Miyakogusa Predicted Gene

Lj0g3v0185729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185729.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,83.24,0,PROTEIN
TRANSPORT PROTEIN SEC23,NULL; zf-Sec23_Sec24,Zinc finger,
Sec23/Sec24-type; Sec23_trunk,Sec2,CUFF.11805.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23660.2 | Symbols:  | Sec23/Sec24 protein transport family p...   219   7e-58
AT3G23660.1 | Symbols:  | Sec23/Sec24 protein transport family p...   219   9e-58
AT2G21630.1 | Symbols:  | Sec23/Sec24 protein transport family p...   216   1e-56
AT1G05520.1 | Symbols:  | Sec23/Sec24 protein transport family p...   209   1e-54
AT4G14160.3 | Symbols:  | Sec23/Sec24 protein transport family p...   196   1e-50
AT4G14160.2 | Symbols:  | Sec23/Sec24 protein transport family p...   195   1e-50
AT4G14160.1 | Symbols:  | Sec23/Sec24 protein transport family p...   195   2e-50
AT5G43670.1 | Symbols:  | Sec23/Sec24 protein transport family p...   155   1e-38
AT3G07100.1 | Symbols: ERMO2, SEC24A | Sec23/Sec24 protein trans...    64   9e-11
AT4G01810.1 | Symbols:  | Sec23/Sec24 protein transport family p...    55   4e-08

>AT3G23660.2 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr3:8513666-8517729 REVERSE LENGTH=791
          Length = 791

 Score =  219 bits (559), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 107/193 (55%), Positives = 132/193 (68%), Gaps = 7/193 (3%)

Query: 1   MAEFV--DLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCR 58
           MAE    DLE  DGVRM WNV P +K EA+  V+P+AA  +PI+    +P LPY PLRCR
Sbjct: 1   MAETANTDLEGIDGVRMTWNVWPHSKAEASKCVIPLAACISPIRRHADIPTLPYAPLRCR 60

Query: 59  TCRSILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSP-- 116
           TC + LN +  VDF AK+WICPFC+ RNHFPPHY  IS+ NLP EL+P YTTVEY  P  
Sbjct: 61  TCSAALNAYAQVDFTAKLWICPFCYQRNHFPPHYHVISETNLPGELYPQYTTVEYTLPPP 120

Query: 117 --SDTSPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGS 174
             +      PPVF+FV+DTC+IEEE+ F +SA+ Q + LLPEN+LVG ++FGT  HVH  
Sbjct: 121 VANGEGLVDPPVFVFVLDTCMIEEELDFAKSALKQAIGLLPENALVGFVSFGTQAHVHEL 180

Query: 175 G-SVLSPKPTFSG 186
           G S +S    F G
Sbjct: 181 GFSEMSKVFVFKG 193


>AT3G23660.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr3:8513666-8517729 REVERSE LENGTH=765
          Length = 765

 Score =  219 bits (558), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 107/193 (55%), Positives = 132/193 (68%), Gaps = 7/193 (3%)

Query: 1   MAEFV--DLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCR 58
           MAE    DLE  DGVRM WNV P +K EA+  V+P+AA  +PI+    +P LPY PLRCR
Sbjct: 1   MAETANTDLEGIDGVRMTWNVWPHSKAEASKCVIPLAACISPIRRHADIPTLPYAPLRCR 60

Query: 59  TCRSILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSP-- 116
           TC + LN +  VDF AK+WICPFC+ RNHFPPHY  IS+ NLP EL+P YTTVEY  P  
Sbjct: 61  TCSAALNAYAQVDFTAKLWICPFCYQRNHFPPHYHVISETNLPGELYPQYTTVEYTLPPP 120

Query: 117 --SDTSPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGS 174
             +      PPVF+FV+DTC+IEEE+ F +SA+ Q + LLPEN+LVG ++FGT  HVH  
Sbjct: 121 VANGEGLVDPPVFVFVLDTCMIEEELDFAKSALKQAIGLLPENALVGFVSFGTQAHVHEL 180

Query: 175 G-SVLSPKPTFSG 186
           G S +S    F G
Sbjct: 181 GFSEMSKVFVFKG 193


>AT2G21630.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr2:9250346-9253829 FORWARD LENGTH=761
          Length = 761

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/178 (59%), Positives = 140/178 (78%), Gaps = 4/178 (2%)

Query: 1   MAEFVDLESQDGVRMPWNVIP--GTKQEATNAVVPVAAIYTPIKHFPSMPVL-PYTPLRC 57
           MAEF +LE+QDGVRMPWN+IP    K+++ ++ VPV+AIYTP+K   S  +L PY+PLRC
Sbjct: 1   MAEFGELEAQDGVRMPWNIIPVATKKEQSIDSEVPVSAIYTPLKPLRSQSLLLPYSPLRC 60

