Miyakogusa Predicted Gene

Lj0g3v0179539.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0179539.1 tr|F2E9N2|F2E9N2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,57.83,2e-19,Rab subfamily
of small GTPases,Small GTPase superfamily, Rab type; SUBFAMILY NOT
NAMED,NULL; FAMILY ,25737_g.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA...   121   1e-28
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R...   108   8e-25
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R...   107   1e-24
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ...   103   2e-23
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:...    96   4e-21
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I...    92   5e-20
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F...    92   6e-20
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G...    92   9e-20
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E...    91   2e-19
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D...    89   9e-19
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo...    88   1e-18
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C...    85   1e-17
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB...    83   4e-17
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol...    82   9e-17
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel...    78   1e-15
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A...    77   3e-15
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ...    72   5e-14
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G...    72   8e-14
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B...    71   2e-13
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D...    71   2e-13
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A...    70   2e-13
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |...    69   5e-13
AT5G46025.1 | Symbols:  | Ras-related small GTP-binding family p...    68   1e-12
AT4G08190.1 | Symbols:  | P-loop containing nucleoside triphosph...    66   5e-12
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A...    64   2e-11
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B...    61   2e-10
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi...    55   1e-08
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi...    55   1e-08
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small...    54   3e-08
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom...    54   3e-08
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C...    53   4e-08
AT4G03156.1 | Symbols:  | small GTPase-related | chr4:1396002-13...    51   2e-07
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho...    49   5e-07
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R...    49   7e-07
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A...    49   8e-07
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A...    48   2e-06
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat...    47   3e-06
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom...    46   5e-06
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom...    46   6e-06
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi...    45   8e-06

>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
           GTPase homolog A2B | chr1:2276270-2277154 FORWARD
           LENGTH=214
          Length = 214

 Score =  121 bits (303), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/86 (73%), Positives = 73/86 (84%), Gaps = 3/86 (3%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           MMAGNKSDLNHLR+V+ ED ++LAEKE LSFLETSALEA N+EKAFQTIL +IY IIS+K
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 61  ALAAQEAASTTSLP-HGTTINVSNLS 85
           ALAAQEAA   +LP  GT IN+S+ S
Sbjct: 181 ALAAQEAAG--NLPGQGTAINISDSS 204


>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
           RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
           REVERSE LENGTH=217
          Length = 217

 Score =  108 bits (270), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 2/87 (2%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           MMAGNKSDLNHLR+V+ ED Q+LAEKE LSFLETSALEA NVEKAFQTIL +IY IIS+K
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 61  -ALAAQEAASTTSLP-HGTTINVSNLS 85
              A + AA+ +++P  GTTINV + S
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTS 207


>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
           RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
           LENGTH=217
          Length = 217

 Score =  107 bits (267), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 69/82 (84%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK+DL HLRAV++EDAQ+ AEKE LSF+ETSALEALNVEKAFQTIL ++Y+IIS+K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 61  ALAAQEAASTTSLPHGTTINVS 82
           ++++ +  +  ++  G TI+V+
Sbjct: 181 SISSDQTTANANIKEGQTIDVA 202


>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
           homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
          Length = 217

 Score =  103 bits (257), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/87 (65%), Positives = 69/87 (79%), Gaps = 2/87 (2%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           MMAGNK+DLNHLR+V+ ED Q LAE E LSFLETSALEA NVEKAFQT+L +IY IIS+K
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 61  -ALAAQEAASTTSLP-HGTTINVSNLS 85
              A + AA+ +++P  GTTINV + S
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTS 207


>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
           chr2:14337366-14338251 REVERSE LENGTH=218
          Length = 218

 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 63/82 (76%), Gaps = 1/82 (1%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK+DLNHLRA+S+E+ ++ AE+E+  F+ETSALEA+NVE AF  +L  IY+++S+K
Sbjct: 122 MLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKK 181

Query: 61  ALAAQEAASTTSLPHGTTINVS 82
           AL A +   TT+LP G  INV 
Sbjct: 182 ALDAGDDP-TTALPKGQMINVG 202


>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
           chr1:10036966-10037698 REVERSE LENGTH=218
          Length = 218

 Score = 92.4 bits (228), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 62/83 (74%), Gaps = 1/83 (1%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK+DL HLRA+S+E+A+  AE+E+  F+ETSALEA+NV+ AF  +L  IY+++S+K
Sbjct: 122 MLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKK 181

Query: 61  ALAAQEAASTTSLPHGTTINVSN 83
           AL A +   TT+LP G  INV  
Sbjct: 182 ALEAGD-DPTTALPKGQMINVGG 203


>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
           chr5:24484750-24485565 FORWARD LENGTH=217
          Length = 217

