Miyakogusa Predicted Gene

Lj0g3v0187819.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0187819.1 Non Chatacterized Hit- tr|H3H7V9|H3H7V9_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,35.84,1e-18,seg,NULL; BT1,Biopterin transport-related protein
BT1; FAMILY NOT NAMED,NULL,CUFF.11996.1
         (173 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79710.1 | Symbols:  | Major facilitator superfamily protein ...   185   2e-47
AT5G25050.1 | Symbols:  | Major facilitator superfamily protein ...   181   3e-46
AT5G25040.2 | Symbols:  | Major facilitator superfamily protein ...   155   1e-38
AT5G25040.3 | Symbols:  | Major facilitator superfamily protein ...   155   1e-38
AT5G25040.1 | Symbols:  | Major facilitator superfamily protein ...   155   1e-38
AT5G10820.1 | Symbols:  | Major facilitator superfamily protein ...   120   6e-28
AT2G32040.1 | Symbols:  | Major facilitator superfamily protein ...    80   9e-16
AT5G54860.1 | Symbols:  | Major facilitator superfamily protein ...    70   8e-13

>AT1G79710.1 | Symbols:  | Major facilitator superfamily protein |
           chr1:29995137-29996988 FORWARD LENGTH=497
          Length = 497

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/173 (52%), Positives = 108/173 (62%)

Query: 1   MQEDEENLKDSSDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGVS 60
           M    E  +  +D     + + ++G     L  PL W RML  E HWSF  GVI+VYGVS
Sbjct: 1   MANRSEEAEYENDSRRNHQDKKKEGVLDLVLKRPLRWLRMLIEELHWSFFFGVIIVYGVS 60

Query: 61  QGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIVKPLWGLLTDVLPIFGYRRRP 120
           QGLG   S V+T+YY KD QK+QPS+AQ+Y G+  IPWI+KPLWGLLTDV+P+ GYRRRP
Sbjct: 61  QGLGKGLSKVSTQYYFKDEQKIQPSQAQIYVGLIQIPWIIKPLWGLLTDVVPVLGYRRRP 120

Query: 121 YFVFAGFLGVFGXXXXXXXXXXXXXXXXXXXTAGSAGVAIADVTIDACVAQNS 173
           YF+ AGFL +                      AGSAGVAIADVTIDACV Q S
Sbjct: 121 YFILAGFLAMISMMVLWLHTNLHLALALSCLVAGSAGVAIADVTIDACVTQCS 173


>AT5G25050.1 | Symbols:  | Major facilitator superfamily protein |
           chr5:8632022-8633828 FORWARD LENGTH=499
          Length = 499

 Score =  181 bits (458), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 113/174 (64%), Gaps = 6/174 (3%)

Query: 1   MQEDEENLKDS-SDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGV 59
           M  +E++L++  S  VV+ +   R   CG     P+ W +MLS E HWSFV GV+ +YG+
Sbjct: 1   MVVEEQSLENGGSVHVVKGESNFRNVVCG-----PVRWLKMLSSELHWSFVFGVVSLYGI 55

Query: 60  SQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIVKPLWGLLTDVLPIFGYRRR 119
           +QGLGG+   VAT+YYMKDVQKVQPSE+Q    IT IPWI+KPLWG+LTDVLPIFG+ RR
Sbjct: 56  NQGLGGSLGRVATEYYMKDVQKVQPSESQALTAITKIPWIIKPLWGILTDVLPIFGFHRR 115

Query: 120 PYFVFAGFLGVFGXXXXXXXXXXXXXXXXXXXTAGSAGVAIADVTIDACVAQNS 173
           PYF+ AG LGV                     T  SA +AIADVTIDAC A NS
Sbjct: 116 PYFILAGVLGVVSLLFISLHSNLHLYLALFWMTISSAAMAIADVTIDACTAYNS 169


>AT5G25040.2 | Symbols:  | Major facilitator superfamily protein |
           chr5:8622185-8623965 FORWARD LENGTH=517
          Length = 517

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 105/175 (60%), Gaps = 7/175 (4%)

Query: 1   MQEDEENLKDS-SDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGV 59
           M  +E+N+++  S  VVE++   R   CG     P+ W +ML+ + HWS+V  V+   G+
Sbjct: 1   MAREEQNIENRGSVHVVERESNLRSVVCG-----PVRWLKMLASKLHWSYVFAVVSNCGI 55

Query: 60  SQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIV-KPLWGLLTDVLPIFGYRR 118
           +QG G +   VAT YYMKDVQKVQPS+ Q    IT I WI+ KPL+G+LTDVLPIFG+ R
Sbjct: 56  NQGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVLPIFGFHR 115

Query: 119 RPYFVFAGFLGVFGXXXXXXXXXXXXXXXXXXXTAGSAGVAIADVTIDACVAQNS 173
           RPYF+ AG +GV                     T  SA +AIADVTIDAC   NS
Sbjct: 116 RPYFILAGVIGVVSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIDACTTYNS 170


>AT5G25040.3 | Symbols:  | Major facilitator superfamily protein |
           chr5:8622185-8623888 FORWARD LENGTH=434
          Length = 434

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 105/175 (60%), Gaps = 7/175 (4%)

Query: 1   MQEDEENLKDS-SDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGV 59
           M  +E+N+++  S  VVE++   R   CG     P+ W +ML+ + HWS+V  V+   G+
Sbjct: 1   MAREEQNIENRGSVHVVERESNLRSVVCG-----PVRWLKMLASKLHWSYVFAVVSNCGI 55