Query: 58  RTCRSILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPS 117
           RTCRS+LNP+ +VDF A  W CPFCFNRN FP +Y+S++D+NLP ELFPH TTVEY   S
Sbjct: 61  RTCRSVLNPYSVVDFSACNWGCPFCFNRNPFPLNYSSVADNNLPPELFPHSTTVEYLCDS 120

Query: 118 DTSPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG 175
            +SP  PPVFLFV+DTC+I EE+ FL+S++ Q ++LLP+ S++GLITF + V V+  G
Sbjct: 121 FSSPS-PPVFLFVVDTCLISEELDFLKSSLFQALDLLPDTSILGLITFDSLVRVYELG 177


>AT1G05520.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr1:1631126-1635703 REVERSE LENGTH=783
          Length = 783

 Score =  209 bits (532), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/198 (52%), Positives = 130/198 (65%), Gaps = 16/198 (8%)

Query: 5   VDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRSIL 64
           +D E  DGVRM WNV P TK EA+  V+PVAA  +PI++   +P + Y PLRCR C + L
Sbjct: 7   MDPEGIDGVRMTWNVWPRTKVEASKCVIPVAACISPIRYHRDIPSVEYAPLRCRICTAAL 66

Query: 65  NPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSPH-- 122
           NPF  VDF+AKIWICP CF RNHFPPHY  +S+ N+P EL+P YTTVEY  P+ + P   
Sbjct: 67  NPFARVDFLAKIWICPICFQRNHFPPHYHVMSETNVPCELYPQYTTVEYTLPNPSQPTGV 126

Query: 123 -------------VPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFV 169
                         P VF+FV+DTC+IEEE G+ +SA+ Q + LLPEN+LVG ++FGT  
Sbjct: 127 GNFDQTGAVSGQPSPSVFVFVLDTCMIEEEFGYAKSALKQAIGLLPENALVGFVSFGTQA 186

Query: 170 HVHGSG-SVLSPKPTFSG 186
           HVH  G S L+    F G
Sbjct: 187 HVHELGFSDLTKVYVFRG 204


>AT4G14160.3 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:8167574-8172266 FORWARD LENGTH=620
          Length = 620

 Score =  196 bits (498), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/186 (54%), Positives = 131/186 (70%), Gaps = 2/186 (1%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRS 62
           E +D E  DGVRM WN+ P TK EA+  V+P+AA  +PI+  P +  LPY PL C+TC++
Sbjct: 11  EEMDWEGIDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHPLILDLPYAPLDCKTCKA 70

Query: 63  ILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYD-SPSDTSP 121
           +LN F  VDF A  W+CPFC++RNHFP HY SIS+ NLP EL+P YTTVEY   P  +  
Sbjct: 71  LLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSISEINLPGELYPQYTTVEYTLPPDPSRV 130

Query: 122 HVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSP 180
             PPVF+FV+DTC+IEEE+G+ +SA+ Q + LLPEN+LVG ++FGT  HVH  G S +S 
Sbjct: 131 PPPPVFVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGFVSFGTQAHVHELGFSEMSK 190

Query: 181 KPTFSG 186
              F G
Sbjct: 191 VFVFKG 196


>AT4G14160.2 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:8167574-8173026 FORWARD LENGTH=772
          Length = 772

 Score =  195 bits (496), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 101/186 (54%), Positives = 131/186 (70%), Gaps = 2/186 (1%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRS 62
           E +D E  DGVRM WN+ P TK EA+  V+P+AA  +PI+  P +  LPY PL C+TC++
Sbjct: 11  EEMDWEGIDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHPLILDLPYAPLDCKTCKA 70

Query: 63  ILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYD-SPSDTSP 121
           +LN F  VDF A  W+CPFC++RNHFP HY SIS+ NLP EL+P YTTVEY   P  +  
Sbjct: 71  LLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSISEINLPGELYPQYTTVEYTLPPDPSRV 130

Query: 122 HVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSP 180
             PPVF+FV+DTC+IEEE+G+ +SA+ Q + LLPEN+LVG ++FGT  HVH  G S +S 
Sbjct: 131 PPPPVFVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGFVSFGTQAHVHELGFSEMSK 190

Query: 181 KPTFSG 186
              F G
Sbjct: 191 VFVFKG 196


>AT4G14160.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:8167574-8173026 FORWARD LENGTH=773
          Length = 773

