Miyakogusa Predicted Gene

Lj0g3v0189029.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0189029.1 tr|B9IQH3|B9IQH3_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_249644
PE=4,41.44,0.00000000003,seg,NULL; DEOXYNUCLEOSIDE KINASE,NULL;
DEOXYNUCLEOSIDE KINASE,Deoxynucleoside kinase,CUFF.12038.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72040.1 | Symbols:  | P-loop containing nucleoside triphosph...   119   3e-27

>AT1G72040.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:27112159-27114248
           REVERSE LENGTH=580
          Length = 580

 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 78/96 (81%), Gaps = 3/96 (3%)

Query: 171 RLNRRQKGSSSSIP-PSNPDLLAIPGVGPRNLRKLVQKGIEGVAQLKQLYKDKFFGKSSE 229
           R+NRR + SS S     NPDLL IPGVG RN RKLV  GI  VA+LK+LYKDKF+ K+S+
Sbjct: 160 RMNRRNRSSSGSGEFVGNPDLLKIPGVGLRNQRKLVDNGIGDVAELKKLYKDKFW-KASQ 218

Query: 230 KMVEYLQSSVGIIHKNHAESITTFIKKSVEGDEEKE 265
           KMV+YL+SSVGIIH+NHAESITTFIK+SV+ DE K+
Sbjct: 219 KMVDYLRSSVGIIHRNHAESITTFIKESVD-DELKD 253