373
Query: 481 KAIAKRAGSKLK 492
K I + G+K++
Sbjct: 374 KDIERHYGTKIR 385
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 184/378 (48%), Gaps = 20/378 (5%)
Query: 111 FFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITG 170
FF+ D + +SF + L LLR G+ P+ IQ I G D+ A +G
Sbjct: 30 FFTSYDDVH---ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSG 81
Query: 171 SGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVG 230
+GKTA F +L++L F Q +A L L PTRELA Q+ +M +L + ++ VG
Sbjct: 82 TGKTATFCSGVLQQLDFSLIQCQA---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 138
Query: 231 GLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 290
G S + + L++ +VVV TPGR+ D L+ EAD +L GF +I
Sbjct: 139 GTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ-SLRADNIKMFVLDEADEMLSRGFKDQI 197
Query: 291 QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXX 350
++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 198 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRD-ELTLEGIKQFYV 252
Query: 351 XXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
E L +C T ++ +IF T++ L + + HG++ Q R
Sbjct: 253 NVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 312
Query: 408 LEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGC 467
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 313 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 372
Query: 468 AVTFVTDNDRSLLKAIAK 485
A+ FVT +D +L I K
Sbjct: 373 AINFVTRDDERMLFDIQK 390
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 177/358 (49%), Gaps = 13/358 (3%)
Query: 125 FLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILER 184
F LS L+A + G+ T +Q A +P+ L G+D+ A A TG+GKT AF LP +E
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 185 LLFRPKQMR-----AISALCLTPTRELAVQVHSMMESLAQF-TDIRCCLIVGGLSTKVQE 238
++ P R I L + PTRELA Q + +L ++ I +++GG ++
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQ 503
Query: 239 AALRSMP-NVVVATPGRMIDHLRNS--MXXXXXXXXXXXXXEADRLLELGFNAEIQELVR 295
+++ P ++VATPGR+ DH+ N+ EAD LL++GF +I+ ++
Sbjct: 504 RRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA 563
Query: 296 MCPKKRQTMLFSATMTEEVNELIKLSLSKP---LRLSADPSAKRPASLTXXXXXXXXXXX 352
PK+RQT LFSAT+ EEV ++ ++L + + + S + +T
Sbjct: 564 AVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRH 623
Query: 353 XNPEAVLLA-MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEAL 411
+ VLL + KVIIF T + + L E+H Q+ R
Sbjct: 624 FSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVS 683
Query: 412 EQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAV 469
++FRK + LV +DV+ARG+D V V+ P D Y+HR+GRT R G+EG V
Sbjct: 684 DEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGV 741
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 169/371 (45%), Gaps = 8/371 (2%)
Query: 122 ADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPI 181
+ F L R LL G+ P+PIQ IP+AL+GRDI A A G+GKTAAF +P+
Sbjct: 130 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPV 189
Query: 182 LERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
LE++ + I A+ + PTRELA+Q + + L + I+ + GG S K L
Sbjct: 190 LEKI---DQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 246
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKR 301
+++V TPGR++D L EAD+LL F ++ L+ P+ R
Sbjct: 247 YQPVHLLVGTPGRILD-LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR 305
Query: 302 QTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
Q ++FSAT V + L+ P + + +L L
Sbjct: 306 QILMFSATFPVTVKDFKDRFLTNPYVI----NLMDELTLKGITQFYAFVEERQKIHCLNT 361
Query: 362 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDF 421
+ SK ++ IIF + L +H + Q R FR
Sbjct: 362 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 421
Query: 422 LVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLK 481
LV TD+ RG+DI V VINF P++ +Y+HRVGR+ R G G AV +T DR L
Sbjct: 422 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 481
Query: 482 AIAKRAGSKLK 492
I + G+++K
Sbjct: 482 RIEQELGTEIK 492
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 169/371 (45%), Gaps = 8/371 (2%)
Query: 122 ADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPI 181
+ F L R LL G+ P+PIQ IP+AL+GRDI A A G+GKTAAF +P+
Sbjct: 130 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPV 189
Query: 182 LERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAAL 241
LE++ + I A+ + PTRELA+Q + + L + I+ + GG S K L
Sbjct: 190 LEKI---DQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 246
Query: 242 RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKR 301
+++V TPGR++D L EAD+LL F ++ L+ P+ R
Sbjct: 247 YQPVHLLVGTPGRILD-LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR 305
Query: 302 QTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
Q ++FSAT V + L+ P + + +L L
Sbjct: 306 QILMFSATFPVTVKDFKDRFLTNPYVI----NLMDELTLKGITQFYAFVEERQKIHCLNT 361
Query: 362 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDF 421
+ SK ++ IIF + L +H + Q R FR
Sbjct: 362 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 421
Query: 422 LVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLK 481
LV TD+ RG+DI V VINF P++ +Y+HRVGR+ R G G AV +T DR L
