Miyakogusa Predicted Gene

Lj0g3v0190199.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190199.1 Non Chatacterized Hit- tr|I1M181|I1M181_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.46,0,ADOMETDC,S-adenosylmethionine decarboxylase, conserved
site; SAM_decarbox,S-adenosylmethionine decar,CUFF.12064.1
         (265 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18930.1 | Symbols: BUD2, SAMDC4 | Adenosylmethionine decarbo...   329   1e-90
AT3G02470.4 | Symbols:  | S-adenosylmethionine decarboxylase | c...   221   3e-58
AT3G02470.3 | Symbols: SAMDC | S-adenosylmethionine decarboxylas...   221   3e-58
AT3G02470.1 | Symbols: SAMDC | S-adenosylmethionine decarboxylas...   221   3e-58
AT3G25570.2 | Symbols:  | Adenosylmethionine decarboxylase famil...   220   7e-58
AT3G25570.1 | Symbols:  | Adenosylmethionine decarboxylase famil...   220   7e-58
AT5G15950.2 | Symbols:  | Adenosylmethionine decarboxylase famil...   216   1e-56
AT5G15950.1 | Symbols:  | Adenosylmethionine decarboxylase famil...   216   1e-56

>AT5G18930.1 | Symbols: BUD2, SAMDC4 | Adenosylmethionine
           decarboxylase family protein | chr5:6312172-6313215
           REVERSE LENGTH=347
          Length = 347

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 170/269 (63%), Positives = 200/269 (74%), Gaps = 9/269 (3%)

Query: 1   MAHSGFEGYEKRLELHFFGDDPTILQ--MGLRKLDFECMIQPTLEAVQCTVVSAVGNSYF 58
           MA SGFEG+EKRLEL FF DD  I +  MGLR +DFE + Q  L  VQCTVVSAV N  F
Sbjct: 1   MAVSGFEGFEKRLELRFFDDDKPITKNPMGLRLIDFESLDQ-VLNEVQCTVVSAVANRSF 59

Query: 59  DAYVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIFPE 118
           DAYVLSESSLFVYPTKIIIKTCGTTQLLKSI PLI  A  +LGLTL +CRY+RGSFIFP+
Sbjct: 60  DAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLIHLAR-NLGLTLRACRYSRGSFIFPK 118

Query: 119 SQPFPHTSFEEEVTYLENTIPENLSLRKASIM-PSKSSSHSWHVFTATNNPPLFHYESHP 177
           +QPFP+TSF++EV  +E ++P++L  RKAS+M PS + S +WHVFTA+ +      + H 
Sbjct: 119 AQPFPYTSFKDEVIVVEESLPKSLCYRKASVMTPSNNPSRAWHVFTASAD---VESDEHV 175

Query: 178 YTMEICMTDLDPTLARKFFQRPXXXXXXXXXX-XXMTELSGINEINRNALICDFAFDPCG 236
             +E+CMT+LD   AR FF+R              MT LSGI+ IN NA ICDFAFDPCG
Sbjct: 176 VVVEVCMTELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCG 235

Query: 237 YSMNSMDEDWYSTIHVTPEDGYSYASFEC 265
           YSMN +D D YSTIHVTPEDG+SYASFEC
Sbjct: 236 YSMNGVDGDRYSTIHVTPEDGFSYASFEC 264


>AT3G02470.4 | Symbols:  | S-adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD LENGTH=366
          Length = 366

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/264 (47%), Positives = 165/264 (62%), Gaps = 15/264 (5%)

Query: 5   GFEGYEKRLELHFFGDDPTILQ----MGLRKLDFECMIQPTLEAVQCTVVSAVGNSYFDA 60
           GFEGYEKRLE+ FF  +P+I Q    +GLR L  +  +   L    CT+VS++ N   D+
Sbjct: 7   GFEGYEKRLEVTFF--EPSIFQDSKGLGLRALT-KSQLDEILTPAACTIVSSLSNDQLDS 63

