Miyakogusa Predicted Gene

Lj0g3v0182349.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182349.2 Non Chatacterized Hit- tr|A5AF56|A5AF56_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.25,3e-17,seg,NULL; DUF4378,Domain of unknown function DUF4378;
coiled-coil,NULL; GB DEF: HYPOTHETICAL PROTEIN,CUFF.11610.2
         (633 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02390.1 | Symbols:  | Protein of unknown function (DUF3741) ...   176   5e-44
AT5G02390.2 | Symbols:  | Protein of unknown function (DUF3741) ...   122   9e-28
AT1G07620.1 | Symbols: ATOBGM | GTP-binding protein Obg/CgtA | c...    72   1e-12

>AT5G02390.1 | Symbols:  | Protein of unknown function (DUF3741) |
           chr5:508764-511710 REVERSE LENGTH=835
          Length = 835

 Score =  176 bits (446), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 177/597 (29%), Positives = 267/597 (44%), Gaps = 104/597 (17%)

Query: 62  HFNINMKSDILTFLHDPVSPTIYHFHKQQMRSAKMALTRSASFPLPDSSSE---RARSEV 118
           H N N    +L  L DP SP   HF  QQ  S+K  +T++ SFP    + E   +A   V
Sbjct: 295 HMNRNF---LLKVLQDPGSPLARHFQSQQSFSSK-TMTKAGSFPTHGINREDHNKAFDPV 350

Query: 119 ISNASLPKRQGSLCFGSKTQKLVQLKSSKVFCEEAALEWRLNGNSNINEATIVRNVNSSS 178
                +P    S+                      A E R +G   +NE  +      SS
Sbjct: 351 GDVDKIPMSPPSI----------------------AAEHRADGIQKMNETVLKLGDEDSS 388

Query: 179 GYSQCQKRKE----IKHVKNLKQKIELVTGENKREKLRVTNDAIIDKLPQGH----EISD 230
           G    +KR +    IK  K+L+QKI+ V  ENK EK R+T DA++DK+P+ +    ++ D
Sbjct: 389 GSGYARKRGKNQVVIKRFKDLRQKIKHVINENKNEKHRITMDAVLDKVPRKYGFSKDLRD 448

Query: 231 XXXXXXXXXXXXPSCN--EXXXXXXXXXXWSLPEPLESYSKLHEKRFKTEAR-FPQSKKP 287
                        + N  E           SL   L+ Y +L+E  F+ EA+    S+K 
Sbjct: 449 DIFEHLKGNSAAKNNNKAEGTKLKQITRASSLCGSLDRYLQLYECSFQREAKNSSNSEKS 508

Query: 288 KLRTEKAHSP------FRIRILSLPDLQSFSYGDGTMISESGSYQQKRLDLNVHSRNQVQ 341
           K+  E++  P      F  RILSLP ++  +               K  DL V S  + Q
Sbjct: 509 KMELEESALPSKRAPKFLGRILSLPQMKFHAL--------------KIDDLTVQSIEEEQ 554

Query: 342 THVENL--IQENLVSEGENDLVVRSNIMGSGSDCSSKINDNLGIIVNDFGDSSLRKDGTS 399
             ++N+  I E+     E++ + ++      S   ++   +  I   D            
Sbjct: 555 DGLDNISEISEDHSQSSEHETLDQTMDASEDSPVDAETEQDREISTLD------------ 602

Query: 400 NDQDSGAIKEDKAAIAESDSKSKPGPVDRLDNVAEQQEANMDPLGTTEKAKKVKILNNEI 459
                  ++ +  ++ ES S+  P  V  +D        ++     TE     K L+ E+
Sbjct: 603 -------VEHETRSLKES-SEESPNNVSTVDIDENASVFDISRDLDTETVSTSKQLDEEV 654

Query: 460 PQFKVDTRHKDEFNYVKYVLEVSGLTGNDCLSAWHSSDQPVDPLLYEE--------MEGD 511
               +D + K +FNYV+ +LE+SG    + LS W    QP+DPL+YEE        M  D
Sbjct: 655 --LNIDAQDKVKFNYVRDILEISGFNAPESLSMWQLDYQPLDPLVYEEVTTTTTGCMFQD 712

Query: 512 PEFCT-----GGQCNHYVLFDLINESLLDIYGRSYNCCYNXXXXXXXXXXXIHPMP-GCH 565
           PE C+     GG CNH +LFDLINE L++IY RS    Y+           IHPMP G  
Sbjct: 713 PE-CSRNEEEGGNCNHLLLFDLINEVLIEIYERS----YHYYPKPLSSLCKIHPMPVGYS 767

Query: 566 IVSKVWARMSRSLCLR-FRGGQTVDDHVGRDLAKLDELVNLQFFAESVGLEVEDLIF 621
           ++ +VW R+S  L  + +   Q+ D  + RDL++ D  ++LQF +E VG+EVEDLIF
Sbjct: 768 VLKEVWVRISCYLRYKPYDEQQSFDKVMSRDLSRDDGWMDLQFESECVGIEVEDLIF 824


>AT5G02390.2 | Symbols:  | Protein of unknown function (DUF3741) |
           chr5:508834-511710 REVERSE LENGTH=751
          Length = 751

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 216/509 (42%), Gaps = 98/509 (19%)

