Miyakogusa Predicted Gene
- Lj0g3v0190239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0190239.1 tr|G7IRH1|G7IRH1_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_2g087710
,83.16,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
Cysteine proteinases,NULL; UCH_2_3,Peptid,CUFF.12090.1
(570 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 687 0.0
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 687 0.0
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 452 e-127
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 423 e-118
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 423 e-118
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 421 e-118
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 399 e-111
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 70 6e-12
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 69 7e-12
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/616 (58%), Positives = 428/616 (69%), Gaps = 56/616 (9%)
Query: 1 MDSASEDCSDNSQRPDPHNNNNDQQVYFVPLRWWKDAQDSMPAADFDKTIGIVYASLPSS 60
M+ S D S +S + N +Q+VYFVPLRWWKDAQDSMP+ +K I+Y + S
Sbjct: 1 MNGTSPDESPDSTTQRIDSFNGEQRVYFVPLRWWKDAQDSMPSESVEKR-EILYTASCGS 59
Query: 61 SYAGPMKIINNIFNSDLVLNFRGEDDSQHISENGEVGVSGRDFALVSGDMWLQALKW--- 117
SY GPMK+INNIFNSD++ + R E D+ E GE VSGRDFALVS DMWLQALK
Sbjct: 60 SYGGPMKLINNIFNSDILFDLRREGDALQNGETGEASVSGRDFALVSSDMWLQALKCIRS 119
Query: 118 ---------------------------HSDSKNATKDDKGFSATDSDMGDVYPLQLRLSI 150
+ D KN K K FSA D GDVYP+QLRLS+
Sbjct: 120 NDSFMEFFVFSASVHSLENEFLKKRLRYHDDKNTEKGVKSFSAGGVDRGDVYPVQLRLSV 179
Query: 151 QTETSSFA--VRISKK----------DNATELFKRACKMFSVDSEMLRIWDFSGQITFYF 198
ET+S A R+S DN+ E F+RACK+FS+DSE LRIWD SGQ T +F
Sbjct: 180 LQETNSLAWSARLSFDKMIKNLNWILDNSVECFRRACKIFSLDSEQLRIWDISGQTTLFF 239
Query: 199 MNGEYQVPIDSQRQSDQEILLELQVYGLSDSMRCRDMKKDEMPNFSSSASLKMNGTADSM 258
+ D Q+Q+DQEILLELQ+YGLSDS++ ++ KK++ ++ + NG + M
Sbjct: 240 -ESDVSNSKDCQQQADQEILLELQIYGLSDSIKLKESKKED------GSTQQTNGITNGM 292
Query: 259 NSDG----SHANSLTISLGPGEAXXXXXXXXXXXXXXCFMNSALQCLTHTPKLVDYFLED 314
N +NSL+ GEA CFMNS+LQCL HTPKLVD+FL +
Sbjct: 293 NGGTVFRFGRSNSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGE 352
Query: 315 YGREINHDNPLGMNGEIALAFGDLLRKLWAPGASPVPPRTFKSKLARFAPQFSGFNQHDS 374
Y +EIN DNPLGM GEIALAFGDLLR LWAPGAS V PRTFK+KLARFAPQFSGFNQHDS
Sbjct: 353 YSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDS 412
Query: 375 QELLAFLLDGLHEDLNRVKCKPYAEAKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQ 434
QELLAFLLDGLHEDLNRVK KPY EAKDGD RPD EVADEYW NH+ARNDS+IVDVCQGQ
Sbjct: 413 QELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQ 472
Query: 435 YKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSSNCDGKSQLLPYTISVPKN 494
