Miyakogusa Predicted Gene
- Lj0g3v0187379.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0187379.1 Non Chatacterized Hit- tr|I1M1Y0|I1M1Y0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53610
PE,37.79,5e-19,DUF599,Protein of unknown function DUF599; FAMILY NOT
NAMED,NULL,CUFF.11922.1
(194 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18215.1 | Symbols: | Protein of unknown function, DUF599 | ... 222 1e-58
AT5G24600.1 | Symbols: | Protein of unknown function, DUF599 | ... 163 9e-41
AT5G24600.2 | Symbols: | Protein of unknown function, DUF599 | ... 158 2e-39
AT5G10580.1 | Symbols: | Protein of unknown function, DUF599 | ... 83 1e-16
AT5G46060.1 | Symbols: | Protein of unknown function, DUF599 | ... 81 5e-16
AT4G31330.1 | Symbols: | Protein of unknown function, DUF599 | ... 79 2e-15
AT5G24790.1 | Symbols: | Protein of unknown function, DUF599 | ... 60 7e-10
AT5G10580.2 | Symbols: | Protein of unknown function, DUF599 | ... 49 2e-06
AT5G43180.1 | Symbols: | Protein of unknown function, DUF599 | ... 47 9e-06
>AT3G18215.1 | Symbols: | Protein of unknown function, DUF599 |
chr3:6240968-6242358 FORWARD LENGTH=244
Length = 244
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 139/190 (73%), Gaps = 8/190 (4%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNSDDTAP-MLYSTYS 59
MM++P KNG LAVQTIRNNIMASTLLATTAI S+IG+F SN+ +S TA ++Y + S
Sbjct: 53 MMTEPLKNGTLAVQTIRNNIMASTLLATTAITLCSIIGVFVSNSSSSKSTATNLIYGSKS 112
Query: 60 -----IKRISITICFLVAFLCNVQSIRCYAHVSFLIIGPTLRDKREYMEYITKTLNRGSH 114
K +I ICFL+AFLCN+QSIR YAHVSFL+ P R KRE+ EY+++ LNR S+
Sbjct: 113 PRLASFKNFAILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREHCEYVSRNLNRASY 172
Query: 115 SWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAKIARDLHSNSFRKERGT 174
WSLGLRAFY SFPLFLW +GPIPMF CCC+ S ILY LDTT R LHS SFR+ +
Sbjct: 173 FWSLGLRAFYFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSFTRHLHSQSFRETADS 232
Query: 175 HD--VESAVE 182
D +ESAV
Sbjct: 233 MDGEIESAVH 242
>AT5G24600.1 | Symbols: | Protein of unknown function, DUF599 |
chr5:8421790-8423342 REVERSE LENGTH=248
Length = 248
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 122/208 (58%), Gaps = 29/208 (13%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNSDDTAPMLYS---- 56
MM D +KNGVLAVQT+RNNIMASTLLA+TAI SLI + ++A + + ++
Sbjct: 52 MMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSA-TGERSVWFVFGDKSD 110
Query: 57 -TYSIKRISITICFLVAFLCNVQSIRCYAHVSFLI---------IGPTLRDKREYM---E 103
+S+K +I +CFLVAFL NVQSIR Y+H S LI + R M +
Sbjct: 111 RAFSLKFFAILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQD 170
Query: 104 YITKTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAKIARDL 163
Y+ T+NRGS+ WSLGLRAFY S PLFLWI+GPIPMF CC+ LY LD T
Sbjct: 171 YVAATVNRGSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLTF------ 224
