Miyakogusa Predicted Gene

Lj0g3v0189609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0189609.1 Non Chatacterized Hit- tr|I1N1Q8|I1N1Q8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,87.36,0,no
description,Ribonuclease II/R; RNB,Ribonuclease II/R; RIBONUCLEASE
II,NULL; RIBONUCLEASE,NULL,CUFF.12049.1
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease...   513   e-145
AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein ...    69   5e-12
AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein ...    69   5e-12

>AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease
           II/R family protein | chr5:454902-459063 FORWARD
           LENGTH=803
          Length = 803

 Score =  513 bits (1320), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/347 (75%), Positives = 303/347 (87%), Gaps = 1/347 (0%)

Query: 2   RRGTSVFLPTATYSMFPEKLAMEAMSLRQGEICNAVTVSVVLHKDGSIAECSVLNSLIKP 61
           RRGTSVFLPTATY MFPEKLAME MSLRQGE CNAV+VSVVL  DG I E SV NS+I+P
Sbjct: 457 RRGTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNSIIRP 516

Query: 62  TYMLTYESASELLHLNLKEEVELRILSEAATLRLNWRRQQGAVETASLETRIKVSNPEDA 121
           TYMLTYESASELLHLNL+EE EL++LSEAA +R  WRR+QGAV+T +LETRIKV NPED 
Sbjct: 517 TYMLTYESASELLHLNLEEEAELKLLSEAAFIRSQWRREQGAVDTTTLETRIKVVNPEDP 576

Query: 122 EPSINLYVESQADPAMRLVSEMMILCGEAMATFGSRNEIPLPYRGQPQSDINLSEFSHLP 181
           EP INLYVE+QAD AMRLV EMMILCGE +ATFGS++ IPLPYRGQPQS+I++S F+HLP
Sbjct: 577 EPLINLYVENQADLAMRLVFEMMILCGEVVATFGSQHNIPLPYRGQPQSNIDVSAFAHLP 636

Query: 182 EGPVRSLALVKVMRAAEIDFRKPARHGVLGLPGYVQFTSPIRRYLDLLAHYQVKAFLR-G 240
           EGPVRS ++VKVMRAAE++FR P RHGVLG+PGYVQFTSPIRRY+DL AHYQ+KAFLR G
Sbjct: 637 EGPVRSSSIVKVMRAAEMNFRCPVRHGVLGIPGYVQFTSPIRRYMDLTAHYQIKAFLRGG 696

Query: 241 EPLPFSPGKLEGIAAVVNDRFRTVRKLCNSSLRYWILEYLRRQPKEKKYRALVLRFLKDR 300
           +  PFS G+LEGIAA VN + + VRKL N+ LRYW++E+LRRQ K KKY ALVLRF+KDR
Sbjct: 697 DNFPFSAGELEGIAASVNMQSKVVRKLSNTGLRYWVIEFLRRQEKGKKYTALVLRFVKDR 756

Query: 301 IAALLLVEVGFQASAWVSLGAQIGDEVMVKVEEAHPRDDVIFLKEVV 347
           IA+LLLVEVGFQA+AWVS G Q+GDE+ V+VEEAHPRDD+I  KEV+
Sbjct: 757 IASLLLVEVGFQATAWVSEGKQVGDEIEVRVEEAHPRDDLILFKEVI 803


>AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7616242 REVERSE LENGTH=1012
          Length = 1012

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 46/336 (13%)

Query: 2   RRGTSVFLPTATYSMFPEKLAMEAMSLRQGEICNAVTVSVVLHKDGSIAECSVLNSLIKP 61
           +RGTSV+L      M P+ L  +  SLR      A +V   +  D  I       S+IK 
Sbjct: 606 KRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKS 665

Query: 62  TYMLTY-ESASELLHLNLKEEV--ELRILSEAATLRLNWRRQQGAVETASLETRIKVSNP 118
           +  L+Y E+ + +    L + +  +LR ++  A +    R  +GA+  AS E +  + +P
Sbjct: 666 SAALSYIEAQARMDDSRLTDSLTTDLRNMNTLAKIMRQRRIDRGALTLASAEVKFDI-DP 724

Query: 119 EDAEP-SINLYVESQADPAMRLVSEMMI-----LCGEAMATFGSRNEI---PLPYRGQPQ 169
           E+ +P +I +Y   Q   A ++V E M+     + G+ +  F S + +   P P R   +
Sbjct: 725 ENHDPLNIGMY---QILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLE 781

Query: 170 S----------DINLSEFSHLPEGPVRSLA-------LVKVMRA---------AEIDFRK 203
                       +++S    L +   R++        L++++              D   
Sbjct: 782 PLLRTAAAIGLTLDVSSSKALADSLDRAVGEDPYFNKLIRILATRCMTQAVYFCSGDLSP 841

Query: 204 PARHGV-LGLPGYVQFTSPIRRYLDLLAHYQVKAFLRGEPLPF---SPGKLEGIAAVVND 259
           P  H   L  P Y  FTSPIRRY D+  H  + A L    LP       +L  +A  +N 
Sbjct: 842 PEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKLPTVFQDRPQLTSVADNLNY 901

Query: 260 RFRTVRKLCNSSLRYWILEYLRRQPKEKKYRALVLR 295
           R R  +    +S+  ++L Y R +P +++ R + +R
Sbjct: 902 RHRNAQMAGRASVELYVLIYFRTRPTDEEARVVKIR 937


>AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7615881 REVERSE LENGTH=933
          Length = 933

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 46/336 (13%)

Query: 2   RRGTSVFLPTATYSMFPEKLAMEAMSLRQGEICNAVTVSVVLHKDGSIAECSVLNSLIKP 61
           +RGTSV+L      M P+ L  +  SLR      A +V   +  D  I       S+IK 
Sbjct: 527 KRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKS 586

Query: 62  TYMLTY-ESASELLHLNLKEEV--ELRILSEAATLRLNWRRQQGAVETASLETRIKVSNP 118
           +  L+Y E+ + +    L + +  +LR ++  A +    R  +GA+  AS E +  + +P
Sbjct: 587 SAALSYIEAQARMDDSRLTDSLTTDLRNMNTLAKIMRQRRIDRGALTLASAEVKFDI-DP 645

Query: 119 EDAEP-SINLYVESQADPAMRLVSEMMI-----LCGEAMATFGSRNEI---PLPYRGQPQ 169
           E+ +P +I +Y   Q   A ++V E M+     + G+ +  F S + +   P P R   +
Sbjct: 646 ENHDPLNIGMY---QILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLE 702

Query: 170 S----------DINLSEFSHLPEGPVRSLA-------LVKVMRA---------AEIDFRK 203
                       +++S    L +   R++        L++++              D   
Sbjct: 703 PLLRTAAAIGLTLDVSSSKALADSLDRAVGEDPYFNKLIRILATRCMTQAVYFCSGDLSP 762

Query: 204 PARHGV-LGLPGYVQFTSPIRRYLDLLAHYQVKAFLRGEPLPF---SPGKLEGIAAVVND 259
           P  H   L  P Y  FTSPIRRY D+  H  + A L    LP       +L  +A  +N 
Sbjct: 763 PEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKLPTVFQDRPQLTSVADNLNY 822

Query: 260 RFRTVRKLCNSSLRYWILEYLRRQPKEKKYRALVLR 295
           R R  +    +S+  ++L Y R +P +++ R + +R
Sbjct: 823 RHRNAQMAGRASVELYVLIYFRTRPTDEEARVVKIR 858