Miyakogusa Predicted Gene

Lj0g3v0181439.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181439.2 Non Chatacterized Hit- tr|G7IWJ3|G7IWJ3_MEDTR
tRNA/rRNA methyltransferase, putative OS=Medicago trun,84.91,8e-17,no
description,NULL; SUBFAMILY NOT NAMED,NULL; RNA
METHYLTRANSFERASE,NULL,CUFF.11526.2
         (52 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26880.2 | Symbols:  | AGAMOUS-like 26 | chr5:9457950-9459190...    84   2e-17

>AT5G26880.2 | Symbols:  | AGAMOUS-like 26 | chr5:9457950-9459190
           REVERSE LENGTH=263
          Length = 263

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 43/52 (82%)

Query: 1   MVETYVRCLNLSVSVGIALYEASRQLNYEQFQIPSETCIPTEETLITEDILA 52
           MVETYVRCLNLSVSVGIALYEASRQLNYEQ +   + C+  EE L+TEDI A
Sbjct: 212 MVETYVRCLNLSVSVGIALYEASRQLNYEQIECAPQGCVNGEEPLLTEDIFA 263