Miyakogusa Predicted Gene
- Lj0g3v0179289.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0179289.1 Non Chatacterized Hit- tr|D8QU24|D8QU24_SELML
Putative uncharacterized protein OS=Selaginella
moelle,25.24,3e-18,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
rep,gene.g13850.t1.1
(598 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 345 6e-95
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 178 1e-44
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 5e-43
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 166 5e-41
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 4e-39
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 3e-38
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 8e-38
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 152 5e-37
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 1e-35
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 3e-35
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 8e-35
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 9e-35
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 9e-35
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 9e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 6e-34
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 7e-34
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 9e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 1e-33
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 3e-31
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 8e-31
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 131 1e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 125 1e-28
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 124 2e-28
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 3e-26
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 6e-26
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 114 2e-25
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 114 2e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 112 6e-25
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 111 2e-24
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 110 3e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 3e-24
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 109 7e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 102 7e-22
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 2e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 96 5e-20
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 96 8e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 4e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 5e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 6e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 71 2e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 66 6e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 66 9e-11
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 65 2e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 63 5e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 63 6e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 1e-09
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 3e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 60 4e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 60 5e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 58 1e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 4e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 56 8e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 56 8e-08
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 55 1e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 55 2e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 54 3e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 54 4e-07
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 54 4e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 1e-06
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 52 2e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 50 4e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 5e-06
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 50 5e-06
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 50 6e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 49 9e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 345 bits (884), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 214/566 (37%), Positives = 305/566 (53%), Gaps = 76/566 (13%)
Query: 49 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
++MLE +F TY+ +I FC ID A TL +M KG P+VVTYN+L+
Sbjct: 194 KEMLESQVSPNVF----TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
YC+ +D +LR+MA +GL P++ SYN VI+ C +G D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
TY++L++ C E +A + EMLR G++P +TYT L+++ C G +A D
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 229 EMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLD 261
+M +G P+ T GFSP++VTYNALI+G C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 262 RVEEALEILRGMPEMGLSPDAVCYSTVISG------------LKIETEDKAIWWLDEDTY 309
++E+A+ +L M E GLSPD V YSTV+SG +K E +K I D TY
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP-DTITY 488
Query: 310 DSLMDSLS-----------YED-----------TYSSVMNDYLAEGNMQRALQLDHDMSR 347
SL+ YE+ TY++++N Y EG++++ALQL ++M
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 407
G L V YSVLINGL+K++RTREAKR LL + + S+PS Y L+ENCSN EFK
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE--SVPSDVTYHTLIENCSNIEFK 606
Query: 408 SLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKA 466
S+V L+K + M+ + +A +ML G+N K DG YN++I HCR+ ++ KA
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESML-------GKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 467 YNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEI 526
Y +Y EMV G H +V+AL+ AL + NE++ VI + LRSC LS++EQ KVL EI
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 527 NVTKSEIYALLDVLAEMAMDSLLLDG 552
N + + +LDVLAEMA D L +G
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNG 745
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 192/355 (54%), Gaps = 21/355 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+C+ G + A + L+ M+ +GL +ERTY++++ F ++ A+ +L EM GFSPS
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTYN+L+ +C ++ A+ +L M E+GLSPDV SY+ V+S FC
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V+KGI PD TYSSL++ C ++R EA DL+ EMLR G+ PDE TYT L+NA C+ G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ KA LH+EM+ KG LPD +VTY+ LI+GL R EA +L +
Sbjct: 535 DLEKALQLHNEMVEKGVLPD--------VVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 279 SPDAVCYSTVISGL-KIETED----------KAIWWLDEDTYDSLMDSLSYED--TYSSV 325
P V Y T+I IE + K + + ++S++ D Y+ +
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 326 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 380
++ + G++++A L +M + G+L V L+ LHK+ + E ++++
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 195/454 (42%), Gaps = 98/454 (21%)
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
++ +V +Y R +DKA+ I+ G P V SYN V+
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL-------------------- 176
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
DA S ++ +S A ++F+EML VSP+ TY L+ C G
Sbjct: 177 ------DATIRS--------KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
A L D+M KG LP+ +VTYN LI G C L ++++ ++LR M GL P+
Sbjct: 223 VALTLFDKMETKGCLPN--------VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 282 AVCYSTVISGLKIETEDKAI-----------WWLDEDTYDSLMDSLSYED---------- 320
+ Y+ VI+GL E K + + LDE TY++L+ E
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 321 ------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
TY+S+++ GNM RA++ M G + Y+ L++G +K
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 369 RTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAAT 427
EA R L + +GF PS Y+ L+ +C + + + +++D + LS D +
Sbjct: 395 YMNEAYRVLREMNDNGF--SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 428 AHTTM------------LHLKNK-TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 474
T + L +K + + K D Y+ LI C +A ++Y EM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 475 HYGHAPHMFSVLALISA--LDDD-----RMYNEM 501
G P F+ ALI+A ++ D +++NEM
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 231/514 (44%), Gaps = 39/514 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+C+ GRI EA +L +M+ KG D +YS+V+ +C ++D L+ M KG P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
Y S++ CR + +A M +G+ PD Y +I FC