 Score = 92.4 bits (228), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 2/82 (2%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M  GNK+DL HLRAVS+EDA+  AE+E+  F+ETSALE++NVE AF  +L  IY+++SRK
Sbjct: 122 MFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRK 181

Query: 61  ALAAQEAASTTSLPHGTTINVS 82
           AL   +     +LP G TINV 
Sbjct: 182 ALDIGD--DPAALPKGQTINVG 201


>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
           chr3:5069239-5070025 FORWARD LENGTH=217
          Length = 217

 Score = 91.7 bits (226), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 2/82 (2%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK+DL HLRAVS+EDA+  AE+E+  F+ETSALEALNVE AF  +L  IY++ S+K
Sbjct: 122 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKK 181

Query: 61  ALAAQEAASTTSLPHGTTINVS 82
           AL   +    T+LP G +INV 
Sbjct: 182 ALDIGD--DHTTLPKGQSINVG 201


>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
           chr4:10183903-10185223 REVERSE LENGTH=217
          Length = 217

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 2/83 (2%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK+DL HLRAV +E+A++ +E+E++ F+ETSAL+A NVE+AF  +L  IY+++SRK
Sbjct: 122 MLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRK 181

Query: 61  ALAAQEAASTTSLPHGTTINVSN 83
           AL         SLP G TI++ N
Sbjct: 182 ALDG--TGDPMSLPKGQTIDIGN 202


>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
           chr3:3879495-3880437 REVERSE LENGTH=222
          Length = 222

 Score = 88.6 bits (218), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 2/81 (2%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL  LRAV +EDAQ  A++E+L F+ETSALEA NVE AF TIL +IY+IIS+K
Sbjct: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKK 183

Query: 61  ALAA--QEAASTTSLPHGTTI 79
           +L A   +A   +SL  GT I
Sbjct: 184 SLTADDDDADGNSSLLKGTRI 204


>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
           A1B | chr1:5787489-5789147 REVERSE LENGTH=216
          Length = 216

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNKSDL HL AV +ED ++ AE+ESL F+ETSALEA NVE AF  +L  IY+I S+K
Sbjct: 122 MLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKK 181

Query: 61  ALAAQEAASTTSLPHGTTINVSN 83
            + A E  +  S+P G  I V N
Sbjct: 182 QVEAGEDGN-ASVPKGEKIEVKN 203


>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
           chr5:18559318-18560639 FORWARD LENGTH=216
          Length = 216

 Score = 84.7 bits (208), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 60/83 (72%), Gaps = 3/83 (3%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNKSDL HL AV +EDA++ AEKESL F+ETSALEA NVE AF  +L  I+ I+S+K
Sbjct: 122 MLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKK 181

Query: 61  AL-AAQEAASTTSLPHGTTINVS 82
           A+ AA E+A+  S   G  I++ 
Sbjct: 182 AMEAASESANVPS--KGDKIDIG 202


>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
           GTPase homolog A1D | chr4:10320156-10321339 REVERSE
           LENGTH=214
          Length = 214

 Score = 82.8 bits (203), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 3/82 (3%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNKSDL HL AV +EDA++ AE ESL F+ETSALE+ NVE AF  +L  IY ++S+K
Sbjct: 122 MLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKK 181

Query: 61  ALAAQEAASTTSLP-HGTTINV 81
           A+ A E   + ++P  G  I+V
Sbjct: 182 AMEAGE--DSGNVPSKGEKIDV 201


>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
           A4C | chr5:19421533-19422473 REVERSE LENGTH=223
          Length = 223

 Score = 81.6 bits (200), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 3/86 (3%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK+DL  LRAV +EDA+  A++E+L F+ETSAL++ NVE +F T+L +IY+I+S+K
Sbjct: 124 MLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKK 183

Query: 61  ALAAQ---EAASTTSLPHGTTINVSN 83
            L A    E+   +SL  GT I V+ 
Sbjct: 184 NLVANEEGESGGDSSLLQGTKIVVAG 209


>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
           Ras-related small GTP-binding family protein |
           chr1:1951089-1952686 REVERSE LENGTH=216
          Length = 216

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 3/82 (3%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL HL AV +E+A+  AE+ESL F+ETSAL+A NVE AF  +L  I++I+S++
Sbjct: 122 MLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKR 181

Query: 61  ALAAQEAASTTSLP-HGTTINV 81
           ++       +  LP  G TINV
Sbjct: 182 SVDG--GGESADLPGKGETINV 201


>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
           chr5:26083437-26084550 FORWARD LENGTH=226
          Length = 226

