Miyakogusa Predicted Gene
- Lj0g3v0188059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0188059.1 Non Chatacterized Hit- tr|B9SHN2|B9SHN2_RICCO C,
putative OS=Ricinus communis GN=RCOM_0741300 PE=4 S,32.57,6e-19,Plant
invertase/pectin methylesterase inhibi,Pectinesterase inhibitor; Plant
invertase/pectin methyl,gene.g14569.t1.1
(176 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47960.1 | Symbols: C/VIF1, ATC/VIF1 | cell wall / vacuolar i... 99 2e-21
AT3G17150.1 | Symbols: | Plant invertase/pectin methylesterase ... 77 8e-15
AT3G17152.1 | Symbols: | Plant invertase/pectin methylesterase ... 70 1e-12
AT3G17140.1 | Symbols: | Plant invertase/pectin methylesterase ... 59 2e-09
AT5G64620.1 | Symbols: C/VIF2, ATC/VIF2 | cell wall / vacuolar i... 54 6e-08
AT3G17130.1 | Symbols: | Plant invertase/pectin methylesterase ... 52 3e-07
>AT1G47960.1 | Symbols: C/VIF1, ATC/VIF1 | cell wall / vacuolar
inhibitor of fructosidase 1 | chr1:17681954-17683516
REVERSE LENGTH=205
Length = 205
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 73/141 (51%)
Query: 30 DARFVDEICKQTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLK 89
+ ++ CK+TP + CV L DPR S AD GLALI++D IK T T+N+I L K
Sbjct: 22 EGSIIEPTCKETPDFNLCVSLLNSDPRGSSADTSGLALILIDKIKGLATKTLNEINGLYK 81
Query: 90 GSTGEKKPLNICLDRYKGVVEINVPEAILTLKAGKITIAEDMAAATSDEAQYCEVIFHGK 149
K+ L+ C RYK ++ +VPEAI + G ED EA C+ F+G
Sbjct: 82 KRPELKRALDECSRRYKTILNADVPEAIEAISKGVPKFGEDGVIDAGVEASVCQGGFNGS 141
Query: 150 SPLTIENNGMHVAAEVTRHII 170
SPLT M + VTR I
Sbjct: 142 SPLTSLTKSMQKISNVTRAIF 162
>AT3G17150.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily protein | chr3:5847270-5848121
FORWARD LENGTH=184
Length = 184
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 4 LKSLSLFLFLAIVSMLVVDCEVLQPYDARFVDEICKQTPYPSDCVQFLRQDPRSSGADVK 63
+K S+F+ + + + + + + + E+CK PS CV L DPRS ++++
Sbjct: 9 MKLFSIFVVFMQIQVALSSQPIRYATEPKPIQELCKFNINPSLCVSTLNLDPRSKNSNLR 68
Query: 64 GLALIMVDVIKAKGTNTVNKIKQLLKGSTGEK--KPLNICLDRYKGVVEINVPEAILTLK 121
LA I +D K +N + + K + K C+D Y +P A+ LK
Sbjct: 69 ELAWISIDATSNKVNKMLNYLISVSKNIKDREDLKKYKTCIDDYGTAARRFLPAALDDLK 128
Query: 122 AGKITIAEDMAAATSDEAQYCEVIFHGKSPLTIENNGMHVAAEVTRHIIRHLL 174
AG ++A+ + +CE F G SPLT N H A +T IIR+L
Sbjct: 129 AGFFSLAKSDMESVVSIPDHCEAQFGGSSPLTGRNKATHDIANMTADIIRYLF 181
>AT3G17152.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily protein | chr3:5848812-5849544
FORWARD LENGTH=175
Length = 175
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 9 LFLFLAIVSMLVVDCE--VLQPYDARFVDEICKQTPYPSDCVQFLRQDPRSSGADVKGLA 66
LF ++S + + + P + V +CK+ Y + C+ L DPRS ++++GLA
Sbjct: 7 LFAIFVVLSQIQIALSQTIQSPPGSSLVQRLCKRNRYQALCISTLNVDPRSKTSNLQGLA 66
Query: 67 LIMVDVIKAKGTNTVNKIKQLLKGSTG--EKKPLNICLDRYKGVVEINVPEAILTLKAGK 124
I +D K T+ +LK G + + C++ Y V+ +P LKA K
Sbjct: 67 SISLDATTKKFNVTLTYYISVLKNVRGRVDFERYGTCIEEYGAAVDRFLPAVKADLKAKK 126
Query: 125 ITIAEDMAAATSDEAQYCEVIFHGKSPLTIENNGMHVAAEVTRHIIRHL 173
A + YCE F G+SP+T N +H A++T II+ L
Sbjct: 127 YPEAMSEMKDVVAKPGYCEDQFAGESPVTARNKAVHDIADMTADIIKTL 175
>AT3G17140.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily protein | chr3:5846002-5846589
REVERSE LENGTH=112
Length = 112
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 75 AKGTNTVNKIKQLLKGSTGEKKPLNICLDRYKGVVEINVPEAILTLKAGKITIAEDMAAA 134
A G TV +I + K KKPL+ C RYK +V+++V AI+++K G AE
Sbjct: 13 ALGAETVGQINEAYKTKPMLKKPLDECSMRYKTIVDVDVHTAIISIK-GNPKFAEGAVVD 71
Query: 135 TSDEAQYCEVIF-HGKSPLTIENNGMHVAAEVTRHIIRHLL 174
EA CE F G+SPLT M +VTR IIR LL
Sbjct: 72 AGVEASICEGGFTKGQSPLTSLTQRMEKICDVTRAIIRMLL 112
>AT5G64620.1 | Symbols: C/VIF2, ATC/VIF2 | cell wall / vacuolar
inhibitor of fructosidase 2 | chr5:25831875-25832417
FORWARD LENGTH=180
Length = 180
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 34 VDEICKQTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGSTG 93
++ CK T Y CV L+ DPRS AD KGLA IMV V T+T N I L +
Sbjct: 31 IESTCKTTNYYKFCVSALKSDPRSPTADTKGLASIMVGVGMTNATSTANYIAGNLSATVK 90
Query: 94 E---KKPLNICLDRY 105
+ KK L C ++Y
Sbjct: 91 DTVLKKVLQDCSEKY 105
>AT3G17130.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily protein | chr3:5844495-5845046
REVERSE LENGTH=183
Length = 183
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 25 VLQPYDARFVDEICKQTPYPSDCVQFLRQDPRS-SGADVKGLALIMVDVIKAKGTNTVNK 83
V+Q D +D+IC+ TP+ C LR P S S +D K L M V+ T+T+
Sbjct: 24 VVQSSD-DLIDKICQATPFCDLCEASLR--PFSPSPSDPKSLGAAMASVVLGNMTDTLGY 80
Query: 84 IKQLLKGS--TGEKKPLNICLDRYKGVVEINVPEAILTLKAGKITIA 128
I+ L+K + ++ L C + Y+ VV+ N+P+A+ ++ GK A
Sbjct: 81 IQSLIKHAHDPAAERALAQCAELYRPVVKFNIPQAMEAMQGGKFGFA 127