Sbjct: 422 LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 481
Query: 482 AIAKRAGSKLK 492
I + G+++K
Sbjct: 482 RIEQELGTEIK 492
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 181/372 (48%), Gaps = 13/372 (3%)
Query: 125 FLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILER 184
F H LS L+A + GY T +Q A +P+ L G+D+ A A TG+GKT AF LP +E
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 185 LLFRP-----KQMRAISALCLTPTRELAVQVHSMMESLAQF-TDIRCCLIVGGLSTKVQE 238
++ P + I AL + PTRELA Q + +L ++ I +++GG +++
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 239 AALRSMP-NVVVATPGRMIDHLRNS--MXXXXXXXXXXXXXEADRLLELGFNAEIQELVR 295
+++ P ++VATPGR+ DH+ N+ EAD LL++GF +I+ ++
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIIS 501
Query: 296 MCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNP 355
PK+RQT LFSAT+ EEV ++ ++L + +
Sbjct: 502 AVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRH 561
Query: 356 EAVLLAMCSKTFTS----KVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEAL 411
++L + + KVI+F T + + G L E+H Q+ R
Sbjct: 562 FSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVS 621
Query: 412 EQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTF 471
+FRK + LV +DV+ARG+D V V+ P+D Y+HR+GRT R G+EG +
Sbjct: 622 NEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILL 681
Query: 472 VTDNDRSLLKAI 483
+ + L ++
Sbjct: 682 LAPWEEYFLSSL 693
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 185/378 (48%), Gaps = 20/378 (5%)
Query: 111 FFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITG 170
FF+ D + +SF + L LLR G+ P+ IQ I G D+ A +G
Sbjct: 30 FFTSYDEVH---ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSG 81
Query: 171 SGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVG 230
+GKTA F +L++L + Q +A L L PTRELA Q+ +M +L + ++ VG
Sbjct: 82 TGKTATFCSGVLQQLDYALLQCQA---LVLAPTRELAQQIEKVMRALGDYQGVKVHACVG 138
Query: 231 GLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI 290
G S + + L++ +VVV TPGR+ D LR EAD +L GF +I
Sbjct: 139 GTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ-SLRPDCIKMFVLDEADEMLSRGFKDQI 197
Query: 291 QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXX 350
++ ++ P K Q +FSATM E E+ + +SKP+R+ KR LT
Sbjct: 198 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILV----KRD-ELTLEGIKQFYV 252
Query: 351 XXXNPEAVLLAMCSKTFT---SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
+ L +C T ++ +IF T++ L + + HG++ Q R
Sbjct: 253 NVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTR 312
Query: 408 LEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGC 467
+ +FR L+ TD+ ARG+D+ V VINF P +Y+HR+GR+ R GR+G
Sbjct: 313 DIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGV 372
Query: 468 AVTFVTDNDRSLLKAIAK 485
A+ FVT +D+ +L I K
Sbjct: 373 AINFVTLDDQRMLFDIQK 390
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 193/406 (47%), Gaps = 34/406 (8%)
Query: 130 LSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLLFRP 189
+S PL +A G PIQA+ + L G D+ A TG GKT AF LPILE L+ P
Sbjct: 103 ISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGP 162
Query: 190 KQM-------RAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
+ R+ S L L PTRELA QV + ++ + C + GG S VQE L+
Sbjct: 163 AKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLK 222
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPK--K 300
++VV TPGR+ DH+ EAD +L +GF +++ ++ K
Sbjct: 223 RGVDIVVGTPGRIKDHIERQ-NLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTK 281
Query: 301 RQTMLFSATMTEEVNELIKLSLS---KPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEA 357
QT+LFSAT+ V + L K + L + K S+ A
Sbjct: 282 VQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAM----A 337
Query: 358 VLLAMCSKTFTS--KVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFR 415
L+ ++S + IIF+ TK L GL + A LHG + Q+QR L FR
Sbjct: 338 RLIPDIISCYSSGGQTIIFAETKVQVSELS---GLLDGSRA-LHGEIPQSQREVTLAGFR 393
Query: 416 KQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDN 475
+ LVAT+VAARGLDI VQ +I PR++ +Y+HR GRT RAG G AVT D+
Sbjct: 394 NGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLY-DS 452
Query: 476 DRSLLKAIAKRAGSKLK----------SRTVAEQSIHKWSQIIDQM 511
+S + I K AG K + +R+ ++ K Q+ D +
Sbjct: 453 RKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSV 498
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 176/357 (49%), Gaps = 20/357 (5%)
Query: 130 LSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE---RLL 186
LS ++ A G+ TP+QA IP S +D+ A TGSGKT AF LP +E R
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 187 FRPKQMRAISALCLTPTRELAVQVHSMMES-LAQFTDIRCCLIVGG------LSTKVQEA 239
P + + + ++PTREL+ Q+H + E ++ ++ L+VGG ++T +E
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 240 ALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPK 299
A N+++ TPGR+ D ++ EADRLL++GF ++ ++ PK
Sbjct: 143 A-----NLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPK 197
Query: 300 KRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVL 359
+R+T LFSAT T+ V +L K L + + + +K S + + L
Sbjct: 198 QRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTS-SGLYCEYLKCEADQKSSQL 256
Query: 360 LAMCSKTFTSKVIIFSGTKQAAHRLKIIFG----LAELKAAELHGNLTQAQRLEALEQFR 415
