Miyakogusa Predicted Gene

Lj0g3v0180849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0180849.1 Non Chatacterized Hit- tr|F6HI07|F6HI07_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.68,5e-16,seg,NULL,CUFF.11485.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16550.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...    60   6e-10

>AT5G16550.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:5405526-5406641 FORWARD LENGTH=249
          Length = 249

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 77  ETLPEVLNRLVTDILFPGP--ADDASLLRRIKASVAGNAPLLPEASRNSASHVIVWTRRG 134
           ++L  ++   +  ILFP     D +S L R++ SVA N P L EAS  +   +++WTRRG
Sbjct: 49  KSLYSLICLTIGSILFPDSKTGDASSFLERVRNSVAENGPKLREASERTGREILLWTRRG 108

Query: 135 SPLRALLVISVRII 148
           S LRALLVI++  I
Sbjct: 109 SSLRALLVITMGTI 122