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ I PD TY++++ C + EA LF EM G+ PD +T+T L+N C G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
AF +H+ MI G SP +VTY LI GLC ++ A E+L M ++GL
Sbjct: 436 HMKDAFRVHNHMIQ--------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLAEGNMQ 336
P+ Y+++++GL K ++A+ + E L D++ TY+++M+ Y G M
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV----TYTTLMDAYCKSGEMD 543
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 396
+A ++ +M G + V ++VL+NG + ++ L ++ + G P+ T ++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNATTFNS 601
Query: 397 LLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
L++ C + K+ + KD R + D T Y L+
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT----------------------YENLVK 639
Query: 456 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLS 515
HC++ N+ +A+ ++ EM G + + + LI + + E V + R +
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 516 DSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLL 549
D E S+ ++D + E+ + L+
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 172/411 (41%), Gaps = 42/411 (10%)
Query: 117 KAVGILRAMAERGLSPDVDSYN---RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 173
+A + M GL VDS N +SK C V G+ + A+Y+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV--GVCWNVASYN 250
Query: 174 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 233
++ +C R+ EA L M G +PD ++Y+ ++N C GE K + L + M K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 234 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
G P+ Y ++I LC + ++ EA E M G+ PD V Y+T+I G
Sbjct: 311 GLKPN--------SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 294 IETEDKAI--WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
+ +A ++ + + D D L TY+++++ + G+M A +L H+M G
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVL----TYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 352 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLV 410
V ++ LING K ++A R ++ G P+ Y L++ C + S
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 411 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEH 457
EL+ + L + T ++ + L + E D Y L+ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 458 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYNEM 501
C+S + KA + EM+ G P + + L++ D +++ N M
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 125/330 (37%), Gaps = 42/330 (12%)
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGG----VSPDELTYTRLLNACCLVGEFTKA 223
D + + L L EA +F +ML G V + TRL C
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
F E+ G + +YN +IH +C L R++EA +L M G +PD +
Sbjct: 234 FREFPEV-----------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 284 CYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 343
YSTV++G E +W L E + SY Y S++ + A +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY--IYGSIIGLLCRICKLAEAEEAFS 340
Query: 344 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CS 402
+M R G L V Y+ LI+G K+ R A + + S P Y ++ C
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI--TPDVLTYTAIISGFCQ 398
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
+ +L + + L D+ T + LI +C++ +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVT----------------------FTELINGYCKAGH 436
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ A+ ++ M+ G +P++ + LI L
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 32 AFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
F SL K+ C + A + + M +G+ D +TY +++ C + A L EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
KGFS SV TY+ L+ + +R +A + M GL+ D + ++
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 231/514 (44%), Gaps = 39/514 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+C+ GRI EA +L +M+ KG D +YS+V+ +C ++D L+ M KG P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
Y S++ CR + +A M +G+ PD Y +I FC
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ I PD TY++++ C + EA LF EM G+ PD +T+T L+N C G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
AF +H+ MI G SP +VTY LI GLC ++ A E+L M ++GL
Sbjct: 436 HMKDAFRVHNHMIQ--------AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLAEGNMQ 336
P+ Y+++++GL K ++A+ + E L D++ TY+++M+ Y G M
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV----TYTTLMDAYCKSGEMD 543
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 396
+A ++ +M G + V ++VL+NG + ++ L ++ + G P+ T ++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI--APNATTFNS 601
Query: 397 LLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
L++ C + K+ + KD R + D T Y L+
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT----------------------YENLVK 639
Query: 456 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLS 515
HC++ N+ +A+ ++ EM G + + + LI + + E V + R +
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 516 DSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLL 549
D E S+ ++D + E+ + L+
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 172/411 (41%), Gaps = 42/411 (10%)
Query: 117 KAVGILRAMAERGLSPDVDSYN---RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 173
+A + M GL VDS N +SK C V G+ + A+Y+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV--GVCWNVASYN 250
Query: 174 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 233
++ +C R+ EA L M G +PD ++Y+ ++N C GE K + L + M K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 234 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
G P+ Y ++I LC + ++ EA E M G+ PD V Y+T+I G
Sbjct: 311 GLKPN--------SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 294 IETEDKAI--WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
+ +A ++ + + D D L TY+++++ + G+M A +L H+M G
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVL----TYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 352 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLV 410
V ++ LING K ++A R ++ G P+ Y L++ C + S
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 411 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEH 457
EL+ + L + T ++ + L + E D Y L+ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 458 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYNEM 501
C+S + KA + EM+ G P + + L++ D +++ N M
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 125/330 (37%), Gaps = 42/330 (12%)
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGG----VSPDELTYTRLLNACCLVGEFTKA 223
D + + L L EA +F +ML G V + TRL C
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
F E+ G + +YN +IH +C L R++EA +L M G +PD +
Sbjct: 234 FREFPEV-----------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 284 CYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 343
YSTV++G E +W L E + SY Y S++ + A +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY--IYGSIIGLLCRICKLAEAEEAFS 340
Query: 344 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CS 402
+M R G L V Y+ LI+G K+ R A + + S P Y ++ C
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI--TPDVLTYTAIISGFCQ 398
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
+ +L + + L D+ T + LI +C++ +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVT----------------------FTELINGYCKAGH 436
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ A+ ++ M+ G +P++ + LI L
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 32 AFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
F SL K+ C + A + + M +G+ D +TY +++ C + A L EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
KGFS SV TY+ L+ + +R +A + M GL+ D + ++
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 216/490 (44%), Gaps = 50/490 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
C+EGR+ +A ++ M + G F D+ T+++++ C + A ++ M+ +G+ P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
V TYNS++ C+ V +AV +L M R SP+ +YN +IS C
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
KGI PD T++SL++ LC+ + A +LF EM G PDE TY L+++ C
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G+ +A ++ +M ++G + +++TYN LI G C ++ EA EI M G
Sbjct: 449 GKLDEALNMLKQM--------ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 278 LSPDAVCYSTVISGL--KIETEDKAIWWLDEDTYDSLMDSLSYED------TYSSVMNDY 329
+S ++V Y+T+I GL ED A LMD + E TY+S++ +
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAA----------QLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
G++++A + M+ +G V Y LI+GL K R A + L I G P
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 390 SYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 449
+ N + L K + +A ML E D