Query: 61  YVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIFPESQ 120
           YVLSESS FVYP K+IIKTCGTT+LL SI PL+  A   L L++ S +YTRGSF+ P  Q
Sbjct: 64  YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAG-ELSLSVKSVKYTRGSFLCPGGQ 122

Query: 121 PFPHTSFEEEVTYLENTIPENLSLRKASIMPSKSSSHSWHVFTATNNPPLFHYESHPYTM 180
           PFPH SF EEV+ L+    +      A +M +   +  WHV+ A+      +  ++ YT+
Sbjct: 123 PFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSS-NCNNNVYTL 181

Query: 181 EICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSMN 240
           E+CMT LD   A  F++              MT+ SGI +I   + ICDF F+PCGYSMN
Sbjct: 182 EMCMTGLDREKAAVFYKDEADKTGS------MTDNSGIRKILPKSEICDFEFEPCGYSMN 235

Query: 241 SMDEDWYSTIHVTPEDGYSYASFE 264
           S++ D  STIHVTPEDG+SYASFE
Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFE 259


>AT3G02470.3 | Symbols: SAMDC | S-adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD LENGTH=366
          Length = 366

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/264 (47%), Positives = 165/264 (62%), Gaps = 15/264 (5%)

Query: 5   GFEGYEKRLELHFFGDDPTILQ----MGLRKLDFECMIQPTLEAVQCTVVSAVGNSYFDA 60
           GFEGYEKRLE+ FF  +P+I Q    +GLR L  +  +   L    CT+VS++ N   D+
Sbjct: 7   GFEGYEKRLEVTFF--EPSIFQDSKGLGLRALT-KSQLDEILTPAACTIVSSLSNDQLDS 63

Query: 61  YVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIFPESQ 120
           YVLSESS FVYP K+IIKTCGTT+LL SI PL+  A   L L++ S +YTRGSF+ P  Q
Sbjct: 64  YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAG-ELSLSVKSVKYTRGSFLCPGGQ 122

Query: 121 PFPHTSFEEEVTYLENTIPENLSLRKASIMPSKSSSHSWHVFTATNNPPLFHYESHPYTM 180
           PFPH SF EEV+ L+    +      A +M +   +  WHV+ A+      +  ++ YT+
Sbjct: 123 PFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSS-NCNNNVYTL 181

Query: 181 EICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSMN 240
           E+CMT LD   A  F++              MT+ SGI +I   + ICDF F+PCGYSMN
Sbjct: 182 EMCMTGLDREKAAVFYKDEADKTGS------MTDNSGIRKILPKSEICDFEFEPCGYSMN 235

Query: 241 SMDEDWYSTIHVTPEDGYSYASFE 264
           S++ D  STIHVTPEDG+SYASFE
Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFE 259


>AT3G02470.1 | Symbols: SAMDC | S-adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD LENGTH=366
          Length = 366

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/264 (47%), Positives = 165/264 (62%), Gaps = 15/264 (5%)

Query: 5   GFEGYEKRLELHFFGDDPTILQ----MGLRKLDFECMIQPTLEAVQCTVVSAVGNSYFDA 60
           GFEGYEKRLE+ FF  +P+I Q    +GLR L  +  +   L    CT+VS++ N   D+
Sbjct: 7   GFEGYEKRLEVTFF--EPSIFQDSKGLGLRALT-KSQLDEILTPAACTIVSSLSNDQLDS 63

Query: 61  YVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIFPESQ 120
           YVLSESS FVYP K+IIKTCGTT+LL SI PL+  A   L L++ S +YTRGSF+ P  Q
Sbjct: 64  YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAG-ELSLSVKSVKYTRGSFLCPGGQ 122

Query: 121 PFPHTSFEEEVTYLENTIPENLSLRKASIMPSKSSSHSWHVFTATNNPPLFHYESHPYTM 180
           PFPH SF EEV+ L+    +      A +M +   +  WHV+ A+      +  ++ YT+
Sbjct: 123 PFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSS-NCNNNVYTL 181

