Miyakogusa Predicted Gene

Lj0g3v0181439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181439.1 Non Chatacterized Hit- tr|I3S4V5|I3S4V5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.23,0,SpoU_methylase,tRNA/rRNA methyltransferase, SpoU; no
description,NULL; SUBFAMILY NOT NAMED,NULL; RNA,CUFF.11526.1
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26880.2 | Symbols:  | AGAMOUS-like 26 | chr5:9457950-9459190...   336   1e-92
AT5G26880.1 | Symbols: AGL26 | AGAMOUS-like 26 | chr5:9457301-94...   286   1e-77

>AT5G26880.2 | Symbols:  | AGAMOUS-like 26 | chr5:9457950-9459190
           REVERSE LENGTH=263
          Length = 263

 Score =  336 bits (861), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 165/259 (63%), Positives = 199/259 (76%), Gaps = 7/259 (2%)

Query: 7   KSLNMGNPFRFRSKVSLFRPLFTSLHFK-----PITHFSPRLCSFCSLN-GSAETSKEGS 60
           +S+     F  RS   LF P  +  H K      I  FS ++ S      G  E+ K+  
Sbjct: 6   RSVIASRTFHLRSSGRLF-PSLSLTHLKGKLSLSINSFSSKIQSHALRGVGIGESDKKNP 64

Query: 61  LPQGVGGAVKEASHSRILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGYKVDDTKL 120
           LP+G G  VKE + S++L VVLVSPQIPGNTGCIARTCAASAVGLHLVGPLG++VDD ++
Sbjct: 65  LPRGAGEGVKEDARSKLLHVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDARV 124

Query: 121 KRAGLDYWPYVVVKIHNSWEDFRDYFRQQEGEKRLLAFTKRGTKIHSEFSYKKGDYLLFG 180
           KRAGLDYWP+VVVK H+SW +F++YFR QEGEKR++AFTKRGT+IHS+FSY+ GDYLLFG
Sbjct: 125 KRAGLDYWPFVVVKAHSSWAEFQEYFRLQEGEKRMIAFTKRGTRIHSDFSYRSGDYLLFG 184

Query: 181 AETTGLPPEALLDCKTKPFGGGTLKIPMVETYVRCLNLSVSVGIALYEASRQLNYEQFQI 240
           +ET+GLPPEAL DC  +P+GGGTL+IPMVETYVRCLNLSVSVGIALYEASRQLNYEQ + 
Sbjct: 185 SETSGLPPEALSDCNHEPYGGGTLRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQIEC 244

Query: 241 PSETCIPTEETLITEDILA 259
             + C+  EE L+TEDI A
Sbjct: 245 APQGCVNGEEPLLTEDIFA 263


>AT5G26880.1 | Symbols: AGL26 | AGAMOUS-like 26 |
           chr5:9457301-9459190 REVERSE LENGTH=368
          Length = 368

 Score =  286 bits (731), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 138/220 (62%), Positives = 169/220 (76%), Gaps = 7/220 (3%)

Query: 7   KSLNMGNPFRFRSKVSLFRPLFTSLHFK-----PITHFSPRLCSFCSLN-GSAETSKEGS 60
           +S+     F  RS   LF P  +  H K      I  FS ++ S      G  E+ K+  
Sbjct: 6   RSVIASRTFHLRSSGRLF-PSLSLTHLKGKLSLSINSFSSKIQSHALRGVGIGESDKKNP 64

Query: 61  LPQGVGGAVKEASHSRILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGYKVDDTKL 120
           LP+G G  VKE + S++L VVLVSPQIPGNTGCIARTCAASAVGLHLVGPLG++VDD ++
Sbjct: 65  LPRGAGEGVKEDARSKLLHVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDARV 124

Query: 121 KRAGLDYWPYVVVKIHNSWEDFRDYFRQQEGEKRLLAFTKRGTKIHSEFSYKKGDYLLFG 180
           KRAGLDYWP+VVVK H+SW +F++YFR QEGEKR++AFTKRGT+IHS+FSY+ GDYLLFG
Sbjct: 125 KRAGLDYWPFVVVKAHSSWAEFQEYFRLQEGEKRMIAFTKRGTRIHSDFSYRSGDYLLFG 184

Query: 181 AETTGLPPEALLDCKTKPFGGGTLKIPMVETYVRCLNLSV 220
           +ET+GLPPEAL DC  +P+GGGTL+IPMVETYVRCLNLS+
Sbjct: 185 SETSGLPPEALSDCNHEPYGGGTLRIPMVETYVRCLNLSI 224