Sbjct: 611 ----------HAYNPVIQGLFRKRK-------TTEAINLFREMLE-----QNEAPPDAVS 648
Query: 450 YNLLIFEHCRSHN-VHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNT 508
Y ++ C + +A + +E++ G P S+ L L M + ++N
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 509 LRSCNLSDSE 518
++ S+ E
Sbjct: 709 MQKARFSEEE 718
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 194/470 (41%), Gaps = 69/470 (14%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
GL D Y+ ++ + N + ++M G P V T+N L+ A CR + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 119 VGILRAMAERGLSPDVDSY-----------------------------------NRVISK 143
+ +L M GL PD ++ N ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 144 FCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 202
FC ++ G FPD T+++L+ LC + A ++ ML+ G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 203 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 262
D TY +++ C +GE +A + D+MI + SP VTYN LI LC ++
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITR--------DCSPNTVTYNTLISTLCKENQ 380
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 322
VEEA E+ R + G+ PD ++++I GL + + L E+ + + TY
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF--TY 438
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 382
+ +++ ++G + AL + M G S + Y+ LI+G K +TREA+ +
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 383 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGE 442
G +S S T Y+ L++ S +DAA M+ +G+
Sbjct: 499 HG-VSRNSVT-YNTLIDGLCKSR---------------RVEDAAQLMDQMI-----MEGQ 536
Query: 443 NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
K D YN L+ CR ++ KA ++ M G P + + LIS L
Sbjct: 537 -KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 196/406 (48%), Gaps = 24/406 (5%)
Query: 4 NVNIYNGMIRGFATAAGKSD--------SESKKVGEAFQSLKRLCREGRIPEAEQMLEVM 55
+V YN MI G+ A ++ S S V L+ LC G++ +A ++L+ M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
+ + D TY+ +I C + + A LL EM +G +P VVTYN LV C+ +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
D+A+ L M G P+V ++N ++ C + KG P T++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ LC + L A D+ +M + G P+ L+Y LL+ C + +A + M+ +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 236 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KI 294
PD IVTYN ++ LC +VE+A+EIL + G SP + Y+TVI GL K
Sbjct: 411 YPD--------IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 295 ETEDKAIWWLDE-DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 353
KAI LDE D D++ TYSS++ EG + A++ H+ R G +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTI----TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 354 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
V ++ ++ GL K +T A L+++ + G P+ T Y IL+E
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRG--CKPNETSYTILIE 562
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 224/507 (44%), Gaps = 63/507 (12%)
Query: 31 EAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
E+ L+++ R G + E + LE M G D +++I FC L K A +L +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
G P V+TYN ++ YC+ ++ A+ +L M+ +SPDV +YN ++ C
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 220
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
+ + +PD TY+ L+EA C + + A L EM G +PD +TY L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GF 243
+N C G +A ++M G P+ +T GF
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIW 302
SP++VT+N LI+ LC + A++IL MP+ G P+++ Y+ ++ G E + D+AI
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 303 WLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 360
+L+ ++ Y D TY++++ +G ++ A+++ + +S G + Y+ +
Sbjct: 401 YLER-----MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 361 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN-SEFKSLVELVKDYSMR 419
I+GL K +T +A + L + + P Y L+ S + ++ ++
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDL--KPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 420 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 479
+ +A T ++ ML L C+S +A + + M++ G
Sbjct: 514 GIRPNAVTFNSIMLGL----------------------CKSRQTDRAIDFLVFMINRGCK 551
Query: 480 PHMFSVLALISALDDDRMYNEMSWVIN 506
P+ S LI L + M E ++N
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLN 578
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 168/332 (50%), Gaps = 32/332 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+C+EGR+ EA + L M G + T++ ++ C+ + A LL++M+ KGFSPS
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVT+N L+ CR+ + +A+ IL M + G P+ SYN ++ FC
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V +G +PD TY++++ ALC + ++ +A ++ ++ G SP +TY +++ G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ KA L DEM K PD +TY++L+ GL +V+EA++ MG+
Sbjct: 464 KTGKAIKLLDEMRAKDLKPD--------TITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWL----------DEDTYDSLMDSLSYEDTYSSVMN 327
P+AV +++++ GL K D+AI +L +E +Y L++ L+Y
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY--------- 566
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
EG + AL+L +++ G + A V
Sbjct: 567 ----EGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 15/289 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ +C GR +AE++L M KG T++ +I + C + A +L +M G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+ ++YN L+ +C+ +D+A+ L M RG PD+ +YN +++ C
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
KG P TY+++++ L + +A L EM + PD +TY+ L+
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 216 LVG---EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
G E K FH + M G P VT+N+++ GLC + + A++ L
Sbjct: 496 REGKVDEAIKFFHEFERM-----------GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 273 MPEMGLSPDAVCYSTVISGLKIETEDK-AIWWLDEDTYDSLMDSLSYED 320
M G P+ Y+ +I GL E K A+ L+E LM S E
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 206/482 (42%), Gaps = 54/482 (11%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + EAE + + M GL ++ TYS +I FC K+D+A + L EM+ G S
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V YNSL+ +C+ + A G + M + L P V +Y ++ +C
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
KGI P T+++L+ L + +A LF EM V P+ +TY ++ C G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 219 EFTKAFHLHDEMIHKGFLPD----------------------FVTGFSPAI-----VTYN 251
+ +KAF EM KG +PD FV G + Y
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDS 311
L+HG C ++EEAL + + M + G+ D VCY +I G + K + L ++ +D
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 312 LMDSLSYEDT-YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
L +D Y+S+++ G+ + A + M +G + + V Y+ +INGL K
Sbjct: 677 ---GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHT 430
EA ++L S+P+ Y L+ + E V++ K + + A+T
Sbjct: 734 NEA--EVLCSKMQPVSSVPNQVTYGCFLDILTKGE----VDMQKAVELHNAILKGLLANT 787
Query: 431 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
YN+LI CR + +A + M+ G +P + +I+
Sbjct: 788 -----------------ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 491 AL 492
L
Sbjct: 831 EL 832
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 210/527 (39%), Gaps = 84/527 (15%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+ G+I EA +++ + G+ + Y+++I C K A L M G P+ V
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ L+ +CRR +D A+ L M + GL V YN +I+ C
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC------ 214
++K + P TY+SLM C + ++++A L+ EM G++P T+T LL+
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 215 -----------------------------CLVGEFTKAFHLHDEMIHKGFLPD------- 238
C G+ +KAF EM KG +PD
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 239 ---------------FVTGFSPAI-----VTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
FV G + Y L+HG C ++EEAL + + M + G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT-YSSVMNDYLAEGNMQR 337
D VCY +I G + K + L ++ +D L +D Y+S+++ G+ +
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR---GLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
A + M +G + + V Y+ +INGL K EA ++L S+P+ Y
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA--EVLCSKMQPVSSVPNQVTYGCF 758
Query: 398 LENCSNSE-------------FKSLVELVKDYSM--RDLSDDAATAHTTMLHLKNKTDGE 442
L+ + E K L+ Y+M R + L + DG
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 443 NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 489
+ D Y +I E CR ++V KA ++ M G P + LI
Sbjct: 819 S-PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 208/478 (43%), Gaps = 70/478 (14%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ G I AE + M K L TY+S++G +C+ KI+ A L EM KG +PS+