+ + + K+++F T ++ L + HG + Q R AL F
Sbjct: 257 VHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFT 316
Query: 416 KQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFV 472
+ L+ TDVAARGLDI G+ V+ + P+D ++HRVGRTAR R+G A+ F+
Sbjct: 317 EASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFL 373
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 181/386 (46%), Gaps = 13/386 (3%)
Query: 109 KSFFSPSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAI 168
K F +DGI SF + + +LR G+ P+ IQ + L GRD+ A A
Sbjct: 22 KLVFETTDGIE-PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQ 80
Query: 169 TGSGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLI 228
+G+GKT+ AL + + + R + AL L+PTRELA Q ++++ +I+
Sbjct: 81 SGTGKTSMIALSVCQVV---DTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHAC 137
Query: 229 VGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNA 288
+GG S L +VV TPGR+ D ++ E+D +L GF
Sbjct: 138 IGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRR-SLRTRAIKLLILDESDEMLSRGFKD 196
Query: 289 EIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXX 348
+I ++ R P Q L SAT+ E+ E+ +++P+++ KR LT
Sbjct: 197 QIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILV----KRD-ELTLEGIKQF 251
Query: 349 XXXXXNPEAVLLAMCS--KTFT-SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQA 405
E +C T T ++ +IF TK+ L + +HG++ Q
Sbjct: 252 FVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQK 311
Query: 406 QRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGRE 465
+R + +FR L+ TDV ARG+D+ V VIN+ P + Y+HR+GR+ R GR+
Sbjct: 312 ERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRK 371
Query: 466 GCAVTFVTDNDRSLLKAIAKRAGSKL 491
G A+ FV +D +L+ I + +++
Sbjct: 372 GVAINFVKSDDIKILRDIEQYYSTQI 397
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 188/419 (44%), Gaps = 67/419 (15%)
Query: 134 LLRACQALGYIHPTPIQAACIPLA-LSGRDICASAITGSGKTAAFALPILERLLFRPKQM 192
L+++ L + PT IQ AC +A G+D+ +A TGSGKT AF LPIL+RLL +++
Sbjct: 201 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKV 260
Query: 193 RAI-----------------SALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTK 235
+ AL +TPTRELA+QV +E+ A+ ++ IVGG+ ++
Sbjct: 261 GKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSE 320
Query: 236 VQEAALRSMPNVVVATPGRMIDHLR--NSMXXXXXXXXXXXXXEADRLLELGFNAEIQEL 293
QE L+ P +VVATPGR+ + + EADR++E G E+Q +
Sbjct: 321 KQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSI 380
Query: 294 VRMCP------------------------KKRQTMLFSATMT------------------ 311
+ + P KKRQT +FSAT+
Sbjct: 381 LDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQ 440
Query: 312 ---EEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPE--AVLLAMCSKT 366
EVN + LS +R + S+ E A L + S
Sbjct: 441 SSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVH 500
Query: 367 FTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATD 426
+ I+F + + + + L L + Q RL+++++FR + L+ATD
Sbjct: 501 GQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATD 560
Query: 427 VAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAK 485
+ ARG+DI V+T+I++ P YVHR GRTARA +GC++ + N+ S + K
Sbjct: 561 LVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCK 619
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 189/418 (45%), Gaps = 47/418 (11%)
Query: 118 ISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAF 177
+ H+ F L LLRA G+ HP+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 178 ALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFT-DIRCCLIVGGLSTKV 236
L L+++ P Q +SAL L TRELA Q+ + + + D + + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 237 QEAALRS-MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIQELV 294
+ L++ P++VV TPGR++ L E D++LE L ++QE+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 295 RMCPKKRQTMLFSATMTEEVNELIKLSLSKPLR-LSAD---------------------- 331
+M P +Q M+FSAT+++E+ + K + LR LS D
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRA 276
Query: 332 ------PSAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSKTFT----------SKVIIFS 375
PS P + + L+ K ++V+IF
Sbjct: 277 RMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFV 336
Query: 376 GTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIM 435
+ A L + + +H ++Q +RL + F++ LVATD+ RG+DI
Sbjct: 337 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIE 396
Query: 436 GVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD-NDRSLLKAIAKRAGSKLK 492
V VIN+ P +Y+HRVGR R G +G A+TFV +D +L + +R +K
Sbjct: 397 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIK 454
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 173/352 (49%), Gaps = 8/352 (2%)
Query: 134 LLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLLFRPKQMR 193
+LR LG+ PTPIQ IP+ LSGR+ A A TGSGKT AF P+L +L RP
Sbjct: 152 ILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLK-RP-STD 209
Query: 194 AISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMPNVVVATPG 253
I A+ L+P RELA Q + L + ++ L+ L + L +V+++TP
Sbjct: 210 GIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSKLWC--DVLISTPM 267
Query: 254 RMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQT-MLFSATMTE 312