 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 49/66 (74%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNKSDL   RA+ +EDA+  AEKE L FLETSA  A NVE AF T+L +I+ I+++K
Sbjct: 126 ILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKK 185

Query: 61  ALAAQE 66
           +LAA E
Sbjct: 186 SLAASE 191


>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
           GTPase homolog A5E | chr1:1748314-1749350 FORWARD
           LENGTH=261
          Length = 261

 Score = 72.4 bits (176), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL ++RAVS E+ + LAE+E L F+ETSAL++ NV+ AF+ ++ DIY  +SRK
Sbjct: 164 MLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 223

Query: 61  AL 62
            L
Sbjct: 224 QL 225


>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
           GTPase homolog A4B | chr4:18542722-18543779 FORWARD
           LENGTH=224
          Length = 224

 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 47/65 (72%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNKSDL   RAV +EDA+  AEKE L FLETSAL A NVE +F T++  IY  +++K
Sbjct: 126 ILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKK 185

Query: 61  ALAAQ 65
            LA++
Sbjct: 186 NLASE 190


>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
           chr3:2372485-2373482 REVERSE LENGTH=217
          Length = 217

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 47/62 (75%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL  +RAVS E+ + LAE+E L F+ETSAL+A NV+KAF+ ++ +I+  +SRK
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180

Query: 61  AL 62
            L
Sbjct: 181 LL 182


>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
           chr2:13473781-13474957 REVERSE LENGTH=219
          Length = 219

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 45/62 (72%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL  +RAVS E+ + LAE E L F+ETSAL++ NV+ AF+ ++ DIY  ISRK
Sbjct: 121 MLVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRK 180

Query: 61  AL 62
            L
Sbjct: 181 QL 182


>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
           chr5:19277596-19278366 REVERSE LENGTH=221
          Length = 221

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 50/66 (75%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNKSDL  LR VS+ + + LAE + L F+ETSAL++ NV  AF+T++ +IY I+SRK
Sbjct: 123 ILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182

Query: 61  ALAAQE 66
            +++QE
Sbjct: 183 VMSSQE 188


>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
           P-loop containing nucleoside triphosphate hydrolases
           superfamily protein | chr2:17929899-17930904 REVERSE
           LENGTH=214
          Length = 214

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 46/62 (74%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL  +RAVS E+ ++LAE E L F+ETSAL++ NV+ AF+ ++ +IY  ISRK
Sbjct: 121 MLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRK 180

Query: 61  AL 62
            L
Sbjct: 181 QL 182


>AT5G46025.1 | Symbols:  | Ras-related small GTP-binding family
           protein | chr5:18665255-18665596 REVERSE LENGTH=113
          Length = 113

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 43/58 (74%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIIS 58
           M+ GNKSDL+H R VS E+A++ AEKE L F+ETSAL+A NVE+ F  +L  IY  ++
Sbjct: 54  MLVGNKSDLDHRREVSMEEAKSFAEKEKLLFIETSALDATNVEECFTNVLTQIYNDVT 111


>AT4G08190.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:5174523-5175476
           REVERSE LENGTH=127
          Length = 127

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 38/46 (82%), Gaps = 3/46 (6%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAF 46
           MMAGNK+DLNHLR+V+ ED     + ESLSFLETSALEA NVEKAF
Sbjct: 85  MMAGNKADLNHLRSVAEEDGH---KTESLSFLETSALEATNVEKAF 127


>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
           chr1:27687033-27687987 FORWARD LENGTH=233
          Length = 233

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 1/75 (1%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNKSDL   R V  ++ + LAE E L FLETSALE +NVE+AF  ++  I+++++++
Sbjct: 122 VLVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR 181

Query: 61  ALAAQEAASTTSLPH 75
            +A++  ++  + PH
Sbjct: 182 -IASENKSNGAATPH 195


>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
           chr1:6265416-6266659 REVERSE LENGTH=229
          Length = 229

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 43/60 (71%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNKSDL   R V  E+ + LAE E L FLETSALE  NVE+AF +++  I++++++K
Sbjct: 122 VLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181


>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
           2 | chr4:16987118-16988839 REVERSE LENGTH=211
          Length = 211

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL H RAVS E+ Q  A++  L FLE SA  A NVE+AF      I Q I   
Sbjct: 115 MLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDG 174

Query: 61  ALAAQEAASTTSLPHGTT 78
                  +S   + +G T
Sbjct: 175 VFDVSNESSGIKIGYGRT 192


>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
           2 | chr4:16987118-16988587 REVERSE LENGTH=165
          Length = 165

