Miyakogusa Predicted Gene

Lj0g3v0183899.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0183899.1 Non Chatacterized Hit- tr|I3S795|I3S795_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,seg,NULL,CUFF.11671.1
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G56423.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   226   9e-60

>AT1G56423.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; Has 30201 Blast hits to 17322 proteins in 780
           species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
           Fungi - 3422; Plants - 5037; Viruses - 0; Other
           Eukaryotes - 2996 (source: NCBI BLink). |
           chr1:21129075-21130558 FORWARD LENGTH=270
          Length = 270

 Score =  226 bits (577), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 121/224 (54%), Positives = 153/224 (68%), Gaps = 5/224 (2%)

Query: 1   MGSGTVACGVKEGVKLYFYNIRSAHVERARHRAIESALVDAVSQGMSPKDSATYVQKESK 60
           M SGT+AC VKEGVKLYFYNIRS HVE+AR+ AIE AL +A+  GM  K++A   Q+  +
Sbjct: 50  MSSGTLACAVKEGVKLYFYNIRSIHVEKARNVAIEKALHEALDNGMLAKEAAKEGQRAGE 109

Query: 61  KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQKLG 120
           KAAKLA+RQAKRIIGPI+++GWDFFEA+Y+GGT+TEGFLR               EQ+ G
Sbjct: 110 KAAKLATRQAKRIIGPIVAAGWDFFEALYFGGTLTEGFLRGTGTMVGAYSGGYVGEQRFG 169

Query: 121 RFGYLVGSHLGSWVGGRIGLMVYDVFNGVNLLLQFVQTGEIEVHKASANENSEAPEGYFF 180
           RFGYLVGS LG+WVG R+GLMVYDV NGVN   +  Q+GEI     S NE+ E    Y  
Sbjct: 170 RFGYLVGSTLGNWVGARVGLMVYDVVNGVNFFYETYQSGEI-YEDQSTNESPEDRSTYES 228

Query: 181 GEIP-VYDSSEGSNIYESSPSEESNIYESSPSEESNAYESTEHQ 223
            E P  Y+S E  + YE    E+ + YE SP E+ + YE++ ++
Sbjct: 229 REDPSTYESPEDRSTYE--IREDQSTYE-SPEEDQSTYETSNYE 269