Miyakogusa Predicted Gene

Lj0g3v0188359.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188359.2 Non Chatacterized Hit- tr|I3S3C8|I3S3C8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.82,0,seg,NULL;
Q9LX21_ARATH_Q9LX21;,Domain of unknown function DUF367; DUF367,Domain
of unknown function ,CUFF.12014.2
         (171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10070.2 | Symbols:  | RNase L inhibitor protein-related | ch...   224   2e-59
AT5G10070.1 | Symbols:  | RNase L inhibitor protein-related | ch...   224   3e-59

>AT5G10070.2 | Symbols:  | RNase L inhibitor protein-related |
           chr5:3148684-3150324 REVERSE LENGTH=266
          Length = 266

 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 102/132 (77%), Positives = 118/132 (89%)

Query: 38  LPESGEHQEELTTPKIKLAMWDFGQCDAKKCTGRKLSRFGMLKELRVSNGFGGIVLSPVG 97
           LP   E ++E   PK++LAMWDFGQCDAK+CTGRKL+RF +LKELRV+ GFGG+VLSPVG
Sbjct: 29  LPLDQEPEDEAPVPKVQLAMWDFGQCDAKRCTGRKLARFNLLKELRVNTGFGGVVLSPVG 88

Query: 98  KSCVSREDYSLIQNKGLAVVDCSWARLDDVPFVRLRCSAPRLLPWLVAANPINYGRPCQL 157
           + CVSREDY LI+ KGLAVVDCSWARL DVPF +LRC+APRLLPWLVAANP+NYGRPC+L
Sbjct: 89  RQCVSREDYDLIKRKGLAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCEL 148

Query: 158 SCVEALSAALII 169
           SCVEALSAALI+
Sbjct: 149 SCVEALSAALIL 160


>AT5G10070.1 | Symbols:  | RNase L inhibitor protein-related |
           chr5:3148684-3150324 REVERSE LENGTH=264
          Length = 264

 Score =  224 bits (570), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 102/132 (77%), Positives = 118/132 (89%)

Query: 38  LPESGEHQEELTTPKIKLAMWDFGQCDAKKCTGRKLSRFGMLKELRVSNGFGGIVLSPVG 97
           LP   E ++E   PK++LAMWDFGQCDAK+CTGRKL+RF +LKELRV+ GFGG+VLSPVG
Sbjct: 29  LPLDQEPEDEAPVPKVQLAMWDFGQCDAKRCTGRKLARFNLLKELRVNTGFGGVVLSPVG 88

Query: 98  KSCVSREDYSLIQNKGLAVVDCSWARLDDVPFVRLRCSAPRLLPWLVAANPINYGRPCQL 157
           + CVSREDY LI+ KGLAVVDCSWARL DVPF +LRC+APRLLPWLVAANP+NYGRPC+L
Sbjct: 89  RQCVSREDYDLIKRKGLAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVNYGRPCEL 148

Query: 158 SCVEALSAALII 169
           SCVEALSAALI+
Sbjct: 149 SCVEALSAALIL 160