Miyakogusa Predicted Gene

Lj0g3v0188989.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188989.1 Non Chatacterized Hit- tr|I1ISY6|I1ISY6_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,40.31,3e-18,POZ
domain,BTB/POZ fold; BTB,BTB/POZ; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Broad-Complex,CUFF.12044.1
         (172 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G46260.1 | Symbols:  | BTB/POZ/Kelch-associated protein | chr...   187   2e-48
AT3G61600.2 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protei...   181   2e-46
AT3G61600.1 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protei...   181   2e-46
AT4G01160.1 | Symbols:  | BTB/POZ/Kelch-associated protein | chr...   157   3e-39

>AT2G46260.1 | Symbols:  | BTB/POZ/Kelch-associated protein |
           chr2:18996111-18998463 FORWARD LENGTH=561
          Length = 561

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/240 (48%), Positives = 135/240 (56%), Gaps = 74/240 (30%)

Query: 5   SCESSFSFAFNDTRFSDKLLRIEIMNDPI-------------------KRRRCEN----- 40
           S E  F FAFND+ FSD+LLRIEI+  P                    KRRR +N     
Sbjct: 26  SSEGDFGFAFNDSNFSDRLLRIEILGGPSDSRSDAEGCTSIADWARHRKRRREDNKKDNG 85

Query: 41  ----------------------------GD-----------EAANNNDSI-----WTMDY 56
                                       GD           EA + +D       W +D 
Sbjct: 86  VAISDIVACAEEQILTDNNQPDMDDAPGGDNLDDEGEAMVEEALSGDDDASSEPNWGIDC 145

Query: 57  SGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITLRINASEEAGLMELLKFM 116
           S  TVVRVK LHISS ILAAKSPFFYKLFSNGM ESEQR +TLRI+A EE  LMELL FM
Sbjct: 146 S--TVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRISAQEEGALMELLNFM 203

Query: 117 YSNTLNISATPALLDVLMAADKFDVPSCMKY----LLNPPMTLDSALLYLELPYTVVAAQ 172
           YSN+L+++  PALLDVLMAADKF+V SCM+Y    L N PMT DSALLYLELP +V+ A+
Sbjct: 204 YSNSLSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMAE 263


>AT3G61600.2 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1
           | chr3:22795704-22798069 FORWARD LENGTH=561
          Length = 561

 Score =  181 bits (460), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 109/137 (79%), Gaps = 6/137 (4%)

Query: 40  NGDEAANNNDSIWTMDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITL 99
           +GDE   +++  W MD S  TVVRVK LHISS ILAAKSPFFYKLFSNGM ESEQR +TL
Sbjct: 131 SGDEEETSSEPNWGMDCS--TVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTL 188

Query: 100 RINASEEAGLMELLKFMYSNTLNISATPALLDVLMAADKFDVPSCMKY----LLNPPMTL 155
           RINASEEA LMELL FMYSN ++++  PALLDVLMAADKF+V SCM+Y    L N PMT 
Sbjct: 189 RINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTP 248

Query: 156 DSALLYLELPYTVVAAQ 172
           +SALLYLELP +V+ A+
Sbjct: 249 ESALLYLELPSSVLMAK 265


>AT3G61600.1 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1
           | chr3:22795704-22797953 FORWARD LENGTH=561
          Length = 561

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 109/137 (79%), Gaps = 6/137 (4%)

Query: 40  NGDEAANNNDSIWTMDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITL 99
           +GDE   +++  W MD S  TVVRVK LHISS ILAAKSPFFYKLFSNGM ESEQR +TL
Sbjct: 131 SGDEEETSSEPNWGMDCS--TVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTL 188

Query: 100 RINASEEAGLMELLKFMYSNTLNISATPALLDVLMAADKFDVPSCMKY----LLNPPMTL 155
           RINASEEA LMELL FMYSN ++++  PALLDVLMAADKF+V SCM+Y    L N PMT 
Sbjct: 189 RINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTP 248

Query: 156 DSALLYLELPYTVVAAQ 172
           +SALLYLELP +V+ A+
Sbjct: 249 ESALLYLELPSSVLMAK 265


>AT4G01160.1 | Symbols:  | BTB/POZ/Kelch-associated protein |
           chr4:494976-497006 REVERSE LENGTH=505
          Length = 505

 Score =  157 bits (397), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 37/182 (20%)

Query: 10  FSFAFNDTRFSDKLLRIEIMNDP----------------IKRRRCENGDEAANNNDSIWT 53
           F FAFN+  FSD+LLRIEI                     KRRR +  +E +NN   +  
Sbjct: 10  FRFAFNNVNFSDRLLRIEITQSSGEGEVICSSIVDWARDRKRRREDIVNENSNNKTQVLV 69

Query: 54  -----------------MDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQ 96
                            +  +  +V+ V+ LHISS ILAAKSPFFYKLFSNGM ESEQ+Q
Sbjct: 70  TAAEQEPKSGGEDENERLTNNNTSVLSVQELHISSAILAAKSPFFYKLFSNGMLESEQKQ 129

Query: 97  ITLRINASEEAGLMELLKFMYSNTLNISATPALLDVLMAADKFDVPSCMKY----LLNPP 152
           +TL+I+ASEE  +MELLKFMYSN+L+++A+ ALLDVLM ADKF+V SCMKY    LL  P
Sbjct: 130 MTLKIDASEETAVMELLKFMYSNSLSVTASSALLDVLMVADKFEVASCMKYCSQLLLKMP 189

Query: 153 MT 154
           MT
Sbjct: 190 MT 191