R+ ++ + E+D+L E +I +V+ C LFSAT+ +
Sbjct: 268 RLKRAIK-AKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPD 326
Query: 313 EVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSKTFTSKVI 372
V EL + + +R+ K AS T L +++ V+
Sbjct: 327 SVEELARSIMHDAVRVII--GRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVL 384
Query: 373 IFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGL 432
IF +K+ A L ++A +H +L +R A++QFR + L+ATDV ARG+
Sbjct: 385 IFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGM 444
Query: 433 DIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIA 484
D G+ VIN+ P ++Y+HR+GR+ RAGR G A+TF T+ D L+ IA
Sbjct: 445 DFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIA 496
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 182/377 (48%), Gaps = 12/377 (3%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F L LL + GY PTPIQ IP AL+G+ + ASA TGSGKTA+F +PI+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 184 RLLFR-----PKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQE 238
R Q R A+ L PTREL VQV + L + + L+VGG Q
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 239 AALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCP 298
++ +++ TPGR++D L + E D +L+ GF ++ ++ +
Sbjct: 231 YRIQQGVELIIGTPGRVVD-LLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL- 288
Query: 299 KKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAV 358
+ Q +LFSAT++ EV E + SL+K + L + + +P +
Sbjct: 289 SQPQVLLFSATISREV-EKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 347
Query: 359 LLAMCSKTFTSKVIIFSGTKQAAHRL-KIIFGLAELKAAELHGNLTQAQRLEALEQFRKQ 417
+ F +++ ++ A L I + +KA +HG +R + + F
Sbjct: 348 DILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGG 407
Query: 418 QVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDR 477
+V LV+T V RG+D++ V+ VI F P + Y+H +GR +R G +G A+ FV ++DR
Sbjct: 408 EVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR 467
Query: 478 SL---LKAIAKRAGSKL 491
+L L A K +G+ +
Sbjct: 468 NLFPDLVAALKSSGAAI 484
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 182/377 (48%), Gaps = 12/377 (3%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
+F L LL + GY PTPIQ IP AL+G+ + ASA TGSGKTA+F +PI+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 184 RLLFR-----PKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQE 238
R Q R A+ L PTREL VQV + L + + L+VGG Q
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 239 AALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCP 298
++ +++ TPGR++D L + E D +L+ GF ++ ++ +
Sbjct: 231 YRIQQGVELIIGTPGRVVD-LLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL- 288
Query: 299 KKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAV 358
+ Q +LFSAT++ EV E + SL+K + L + + +P +
Sbjct: 289 SQPQVLLFSATISREV-EKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 347
Query: 359 LLAMCSKTFTSKVIIFSGTKQAAHRL-KIIFGLAELKAAELHGNLTQAQRLEALEQFRKQ 417
+ F +++ ++ A L I + +KA +HG +R + + F
Sbjct: 348 DILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGG 407
Query: 418 QVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDR 477
+V LV+T V RG+D++ V+ VI F P + Y+H +GR +R G +G A+ FV ++DR
Sbjct: 408 EVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR 467
Query: 478 SL---LKAIAKRAGSKL 491
+L L A K +G+ +
Sbjct: 468 NLFPDLVAALKSSGAAI 484
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 169/365 (46%), Gaps = 29/365 (7%)
Query: 145 HPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLLFRP-----KQMRAISALC 199
HP IPL L RD+ + TGSGKTAAF LP+L + P Q AL
Sbjct: 224 HPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALV 283
Query: 200 LTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMPNVVVATPGRMIDHL 259
+ PTRELA Q+ +++ + I G S + Q L +V+ATPGR++D L
Sbjct: 284 MVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCL 343
Query: 260 RNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKK-----------------RQ 302
EADR++++ F ++ E++ + P R
Sbjct: 344 ERRY-VVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRT 402
Query: 303 TMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAM 362
T +FSATM V L + L P+ ++ + K +T + L+
Sbjct: 403 TYMFSATMLLSVERLARKFLRNPVVVTIGETTK---FITQQVIMTKESDKFSRLKKLIDD 459
Query: 363 CSKTFTSKVIIFSGTK-QAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDF 421
T+ I+F T+ + + +K + + + LH +Q QR +LE+F+K++ +
Sbjct: 460 LGDDKTA--IVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNV 517
Query: 422 LVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLK 481
LV TDV RGLDI+ + VIN+ P + Y HR+GRT RAG+ G A TF+T D+ +
Sbjct: 518 LVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFY 577
Query: 482 AIAKR 486
+ ++
Sbjct: 578 GLKQK 582
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 183/390 (46%), Gaps = 27/390 (6%)
Query: 114 PSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGK 173
P D I + A F +S L+A A G + T +Q A + L G+D A TG+GK
Sbjct: 320 PHDSI-YSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGK 378
Query: 174 TAAFALPILERLLFRPKQMRAIS------ALCLTPTRELAVQVHSMMESLAQFTD-IRCC 226
+ AF LP +E +L + ++ AL L PTRELA Q+ + ++L +F D I