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
T+ +L+ R + AV + MAE + P+ +YN +I +C
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KGI PD +Y L+ LC+ + SEA + +G +E+ YT LL+ C G+
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG-LCFLDRVEEALEILRGMPEMGL 278
+A + EM+ +G D +V Y LI G L DR + +L+ M + GL
Sbjct: 628 LEEALSVCQEMVQRGVDLD--------LVCYGVLIDGSLKHKDR-KLFFGLLKEMHDRGL 678
Query: 279 SPDAVCYSTVISGLKIETED----KAIWWL--------DEDTYDSLMDSL---------- 316
PD V Y+++I K +T D IW L +E TY ++++ L
Sbjct: 679 KPDDVIYTSMIDA-KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 317 ---SYEDTYSSVMN--------DYLAEG--NMQRALQLDHDMSRDGYLSSYVAYSVLING 363
S SSV N D L +G +MQ+A++L H+ G L++ Y++LI G
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRG 796
Query: 364 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD 423
++ R EA + + DG +S T ++ E C ++ K +EL + + +
Sbjct: 797 FCRQGRIEEASELITRMIGDG-VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 424 DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 481
D YN LI C + + KA + EM+ G P+
Sbjct: 856 DRVA----------------------YNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 201/446 (45%), Gaps = 30/446 (6%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A ++ M G+ D Y+ VI C L + A +++ M A G ++V YN L+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
C++ V +AVGI + +A + L PDV +Y ++ C + P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
A SSL+E L ++ EA +L + ++ GVSP+ Y L+++ C +F +A L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
D M G P VTY+ LI C +++ AL L M + GL Y++
Sbjct: 391 DRMGK--------IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 288 VISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 346
+I+G K A ++ E L ++ TY+S+M Y ++G + +AL+L H+M+
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVV---TYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 347 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSE 405
G S ++ L++GL + R+A + L+ + P+ Y++++E C +
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVK--LFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 406 FKSLVELVKDYSMRDLSDDAATAHTTMLH----------LKNKTDGENKTDGGM----YN 451
E +K+ + + + D + + ++H K DG +K + + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYS-YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 452 LLIFEHCRSHNVHKAYNMYMEMVHYG 477
L+ CR + +A ++ EMV G
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRG 642
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 211/482 (43%), Gaps = 38/482 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC++ ++ EA + + + K L D TY +++ C + + + ++ EM+ FSPS
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+SLV +R +++A+ +++ + + G+SP++ YN +I C
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
G+ P+ TYS L++ C +L A EM+ G+ Y L+N C G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ + A EMI+K P +VTY +L+ G C ++ +AL + M G+
Sbjct: 452 DISAAEGFMAEMINK--------KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
+P ++T++SGL + A+ +E ++ + TY+ ++ Y EG+M +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN---RVTYNVMIEGYCEEGDMSK 560
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF------LSMPSY 391
A + +M+ G + +Y LI+GL + EAK + DG L+ Y
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-----VFVDGLHKGNCELNEICY 615
Query: 392 TVYDILLENCSNSEFKSLVELVKDYSMR----DLSDDAATAHTTMLH---------LKNK 438
T +L C + + + + ++ R DL ++ H LK
Sbjct: 616 T--GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 439 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 498
D K D +Y +I ++ + +A+ ++ M++ G P+ + A+I+ L
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 499 NE 500
NE
Sbjct: 734 NE 735
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 15/398 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L L R G I +A ++ M + + TY+ +I +C + A L EM KG
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +Y L+ C +A + + + + Y ++ FC
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V +G+ D Y L++ + F L +EM G+ PD++ YT +++A
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+F +AF + D MI++G +P+ VTY A+I+GLC V EA + M
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNE--------VTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDS-LSYEDTYSSVMNDYLAEGN 334
+ P+ V Y L I T+ + + +++++ L+ TY+ ++ + +G
Sbjct: 746 VSSVPNQVTYGCF---LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
++ A +L M DG + Y+ +IN L ++ ++A + G P Y
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI--RPDRVAY 860
Query: 395 DILLENCS-NSEFKSLVELVKDYSMRDLSDDAATAHTT 431
+ L+ C E EL + + L + T+ TT
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTT 898
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 157/368 (42%), Gaps = 48/368 (13%)
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
+ P+ T S+L+ L + A +LF +M+ G+ PD YT ++ + C + + ++A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
+ M TG IV YN LI GLC +V EA+ I + + L PD V
Sbjct: 248 EMIAHM--------EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299
Query: 285 YSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQRALQ 340
Y T++ GL K++ + + +DE M L + E SS++ G ++ AL
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDE------MLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 341 LDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 400
L + G + Y+ LI+ L K + EA +LL+ P+ Y IL++
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA--ELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 401 -CSNSEFKSLVELVKD----------YSMRDLSD------DAATAHTTMLHLKNKTDGEN 443
C + + + + + Y L + D + A M + NK
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 444 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDR 496
Y L+ +C ++KA +Y EM G AP +++ L+S L D +
Sbjct: 472 VV---TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 497 MYNEMS-W 503
++NEM+ W
Sbjct: 529 LFNEMAEW 536
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 216/474 (45%), Gaps = 30/474 (6%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C RI EA +++ M G + T++++I NK A L+ M+AKG P +
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTY +V C+R D A +L M + L P V YN +I C
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
KGI P+ TYSSL+ LC R S+A L +M+ ++PD T++ L++A G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+A L+DEM+ + P+IVTY++LI+G C DR++EA ++ M
Sbjct: 342 LVEAEKLYDEMVKR--------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 280 PDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
PD V Y+T+I G K + ++ + E + L+ + TY+ ++ G+ A
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV---TYNILIQGLFQAGDCDMA 450
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
++ +M DG + + Y+ L++GL K + +A Y+ P+ Y+I++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM--EPTIYTYNIMI 508
Query: 399 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH------LKNKTDG---ENKTDG- 447
E C + + +L + S++ + D A+ TM+ K + D E K DG
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPD-VVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 448 ----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
G YN LI R + + + EM G A ++ + + L D R+
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 621
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 31/355 (8%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + +A + + M+ KG+ + TYSS+I CN + A LLS+MI + +P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V T+++L+ A+ + + +A + M +R + P + +Y+ +I+ FC
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V K FPD TY++L++ C +R+ E ++FREM + G+ + +TY L+ G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 251
+ A + EM+ G P+ +T P I TYN
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYD 310
+I G+C +VE+ ++ + G+ PD V Y+T+ISG + ++++A E D
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
+L Y++++ L +G+ + + +L +M G+ ++ N LH
Sbjct: 566 G---TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 218/513 (42%), Gaps = 64/513 (12%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ G+ + TYS +I FC +++ A +L +M+ G+ P++VT +SL+ YC
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ +AV ++ M G P+ ++N +I V KG PD TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++ LC AF+L +M +G + P L Y +++ C A +L EM
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI--- 289
KG P+ +VTY++LI LC R +A +L M E ++PD +S +I
Sbjct: 285 KGIRPN--------VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 290 --SGLKIETE---DKAIWW-LDED--TYDSLMDSLSYED--------------------- 320
G +E E D+ + +D TY SL++ D
