Miyakogusa Predicted Gene

Lj0g3v0180959.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0180959.1 Non Chatacterized Hit- tr|B9F642|B9F642_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,57.29,5e-17,seg,NULL; WPP,WPP domain,CUFF.11492.1
         (226 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47200.1 | Symbols: WPP2 | WPP domain protein 2 | chr1:172981...   120   7e-28
AT5G43070.1 | Symbols: WPP1 | WPP domain protein 1 | chr5:172892...   119   2e-27
AT5G27940.1 | Symbols: WPP3 | WPP domain protein 3 | chr5:997446...    85   4e-17
AT3G63130.2 | Symbols: RANGAP1 | RAN GTPase activating protein 1...    65   4e-11
AT3G63130.1 | Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activatin...    65   4e-11
AT5G19320.1 | Symbols: RANGAP2 | RAN GTPase activating protein 2...    58   6e-09

>AT1G47200.1 | Symbols: WPP2 | WPP domain protein 2 |
           chr1:17298181-17298723 REVERSE LENGTH=180
          Length = 180

 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 70/91 (76%)

Query: 93  GISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXX 152
           GIS  IWPPTQ+TRDAV+NRLIETLST S+LSKRYGT+ +D+A+  A+ IE         
Sbjct: 55  GISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASN 114

Query: 153 XXXXDTDGIEILQVYSKEISKRMLDSVKSRA 183
               D DGI+IL++YSKEISKRML+SVK+R+
Sbjct: 115 AVSSDDDGIKILELYSKEISKRMLESVKARS 145


>AT5G43070.1 | Symbols: WPP1 | WPP domain protein 1 |
           chr5:17289259-17289726 REVERSE LENGTH=155
          Length = 155

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/95 (60%), Positives = 71/95 (74%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXX 153
           IS  IWPPTQ+TRDAVINRLIETLST S+LSKR+G++ ++EAS+ A+ IE          
Sbjct: 40  ISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASAT 99

Query: 154 XXXDTDGIEILQVYSKEISKRMLDSVKSRATTGSP 188
              D DGIEIL+ YSKEISKRML+SVK+++   SP
Sbjct: 100 VFGDDDGIEILKAYSKEISKRMLESVKAKSNVASP 134


>AT5G27940.1 | Symbols: WPP3 | WPP domain protein 3 |
           chr5:9974467-9974940 FORWARD LENGTH=157
          Length = 157

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 93  GISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXX 152
           GI FS+WPP Q++RD V+N +I+TLST S+LS +YGT+  +EASA A+ IE         
Sbjct: 48  GILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASR 107

Query: 153 XXXXDTDGIEILQVYSKEISKRMLDSVKSR 182
                +DGI+ L+VY  E S+RM++S + R
Sbjct: 108 FVS--SDGIKNLEVYGIETSERMIESAEVR 135


>AT3G63130.2 | Symbols: RANGAP1 | RAN GTPase activating protein 1 |
           chr3:23325108-23326715 FORWARD LENGTH=535
          Length = 535

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXX 153
           +S  +WPP++ TR  ++ R+ + ++TPS+ S++YG +  +EA   A++IE          
Sbjct: 13  LSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKH 72

Query: 154 XXX--DTDGIEILQVYSKEISKRMLDSVK 180
                D DG   + VY+KE SK MLD +K
Sbjct: 73  FQNEPDGDGTSAVHVYAKESSKLMLDVIK 101


>AT3G63130.1 | Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activating
           protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535
          Length = 535

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXX 153
           +S  +WPP++ TR  ++ R+ + ++TPS+ S++YG +  +EA   A++IE          
Sbjct: 13  LSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKH 72

Query: 154 XXX--DTDGIEILQVYSKEISKRMLDSVK 180
                D DG   + VY+KE SK MLD +K
Sbjct: 73  FQNEPDGDGTSAVHVYAKESSKLMLDVIK 101


>AT5G19320.1 | Symbols: RANGAP2 | RAN GTPase activating protein 2 |
           chr5:6505310-6506947 REVERSE LENGTH=545
          Length = 545

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXX 153
            S  +WPP+  TR A+I R+    S+ ++ +++YG++  D+A+  A++IE          
Sbjct: 12  FSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQ 71

Query: 154 XXX--DTDGIEILQVYSKEISKRMLDSVK 180
                D DG   +Q+Y+KE SK +L+ +K
Sbjct: 72  FEREPDGDGGSAVQLYAKECSKLILEVLK 100