Sbjct: 379 SMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQ 438
Query: 227 LIVGGLSTKVQEAALRSMP-NVVVATPGRMIDHLRN--SMXXXXXXXXXXXXXEADRLLE 283
++GG K+ + L S P +++ATPGR++DH+ N + EAD LL+
Sbjct: 439 TLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLD 498
Query: 284 LGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASL--T 341
LGF ++++++ P++RQ++LFSAT+ +EV + +L L + D S L
Sbjct: 499 LGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKR------DHSYIDTIGLGCV 552
Query: 342 XXXXXXXXXXXXNPEA--------VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAEL 393
P +L + T K+I+F T + + +L
Sbjct: 553 ETHDKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKL 612
Query: 394 KAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYV 453
E+H Q R ++F++ LV +DV+ARG++ V VI P D Y+
Sbjct: 613 NVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYI 672
Query: 454 HRVGRTARAGREGCAVTFVTDNDRSLLKAI 483
HR+GRT R G+ G + + +R L +
Sbjct: 673 HRLGRTGREGKGGEGLLLIAPWERYFLDEL 702
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 168/384 (43%), Gaps = 45/384 (11%)
Query: 124 SFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE 183
SF L L L+RA G PT IQ + IP L G+D+ A A TGSGKT A+ LP+L+
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 184 RLLFR---PKQMRAISALCLTPTRELAVQVHSMMESLAQF--TDIRCCLIVGGLSTKVQE 238
+L K+ A SA L P+REL QV++ + SL + ++ + +S
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 239 AALRSMPNVVVATPGRMIDHLRNSM---XXXXXXXXXXXXXEADRLLELGFNAEIQELVR 295
AL +P ++V+TP + + EAD LL G+ ++ +
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTS 226
Query: 296 MCPKKRQTMLFSATMTEEVNELIKLSLSKP--LRLSADPSAKRPASLTXXXXXXXXXXXX 353
+ P++ Q +L SAT + +V +L KL L P L L+ D +
Sbjct: 227 IIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQD 286
Query: 354 NPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQ 413
+L + + K++IF T RLK+ +K+A L+G L Q RL LEQ
Sbjct: 287 KLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQ 346
Query: 414 FRKQQVDFLVATD-----------------------------------VAARGLDIMGVQ 438
F D+L+ATD RG+D V
Sbjct: 347 FNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVH 406
Query: 439 TVINFACPRDLTSYVHRVGRTARA 462
TVINF P+ +T Y+HR+GRT RA
Sbjct: 407 TVINFDMPQSVTGYIHRIGRTGRA 430
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 125 FLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILER 184
F N +L A LG+ PTPIQA P+AL GRD+ A TGSGKT A+ LP L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 185 LLFRPK--QMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALR 242
+ +P+ Q L L PTRELAVQ+ + +R I GG Q LR
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 243 SMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQ 302
+V+ATPGR+ID L EADR+L++GF +I+++V RQ
Sbjct: 287 RGVEIVIATPGRLIDML-ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 303 TMLFSATMTEEVNELIKLSLSKPLR-LSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
T+L+SAT EV L + L P + + K S+ N LL
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 362 MCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDF 421
SK++IF TK+ ++ + A +HG+ TQ++R L +F+ +
Sbjct: 406 QLMD--GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 422 LVATDVAARGLDIMGVQ 438
+ ATDVAARGL G++
Sbjct: 464 MTATDVAARGLVSSGIR 480
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 186/392 (47%), Gaps = 22/392 (5%)
Query: 123 DSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPIL 182
++F L LS ++ A Q L PT IQ IP + + + + TGSGKT A+ LPI+
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 183 ERL------LFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKV 236
+ + L + + R + L PTREL+ QV+ + +S++ R L+ GG +
Sbjct: 172 QLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRP 231
Query: 237 QEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEI------ 290
QE +L + ++VV TPGR++ H+ EAD + + GF EI
Sbjct: 232 QEDSLNNAIDMVVGTPGRILQHIEEG-NMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 290
Query: 291 --QELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXX 348
Q ++ + QT+L +ATMT V +L+ L K+ A+
Sbjct: 291 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIAN-ARHDFIKL 349
Query: 349 XXXXXNPEAVLLAM-CSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQR 407
EA+L + S SKV++F T ++ + ++ HG + QR
Sbjct: 350 SGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQR 409
Query: 408 LEALEQFRKQQVD--FLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGRE 465
+E L++F+ ++ D LV TD+AARGLD + V V+ F P++ Y+HR GRTAR G +
Sbjct: 410 VENLKKFKDEEGDCPTLVCTDLAARGLD-LDVDHVVMFDFPKNSIDYLHRTGRTARMGAK 468
Query: 466 GCAVTFVTDNDRSLLKAI--AKRAGSKLKSRT 495
G + V+ D+ L I A R L+S T
Sbjct: 469 GKVTSLVSRKDQMLAARIEEAMRNNESLESLT 500
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 198/427 (46%), Gaps = 72/427 (16%)
Query: 130 LSRPLLRACQALGYIHPTPIQAACI--PLALSG--RDICASAITGSGKTAAFALPILERL 185
L+ L +A + +G P+Q A + G RDIC ++ TGSGKT ++ALPI++ L
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97
Query: 186 LFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMP 245
RP +R + AL + PTR+LA+QV + +++A + VG S + + L P
Sbjct: 98 ASRP--VRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTP 155