Query: 164 HSNSFRKERGTHDVESAVEPDYHPLAGN 191
+S + G D E EP+ LA N
Sbjct: 225 --DSMKCSVGAADAE---EPEIRSLAQN 247
>AT5G24600.2 | Symbols: | Protein of unknown function, DUF599 |
chr5:8421697-8423342 REVERSE LENGTH=243
Length = 243
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 117/188 (62%), Gaps = 20/188 (10%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNSDDTAPMLYS---- 56
MM D +KNGVLAVQT+RNNIMASTLLA+TAI SLI + ++A + + ++
Sbjct: 52 MMEDSSKNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSA-TGERSVWFVFGDKSD 110
Query: 57 -TYSIKRISITICFLVAFLCNVQSIRCYAHVSFLI---------IGPTLRDKREYM---E 103
+S+K +I +CFLVAFL NVQSIR Y+H S LI + R M +
Sbjct: 111 RAFSLKFFAILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQD 170
Query: 104 YITKTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAK--IAR 161
Y+ T+NRGS+ WSLGLRAFY S PLFLWI+GPIPMF CC+ LY LD T + R
Sbjct: 171 YVAATVNRGSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLTGSDILKR 230
Query: 162 DLHSNSFR 169
L + +++
Sbjct: 231 VLFNGTYK 238
>AT5G10580.1 | Symbols: | Protein of unknown function, DUF599 |
chr5:3347511-3348657 FORWARD LENGTH=246
Length = 246
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKF-TSLIGIFASNAWNSDDTAPMLYS--- 56
+M D K +LAVQT+RN IM TL+ATT I L + +S +Y
Sbjct: 54 IMKDNEKKNILAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHG 113
Query: 57 --TYSIKRISITICFLVAFLCNVQSIRCYAHVSFLIIGPTLRDKREYME--------YIT 106
T ++K ++I FL AF + SIR V+ LI P ++ E Y++
Sbjct: 114 DFTVALKYVTILTIFLFAFFSHSLSIRFINQVNILINAPQEPFSDDFGEIGSFVTPEYVS 173
Query: 107 KTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAKIARDLHSN 166
+ L + ++G R FY+ PL LWI+GP+ +F L +LY LD L SN
Sbjct: 174 ELLEKAFLLNTVGNRLFYMGLPLMLWIFGPVLVFLSSALIIPVLYNLDFVF-----LLSN 228
Query: 167 SFRKERGTHDVESAVEPDYHP 187
KE+G D + ++ P
Sbjct: 229 ---KEKGKVDCNGGCDDNFSP 246
>AT5G46060.1 | Symbols: | Protein of unknown function, DUF599 |
chr5:18681533-18682459 FORWARD LENGTH=248
Length = 248
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 11/168 (6%)
Query: 12 AVQTIRNNIMASTLLATTAIKFTSLIG--IFASNAWNSDDTAPMLYS-----TYSIKRIS 64
A+ + ++I AST +A+ A+ +SLIG I +S + T +Y T IK S
Sbjct: 67 ALTVLSSSISASTFMASIALTLSSLIGAWIGSSPVSMTVFTGHFIYGDTSSITMVIKYTS 126
Query: 65 ITICFLVAFLCNVQSIRCYAHVSFLIIGPTLRDKREYMEYITKTLNRGSHSWSLGLRAFY 124
+ ICFLVAF C +QS RC+ H ++LI P D M + + + RG + WSLGLRA Y
Sbjct: 127 LLICFLVAFCCFIQSTRCFLHANYLITTPG-EDIPPDM--VKRFVLRGGNYWSLGLRALY 183
Query: 125 LSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAKIARDLHSNSFRKER 172
L+ L LW++GP+PMF L + LY LD+ + +A+ L+ +F E+
Sbjct: 184 LALDLLLWLFGPVPMFINSVLMVICLYFLDSNS-VAQPLYHRTFEAEQ 230
>AT4G31330.1 | Symbols: | Protein of unknown function, DUF599 |
chr4:15202354-15203151 FORWARD LENGTH=239
Length = 239
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 26/194 (13%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNSDDTAPMLYSTY-- 58
