Miyakogusa Predicted Gene

Lj0g3v0181409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181409.1 tr|H0YDV4|H0YDV4_HUMAN Probable dolichyl
pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase,32.66,5e-19,seg,NULL; SUBFAMILY NOT
NAMED,NULL; DOLICHYL GLYCOSYLTRANSFERASE,Glycosyl transferase,
ALG6/ALG8; Al,CUFF.11576.1
         (211 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44660.1 | Symbols:  | ALG6, ALG8 glycosyltransferase family ...   256   8e-69

>AT2G44660.1 | Symbols:  | ALG6, ALG8 glycosyltransferase family |
           chr2:18420832-18422827 REVERSE LENGTH=506
          Length = 506

 Score =  256 bits (654), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 130/207 (62%), Positives = 148/207 (71%), Gaps = 18/207 (8%)

Query: 2   TFIMVLLALSPCLFKAWKNPQPKMICRWVAYAYTCGFLFGWHVHEKASLHFVIPLAIVAA 61
           TF MVLLA+SPCL KAWK P   ++ RWVAYAYTCGFLFGWHVHEKASLHF IPLAIVA 
Sbjct: 317 TFAMVLLAISPCLIKAWKKPHSGLVARWVAYAYTCGFLFGWHVHEKASLHFTIPLAIVAV 376

Query: 62  QTLEDAKHYFLLSIVSCYSLFPLLFEAQEYPIKVXXXXXHSILMWSGFSAQFHDGIETRA 121
           Q+LEDAKHYFL+SIVSCYSL+PLL+E QEYPIKV     HS++MW GF+AQ+ D      
Sbjct: 377 QSLEDAKHYFLVSIVSCYSLYPLLYEPQEYPIKVLLLLLHSVVMWLGFAAQYTD------ 430

Query: 122 SNARPKKKVDQFGSKGSSGEPVKNEGFVISWIEMIYLVGLVVVEIWGQFLHPLLLGDKLA 181
                KK+  +  SK           F I   E  YL+GL++VEI  QFLHP  LGDKL 
Sbjct: 431 -YKAQKKETSEIKSK-----------FRIGCFEKSYLMGLIIVEIVSQFLHPYFLGDKLP 478

Query: 182 FAPLMLVSIYCAFGIMYSWIWQLRSIV 208
           F PLML+S YC  GIMYSWIWQLR I+
Sbjct: 479 FLPLMLISTYCTVGIMYSWIWQLRKIL 505