Query: 246 ---------------------NVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLEL 284
+++VATPGR++DH+ N+ E DRLL
Sbjct: 156 KLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLRE 215
Query: 285 GFNAEIQELVRMCPK-----------------------KRQT---------------MLF 306
+ + + ++++ +RQ+ M+
Sbjct: 216 AYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVL 275
Query: 307 SATMTEEVNELIKLSLSKPLRLSADPSAKR-PASLTXXXXXXXXXXXXNPEAVLLAMCSK 365
SAT+T++ ++LI+L L PL ++ S R P L L+A+
Sbjct: 276 SATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMK---PVYLVALLKS 332
Query: 366 TFTSKVIIFSGTKQAAHRL-KII--FGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFL 422
K IIF+ + + RL K++ FG ++KA E G L Q+ R + L+ FRK + L
Sbjct: 333 WEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVL 392
Query: 423 VATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKA 482
VA+D RG+D+ GV VIN+ P +++HR GRTARAG+ G T +++++
Sbjct: 393 VASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSK 452
Query: 483 IAKRAGS 489
+ ++ GS
Sbjct: 453 LLEKVGS 459
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 196/431 (45%), Gaps = 37/431 (8%)
Query: 114 PSDGISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGK 173
P D I + A F +S L+A A G + T +Q A + L G+D A TG+GK
Sbjct: 367 PHDSI-YSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGK 425
Query: 174 TAAFALPILERLLFRPKQMRA---------ISALCLTPTRELAVQVHSMMESLAQFTD-I 223
+ AF LP +E +L K M + I L L PTRELA Q+ + ++L + D I
Sbjct: 426 SMAFLLPAIETVL---KAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGI 482
Query: 224 RCCLIVGGLSTKVQEAALRSMP-NVVVATPGRMIDHLRN--SMXXXXXXXXXXXXXEADR 280
++GG ++ + L S P +++ATPGR++DH+ N + EAD
Sbjct: 483 GVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADL 542
Query: 281 LLELGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASL 340
LL+LGF ++++++ P++RQ++LFSAT+ +EV + +L L + D S L
Sbjct: 543 LLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKR------DHSYIDTIGL 596
Query: 341 --TXXXXXXXXXXXXNPEA--------VLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGL 390
P +L + K+I+F T + +
Sbjct: 597 GCVETHDKVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLRE 656
Query: 391 AELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLT 450
+L E+H Q R ++F++ LV +DV+ARG++ V VI P D
Sbjct: 657 MKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDRE 716
Query: 451 SYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAKRAGSKLKSRTVAEQSIHKWSQIIDQ 510
Y+HR+GRT R G+ G + + +R L + + + + + H+ +DQ
Sbjct: 717 QYIHRLGRTGREGKGGKGLLLIAPWERYFLDELKDLPLEPIPAPDLDSRVKHQ----VDQ 772
Query: 511 MEGQIDEVLQE 521
+ID ++E
Sbjct: 773 SMAKIDTSIKE 783
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 164/335 (48%), Gaps = 10/335 (2%)
Query: 162 DICASAITGSGKTAAFALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFT 221
D+ A +G GKTA F L L+++ P Q +SAL L TRELA Q+ + + +
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQ---VSALVLCHTRELAYQICNEFVRFSTYL 58
Query: 222 -DIRCCLIVGGLSTKVQEAALRS-MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEAD 279
D + + GG++ K+ + L++ P++VV TPGR++ R E D
Sbjct: 59 PDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECD 117
Query: 280 RLLE-LGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPA 338
++LE L ++QE+ +M P +Q M+FSAT+++E+ + K + P+ + D AK
Sbjct: 118 KMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK--L 175
Query: 339 SLTXXXXXXXXXXXXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAEL 398
+L L + ++V+IF + A L + + +
Sbjct: 176 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 235
Query: 399 HGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGR 458
H ++Q +RL + F++ LVATD+ RG+DI V VIN+ P +Y+HRVGR
Sbjct: 236 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 295
Query: 459 TARAGREGCAVTFVTD-NDRSLLKAIAKRAGSKLK 492
R G +G A+TFV +D +L + +R +K
Sbjct: 296 AGRFGTKGLAITFVASASDSEVLNQVQERFEVDIK 330
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 169/348 (48%), Gaps = 12/348 (3%)
Query: 153 CIPLALSGRDICASAITGSGKTAAFALPILERLLFR-----PKQMRAISALCLTPTRELA 207
IP AL+G+ + ASA TGSGKTA+F +PI+ R Q R A+ L PTREL
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELC 62
Query: 208 VQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXX 267
VQV + L + + L+VGG Q ++ +++ TPGR++D L +
Sbjct: 63 VQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVD-LLSKHTIEL 121
Query: 268 XXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLR 327
E D +L+ GF ++ ++ + + Q +LFSAT++ EV E + SL+K +
Sbjct: 122 DNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREV-EKVGGSLAKEII 179
Query: 328 LSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRL-KI 386
L + + +P + + F +++ ++ A L
Sbjct: 180 LVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 387 IFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACP 446
I + +KA +HG +R + + F +V LV+T V RG+D++ V+ VI F P
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 447 RDLTSYVHRVGRTARAGREGCAVTFVTDNDRSL---LKAIAKRAGSKL 491
+ Y+H +GR +R G +G A+ FV ++DR+L L A K +G+ +
Sbjct: 300 STIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAI 347