++ D K +LAVQT+RN IM STL+ATT+I + + S+ + P+ + +
Sbjct: 54 IIKDNDKKNILAVQTLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKK--PLNDAVFGA 111
Query: 59 ------SIKRISITICFLVAFLCNVQSIRCYAHVSFLIIGPTLRDKRE------YMEYIT 106
++K ++I FL +F + SIR V+ LI P ++ E EY+
Sbjct: 112 RGEFMVALKYVTILTIFLFSFFSHSLSIRFINQVNILINTPFPPEELEDEMMMTAEEYVA 171
Query: 107 KTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAKIARDLHSN 166
+ L RG ++G R FY + PL LWI+GP+ +F C + +LY LD
Sbjct: 172 ELLERGFILNTVGNRLFYAALPLMLWIFGPVLVFLCSVVMVPLLYNLDFFF--------- 222
Query: 167 SFRKERGTHDVESA 180
F KER D +S+
Sbjct: 223 -FGKERRKLDQKSS 235
>AT5G24790.1 | Symbols: | Protein of unknown function, DUF599 |
chr5:8512076-8513064 FORWARD LENGTH=246
Length = 246
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 37/182 (20%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNSDDTAPMLYSTYSI 60
M+ D K +LAVQT+RN +M +TL+ATT + + A +L STYSI
Sbjct: 54 MIKDNQKTNILAVQTLRNIVMGATLMATTCVLLCA-------------GLAAVLSSTYSI 100
Query: 61 KR------------ISITICFLVAF-------LCNVQSIRCYAHVSFLIIGPTLRDKRE- 100
K+ +I+I +L + SIR V+ L+ P L
Sbjct: 101 KKPLNDAVFGAHGDFAISIKYLTILTIFIFSFFFHSLSIRFLNQVAILVNIPNLDPNPSG 160
Query: 101 ----YMEYITKTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTT 156
E++++ +G ++G R FY F L LWI+GPI +F + L+L LD
Sbjct: 161 CVFLTSEHVSEMFEKGIFLNTVGNRLFYAGFSLMLWIFGPILVFFSVLVMVLVLSHLDFV 220
Query: 157 AK 158
++
Sbjct: 221 SR 222
>AT5G10580.2 | Symbols: | Protein of unknown function, DUF599 |
chr5:3347511-3349045 FORWARD LENGTH=192
Length = 192
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 1 MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKF-TSLIGIFASNAWNSDDTAPMLYS--- 56
+M D K +LAVQT+RN IM TL+ATT I L + +S +Y
Sbjct: 54 IMKDNEKKNILAVQTLRNTIMGGTLMATTCILLCAGLAAVLSSTYSIKKPLNDAVYGAHG 113
Query: 57 --TYSIKRISITICFLVAFLCNVQSIRCYAHVSFLIIGP 93
T ++K ++I FL AF + SIR V+ LI P
Sbjct: 114 DFTVALKYVTILTIFLFAFFSHSLSIRFINQVNILINAP 152
>AT5G43180.1 | Symbols: | Protein of unknown function, DUF599 |
chr5:17336425-17337816 REVERSE LENGTH=239
Length = 239
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 33/182 (18%)
Query: 7 KNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNS-------DD------TAPM 53
K G+LAVQ++RN M + L AT AI + +NA+ + DD A +
Sbjct: 59 KTGMLAVQSLRNKKMVTILTATIAILIFLSLAAVTNNAFKASHLITAADDIFFGSQNAKI 118
Query: 54 LYSTYSIKR-----------ISITICFLVAFLCNVQSIRCYAHV--SFLIIGPTLRDKRE 100
Y+ I+++ FL N + + ++ I G +
Sbjct: 119 FVLKYASASLLLAASFFFSSIALSYLMDAIFLINAIAKKHEGDCDCAYDITGTS-----S 173
Query: 101 YMEYITKTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLD--TTAK 158
+ EY L RG +G R +S PL LW++GP+P+ A +LY D +TAK
Sbjct: 174 FREYTRLVLERGFFMAMVGNRVMCVSIPLLLWMFGPLPVLASSLGLVWVLYQFDFPSTAK 233
Query: 159 IA 160
I+
Sbjct: 234 IS 235