Miyakogusa Predicted Gene

Lj0g3v0189459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0189459.1 Non Chatacterized Hit- tr|I1K1T0|I1K1T0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.07,0,SUBFAMILY NOT
NAMED,NULL; AUTOPHAGY PROTEIN 16-LIKE,NULL; seg,NULL,gene.g14698.t1.1
         (476 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50590.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   553   e-157

>AT3G50590.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr3:18771292-18779220 FORWARD LENGTH=1614
          Length = 1614

 Score =  553 bits (1425), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 308/496 (62%), Positives = 352/496 (70%), Gaps = 33/496 (6%)

Query: 1    MYGAA-DGSSSDEEGVSK-KKIHIKIRDPISSSTVDVNKIKEATRQLKLGEGLP-PPTRT 57
            MYGA  DGSSSDEEGV+K KK+ I+IR+  +S+TVDVNK+KEA +  KLG+GL    +RT
Sbjct: 1132 MYGATGDGSSSDEEGVTKPKKLQIRIREKPTSTTVDVNKLKEAAKTFKLGDGLGLTMSRT 1191

Query: 58   RSSISGNQDLGQILSLXXXXXXXXXXXXXXXX---DPFGTDAFTQ-PDSTSQPTIGVVSG 113
            +S  +G+QDLGQ+LS                    DPF   ++TQ P   SQP    V  
Sbjct: 1192 KSINAGSQDLGQMLSQPSSSTVATTTAPSSASAPVDPFAMSSWTQQPQPVSQPAPPGV-- 1249

Query: 114  GAKAGPIPEDFFQHTVSSLQVAASLPPAGTFLSRF---------TPGGP-ISNTTPNQVS 163
               A PIPEDFFQ+T+ S++VA +LPP GT+LS+            GGP  +N TP    
Sbjct: 1250 ---AAPIPEDFFQNTIPSVEVAKTLPPPGTYLSKMDQAARAAIAAQGGPNQANNTPLP-D 1305

Query: 164  VSEADVGFXXXXXXXXXXXXXXXXESIGLPDGGVPPQSSAQAVVMPXXXXXXXXXXXXXX 223
            +   D G                 +++GLPDGGV  Q   Q  V                
Sbjct: 1306 IGLPDGGVPQQYPQQTSQQPGAPFQTVGLPDGGVRQQYPGQNQV-------PSQVPVSTQ 1358

Query: 224  PLDLSVLGVPNSADSGKP-SQSSSAPVSVHPGQVPRGAAASVCFKIGLAHLELNNLSDAL 282
            PLDLSVLGVPN+ DSGKP  Q  S P SV PGQVPRGAAA VCFK GLAHLE N L DAL
Sbjct: 1359 PLDLSVLGVPNTGDSGKPPGQPQSPPASVRPGQVPRGAAAPVCFKTGLAHLEQNQLPDAL 1418

Query: 283  SCFDEAFLALAKEQSRGSDIKAQATICAQYKLAVTLLREIGRLQKVHGPSAISAKDEMAR 342
            SCFDEAFLALAK+QSRG+DIKAQATICAQYK+AVTLLREI RLQ+V G SA+SAKDEMAR
Sbjct: 1419 SCFDEAFLALAKDQSRGADIKAQATICAQYKIAVTLLREILRLQRVQGASALSAKDEMAR 1478

Query: 343  LSRHLGSLPLLAKHRINCIRTAIKRNMEVQNYAYSKQMLELLFTKAPPSKQEEFRTLIDL 402
            LSRHL SLPLLAKHRINCIRTAIKRNMEVQNY YSKQMLELL +KAP SKQEE R L+DL
Sbjct: 1479 LSRHLASLPLLAKHRINCIRTAIKRNMEVQNYGYSKQMLELLLSKAPASKQEELRGLVDL 1538

Query: 403  CVQRGLTNKSIDPLEDPSQFCSATLSRLSTIGYDVCDLCGAKFSAVTAPGCIVCGMGSIK 462
            CVQRG +NKSIDPLEDPSQ CSATLSRLSTIGYDVCDLCGAKF+A+++PGCI+CGMGSIK
Sbjct: 1539 CVQRGTSNKSIDPLEDPSQLCSATLSRLSTIGYDVCDLCGAKFAALSSPGCIICGMGSIK 1598

Query: 463  RSDAVAG--PVSSPFG 476
            RSDA+AG  PVS+PFG
Sbjct: 1599 RSDALAGPAPVSTPFG 1614