Query: 181 EICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSMN 240
           E+CMT LD   A  F++              MT+ SGI +I   + ICDF F+PCGYSMN
Sbjct: 182 EMCMTGLDREKAAVFYKDEADKTGS------MTDNSGIRKILPKSEICDFEFEPCGYSMN 235

Query: 241 SMDEDWYSTIHVTPEDGYSYASFE 264
           S++ D  STIHVTPEDG+SYASFE
Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFE 259


>AT3G25570.2 | Symbols:  | Adenosylmethionine decarboxylase family
           protein | chr3:9287413-9288462 REVERSE LENGTH=349
          Length = 349

 Score =  220 bits (561), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/267 (48%), Positives = 167/267 (62%), Gaps = 11/267 (4%)

Query: 1   MAHSGFEGYEKRLELHFFGDDPTILQMG--LRKLDFECMIQPTLEAVQCTVVSAVGNSYF 58
           ++ +GFEG+EKRLE+ FF     +   G  LR L  +  +   L   +CT+VS++ NS+ 
Sbjct: 3   VSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLT-KSQLDEILTPAECTIVSSLTNSFV 61

Query: 59  DAYVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIFPE 118
           D+YVLSESSLFVYP KIIIKTCGTT+LL SI P I      L LT+ S RYTRGSFIFP 
Sbjct: 62  DSYVLSESSLFVYPYKIIIKTCGTTKLLLSI-PHILRLADSLCLTVKSVRYTRGSFIFPG 120

Query: 119 SQPFPHTSFEEEVTYLENTIPENLSLRKASIMP-SKSSSHSWHVFTATNNPPLFHYESHP 177
           +Q +PH SF EEV  L++   +  +  KA +M  S ++   WHV++A++       +   
Sbjct: 121 AQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPV 180

Query: 178 YTMEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGY 237
           YT+E+CMT LD   A  FF+              MT  SGI  I   + ICDF F+PCGY
Sbjct: 181 YTLEMCMTGLDNIKASVFFK------TNSVSASEMTISSGIRNILPGSEICDFNFEPCGY 234

Query: 238 SMNSMDEDWYSTIHVTPEDGYSYASFE 264
           SMNS++ D  STIHVTPEDG+SYASFE
Sbjct: 235 SMNSIEGDAVSTIHVTPEDGFSYASFE 261


>AT3G25570.1 | Symbols:  | Adenosylmethionine decarboxylase family
           protein | chr3:9287413-9288462 REVERSE LENGTH=349
          Length = 349

 Score =  220 bits (561), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/267 (48%), Positives = 167/267 (62%), Gaps = 11/267 (4%)

Query: 1   MAHSGFEGYEKRLELHFFGDDPTILQMG--LRKLDFECMIQPTLEAVQCTVVSAVGNSYF 58
           ++ +GFEG+EKRLE+ FF     +   G  LR L  +  +   L   +CT+VS++ NS+ 
Sbjct: 3   VSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLT-KSQLDEILTPAECTIVSSLTNSFV 61

Query: 59  DAYVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIFPE 118
           D+YVLSESSLFVYP KIIIKTCGTT+LL SI P I      L LT+ S RYTRGSFIFP 
Sbjct: 62  DSYVLSESSLFVYPYKIIIKTCGTTKLLLSI-PHILRLADSLCLTVKSVRYTRGSFIFPG 120

Query: 119 SQPFPHTSFEEEVTYLENTIPENLSLRKASIMP-SKSSSHSWHVFTATNNPPLFHYESHP 177
           +Q +PH SF EEV  L++   +  +  KA +M  S ++   WHV++A++       +   
Sbjct: 121 AQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPV 180

Query: 178 YTMEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGY 237
           YT+E+CMT LD   A  FF+              MT  SGI  I   + ICDF F+PCGY
Sbjct: 181 YTLEMCMTGLDNIKASVFFK------TNSVSASEMTISSGIRNILPGSEICDFNFEPCGY 234