Query: 62  HFNINMKSDILTFLHDPVSPTIYHFHKQQMRSAKMALTRSASFPLPDSSSE---RARSEV 118
           H N N    +L  L DP SP   HF  QQ  S+K  +T++ SFP    + E   +A   V
Sbjct: 295 HMNRNF---LLKVLQDPGSPLARHFQSQQSFSSK-TMTKAGSFPTHGINREDHNKAFDPV 350

Query: 119 ISNASLPKRQGSLCFGSKTQKLVQLKSSKVFCEEAALEWRLNGNSNINEATIVRNVNSSS 178
                +P    S+                      A E R +G   +NE  +      SS
Sbjct: 351 GDVDKIPMSPPSI----------------------AAEHRADGIQKMNETVLKLGDEDSS 388

Query: 179 GYSQCQKRKE----IKHVKNLKQKIELVTGENKREKLRVTNDAIIDKLPQGH----EISD 230
           G    +KR +    IK  K+L+QKI+ V  ENK EK R+T DA++DK+P+ +    ++ D
Sbjct: 389 GSGYARKRGKNQVVIKRFKDLRQKIKHVINENKNEKHRITMDAVLDKVPRKYGFSKDLRD 448

Query: 231 XXXXXXXXXXXXPSCN--EXXXXXXXXXXWSLPEPLESYSKLHEKRFKTEAR-FPQSKKP 287
                        + N  E           SL   L+ Y +L+E  F+ EA+    S+K 
Sbjct: 449 DIFEHLKGNSAAKNNNKAEGTKLKQITRASSLCGSLDRYLQLYECSFQREAKNSSNSEKS 508

Query: 288 KLRTEKAHSP------FRIRILSLPDLQSFSYGDGTMISESGSYQQKRLDLNVHSRNQVQ 341
           K+  E++  P      F  RILSLP ++  +               K  DL V S  + Q
Sbjct: 509 KMELEESALPSKRAPKFLGRILSLPQMKFHAL--------------KIDDLTVQSIEEEQ 554

Query: 342 THVENL--IQENLVSEGENDLVVRSNIMGSGSDCSSKINDNLGIIVNDFGDSSLRKDGTS 399
             ++N+  I E+     E++ + ++      S   ++   +  I   D            
Sbjct: 555 DGLDNISEISEDHSQSSEHETLDQTMDASEDSPVDAETEQDREISTLD------------ 602

Query: 400 NDQDSGAIKEDKAAIAESDSKSKPGPVDRLDNVAEQQEANMDPLGTTEKAKKVKILNNEI 459
                  ++ +  ++ ES S+  P  V  +D        ++     TE     K L+ E+
Sbjct: 603 -------VEHETRSLKES-SEESPNNVSTVDIDENASVFDISRDLDTETVSTSKQLDEEV 654

Query: 460 PQFKVDTRHKDEFNYVKYVLEVSGLTGNDCLSAWHSSDQPVDPLLYEE--------MEGD 511
               +D + K +FNYV+ +LE+SG    + LS W    QP+DPL+YEE        M  D
Sbjct: 655 --LNIDAQDKVKFNYVRDILEISGFNAPESLSMWQLDYQPLDPLVYEEVTTTTTGCMFQD 712

Query: 512 PEFCT-----GGQCNHYVLFDLINESLLD 535
           PE C+     GG CNH +LFDLINE  ++
Sbjct: 713 PE-CSRNEEEGGNCNHLLLFDLINEGFVE 740


>AT1G07620.1 | Symbols: ATOBGM | GTP-binding protein Obg/CgtA |
           chr1:2344556-2346374 REVERSE LENGTH=552
          Length = 552

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 39/240 (16%)

Query: 406 AIKEDKAAIAESDSKSKPGPVDRLDNVAEQQEANMDPLGTTEKAKKVKILNNEIPQ---- 461
           A KE+K  + E   +S+   +D  +    QQE +  P  T + A+K + L   +PQ    
Sbjct: 333 AEKEEKYEVQEE--RSQENHLDSSNQRILQQEPDSVP-STNKTAEKTETL---LPQGLGL 386

Query: 462 -----FKVDTRHKDE-FNYVKYVLEVSGLTGN-DCLSAWHSSDQPVDPLLYEEMEGDPEF 514
                +K +   +D  F YVK VL+VSG   N D    W+S +QP++P L  E++   E 
Sbjct: 387 SSLEIYKHEEEDEDAYFCYVKKVLKVSGFLENKDNEEKWYSEEQPLNPSLLYELDIQEEE 446

Query: 515 CTGGQCNHYVLFDLINESLLDIYGRSYNCCYNXXXXXXXXXXXIHPMPGCHIVSKVWARM 574
                 +  +LFDL+NE++++    S                   P  G   + +VW R+
Sbjct: 447 TVN---DKELLFDLVNEAIVETQNHS-----------QIYFPKTFPY-GKRYLDEVWGRV 491

Query: 575 SRSLCLRFRGGQ----TVDDHVGRDL-AKLDELVNLQFFAESVGLEVEDLIFQELLKEIV 629
             SL     G +    ++DD VGRDL  K D  +NLQ  +E + LE+EDLIF ++L E++
Sbjct: 492 EWSLS--GLGAENRDRSLDDIVGRDLLTKSDGWMNLQGESEWLTLELEDLIFDDVLDELL 549