YKSTLVCP+C+KVSV FDPFMYLSLPLP T+MRTM LTV+S+ DG S +P T++VPK
Sbjct: 473 YKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSA--DGSSLPIPLTVNVPKF 530
Query: 495 GRFEDLTRALGTACSLGADETLLVAEVYNNCIIRFLEDPSDSLSLIRDADKLVAYRFMKD 554
G+FEDL +AL TACSL +ETLLV EVYNN IIRFLE+P+DSL+LIRD DKLV YR KD
Sbjct: 531 GKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRLKKD 590
Query: 555 NGDAPLVVFINQRMEE 570
++PL+V+++Q++EE
Sbjct: 591 ANNSPLIVYMHQKLEE 606
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/616 (58%), Positives = 428/616 (69%), Gaps = 56/616 (9%)
Query: 1 MDSASEDCSDNSQRPDPHNNNNDQQVYFVPLRWWKDAQDSMPAADFDKTIGIVYASLPSS 60
M+ S D S +S + N +Q+VYFVPLRWWKDAQDSMP+ +K I+Y + S
Sbjct: 1 MNGTSPDESPDSTTQRIDSFNGEQRVYFVPLRWWKDAQDSMPSESVEKR-EILYTASCGS 59
Query: 61 SYAGPMKIINNIFNSDLVLNFRGEDDSQHISENGEVGVSGRDFALVSGDMWLQALKW--- 117
SY GPMK+INNIFNSD++ + R E D+ E GE VSGRDFALVS DMWLQALK
Sbjct: 60 SYGGPMKLINNIFNSDILFDLRREGDALQNGETGEASVSGRDFALVSSDMWLQALKCIRS 119
Query: 118 ---------------------------HSDSKNATKDDKGFSATDSDMGDVYPLQLRLSI 150
+ D KN K K FSA D GDVYP+QLRLS+
Sbjct: 120 NDSFMEFFVFSASVHSLENEFLKKRLRYHDDKNTEKGVKSFSAGGVDRGDVYPVQLRLSV 179
Query: 151 QTETSSFA--VRISKK----------DNATELFKRACKMFSVDSEMLRIWDFSGQITFYF 198
ET+S A R+S DN+ E F+RACK+FS+DSE LRIWD SGQ T +F
Sbjct: 180 LQETNSLAWSARLSFDKMIKNLNWILDNSVECFRRACKIFSLDSEQLRIWDISGQTTLFF 239
Query: 199 MNGEYQVPIDSQRQSDQEILLELQVYGLSDSMRCRDMKKDEMPNFSSSASLKMNGTADSM 258
+ D Q+Q+DQEILLELQ+YGLSDS++ ++ KK++ ++ + NG + M
Sbjct: 240 -ESDVSNSKDCQQQADQEILLELQIYGLSDSIKLKESKKED------GSTQQTNGITNGM 292
Query: 259 NSDG----SHANSLTISLGPGEAXXXXXXXXXXXXXXCFMNSALQCLTHTPKLVDYFLED 314
N +NSL+ GEA CFMNS+LQCL HTPKLVD+FL +
Sbjct: 293 NGGTVFRFGRSNSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGE 352
Query: 315 YGREINHDNPLGMNGEIALAFGDLLRKLWAPGASPVPPRTFKSKLARFAPQFSGFNQHDS 374
Y +EIN DNPLGM GEIALAFGDLLR LWAPGAS V PRTFK+KLARFAPQFSGFNQHDS
Sbjct: 353 YSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDS 412
Query: 375 QELLAFLLDGLHEDLNRVKCKPYAEAKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQ 434
QELLAFLLDGLHEDLNRVK KPY EAKDGD RPD EVADEYW NH+ARNDS+IVDVCQGQ
Sbjct: 413 QELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQ 472
Query: 435 YKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSSNCDGKSQLLPYTISVPKN 494
YKSTLVCP+C+KVSV FDPFMYLSLPLP T+MRTM LTV+S+ DG S +P T++VPK
Sbjct: 473 YKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSA--DGSSLPIPLTVNVPKF 530
Query: 495 GRFEDLTRALGTACSLGADETLLVAEVYNNCIIRFLEDPSDSLSLIRDADKLVAYRFMKD 554
G+FEDL +AL TACSL +ETLLV EVYNN IIRFLE+P+DSL+LIRD DKLV YR KD
Sbjct: 531 GKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRLKKD 590
Query: 555 NGDAPLVVFINQRMEE 570
++PL+V+++Q++EE
Sbjct: 591 ANNSPLIVYMHQKLEE 606
