Miyakogusa Predicted Gene

Lj0g3v0186889.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0186889.2 tr|D7M1N3|D7M1N3_ARALL Enhancer of ag-4 2
OS=Arabidopsis lyrata subsp. lyrata GN=HUA2 PE=4 SV=1,95.65,0.0000004,
,CUFF.11903.2
         (144 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23150.1 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing p...    60   5e-10
AT5G08230.1 | Symbols:  | Tudor/PWWP/MBT domain-containing prote...    49   9e-07

>AT5G23150.1 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing
           protein | chr5:7786173-7792080 FORWARD LENGTH=1392
          Length = 1392

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/27 (85%), Positives = 25/27 (92%)

Query: 76  RPEDWDKAPDPKKYFVQFFGTEEMFLV 102
           RPEDWD+APDPKKYFVQFFGTEE+  V
Sbjct: 40  RPEDWDRAPDPKKYFVQFFGTEEIAFV 66


>AT5G08230.1 | Symbols:  | Tudor/PWWP/MBT domain-containing protein
           | chr5:2643846-2649788 REVERSE LENGTH=1445
          Length = 1445

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/27 (66%), Positives = 24/27 (88%)

Query: 76  RPEDWDKAPDPKKYFVQFFGTEEMFLV 102
           +PEDW++APDPKK+FVQF+GT E+  V
Sbjct: 40  QPEDWNQAPDPKKHFVQFYGTGEIGFV 66