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 184/403 (45%), Gaps = 51/403 (12%)
Query: 122 ADSFLHLNLSRPLLRACQA-LGYIHPTPIQAACIPLALS--GRDICASAITGSGKTAAFA 178
A F LNLS L++ + + P+ IQA +P+ ++ + + A A GSGKT F
Sbjct: 90 ASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFV 149
Query: 179 LPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQE 238
L +L R+ +R ALC+ PTRELA Q +++ + +FT I L V ST+
Sbjct: 150 LGMLSRV---DPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPD-STRGAP 205
Query: 239 AALRSMP---NVVVATPGRM----------IDHLRNSMXXXXXXXXXXXXXEADRLLEL- 284
AA R P +VV+ TPG + ++HL+ EAD +L
Sbjct: 206 AATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLK-----------ILVFDEADHMLATD 254
Query: 285 GFNAE----IQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSADPSAKRPASL 340
GF + ++++ R+ P Q +LFSAT E V + + ++ P +L + +L
Sbjct: 255 GFRDDSLKIMKDIGRVNP-NFQVLLFSATFNETVKDFVARTVKDPNQLFV---KREDLAL 310
Query: 341 TXXXXXXXX--XXXXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAELKAAEL 398
E + + + IIF TK +A ++ +
Sbjct: 311 DSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSV 370
Query: 399 HGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPR-------DLTS 451
HGNLT++ R + +++F++ L+ATDV ARG D V V+N+ P D
Sbjct: 371 HGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEV 430
Query: 452 YVHRVGRTARAGREGCAVTFVTDN--DRSLLKAIAKRAGSKLK 492
Y+HRVGR R GR+G + D+ D+ +++ I K + +K
Sbjct: 431 YLHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVK 473
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 183/423 (43%), Gaps = 56/423 (13%)
Query: 120 FHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFAL 179
F A SF L L LL + + G+ PT +Q+A +P + G D + TGSGKT A+ L
Sbjct: 107 FSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLL 166
Query: 180 PILERLLFRPKQMRA----------ISALCLTPTRELAVQVHSMMESLAQFTDIRCC-LI 228
PIL + ++ R+ I A+ + P+REL +Q+ +E L R +
Sbjct: 167 PILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQL 226
Query: 229 VGGLSTKVQEAAL-RSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFN 287
VGG + QE AL ++ P +VV TPGR I + E D LL F
Sbjct: 227 VGGANRMRQEEALKKNKPAIVVGTPGR-IAEISKGGKLHTHGCRFLVLDEVDELLSFNFR 285
Query: 288 AEIQELVRMCPKK--------------RQTMLFSATMTEEVNELIKLSLSKPLRLSAD-- 331
+I ++ K+ RQT+L SAT+ V K +P+ + A+
Sbjct: 286 EDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKV 345
Query: 332 -------PSAKRPASLTXXXXXXXXXXXXN----PEAVLLAMCSKTFTSKVIIFSGTKQA 380
PSA SLT P A+ C KV A
Sbjct: 346 TPLDTVQPSAP-VMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHA 404
Query: 381 ------------AHRLK-IIFGLAE--LKAAELHGNLTQAQRLEALEQFRKQQVDFLVAT 425
+ +LK +++ L + +AE+HG+L + R L++F+ ++ LV
Sbjct: 405 LDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTN 464
Query: 426 DVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAK 485
+++ARGLD+ V+N P D Y HR GRT R GR+G VT ++ ++K + K
Sbjct: 465 ELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEK 524
Query: 486 RAG 488
+ G
Sbjct: 525 QLG 527
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 179/404 (44%), Gaps = 48/404 (11%)
Query: 120 FHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFAL 179
F +F + S +++A + + P IQA + G+ + +GSGKT A+ +
Sbjct: 371 FSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLV 430
Query: 180 PILERLLFRPKQMRAISA------LCLTPTRELAVQVHSMMESLAQ-FTDIRCCLIVGGL 232
P+++RL Q + S+ + L PT ELA QV + S+++ R ++ GG
Sbjct: 431 PVIQRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGF 490
Query: 233 STKVQEAALRSMPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLL-ELGFNAEIQ 291
+ Q L +V++ATPGR +L N E D L + F A +Q
Sbjct: 491 RQRTQLENLEQGVDVLIATPGRFT-YLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQ 549
Query: 292 ELVRMCPKKRQTMLFSATMTEEV-NELIKL-------------SLSKPLR-----LSADP 332
L+ P Q + +AT+ E+ N+L+++ +S L S D
Sbjct: 550 NLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDD 609
Query: 333 SAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSKTFTSKVIIFSGTKQAAHRLKIIFGLAE 392
+A++ N + LL + + SK IIF + +++ IF +
Sbjct: 610 NAEKTPETAFQ----------NKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVD 659
Query: 393 LKAAELH-----GNLTQAQRLEALEQFRKQQVD----FLVATDVAARGLDIMGVQTVINF 443
K +LH L+Q RL +++F Q + FLV TD A+RG+D GV V+ F
Sbjct: 660 RKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLF 719
Query: 444 ACPRDLTSYVHRVGRTARAGR-EGCAVTFVTDNDRSLLKAIAKR 486
PRD + YV RVGRTAR R +G A FV L + I +R
Sbjct: 720 DFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIER 763
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 153/323 (47%), Gaps = 36/323 (11%)
Query: 130 LSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILE---RLL 186
LS ++ A G+ TP+QA IP S +D+ A TGSGKT AF LP +E R
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 187 FRPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLIVGGLSTKVQEAALRSMPN 246
P + + + ++PTREL+ Q+H + ++ + +C + ++T +E A N
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAV-RLDFAKCREVEADMNTLEEEGA-----N 137
Query: 247 VVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLELGFNAEIQELVRMCPKKRQTMLF 306
+++ TPGR+ D ++ EADRLL++GF ++ ++ PK+R+T LF
Sbjct: 138 LLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLF 197