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/563 (45%), Positives = 335/563 (59%), Gaps = 39/563 (6%)
Query: 19 NNNNDQQVYFVPLRWWKD----AQDSMPAADFDKTIGIVYASLPSSSYAGPMKIINNIFN 74
N+ Y + RWW++ P D + + P SS +K + I N
Sbjct: 34 NSKEGDTFYLITQRWWQEWIEYVNQDQPCNTNDGSSLSEHCDSPGSS---TLKKPSRIDN 90
Query: 75 SDLVLNFRGEDDSQHISENGEVGVSGRDFALVSGDMWLQALKWHSDSKNATKD--DKGFS 132
SDL+ + ED S + SE E GRD+ L+ ++W Q W+ + G S
Sbjct: 91 SDLIYDSSLEDPS-NTSEIIETLQEGRDYVLLPQEVWNQLRSWYGGGPTLARRVISSGLS 149
Query: 133 ATDSDMGDVYPLQLRLSIQTETSSFAVRISKKDNATELFKRACKMFSVDSEMLRIWDFSG 192
T+ + +VYPL+L+L + ++ A+RISKK+ EL +RAC++F +DSE +RIWD+ G
Sbjct: 150 QTELAV-EVYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYG 208
Query: 193 QITFYFMNGEYQVPIDSQRQSDQEILLE-LQVYGLSDSMRCRDMKKDEMPN--------- 242
+ MN + D+ Q DQ+IL+E L + G S + +++ + +
Sbjct: 209 HQKYSLMNDLDKTLDDANLQMDQDILVEVLDINGTLSSAHIQSAQENGLVDGDSTSILIE 268
Query: 243 -----------FSSSASLKMNGTAD-SMNSDGSHANSLTISLGPGEAXXXXXXXXXXXXX 290
FSSS + G+ + S + D +++++ + G
Sbjct: 269 PSKSSLAAAGGFSSSRNAFRTGSVEVSQSFDNTYSSTGVTTRG----STAGLTGLLNLGN 324
Query: 291 XCFMNSALQCLTHTPKLVDYFLEDYGREINHDNPLGMNGEIALAFGDLLRKLWAPGASPV 350
CFMNSA+QCL HTP+ YF EDY +EIN NPLGM GE+ALAFGDLLRKLWAPG +P+
Sbjct: 325 TCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLRKLWAPGRTPI 384
Query: 351 PPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYAEAKDGDDRPDEE 410
PR FK+KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY ++D D RPDEE
Sbjct: 385 APRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYINSRDADGRPDEE 444
Query: 411 VADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTMRTMT 470
VADE+W NH+ARNDS+IVDVCQGQYKSTLVCP+C KVSVTFDPFMYLSLPL T R +T
Sbjct: 445 VADEFWKNHIARNDSIIVDVCQGQYKSTLVCPICNKVSVTFDPFMYLSLPLQFNTTRAIT 504
Query: 471 LTVVSSNCDGKSQLLPYTISVPKNGRFEDLTRALGTACSLGADETLLVAEVYNNCIIRFL 530
+TV S CD + T++V K GR DL +AL ACSL E L +AE+ NN I R
Sbjct: 505 VTVFS--CDKTALPSTITVNVSKQGRCRDLIQALTNACSLKQSEELKLAEIRNNFIHRLF 562
Query: 531 EDPSDSLSLIRDADKLVAYRFMK 553
EDP LS I+D D L AY+ K
Sbjct: 563 EDPLIPLSSIKDDDHLAAYKLSK 585
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/486 (48%), Positives = 310/486 (63%), Gaps = 32/486 (6%)
Query: 102 DFALVSGDMWLQALKWHSDSKNATKD--DKGFSATDSDMGDVYPLQLRLSIQTETSSFAV 159
D+ LV ++W + ++W+S + +GF T S +VYPL L L+ + S +
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGF-YTRSYSVEVYPLCLMLTDGRDESRTVI 165
Query: 160 RISKKDNATELFKRACKMFSVDSEMLRIWDFSGQITFYFMNG-EYQVPIDSQRQSDQEIL 218
R+ K+ + EL+++ C + V E IWD+ + ++ Y+ +S DQ+IL
Sbjct: 166 RLGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDIL 225
Query: 219 LELQVYGLSDSMRCRDMKKDEM---PNFSSSASLKM-------NGTADSMN--------S 260
LE+ G S S +E+ P S +S+ + NG + + N S
Sbjct: 226 LEVD--GSSSSQSAMSSTGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFPRITS 283
