Miyakogusa Predicted Gene

Lj0g3v0185409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185409.1 Non Chatacterized Hit- tr|I3T9J9|I3T9J9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,80.21,0,DUF640,Domain of unknown function DUF640; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.11776.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF6...   231   2e-61
AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF6...   231   2e-61
AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF64...   217   4e-57
AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF64...   211   2e-55
AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF64...   203   4e-53
AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF64...   198   2e-51
AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF64...   189   6e-49
AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF64...   189   7e-49
AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF64...   182   8e-47
AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF64...   180   4e-46
AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF64...   176   5e-45

>AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 105/123 (85%), Positives = 114/123 (92%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQKRRDWNTFGQYLKN  PP+ +S C+ NHVLDFLRYLDQFGKTKVH+ GC+F+GQP+
Sbjct: 26  YESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQPE 85

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF SGAIRVYLREV+E QAKARG
Sbjct: 86  PPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKARG 145

Query: 147 IPY 149
           IPY
Sbjct: 146 IPY 148


>AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 105/123 (85%), Positives = 114/123 (92%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQKRRDWNTFGQYLKN  PP+ +S C+ NHVLDFLRYLDQFGKTKVH+ GC+F+GQP+
Sbjct: 26  YESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQPE 85

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG PETNPF SGAIRVYLREV+E QAKARG
Sbjct: 86  PPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKARG 145

Query: 147 IPY 149
           IPY
Sbjct: 146 IPY 148


>AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF640)
           | chr4:10250794-10251369 FORWARD LENGTH=191
          Length = 191

 Score =  217 bits (552), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 98/124 (79%), Positives = 110/124 (88%), Gaps = 1/124 (0%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQKRRDWNTF QYLK+  PP+ +SQ ++ HVL FLRYLDQFGKTKVH   C+FFGQPD
Sbjct: 38  YESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQPD 97

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEH-GGSPETNPFGSGAIRVYLREVKEGQAKAR 145
           PP PCTCPL+QAWGSLDALIGRLRAAYEEH GGSP+TNPF +G+IRV+LREV+E QAKAR
Sbjct: 98  PPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKAR 157

Query: 146 GIPY 149
           GIPY
Sbjct: 158 GIPY 161


>AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF640)
           | chr1:29632054-29632641 REVERSE LENGTH=195
          Length = 195

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 94/139 (67%), Positives = 110/139 (79%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQKRRDWNTF QYL+N  PP+ +SQC  NH+LDFL+YLDQFGKTKVH+HGC+FFGQ +
Sbjct: 41  YESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQVE 100

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           P   C CPL+QAWGSLDALIGRLRAA+EE+GG PE NPF  G IRV+LREV++ QAKARG
Sbjct: 101 PAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKARG 160

Query: 147 IPYTXXXXXXRSLITGSHD 165
           +PY       +     SHD
Sbjct: 161 VPYKKRKKRKKRNPMKSHD 179


>AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF640)
           | chr1:2174202-2174792 REVERSE LENGTH=196
          Length = 196

 Score =  203 bits (517), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 108/123 (87%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQKRRDWNTF QYLKN  PP+++S+C+  HV++FL+YLDQFGKTKVH+  C +FG   
Sbjct: 32  YESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQQ 91

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PP+PC+CPL+QAWGSLDALIGRLRAAYEE+GG P++NPF + A+R+YLREV+E QAKARG
Sbjct: 92  PPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKARG 151

Query: 147 IPY 149
           IPY
Sbjct: 152 IPY 154


>AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF640)
           | chr5:23645535-23646083 REVERSE LENGTH=182
          Length = 182

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 108/124 (87%), Gaps = 1/124 (0%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQKRRDWNTF QYL+N  PP+++S+C+  HVL+FL+YLDQFGKTKVH   C FFGQP+
Sbjct: 20  YESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQPN 79

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGS-PETNPFGSGAIRVYLREVKEGQAKAR 145
           PP+ CTCPL+QAWGSLDALIGRLRAA+EE GG  PE+NPF + A+R+YL+EV++ QAKAR
Sbjct: 80  PPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKAR 139

Query: 146 GIPY 149
           GIPY
Sbjct: 140 GIPY 143


>AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF640)
           | chr1:5785373-5785867 FORWARD LENGTH=164
          Length = 164

 Score =  189 bits (481), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 97/123 (78%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YESQK RDWNTF QYL    PP+ V +C  NH+LDFL+  DQFGKTKVH+ GC+FFGQ +
Sbjct: 24  YESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHIQGCVFFGQKE 83

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PP  C CPL+QAWGSLDALIGRLRAAYEE+GG  E NPF  G IR++LREV+  QAKARG
Sbjct: 84  PPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLREVRGSQAKARG 143

Query: 147 IPY 149
           + Y
Sbjct: 144 VLY 146


>AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF640)
           | chr3:8326958-8328010 FORWARD LENGTH=195
          Length = 195

 Score =  189 bits (481), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 96/123 (78%), Positives = 111/123 (90%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YE+QKRRDWNTFGQYL+N  PP+S+S+C+  HVL+FLRYLDQFGKTKVH H C FFG P+
Sbjct: 49  YENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPN 108

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PPAPC CPLRQAWGSLDALIGRLRAA+EE+GGSPETNPFG+ A+R+YLREV++ QAKARG
Sbjct: 109 PPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARG 168

Query: 147 IPY 149
           I Y
Sbjct: 169 ISY 171


>AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF640)
           | chr2:13277903-13278562 FORWARD LENGTH=219
          Length = 219

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/123 (73%), Positives = 110/123 (89%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YE+QKRRDWNTFGQYL+N  PP+S+S+C+  HVL+FLRYLDQFGKTKVH + C F+G P+
Sbjct: 55  YENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPN 114

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG PETNPFG+ A+R+YLREV++ Q+KARG
Sbjct: 115 PPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARG 174

Query: 147 IPY 149
           + Y
Sbjct: 175 VSY 177


>AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF640)
           | chr3:1215812-1216417 REVERSE LENGTH=201
          Length = 201

 Score =  180 bits (457), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 108/123 (87%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YE+QKRRDWNTF QYL+N  PP+S++ C+  HVLDFLRYLDQFGKTKVH   C FFG P+
Sbjct: 34  YENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLPN 93

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG+PET+PFGS ++R++LREV++ QAK+RG
Sbjct: 94  PPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSRG 153

Query: 147 IPY 149
           + Y
Sbjct: 154 VSY 156


>AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF640)
           | chr5:10454541-10455113 REVERSE LENGTH=190
          Length = 190

 Score =  176 bits (447), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 91/123 (73%), Positives = 105/123 (85%)

Query: 27  YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
           YE+QKRRDWNTF QYL+N  PP+S+  C+  HVL+FLRYLDQFGKTKVH   C FFG P+
Sbjct: 26  YENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPN 85

Query: 87  PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
           PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG PE NPFGS A+R++LREV++ QAKARG
Sbjct: 86  PPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARG 145

Query: 147 IPY 149
           + Y
Sbjct: 146 VSY 148