 Score =  195 bits (496), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/186 (54%), Positives = 131/186 (70%), Gaps = 2/186 (1%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRS 62
           E +D E  DGVRM WN+ P TK EA+  V+P+AA  +PI+  P +  LPY PL C+TC++
Sbjct: 11  EEMDWEGIDGVRMTWNLWPRTKVEASKCVIPLAASISPIRRHPLILDLPYAPLDCKTCKA 70

Query: 63  ILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYD-SPSDTSP 121
           +LN F  VDF A  W+CPFC++RNHFP HY SIS+ NLP EL+P YTTVEY   P  +  
Sbjct: 71  LLNAFARVDFAAMNWVCPFCYHRNHFPSHYHSISEINLPGELYPQYTTVEYTLPPDPSRV 130

Query: 122 HVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSP 180
             PPVF+FV+DTC+IEEE+G+ +SA+ Q + LLPEN+LVG ++FGT  HVH  G S +S 
Sbjct: 131 PPPPVFVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGFVSFGTQAHVHELGFSEMSK 190

Query: 181 KPTFSG 186
              F G
Sbjct: 191 VFVFKG 196


>AT5G43670.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr5:17539025-17541733 REVERSE LENGTH=794
          Length = 794

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 120/219 (54%), Gaps = 46/219 (21%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRS 62
           +F++LE+ +G+R  WN  P TK +  + VVP++ +YTP+ HF  +P +PY PL C  C +
Sbjct: 2   DFLELEAIEGLRWSWNSWPTTKSDCESLVVPLSIMYTPLMHFSELPTIPYDPLICSRCGA 61

Query: 63  ILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEY------DSP 116
           +LNP+  VD+ ++IW CPFCF++N FP  Y+ I++ NLPAELFP Y+ VEY       S 
Sbjct: 62  VLNPYARVDYQSRIWSCPFCFHKNLFPRSYSGITETNLPAELFPTYSAVEYSPLPSRQSG 121

Query: 117 SDTS----------------------------------------PHVPPVFLFVIDTCVI 136
           S+T+                                          + P F+FV+D  ++
Sbjct: 122 SNTTTPTAAASWSNGFNQGVRSMPSNSSFSSLASSTVGGGGGVISELGPAFVFVVDASMV 181

Query: 137 EEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG 175
           E+E+  +RS V   +E LPEN LV LITF + V V+  G
Sbjct: 182 EDELRAVRSDVLFVIEQLPENCLVALITFDSMVRVYDLG 220


>AT3G07100.1 | Symbols: ERMO2, SEC24A | Sec23/Sec24 protein
           transport family protein | chr3:2245689-2250077 REVERSE
           LENGTH=1038
          Length = 1038

 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 20/186 (10%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTP------LRCRTCRSILNP 66
           +R+  + IP ++  A+   +P+ A+  P+   P    +P         +RCR CR+ +NP
Sbjct: 321 LRLTTSAIPNSQSLASRWHLPLGAVVCPLAETPEGEEVPLIDFGSTGIIRCRRCRTYVNP 380

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           F       + W C  C   N  P  Y S  D     +  +  P  T  +VE  +P++   
Sbjct: 381 FVTFTDSGRKWRCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMV 440

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPEN------SLVGLITFGTFVHVHG 173
            P +PP++ F+ID  +   + G L   V+Q ++   +N      + +G IT+ + +H + 
Sbjct: 441 RPPMPPIYFFLIDVSISATKSGMLE-VVAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYN 499

Query: 174 SGSVLS 179
             S LS
Sbjct: 500 MKSSLS 505


>AT4G01810.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:776734-779802 REVERSE LENGTH=880
          Length = 880

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 13/166 (7%)

Query: 18  NVIPGTKQEATNAVVPVAAIYTPIKHF-PSMPVLPYTPLRCRTCRSILNPFCMVDFVAKI 76
           N +   K+ A  A +   AI +  +   P   ++   P RC  C +  NP+  +   +  
Sbjct: 164 NKVLKQKKLANVASLGFGAIVSAGREISPGPQIIQRDPHRCLNCGAYSNPYSSILIGSGQ 223

Query: 77  WICPFCFNRNHFPPHYASISDDNLPAELFPHYT--TVEYDSPSDTSPHVPPV-------- 126
           W C  C N N     Y + S + L  + FP  +   V+Y    +  P   P         
Sbjct: 224 WQCVICENMNGSKGEYVASSKNEL--QNFPELSLPLVDYVQTGNKRPGFVPASDSRTSAP 281

Query: 127 FLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVH 172
            + VID C+ E  +  L+S++   V+ LP+ + +G+I +G  V ++
Sbjct: 282 VVLVIDECLDEPHLQHLQSSLHAFVDSLPQTTRLGIILYGRTVSIY 327