Query: 261 DGSHANSLTISLGPGEAXXXXXXXXXXXXXXCFMNSALQCLTHTPKLVDYFLEDYGREIN 320
+ +NSL+I LG GE CFMNSALQCL HTP +V+YFL+DY +IN
Sbjct: 284 EDDGSNSLSI-LGKGEKGGLAGLSNLGNT--CFMNSALQCLAHTPPIVEYFLQDYSDDIN 340
Query: 321 HDNPLGMNGEIALAFGDLLRKLWAPGASPVPPRTFKSKLARFAPQFSGFNQHDSQELLAF 380
DNPLGM GE+A+AFGDLL+KLW+ G + V PR FK+KLARFAPQFSG+NQHDSQELLAF
Sbjct: 341 RDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAF 400
Query: 381 LLDGLHEDLNRVKCKPYAEAKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLV 440
LLDGLHEDLN+VK KPY E KD D RPD+EVA+E W+ H ARNDSVIVDVCQGQYKSTLV
Sbjct: 401 LLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLV 460
Query: 441 CPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSSNCDGKSQLLPYTISVPKNGRFEDL 500
CP C K+S+TFDPFMYLS+PLPST R+MT+TV CDG +PYT+ VPKNG DL
Sbjct: 461 CPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFY--CDGSHLPMPYTVIVPKNGSIRDL 518
Query: 501 TRALGTACSLGADETLLVAEVYNNCIIRFLEDPSDSLSLIRDADKLVAYRFM---KDNGD 557
ALGTAC L DE+LL+AEVY++ I ++ E+P DSLS I+D + +VAYR K +G
Sbjct: 519 ITALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGK 578
Query: 558 APLVVF 563
A L +
Sbjct: 579 AKLEIL 584
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/486 (48%), Positives = 310/486 (63%), Gaps = 32/486 (6%)
Query: 102 DFALVSGDMWLQALKWHSDSKNATKD--DKGFSATDSDMGDVYPLQLRLSIQTETSSFAV 159
D+ LV ++W + ++W+S + +GF T S +VYPL L L+ + S +
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGF-YTRSYSVEVYPLCLMLTDGRDESRTVI 165
Query: 160 RISKKDNATELFKRACKMFSVDSEMLRIWDFSGQITFYFMNG-EYQVPIDSQRQSDQEIL 218
R+ K+ + EL+++ C + V E IWD+ + ++ Y+ +S DQ+IL
Sbjct: 166 RLGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDIL 225
Query: 219 LELQVYGLSDSMRCRDMKKDEM---PNFSSSASLKM-------NGTADSMN--------S 260
LE+ G S S +E+ P S +S+ + NG + + N S
Sbjct: 226 LEVD--GSSSSQSAMSSTGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFPRITS 283
Query: 261 DGSHANSLTISLGPGEAXXXXXXXXXXXXXXCFMNSALQCLTHTPKLVDYFLEDYGREIN 320
+ +NSL+I LG GE CFMNSALQCL HTP +V+YFL+DY +IN
Sbjct: 284 EDDGSNSLSI-LGKGEKGGLAGLSNLGNT--CFMNSALQCLAHTPPIVEYFLQDYSDDIN 340
Query: 321 HDNPLGMNGEIALAFGDLLRKLWAPGASPVPPRTFKSKLARFAPQFSGFNQHDSQELLAF 380
DNPLGM GE+A+AFGDLL+KLW+ G + V PR FK+KLARFAPQFSG+NQHDSQELLAF
Sbjct: 341 RDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAF 400
Query: 381 LLDGLHEDLNRVKCKPYAEAKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLV 440
LLDGLHEDLN+VK KPY E KD D RPD+EVA+E W+ H ARNDSVIVDVCQGQYKSTLV
Sbjct: 401 LLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLV 460
Query: 441 CPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSSNCDGKSQLLPYTISVPKNGRFEDL 500
CP C K+S+TFDPFMYLS+PLPST R+MT+TV CDG +PYT+ VPKNG DL
Sbjct: 461 CPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFY--CDGSHLPMPYTVIVPKNGSIRDL 518