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 321 -TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
TY++++ + ++ +++ +MS+ G + + V Y++LI GL + A+
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 438
+ SDG P+ Y+ LL+ C N + + + +V +Y R + + M+ K
Sbjct: 457 MVSDGV--PPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 439 T----DGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 484
DG + K D YN +I CR + +A ++ EM G P+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 485 VLALISA--LDDDRMYNEMSWVINNTLRSCNLS 515
LI A D DR E S + +RSC +
Sbjct: 574 YNTLIRARLRDGDR---EASAELIKEMRSCGFA 603
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 191/429 (44%), Gaps = 39/429 (9%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
+S ++ +NK D +L +M G + TY+ L+ +CRR + A+ +L M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
+ G P++ + + +++ +C G P+ T+++L+ L + + S
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
EA L M+ G PD +TY ++N C G+ AF+L ++M +G L P
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKL-------EPG 255
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
++ YN +I GLC +++AL + + M G+ P+ V YS++IS L + W
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC----NYGRWSDAS 311
Query: 307 DTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+++ D T+S++++ ++ EG + A +L +M + S V YS LING
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 365 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSD 423
R EAK+ ++ S P Y+ L++ C + +E+ ++ S R L
Sbjct: 372 CMHDRLDEAKQMFEFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 424 DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMF 483
+ T YN+LI ++ + A ++ EMV G P++
Sbjct: 430 NTVT----------------------YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 484 SVLALISAL 492
+ L+ L
Sbjct: 468 TYNTLLDGL 476
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 145/373 (38%), Gaps = 55/373 (14%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
FP +S L+ A+ + L +M G+ + TY+ L+N C + A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 226 LHDEMIHKGFLPD---------------------------FVTGFSPAIVTYNALIHGLC 258
+ +M+ G+ P+ FVTG+ P VT+N LIHGL
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLS 317
++ EA+ ++ M G PD V Y V++GL K D A L++ L +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 318 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR-- 375
Y+++++ +M AL L +M G + V YS LI+ L R +A R
Sbjct: 258 ---IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 376 ----------DLLYIAS--DGFLS----MPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
D+ ++ D F+ + + +YD +++ + + L+ + M
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 420 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 479
D D+A M+ D YN LI C+ V + ++ EM G
Sbjct: 375 DRLDEAKQMFEFMV------SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 480 PHMFSVLALISAL 492
+ + LI L
Sbjct: 429 GNTVTYNILIQGL 441
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 199/439 (45%), Gaps = 70/439 (15%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ G+ D T++ VI FC ++ A ++L +M+ G+ P VT SLV +CRR+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
V AV ++ M E G PD+ +YN +I C KGI P+ TY++
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
L+ LC R S+A L +M++ ++P+ +TY+ LL+A G+ +A L +EM+
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
PD IVTY++LI+GLC DR++EA ++ M G D V Y+T+I+G
Sbjct: 291 IDPD--------IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING--- 339
Query: 295 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
+ ++ ++L +MS+ G +S+
Sbjct: 340 ----------------------------------FCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 355 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 413
V Y+ LI G + +A+ + D F P Y+ILL C N E + + +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQE--FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 414 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 473
+D R++ D T +TT++ GM C++ V +A++++ +
Sbjct: 424 EDMQKREMDLDIVT-YTTVIR-------------GM--------CKTGKVEEAWSLFCSL 461
Query: 474 VHYGHAPHMFSVLALISAL 492
G P + + ++S L
Sbjct: 462 SLKGLKPDIVTYTTMMSGL 480
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 22/321 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ R+ +A + ++ KG+ + TY++++ CN ++ A LLS+MI K +P+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+TY++L+ A+ + V +A + M + PD+ +Y+ +I+ C
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V KG D +Y++L+ C +R+ + LFREM + G+ + +TY L+ G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ KA +M DF G SP I TYN L+ GLC +E+AL I M + +
Sbjct: 380 DVDKAQEFFSQM-------DFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED------TYSSVMNDYLAE 332
D V Y+TVI G+ + + W SL SLS + TY+++M+ +
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAW--------SLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 333 GNMQRALQLDHDMSRDGYLSS 353
G + L M ++G + +
Sbjct: 484 GLLHEVEALYTKMKQEGLMKN 504
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 146/336 (43%), Gaps = 10/336 (2%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR R+ +A +++ M G D Y+++I C +++ A E+ KG P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY +LV C A +L M ++ ++P+V +Y+ ++ F
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V I PD TYSSL+ LC+ R+ EA +F M+ G D ++Y L+N C
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
L EM +G + + VTYN LI G V++A E M G+
Sbjct: 345 RVEDGMKLFREMSQRGLVSN--------TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
SPD Y+ ++ GL E + + ED MD TY++V+ G ++ A
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV--TYTTVIRGMCKTGKVEEA 454
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
L +S G V Y+ +++GL K E +
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 19/286 (6%)
Query: 4 NVNIYNGMIRGFATAAGKSDSE-------SKKVGEAFQS----LKRLCREGRIPEAEQML 52
NV Y ++ G ++ SD+ KK+ + L + G++ EA+++
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M + D TYSS+I C ++ID A+ + M++KG VV+YN+L+ +C+
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
V+ + + R M++RGL + +YN +I F GI PD TY
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
+ L+ LC L +A +F +M + + D +TYT ++ C G+ +A+ L +
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
KG PD IVTY ++ GLC + E + M + GL
Sbjct: 464 KGLKPD--------IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 146/380 (38%), Gaps = 99/380 (26%)
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNA------------------------------ 213
+L++A DLF +M++ P + + RLL+A
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 214 -------CCLVGEFTKAFHLHDEMIHKGFLPDFVT------------------------- 241
CC + + A + +M+ G+ PD VT
Sbjct: 125 IVINCFCCCF--QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 242 --GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDK 299
G+ P IV YNA+I LC RV +A + + + G+ P+ V Y+ +++GL +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR-- 240
Query: 300 AIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
W D S M TYS++++ ++ G + A +L +M R V
Sbjct: 241 ---WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 415
YS LINGL R EA + + S G L+ Y+ L+ C + ++L ++
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLA--DVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 416 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 475
S R L + T YN LI ++ +V KA + +M
Sbjct: 356 MSQRGLVSNTVT----------------------YNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 476 YGHAPHMFSVLALISALDDD 495
+G +P +++ L+ L D+
Sbjct: 394 FGISPDIWTYNILLGGLCDN 413
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 242/556 (43%), Gaps = 71/556 (12%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ LC++G + E E++L+ + +G+ + TY+ I C ++D A ++ +I +G
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V+TYN+L++ C+ +A L M GL PD +YN +I+ +C
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V G PD TY SL++ LC E + A LF E L G+ P+ + Y L+
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIV 248
G +A L +EM KG +P+ T G+ P I
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDT 308
T+N LIHG ++E ALEIL M + G+ PD Y+++++GL ++ + + +T
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM----ET 518
Query: 309 YDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
Y ++++ + T++ ++ + AL L +M V + LI+G K
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 367 KARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE-LVKDYSMRDLSDDA 425
+ L + + S Y+I++ + ++ E L ++ R L D