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL H RAVS E+ Q  A++  L FLE SA  A NVE+AF      I Q I   
Sbjct: 69  MLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDG 128

Query: 61  ALAAQEAASTTSLPHGTT 78
                  +S   + +G T
Sbjct: 129 VFDVSNESSGIKIGYGRT 146


>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
           GTP-binding family protein | chr3:3709490-3711397
           REVERSE LENGTH=205
          Length = 205

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 5/74 (6%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNK+D+   + VS+E  + LA++  + FLETSA +++NVE+AF TI  +I     +K
Sbjct: 117 LLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEI-----KK 171

Query: 61  ALAAQEAASTTSLP 74
            + +Q  A+ TS P
Sbjct: 172 KMGSQTNANKTSGP 185


>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
           homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
          Length = 237

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 5/84 (5%)

Query: 1   MMAGNKSDLN-HLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQ--II 57
           M+ GNK+DL+   RAV +EDA   AE + L F E SAL   NV++AF  +L +I+   ++
Sbjct: 137 MLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVV 196

Query: 58  SRKALAAQEAASTTSLPHGTTINV 81
           SRKA+ + +  +T  L  G+ I+V
Sbjct: 197 SRKAMES-DGGATVKL-DGSRIDV 218


>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
           ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
           chr4:9644908-9646220 REVERSE LENGTH=211
          Length = 211

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 36/57 (63%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQII 57
           M+ GNK DL H RAVS+E+ +  A++  L F+E SA  A NVE+AF      IY+ I
Sbjct: 115 MLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKI 171


>AT4G03156.1 | Symbols:  | small GTPase-related |
          chr4:1396002-1396784 REVERSE LENGTH=77
          Length = 77

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 5/48 (10%)

Query: 4  GNKSDL-----NHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAF 46
          G   DL     + +R ++ ED Q LA+ ESLSFLETSALEA NVEKAF
Sbjct: 30 GGDDDLVLRRSHRIRTIAEEDGQILAKTESLSFLETSALEATNVEKAF 77


>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
           homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
          Length = 205

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 37/76 (48%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           M+ GNK DL   R VS+E+ +  A +  L F+E SA  A NVE+AF      IY+ I   
Sbjct: 115 MLIGNKCDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDG 174

Query: 61  ALAAQEAASTTSLPHG 76
            +        T  P G
Sbjct: 175 VVDEANEPGITPGPFG 190


>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
           | RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
          Length = 203

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 5/74 (6%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 60
           ++ GNKSDL   RA+  E A+  A++  + F+ETSA +A NVE+AF  +   I     ++
Sbjct: 117 LLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI-----KE 171

Query: 61  ALAAQEAASTTSLP 74
            +A+Q A +    P
Sbjct: 172 RMASQPAGNNARPP 185


>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
           ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
           family protein | chr4:10687441-10689449 REVERSE
           LENGTH=200
          Length = 200

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 33/48 (68%)

Query: 2   MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTI 49
           +AGNKSDL   R V++EDAQ  A++  L F+ETSA  A NV++ F  I
Sbjct: 120 LAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167


>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
           ATRAB-F2A, RAB-F2A | RAB homolog 1 |
           chr5:18244495-18246060 FORWARD LENGTH=200
          Length = 200

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 10/77 (12%)

Query: 2   MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKA 61
           +AGNK+DL   R VS+E+A+  A++ SL F+ETSA  A NV+        DI+  I+++ 
Sbjct: 120 LAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVK--------DIFYEIAKRL 171

Query: 62  LAAQEAASTTS--LPHG 76
              Q A + T   LP+G
Sbjct: 172 PRVQPAENPTGMVLPNG 188


>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
           small GTP-binding family protein |
           chr3:20318597-20320782 FORWARD LENGTH=202
          Length = 202

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 31/48 (64%)

Query: 2   MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTI 49
           + GNK+DL+  R V +ED   LAEK  + F+ETSA  A N+ + F+ I
Sbjct: 144 LVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEI 191


>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
           homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
          Length = 202

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAF 46
           ++ GNK DL   + VS+E A+  A++  + FLETSA  A NVE+AF
Sbjct: 117 LLVGNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAF 162


>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
           homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
          Length = 202

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 1   MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAF 46
           ++ GNK+DL   + VS+E A+  A++  + FLETSA  A NVE+AF
Sbjct: 117 LLVGNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAF 162


>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
           family protein | chr3:20318597-20320737 FORWARD
           LENGTH=193
          Length = 193

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 2   MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQT 48
           + GNK+DL+  R V +ED   LAEK  + F+ETSA  A N+ + F+ 
Sbjct: 144 LVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEC 190