Miyakogusa Predicted Gene
- Lj0g3v0181949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0181949.1 Non Chatacterized Hit- tr|I3SH51|I3SH51_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99,0,no
description,NULL; coiled-coil,NULL; Translational machinery
components,NULL; Ribosomal_L18p,Ribos,CUFF.11613.1
(302 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25520.1 | Symbols: ATL5, PGY3, OLI5, RPL5A | ribosomal prote... 432 e-121
AT5G39740.2 | Symbols: RPL5B | ribosomal protein L5 B | chr5:159... 432 e-121
AT5G39740.1 | Symbols: OLI7, RPL5B | ribosomal protein L5 B | ch... 432 e-121
AT3G25520.2 | Symbols: ATL5 | ribosomal protein L5 | chr3:926957... 268 3e-72
>AT3G25520.1 | Symbols: ATL5, PGY3, OLI5, RPL5A | ribosomal protein
L5 | chr3:9269573-9271327 REVERSE LENGTH=301
Length = 301
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/290 (72%), Positives = 239/290 (82%)
Query: 3 VFIKAQKPRAYXXXXXXXXXXXXEGKTDYRARIRLINQDKNKYNTAKYRFVVRSTNKDII 62
VF+K+ K AY +GKTDYRARIRLINQDKNKYNT KYRFVVR TNKDI+
Sbjct: 2 VFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIV 61
Query: 63 AQIISSTIAGDIVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEG 122
AQI+S++IAGDIV A+AY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMD+EYEG
Sbjct: 62 AQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEG 121
Query: 123 NVEATGEDYSVEPAETRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAG 182
NVEATGED+SVEP ++RRPFRALLDVGLI+TTTGNRVF IPHSDKRFAG
Sbjct: 122 NVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAG 181
Query: 183 FDKEKKELDAEVHRKYVFGGHVAAYMKTLIEDEPEKYQSHFSEYIKRGIEADGLEELYKK 242
F KE K+LDAE+HR Y++GGHV+ YMK L EDEPEK Q+HFS YIK+G+EA+ +EELYKK
Sbjct: 182 FHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKK 241
Query: 243 VHAAIRADPTSKKSEKPQPKEHKRDNLKKRTYDERKNKLIARLQALNSAA 292
VHAAIRADP KK+ KP PK+HKR NLKK TY+ERKNKLI R++ALN A
Sbjct: 242 VHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAG 291
>AT5G39740.2 | Symbols: RPL5B | ribosomal protein L5 B |
chr5:15903484-15905185 FORWARD LENGTH=301
Length = 301
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 239/290 (82%)
Query: 3 VFIKAQKPRAYXXXXXXXXXXXXEGKTDYRARIRLINQDKNKYNTAKYRFVVRSTNKDII 62
VF+K+ K AY +GKTDYRARIRLINQDKNKYNT KYRFVVR TNKDI+
Sbjct: 2 VFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIV 61
Query: 63 AQIISSTIAGDIVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEG 122
AQI+S++IAGDIV A+AY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMD+EYEG
Sbjct: 62 AQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEG 121
Query: 123 NVEATGEDYSVEPAETRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAG 182
NVEATGED+SVEP ++RRPFRALLDVGLI+TTTGNRVF IPHSDKRFAG
Sbjct: 122 NVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAG 181
Query: 183 FDKEKKELDAEVHRKYVFGGHVAAYMKTLIEDEPEKYQSHFSEYIKRGIEADGLEELYKK 242
F KE K+LDAE+HR Y++GGHV+ YMK L EDEPEK Q+HFS YIK+G+EA+ +EE+YKK
Sbjct: 182 FHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKK 241
Query: 243 VHAAIRADPTSKKSEKPQPKEHKRDNLKKRTYDERKNKLIARLQALNSAA 292
VHAAIRA+P KK+EK PKEHKR NLKK TY+ERKNKLI R++ALN A
Sbjct: 242 VHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAG 291
>AT5G39740.1 | Symbols: OLI7, RPL5B | ribosomal protein L5 B |
chr5:15903365-15905185 FORWARD LENGTH=301
Length = 301
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 239/290 (82%)
Query: 3 VFIKAQKPRAYXXXXXXXXXXXXEGKTDYRARIRLINQDKNKYNTAKYRFVVRSTNKDII 62
VF+K+ K AY +GKTDYRARIRLINQDKNKYNT KYRFVVR TNKDI+
Sbjct: 2 VFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIV 61
Query: 63 AQIISSTIAGDIVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEG 122
AQI+S++IAGDIV A+AY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMD+EYEG
Sbjct: 62 AQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEG 121
Query: 123 NVEATGEDYSVEPAETRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAG 182
NVEATGED+SVEP ++RRPFRALLDVGLI+TTTGNRVF IPHSDKRFAG
Sbjct: 122 NVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAG 181
Query: 183 FDKEKKELDAEVHRKYVFGGHVAAYMKTLIEDEPEKYQSHFSEYIKRGIEADGLEELYKK 242
F KE K+LDAE+HR Y++GGHV+ YMK L EDEPEK Q+HFS YIK+G+EA+ +EE+YKK
Sbjct: 182 FHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKK 241
Query: 243 VHAAIRADPTSKKSEKPQPKEHKRDNLKKRTYDERKNKLIARLQALNSAA 292
VHAAIRA+P KK+EK PKEHKR NLKK TY+ERKNKLI R++ALN A
Sbjct: 242 VHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAG 291
>AT3G25520.2 | Symbols: ATL5 | ribosomal protein L5 |
chr3:9269573-9270434 REVERSE LENGTH=190
Length = 190
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 148/179 (82%)
Query: 114 LEMDEEYEGNVEATGEDYSVEPAETRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXI 173
LEMD+EYEGNVEATGED+SVEP ++RRPFRALLDVGLI+TTTGNRVF I
Sbjct: 2 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 61
Query: 174 PHSDKRFAGFDKEKKELDAEVHRKYVFGGHVAAYMKTLIEDEPEKYQSHFSEYIKRGIEA 233
PHSDKRFAGF KE K+LDAE+HR Y++GGHV+ YMK L EDEPEK Q+HFS YIK+G+EA
Sbjct: 62 PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 121
Query: 234 DGLEELYKKVHAAIRADPTSKKSEKPQPKEHKRDNLKKRTYDERKNKLIARLQALNSAA 292
+ +EELYKKVHAAIRADP KK+ KP PK+HKR NLKK TY+ERKNKLI R++ALN A
Sbjct: 122 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAG 180