Sbjct: 579 NGDL-DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 426 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 485
T Y L++ C++ NV+ Y +EM+ G P + ++
Sbjct: 638 YT----------------------YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Query: 486 LALISAL-DDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMA 544
+I+ L +DR+Y E + +I+ ++ + ++ V + +V K E+ A VL ++
Sbjct: 676 GRVINCLCVEDRVY-EAAGIIHRMVQKGLVPEA----VNTICDVDKKEVAAPKLVLEDLL 730
Query: 545 MDS--------LLLDG 552
S LL DG
Sbjct: 731 KKSCITYYAYELLFDG 746
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 200/456 (43%), Gaps = 33/456 (7%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
E ++ M G+ L T++ ++ C + LL ++I +G P++ TYN +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
C+R +D AV ++ + E+G PDV +YN +I C V++G+
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
PD+ TY++L+ C + A + + + G PD+ TY L++ C GE +A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYS 286
+E + KG P+ ++ YN LI GL + EA ++ M E GL P+ ++
Sbjct: 379 FNEALGKGIKPN--------VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 287 TVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDH 343
+++GL K D D +M S Y T++ +++ Y + M+ AL++
Sbjct: 431 ILVNGLC-----KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 344 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CS 402
M +G Y+ L+NGL K ++ + + G P+ ++ILLE+ C
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG--CAPNLFTFNILLESLCR 543
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTM--------------LHLKNKTDGENKTDGG 448
+ + L+++ + ++ DA T T + L K + + +
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 449 MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 484
YN++I NV A ++ EMV P ++
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 213/526 (40%), Gaps = 84/526 (15%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 94
+++L G+ E++L M+ G + E Y + + K+ A + M
Sbjct: 47 IEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD 106
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P+V +YN+++ D+A + M +RG++PDV S+ + FC
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+G + Y +++ E +E ++LF +ML GVS T+ +LL
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAI 247
C G+ + L D++I +G LP+ T G P +
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAI-- 301
+TYN LI+GLC + +EA L M GL PD+ Y+T+I+G ++ ++ +
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 302 -----WWLDEDTYDSLMDSLSYEDT----------------------YSSVMNDYLAEGN 334
+ D+ TY SL+D L +E Y++++ +G
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
+ A QL ++MS G + +++L+NGL K +A + + S G+ P +
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF--PDIFTF 464
Query: 395 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 454
+IL+ YS + ++A ML N D + T YN L+
Sbjct: 465 NILIHG---------------YSTQLKMENALEILDVMLD--NGVDPDVYT----YNSLL 503
Query: 455 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
C++ Y MV G AP++F+ L+ +L R +E
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 237/532 (44%), Gaps = 68/532 (12%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K LC R EA +++ M+ G+ + TY+ +I C+ K + A LL +M+ KG
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 96 SPSVVTYNSLVFAYCRR----DSVD------------------------------KAVGI 121
P+V+TYN+L+ YC+R D+VD KA+G+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV 449
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
L M ER + PDV +YN +I C D+G+ PD TY+S++++LC
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+R+ EA DLF + + GV+P+ + YT L++ C G+ +A + ++M+ K LP+
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS-- 567
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAI 301
+T+NALIHGLC +++EA + M ++GL P + +I L + +
Sbjct: 568 ------LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 302 WWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
+ + ++ S + D TY++ + Y EG + A + M +G YS
Sbjct: 622 Y----SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
LI G +T A D+L D +T ++ K L+E+ Y +
Sbjct: 678 LIKGYGDLGQTNFA-FDVLKRMRDTGCEPSQHTFLSLI---------KHLLEM--KYGKQ 725
Query: 420 DLSDDAATAHTTMLH-------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYME 472
S+ A + M+ L+ + + Y LI C N+ A ++
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 473 MV-HYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVL 523
M + G +P AL+S + +NE + V+++ + +L E KVL
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 211/505 (41%), Gaps = 51/505 (10%)
Query: 4 NVNIYNGMIRGFATAAGKSDSES--KKVGEA-----FQSLKRL----CREGRIPEAEQML 52
N+ YN M+ G+ ++ K+ EA F + L C+ + A ++
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
M KG +E Y+ +I C +ID A L +M P+V TY L+ + C
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ +A+ +++ M E G+ P++ +Y +I C ++KG+ P+ TY
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L+ C + +A D+ M +SP+ TY L+ C KA + ++M+
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLE 455
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+ LPD +VTYN+LI G C + A +L M + GL PD Y+++I L
Sbjct: 456 RKVLPD--------VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 293 -KIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDG 349
K + ++A D +DSL + Y+++++ Y G + A + M
Sbjct: 508 CKSKRVEEAC-----DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSL 409
L + + ++ LI+GL + +EA + G P+ + IL+
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL--QPTVSTDTILIH---------- 610
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
L+KD D A + ML K D Y I +CR + A +M
Sbjct: 611 -RLLKDGDF----DHAYSRFQQML------SSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 470 YMEMVHYGHAPHMFSVLALISALDD 494
+M G +P +F+ +LI D
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGD 684
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 28/307 (9%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR---------------LCREGRI 45
++ N YN +I+G+ + + K +G + L+R CR G
Sbjct: 424 LSPNTRTYNELIKGYCKS-----NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 46 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 105
A ++L +M +GL D+ TY+S+I C +++ A L + KG +P+VV Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 106 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 165
+ YC+ VD+A +L M + P+ ++N +I C V G+
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
P +T + L+ L + A+ F++ML G PD TYT + C G A
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ +M G PD + TY++LI G L + A ++L+ M + G P +
Sbjct: 659 MMAKMRENGVSPD--------LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 286 STVISGL 292
++I L
Sbjct: 711 LSLIKHL 717
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 37/422 (8%)
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
YN+L+ + R VD+ + M E + P++ +YN++++ +C V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
+ G+ PD TY+SL+ C + L AF +F EM G +E+ YT L++ C+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+A L +M P + TY LI LC +R EAL +++ M E G+ P+
Sbjct: 306 EAMDLFVKMKDDECF--------PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 282 AVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQ 340
Y+ +I L + + +KA L + LM ++ TY++++N Y G ++ A+
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI---TYNALINGYCKRGMIEDAVD 414
Query: 341 LDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE- 399
+ M + Y+ LI G + K+ +A L + L P Y+ L++
Sbjct: 415 VVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVL--PDVVTYNSLIDG 471
Query: 400 NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML-----------------HLKNKTDGE 442
C + F S L+ + R L D T +T+M+ L+ K
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWT-YTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 443 NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMS 502
N MY LI +C++ V +A+ M +M+ P+ + ALI L D E +
Sbjct: 531 NVV---MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 503 WV 504
+
Sbjct: 588 LL 589
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 180/418 (43%), Gaps = 62/418 (14%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ R+ EA + + ++ KG+ + Y+++I +C K+D AH +L +M++K P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+T+N+L+ C + +A + M + GL P V + +I +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ G PDA TY++ ++ C E RL +A D+ +M GVSPD TY+ L+ +G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH---------------GLCFLDRV 263
+ AF + M TG P+ T+ +LI LC + +
Sbjct: 687 QTNFAFDVLKRMRD--------TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 264 EE---ALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAIWWLDED--------T 308