Query: 501 TRALGTACSLGADETLLVAEVYNNCIIRFLEDPSDSLSLIRDADKLVAYRFM---KDNGD 557
ALGTAC L DE+LL+AEVY++ I ++ E+P DSLS I+D + +VAYR K +G
Sbjct: 519 ITALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGK 578
Query: 558 APLVVF 563
A L +
Sbjct: 579 AKLEIL 584
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/473 (48%), Positives = 294/473 (62%), Gaps = 24/473 (5%)
Query: 98 VSGRDFALVSGDMWLQALKWHSDSKNATKD--DKGFSATDSDMGDVYPLQLRLSIQTETS 155
V G D+ LV +W + ++W+S + +GF T S +VYPL L L+ + S
Sbjct: 103 VEGEDYVLVPKQVWKRLVEWYSGGPPIERKLICQGF-YTRSYSVEVYPLCLMLTDGRDES 161
Query: 156 SFAVRISKKDNATELFKRACKMFSVDSEMLRIWDFSGQITFYFMNG-EYQVPIDSQRQSD 214
+R+ K+ + EL+++ C M V E IWD+ + ++ Y+ +S D
Sbjct: 162 RTVIRLGKQASIRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMD 221
Query: 215 QEILLELQVYGLSDSMRCRDMKK-DEMPNFSSSASLKMNGTADSMNSDGSHANSLTISLG 273
Q+IL+E V GLS S + +E+ S + A H+ + SL
Sbjct: 222 QDILVE--VDGLSSSSQSAMSSTGNELALVPLEPSRSIVTIAGGPTLSNGHSTTSNFSLF 279
Query: 274 P---------------GEAXXXXXXXXXXXXXXCFMNSALQCLTHTPKLVDYFLEDYGRE 318
P G+ CFMNSALQCL HTP +V+YFL+DY +
Sbjct: 280 PRITSEDDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDD 339
Query: 319 INHDNPLGMNGEIALAFGDLLRKLWAPGASPVPPRTFKSKLARFAPQFSGFNQHDSQELL 378
IN DNPLGM GE+A+AFGDLL+KLW+ G + V PR FK+KLARFAPQFSG+NQHDSQELL
Sbjct: 340 INRDNPLGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELL 399
Query: 379 AFLLDGLHEDLNRVKCKPYAEAKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQYKST 438
AFLLDGLHEDLN+VK KPY E KD D RPD+EVA+E W+ H ARNDSVIVDVCQGQYKST
Sbjct: 400 AFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKST 459
Query: 439 LVCPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSSNCDGKSQLLPYTISVPKNGRFE 498
LVCPVC K+S+TFDPFMYLS+PLPST R+MT+TV CDG +PYT+ VPK G
Sbjct: 460 LVCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFY--CDGSRLPMPYTVIVPKQGSIR 517
Query: 499 DLTRALGTACSLGADETLLVAEVYNNCIIRFLEDPSDSLSLIRDADKLVAYRF 551
DL ALGTAC L DE+LL+AEVY++ I R+ E P DSLS I+D + +VAYR
Sbjct: 518 DLITALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRL 570
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/471 (46%), Positives = 297/471 (63%), Gaps = 25/471 (5%)
Query: 100 GRDFALVSGDMWLQALKWHSDSKNATKD--DKGFSATDSDMGDVYPLQLRLSIQTETSSF 157
G D+ LV ++W + +KW+ + +GF T S +VY L L L+ + S+
Sbjct: 103 GVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGF-YTKSFSVEVYLLCLTLTDSRDESTT 161
Query: 158 AVRISKKDNATELFKRACKMFSVDSEMLRIWDFSGQITFYFMNGEYQVPID-SQRQSDQE 216
+R+SK+ + +L++ C V E RIWD+ + ++ + ++ + Q +Q+
Sbjct: 162 IIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQFNQD 221
Query: 217 ILLELQ-------VYGLSDS----MRCRDMKKDEMPNFSSSASLKMNGTADSMNSDGSHA 265
ILLE+ V L+++ + M+ D M +L NG ++
Sbjct: 222 ILLEVDGSASSQFVMSLAENELAMVPLEPMRSDAMDIVRGGGTLS-NGHSNGFKFSFFGR 280