Query: 238 SMNSMDEDWYSTIHVTPEDGYSYASFE 264
           SMNS++ D  STIHVTPEDG+SYASFE
Sbjct: 235 SMNSIEGDAVSTIHVTPEDGFSYASFE 261


>AT5G15950.2 | Symbols:  | Adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD LENGTH=362
          Length = 362

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/268 (46%), Positives = 169/268 (63%), Gaps = 16/268 (5%)

Query: 1   MAHSGFEGYEKRLELHFFGDDPTIL----QMGLRKLDFECMIQPTLEAVQCTVVSAVGNS 56
           M+  GFEGYEKRLE+ FF  +P +       GLR L  +  I   L+  +CT+VS++ N 
Sbjct: 3   MSAIGFEGYEKRLEVTFF--EPGLFLDTQGKGLRAL-AKSQIDEILQPAECTIVSSLSND 59

Query: 57  YFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIF 116
             D+YVLSESSLF++P KI+IKTCGTT+LL SI PL+  A   L L + + RYTRGSF+ 
Sbjct: 60  QLDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAG-ELSLDVKAVRYTRGSFLC 118

Query: 117 PESQPFPHTSFEEEVTYLENTIPENLSLRKASIMPSKSSSHSWHVFTATNNPPLFHYESH 176
           P  QPFPH +F EEV+ L+    +      A +M +   +  WHV++A++     + +++
Sbjct: 119 PGGQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANS--NNKNN 176

Query: 177 PYTMEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCG 236
            YT+E+CMT LD   A  F++              MT+ SGI +I   + ICDF F+PCG
Sbjct: 177 VYTLEMCMTGLDKDKASVFYKNESSSAGS------MTDNSGIRKILPQSQICDFEFEPCG 230

Query: 237 YSMNSMDEDWYSTIHVTPEDGYSYASFE 264
           YSMNS++ D  STIHVTPEDG+SYASFE
Sbjct: 231 YSMNSIEGDAISTIHVTPEDGFSYASFE 258


>AT5G15950.1 | Symbols:  | Adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD LENGTH=362
          Length = 362

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/268 (46%), Positives = 169/268 (63%), Gaps = 16/268 (5%)

Query: 1   MAHSGFEGYEKRLELHFFGDDPTIL----QMGLRKLDFECMIQPTLEAVQCTVVSAVGNS 56
           M+  GFEGYEKRLE+ FF  +P +       GLR L  +  I   L+  +CT+VS++ N 
Sbjct: 3   MSAIGFEGYEKRLEVTFF--EPGLFLDTQGKGLRAL-AKSQIDEILQPAECTIVSSLSND 59

Query: 57  YFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSITPLIFYAHTHLGLTLCSCRYTRGSFIF 116
             D+YVLSESSLF++P KI+IKTCGTT+LL SI PL+  A   L L + + RYTRGSF+ 
Sbjct: 60  QLDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAG-ELSLDVKAVRYTRGSFLC 118

Query: 117 PESQPFPHTSFEEEVTYLENTIPENLSLRKASIMPSKSSSHSWHVFTATNNPPLFHYESH 176
           P  QPFPH +F EEV+ L+    +      A +M +   +  WHV++A++     + +++
Sbjct: 119 PGGQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANS--NNKNN 176

Query: 177 PYTMEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCG 236
            YT+E+CMT LD   A  F++              MT+ SGI +I   + ICDF F+PCG
Sbjct: 177 VYTLEMCMTGLDKDKASVFYKNESSSAGS------MTDNSGIRKILPQSQICDFEFEPCG 230

Query: 237 YSMNSMDEDWYSTIHVTPEDGYSYASFE 264
           YSMNS++ D  STIHVTPEDG+SYASFE
Sbjct: 231 YSMNSIEGDAISTIHVTPEDGFSYASFE 258