E +E+L M E ++P+A Y +I G+ + +K + +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 309 YDSLMD---SLSYEDTYSSVMNDYLAEGNM-------------------QRALQLDHDMS 346
+++L+ L + + V++D + G++ +R + ++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 347 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 404
+ GY +A+ ++I+G+ K+ EA +L + S T Y +L+E +S
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLV-EAFYELFNVMEKNGCKFSSQT-YSLLIEGPPDS 914
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 162/393 (41%), Gaps = 46/393 (11%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS-------------LKRLCREGRIPEAEQ 50
NV +Y +I G+ AGK D E+ + E S + LC +G++ EA
Sbjct: 531 NVVMYTALIDGYC-KAGKVD-EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+ E M GL T + +I D A++ +M++ G P TY + + YC
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R + A ++ M E G+SPD+ +Y+ +I + D G P
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 171 TYSSLME---------------ALCVEQRLSE---AFDLFREMLRGGVSPDELTYTRLLN 212
T+ SL++ LC + E +L +M+ V+P+ +Y +L+
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
C VG A + D M G SP+ + +NAL+ C L + EA +++
Sbjct: 769 GICEVGNLRVAEKVFDHMQRN-------EGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 273 MPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYL 330
M +G P +I GL + E + + +L+ YED + +++
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKER----GTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
+G ++ +L + M ++G S YS+LI G
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 182/451 (40%), Gaps = 60/451 (13%)
Query: 82 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD-------- 133
S +LL+ +I G+ V L+ C DSV A+ +L R ++ D
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIKSC--DSVGDALYVLDLC--RKMNKDERFELKYK 180
Query: 134 --VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDL 191
+ YN +++ ++ + P+ TY+ ++ C + EA
Sbjct: 181 LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQY 240
Query: 192 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 251
+++ G+ PD TYT L+ C + AF + +EM KG + V Y
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE--------VAYT 292
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYD 310
LIHGLC R++EA+++ M + P Y+ +I L E + +A+ + E
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
+ ++ TY+ +++ ++ ++A +L M G + + + Y+ LING K+
Sbjct: 353 GIKPNIH---TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHT 430
+A D++ + LS P+ Y+ EL+K Y + H
Sbjct: 410 EDA-VDVVELMESRKLS-PNTRTYN---------------ELIKGYC-------KSNVHK 445
Query: 431 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
M L + + D YN LI CRS N AY + M G P ++ ++I
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 491 ALDDDRMYNEMSWVINNTLRSCNLSDSEQLK 521
+L + E +C+L DS + K
Sbjct: 506 SLCKSKRVEE----------ACDLFDSLEQK 526
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 202/454 (44%), Gaps = 30/454 (6%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L C RI EA +++ M G D T+++++ NK A L+ M+ KG
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +VTY +++ C+R D A+ +L M + + DV Y+ VI C
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+KGI PD TYSSL+ LC R S+A L +ML ++P+ +T+ L++A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ +A L DEMI + P IVTYN+LI+G C DR++EA +I M
Sbjct: 322 KEGKLIEAEKLFDEMIQR--------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 276 MGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
PD V Y+T+I+G K + + + + L+ + TY+++++ + +
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV---TYTTLIHGFFQASD 430
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
A + M DG + + Y+ L++GL K + +A Y+ P Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM--EPDIYTY 488
Query: 395 DILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--------------LHLKNKT 439
+I+ E C + + +L S++ + D +T + L +K K
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 440 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 473
DG D G YN LI H R + + + EM
Sbjct: 549 DGP-LPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 221/512 (43%), Gaps = 62/512 (12%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ G+ + TY+ +I C +++ A +L +M+ G+ PS+VT NSL+ +C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ + +AV ++ M E G PD ++ ++ V KG PD TY
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
+++ LC A +L +M +G + D + Y+ ++++ C A +L EM +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI--- 289
KG PD + TY++LI LC R +A +L M E ++P+ V ++++I
Sbjct: 269 KGIRPD--------VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 290 --SGLKIETE---DKAIWW-LDED--TYDSLMDSLSYED--------------------- 320
G IE E D+ I +D + TY+SL++ D
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 321 -TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
TY++++N + + ++L DMSR G + + V Y+ LI+G + + A+
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTT---MLHL 435
+ SDG P+ Y+ LL+ C N + + + + + + D T + M
Sbjct: 441 MVSDGV--HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 436 KNKTDGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 485
DG + K D YN +I C+ +AY ++++M G P +
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 486 LALISA--LDDDRMYNEMSWVINNTLRSCNLS 515
LI A D D+ S + +RSC +
Sbjct: 559 NTLIRAHLRDGDK---AASAELIKEMRSCRFA 587
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 32/405 (7%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
+S ++ + K D + +M G S ++ TYN ++ CRR + A+ IL M
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
+ G P + + N +++ FC V+ G PD T+++L+ L + S
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
EA L M+ G PD +TY ++N C GE A +L ++M KG
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKG-------KIEAD 239
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+V Y+ +I LC V++AL + M G+ PD YS++IS L + W
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC----NYGRW---S 292
Query: 307 DTYDSLMDSLSYED-----TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
D L D L + T++S+++ + EG + A +L +M + + V Y+ LI
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 362 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRD 420
NG R EA++ + S L P Y+ L+ C + +EL +D S R
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCL--PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 421 LSDDAATAHTTMLH-LKNKTDGENKTDGGMYNLLIFEHCRSHNVH 464
L + T +TT++H +D +N ++F+ S VH
Sbjct: 411 LVGNTVT-YTTLIHGFFQASDCDNAQ-------MVFKQMVSDGVH 447
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 37/329 (11%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
FP +S L+ A+ ++ +M GVS + TY ++N C + + A
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ +M+ G+ P+IVT N+L++G C +R+ EA+ ++ M EMG PD V +
Sbjct: 122 ILGKMMK--------LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 173
Query: 286 STVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHD 344
+T++ GL + +A+ ++ L TY +V+N G AL L +
Sbjct: 174 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLV---TYGAVINGLCKRGEPDLALNLLNK 230
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 403
M + + V YS +I+ L K +A L+ D P Y L+ C+
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALN--LFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 404 SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 463
+ L+ D R ++ + T +N LI + +
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVT----------------------FNSLIDAFAKEGKL 326
Query: 464 HKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+A ++ EM+ P++ + +LI+
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 143/353 (40%), Gaps = 76/353 (21%)
Query: 163 KGIFPDAATYSSLMEALC----VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+GI+ +Y E L + +L EA DLF EM++ P + +++LL+A +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+F ++M + G S + TYN +I+ LC ++ AL IL M ++G
Sbjct: 80 KFDLVISFGEKME--------ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
P V T +S++N + + A
Sbjct: 132 GPSIV-------------------------------------TLNSLLNGFCHGNRISEA 154
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+ L M GY V ++ L++GL + + EA + + G P Y ++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVI 212
Query: 399 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD-GENKTDGGMYNLLIFE 456
C E DL+ L+L NK + G+ + D +Y+ +I
Sbjct: 213 NGLCKRGE-------------PDLA----------LNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 457 HCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTL 509
C+ +V A N++ EM + G P +F+ +LIS L + +++ S ++++ L