Query: 266 NSL-----TISLGPGEAXXXXXXXXXXXXXXCFMNSALQCLTHTPKLVDYFLEDYGREIN 320
N+ + + G GE CFMNS LQCL HTP +V+YFL+DY +IN
Sbjct: 281 NTFKDDVSSRTFGKGEKRGLGGLQNLGNT--CFMNSTLQCLAHTPPIVEYFLQDYRSDIN 338
Query: 321 HDNPLGMNGEIALAFGDLLRKLWAPGASPVPPRTFKSKLARFAPQFSGFNQHDSQELLAF 380
NPLGM GE+A+AFG+LLRKLW+ G + V PR FK+KLARFAPQFSG+NQHDSQE+LAF
Sbjct: 339 AKNPLGMRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAF 398
Query: 381 LLDGLHEDLNRVKCKPYAEAKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLV 440
LLDGLHEDLN+VK KPY EAKD D RPD+EVA+E W H ARNDSVIVDV QGQYKSTLV
Sbjct: 399 LLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLV 458
Query: 441 CPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSSNCDGKSQLLPYTISVPKNGRFEDL 500
CP C K+S+TFDPFMYLSLPLPS+ R+MT+TV DG +PYT++VPK+G DL
Sbjct: 459 CPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYG--DGSHLPMPYTVTVPKDGSCRDL 516
Query: 501 TRALGTACSLGADETLLVAEVYNNCIIRFLEDPSDSLSLIRDADKLVAYRF 551
+ ALGTAC L DE+LL+AEVY++ + ++ E+P + L+ I+D + +VAYRF
Sbjct: 517 SNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIVAYRF 567
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1
| chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 292 CFMNSALQCLTHTPKLVDYFLEDYGREINHDNPLGMNGEIALAFGDLLRKLWAPGA---S 348
CF NS +Q L +L ++FL++ L ++G + + +L + + + +
Sbjct: 211 CFFNSVMQNLLSLDQLREHFLKE---------DLSVSGPLVSSLKELFAESNSEASVFRN 261
Query: 349 PVPPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYAEAKDGDDRPD 408
+ PR + APQF G+ QHDS ELL LLDGL + + ++ K D +D
Sbjct: 262 EINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLRKK--LGVSDSND--- 316
Query: 409 EEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTMRT 468
+ + ++I V G+ ST+ C C S ++PFM LSLP+PS +
Sbjct: 317 ---------SSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPVPSMKLPP 367
Query: 469 MTLTVVSSNCDGKSQLLPYTISVPKNG 495
K Q+L V KNG
Sbjct: 368 K-----------KQQILSQAKEVLKNG 383
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 95/209 (45%), Gaps = 40/209 (19%)
Query: 292 CFMNSALQCLTHTPKLVDYFLEDYGREINHDNPLGMNGEIALAFGDLLRKLWA---PGA- 347
CF NS +Q L +L D+FL++ G G+ G +A + LRKL+ P A
Sbjct: 240 CFFNSIMQNLLSLDRLRDHFLKENGS--------GVGGPLASS----LRKLFTETKPEAG 287
Query: 348 --SPVPPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYAEAKDGDD 405
S + PR F APQF G++QHDS ELL LLD L + + ++ K G
Sbjct: 288 LKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALR------KKRGVS 341
Query: 406 RPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLPSTT 465
DE ++ ++I V G+ S + C C S ++PF+ LSLP+P
Sbjct: 342 DNDE------------KSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSLPVPFKK 389
Query: 466 MRTMTLTVVSSNCDGKSQLLPYTISVPKN 494
VS K++L P VPKN
Sbjct: 390 SPPKKPQPVSRA--KKAKLPPKR--VPKN 414