Query: 60  SQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIV-KPLWGLLTDVLPIFGYRR 118
           +QG G +   VAT YYMKDVQKVQPS+ Q    IT I WI+ KPL+G+LTDVLPIFG+ R
Sbjct: 56  NQGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVLPIFGFHR 115

Query: 119 RPYFVFAGFLGVFGXXXXXXXXXXXXXXXXXXXTAGSAGVAIADVTIDACVAQNS 173
           RPYF+ AG +GV                     T  SA +AIADVTIDAC   NS
Sbjct: 116 RPYFILAGVIGVVSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIDACTTYNS 170


>AT5G25040.1 | Symbols:  | Major facilitator superfamily protein |
           chr5:8622185-8623965 FORWARD LENGTH=457
          Length = 457

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 105/175 (60%), Gaps = 7/175 (4%)

Query: 1   MQEDEENLKDS-SDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGV 59
           M  +E+N+++  S  VVE++   R   CG     P+ W +ML+ + HWS+V  V+   G+
Sbjct: 1   MAREEQNIENRGSVHVVERESNLRSVVCG-----PVRWLKMLASKLHWSYVFAVVSNCGI 55

Query: 60  SQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIV-KPLWGLLTDVLPIFGYRR 118
           +QG G +   VAT YYMKDVQKVQPS+ Q    IT I WI+ KPL+G+LTDVLPIFG+ R
Sbjct: 56  NQGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVLPIFGFHR 115

Query: 119 RPYFVFAGFLGVFGXXXXXXXXXXXXXXXXXXXTAGSAGVAIADVTIDACVAQNS 173
           RPYF+ AG +GV                     T  SA +AIADVTIDAC   NS
Sbjct: 116 RPYFILAGVIGVVSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIDACTTYNS 170


>AT5G10820.1 | Symbols:  | Major facilitator superfamily protein |
           chr5:3420876-3423166 REVERSE LENGTH=503
          Length = 503

 Score =  120 bits (300), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 102/172 (59%), Gaps = 1/172 (0%)

Query: 2   QEDEENLKDSSDGVVEQKYETRKGGCGGCLCIPLHWFRMLSRETHWSFVLGVILVYGVSQ 61
            +D+  LK  SD   E K + R+      L  P  W +MLS   + SFVLGV+LVYGV+Q
Sbjct: 11  SDDKPLLKPISDHS-EIKTKARRNAVVSVLIQPFQWLQMLSSRLNLSFVLGVVLVYGVNQ 69

Query: 62  GLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIVKPLWGLLTDVLPIFGYRRRPY 121
           G  G+   V T YY KDVQ+VQPS  Q+Y G+ YIPW+++P+WGL TDV PI GY+R+PY
Sbjct: 70  GFSGSIFKVVTDYYWKDVQQVQPSVVQLYMGLYYIPWVMRPIWGLFTDVFPIKGYKRKPY 129

Query: 122 FVFAGFLGVFGXXXXXXXXXXXXXXXXXXXTAGSAGVAIADVTIDACVAQNS 173
           FV +G LG+                        SA +AIADV IDAC+A NS
Sbjct: 130 FVVSGVLGLVSAIAIVVLGKLPAALALSCLLGVSAAMAIADVVIDACIATNS 181


>AT2G32040.1 | Symbols:  | Major facilitator superfamily protein |
           chr2:13635116-13637592 FORWARD LENGTH=560
          Length = 560

 Score = 79.7 bits (195), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 2/81 (2%)

Query: 51  LGVILVYGVSQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGITYIPWIVKPLWGLLTDV 110
           + V +VY V   LG   + +A  +Y+KD   + P+E  V  G++ +PW+VKPL+G ++D 
Sbjct: 128 VAVAMVYFVQGVLG--LARLAVSFYLKDDLHLDPAETAVITGLSSLPWLVKPLYGFISDS 185

Query: 111 LPIFGYRRRPYFVFAGFLGVF 131
           +P+FGYRRR Y V +G LG F
Sbjct: 186 VPLFGYRRRSYLVLSGLLGAF 206


>AT5G54860.1 | Symbols:  | Major facilitator superfamily protein |
           chr5:22284721-22287025 FORWARD LENGTH=491
          Length = 491

 Score = 69.7 bits (169), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)

Query: 35  LHWFRMLSRETHWSFVLGVILVYGVSQGLGGAFSGVATKYYMKDVQKVQPSEAQVYGGIT 94
           +HW + L      +F+  V L+Y  +QG   +F   A  Y +KD  ++ PS +Q    + 
Sbjct: 2   IHWLKQLRSAFGVAFLWLVCLIY-FTQGFR-SFVWTAVSYQLKDRLQLSPSASQFVFSVA 59

Query: 95  YIPWIVKPLWGLLTDVLPIFGYRRRPYFVFAGFLGVFG--XXXXXXXXXXXXXXXXXXXT 152
           + PW +KPL+G+++D +PI G +R PY V +  L +                       T
Sbjct: 60  FFPWSIKPLYGIISDCIPIGGKKRTPYLVISTVLSLVPWLVLGLDSTSRSSSLYLMIFLT 119

Query: 153 AGSAGVAIADVTIDACVAQ 171
             + G A+ADV IDA +A+
Sbjct: 120 VQNLGSAMADVVIDAMIAE 138