Query: 307 SATMTEEVNELIKLSLSKP-LRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLAMCSK 365
SAT T+ V +L K L P L+ AD + + L+ + +
Sbjct: 198 SATQTQAVADLAKAGLRNPYLKCEADQKSSQ----------------------LVHLLIE 235
Query: 366 TFTSKVIIFSGTKQAAHRLKIIFG-LAELKAAEL---HGNLTQAQRLEALEQFRKQQVDF 421
K+++F T ++ + LK+ HG + Q R AL F +
Sbjct: 236 NKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGV 295
Query: 422 LVATDVAARGLDIMGVQTVINFA 444
L+ TDVAARGLDI G+ + + A
Sbjct: 296 LLCTDVAARGLDIPGIVYIRSLA 318
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 118 ISFHADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAF 177
+ H+ F L LLRA G+ HP+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 41 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 100
Query: 178 ALPILERLLFRPKQMRAISALCLTPTRELAVQVHSMMESLAQFT-DIRCCLIVGGLSTKV 236
L L+++ P Q +SAL L TRELA Q+ + + + D + + GG++ K+
Sbjct: 101 VLSTLQQIEPSPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKI 157
Query: 237 QEAALRS-MPNVVVATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLLE-LGFNAEIQELV 294
+ L++ P++VV TPGR++ R E D++LE L ++QE+
Sbjct: 158 HKDLLKNECPHIVVGTPGRVLALAREK-DLSLKNVRHFILDECDKMLESLDMRRDVQEIF 216
Query: 295 RMCPKKRQTMLFSATMTEEVNELIK 319
+M P +Q M+FSAT+++E+ + K
Sbjct: 217 KMTPHDKQVMMFSATLSKEIRPVCK 241
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 369 SKVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVA 428
++V+IF + A L + + +H ++Q +RL + F++ LVATD+
Sbjct: 348 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLV 407
Query: 429 ARGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTD-NDRSLLKAIAKRA 487
RG+DI V VIN+ P +Y+HRVGR R G +G A+TFV +D +L + +R
Sbjct: 408 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERF 467
Query: 488 GSKLK 492
+K
Sbjct: 468 EVDIK 472
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 33/376 (8%)
Query: 134 LLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALPILERLLFRPKQMR 193
+L + +G++ PT IQ +P +GRD A TGSGKT + L I L P Q
Sbjct: 87 ILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFS--LINP-QRS 143
Query: 194 AISALCLTPTRELAVQVHSMMESLAQFT--DIRCCLIVG---GLSTKVQEAALRSMPNVV 248
++ A+ + PTREL +QV + LA + D++ C ++ G + + ++ L++ P +
Sbjct: 144 SVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAI 203
Query: 249 VATPGRMIDHLRNSMXXXXXXXXXXXXXEADRLL----ELGFNAEIQELVRMCPKKRQTM 304
+ + H+ E D L ++G ++ C KRQT+
Sbjct: 204 LVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSC-DKRQTV 262
Query: 305 LFSATMTEE---VNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPEAVLLA 361
SA++ + V++ I+ +K + SA P L N VLLA
Sbjct: 263 FASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKT-NKHQVLLA 321
Query: 362 MCSKTFTSKVIIFSG-----TKQAAHRLKIIFGLAELKAAE--------LHGNLTQAQRL 408
+ IIF G +K+A + + LK + L G++ R
Sbjct: 322 LLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRA 381
Query: 409 EALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTAR---AGRE 465
+L + R+ LV+TD+AARG+D+ + NF P+ +T Y+HR GR R + R+
Sbjct: 382 ASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRK 441
Query: 466 GCAVTFVTDNDRSLLK 481
+T +R +L+
Sbjct: 442 CIVANLITSEERFVLQ 457
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 121 HADSFLHLNLSRPLLRACQALGYIHPTPIQAACIPLALSGRDICASAITGSGKTAAFALP 180
H S+ L LS + A + G+ P+ QA CIP LSG+D+ +A TGSGKT + P
Sbjct: 78 HTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAP 137
Query: 181 ILERLLF------------RPKQMRAISALCLTPTRELAVQVHSMMESLAQFTDIRCCLI 228
I+++L RP ++ IS L L P L QV M+ L D L
Sbjct: 138 IIDQLTNTALDSEVTNREERPFPLKNIS-LILCPNVMLCEQVVRMVNGLVD-EDGNPLLR 195
Query: 229 VGGLSTKVQEAALRSMPNVVVATPGRMIDHL---RNSMXXXXXXXXXXXXXEADRLLELG 285
V + + +P+++V+TP +++++ RN EAD LL
Sbjct: 196 VEAVCG--SQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGS 253
Query: 286 FNAEIQELVRMCPKKRQTMLFSATMTEEVNELIKLSLSKPLRLSA 330
F +I L+ M + F ++V+ L K +L +P+ + A
Sbjct: 254 FQNQIIRLINM-------LRFD---EKQVSRLAKSNLGRPMEIDA 288
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 370 KVIIFSGTKQAAHRLKIIFGLAELKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAA 429
+ ++F+ T +A + I A ++ H N +R L FR+ F V TD AA
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETGGVF-VCTDAAA 484
Query: 430 RGLDIMGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAI 483
RG+D+ V VI ++HR+GRTARAG+ G + T+ +R L++AI
Sbjct: 485 RGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEANRDLVEAI 538
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 300 KRQTMLFSATMTEE---VNELIKLSLSKPLRLSADPSAKRPASLTXXXXXXXXXXXXNPE 356
KRQT+ SA++ + V++ I+ +K + SA P L N
Sbjct: 101 KRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKT-NKH 159
Query: 357 AVLLAMCSKTFTSKVIIFSG-----TKQAAHRLKIIFGLAELKAAE--------LHGNLT 403
VLLA+ IIF G +K+A + + LK + L G++
Sbjct: 160 QVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMN 219
Query: 404 QAQRLEALEQFRKQQVDFLVATDVAARGLDIMGVQTVINFACPRDLTSYVHRVGRTAR-- 461
R +L + R+ LV+TD+AARG+D+ + NF P+ +T Y+HR GR R
Sbjct: 220 FNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKP 279
Query: 462 -AGREGCAVTFVTDNDRSLLK 481
+ R+ +T +R +L+
Sbjct: 280 FSDRKCIVANLITSEERFVLQ 300