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 207/454 (45%), Gaps = 30/454 (6%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L C RI +A ++ M G D T++++I N+ A L+ M+ KG
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +VTY +V C+R +D A+ +L+ M + + P V YN +I C
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+KGI P+ TY+SL+ LC R S+A L +M+ ++P+ +T++ L++A
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ +A L+DEMI + PD I TY++LI+G C DR++EA + M
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 276 MGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
P+ V Y+T+I G K + D+ + E + L+ + TY+++++ +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV---TYTTLIHGFFQARE 446
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
A + M DG L + YS+L++GL + A Y+ P Y
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM--EPDIYTY 504
Query: 395 DILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH------LKNKTDG---ENK 444
+I++E C + + +L S++ + + T +TTM+ LK + D E K
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT-YTTMMSGFCRKGLKEEADALFREMK 563
Query: 445 TDG-----GMYNLLIFEHCRSHNVHKAYNMYMEM 473
+G G YN LI H R + + + EM
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 221/525 (42%), Gaps = 66/525 (12%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ G+ + TYS +I FC +++ A +L++M+ G+ P +VT NSL+ +C
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ + AV ++ M E G PD ++N +I V KG PD TY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++ LC + A L ++M +G + P + Y +++A C A +L EM +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI--- 289
KG P+ +VTYN+LI LC R +A +L M E ++P+ V +S +I
Sbjct: 285 KGIRPN--------VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 290 --SGLKIETE---DKAIWW-LDED--TYDSLMDSLSYED--------------------- 320
G +E E D+ I +D D TY SL++ D
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 321 -TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
TY++++ + + ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 438
+ SDG L P Y ILL+ C+N + ++ + + + + D T
Sbjct: 457 MVSDGVL--PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT----------- 503
Query: 439 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 498
YN++I C++ V ++++ + G P++ + ++S +
Sbjct: 504 -----------YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 499 NEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 543
E + L DS L ++ + A +++ EM
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 22/373 (5%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
+S ++ +NK D +L +M G S ++ TY+ L+ +CRR + A+ +L M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
+ G PD+ + N +++ FC V+ G PD+ T+++L+ L R S
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
EA L M+ G PD +TY ++N C G+ A L +M +G + P
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKI-------EPG 255
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+V YN +I LC V +AL + M G+ P+ V Y+++I L W D
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR-----WSDA 310
Query: 307 DTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
S M T+S++++ ++ EG + A +L +M + YS LING
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 370
Query: 364 LHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 421
R EAK L I+ D F P+ Y+ L++ C +EL ++ S R L
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 422 SDDAATAHTTMLH 434
+ T +TT++H
Sbjct: 428 VGNTVT-YTTLIH 439
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 15/337 (4%)
Query: 32 AFQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
+ SL R LC GR +A ++L M + + + T+S++I F K+ A L EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
I + P + TY+SL+ +C D +D+A + M + P+V +YN +I FC
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
+G+ + TY++L+ + A +F++M+ GV PD +TY+ L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
L+ C G+ A + + + PD I TYN +I G+C +VE+ ++
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPD--------IYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 271 RGMPEMGLSPDAVCYSTVISGL--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 328
+ G+ P+ V Y+T++SG K E+ + + L DS TY++++
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS----GTYNTLIRA 580
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
+L +G+ + +L +M ++ ++ N LH
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLH 617
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 37/329 (11%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
FP +S L+ A+ + L +M G+S + TY+ L+N C + + A
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ +M+ G+ PD IVT N+L++G C +R+ +A+ ++ M EMG PD+ +
Sbjct: 138 VLAKMMKLGYEPD--------IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 286 STVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHD 344
+T+I GL + +A+ +D L TY V+N G++ AL L
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV---TYGIVVNGLCKRGDIDLALSLLKK 246
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 403
M + V Y+ +I+ L +A L+ D P+ Y+ L+ C+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALN--LFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 404 SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 463
+ L+ D R ++ + T ++ LI + +
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVT----------------------FSALIDAFVKEGKL 342
Query: 464 HKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+A +Y EM+ P +F+ +LI+
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 216/473 (45%), Gaps = 28/473 (5%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C RI +A +++ M G D T++++I NK A L+ +M+ +G P +
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTY ++V C+R +D A+ +L+ M + + DV YN +I C
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KGI PD TYSSL+ LC R S+A L +M+ ++P+ +T++ L++A G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+A L+DEMI + PD I TY++LI+G C DR++EA + M
Sbjct: 344 LVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 280 PDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
P+ V YST+I G K + ++ + E + L+ + TY+++++ + + A
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV---TYTTLIHGFFQARDCDNA 452
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+ M G + + Y++L++GL K + +A Y+ P Y+I++
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM--EPDIYTYNIMI 510
Query: 399 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN--------KTDG-- 447
E C + + EL + S++ +S + +T + K E K DG
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 448 ---GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
G YN LI R + + + EM G A ++ + + L D R+
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 623
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 37/358 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + +A + M KG+ D TYSS+I CN + A LLS+MI + +P+
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVT+++L+ A+ + + +A + M +R + PD+ +Y+ +I+ FC
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ K FP+ TYS+L++ C +R+ E +LFREM + G+ + +TYT L++
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 251
+ A + +M+ G P+ +T P I TYN
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAIWWLDED 307
+I G+C +VE+ E+ + G+SP+ + Y+T+ISG E D + + ED
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 308 TYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
L TY++++ L +G+ + + +L +M G+ ++ N LH
Sbjct: 568 ------GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 201/474 (42%), Gaps = 66/474 (13%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ G+ D TYS I FC +++ A +L++M+ G+ P +VT +SL+ YC
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ AV ++ M E G PD ++ +I V +G PD TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
+++ LC + A L ++M +G + D + Y +++ C A +L EM +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI--- 289
KG PD + TY++LI LC R +A +L M E ++P+ V +S +I
Sbjct: 287 KGIRPD--------VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 290 --SGLKIETE---DKAIWW-LDED--TYDSLMDSLSYED--------------------- 320
G +E E D+ I +D D TY SL++ D
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 321 -TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
TYS+++ + ++ ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 438
+ S G P+ Y+ILL+ C N + A A +L+
Sbjct: 459 MVSVGV--HPNILTYNILLDGLCKNGKL-------------------AKAMVVFEYLQRS 497
Query: 439 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
T + D YN++I C++ V + ++ + G +P++ + +IS
Sbjct: 498 T---MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 22/373 (5%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
++ ++ +NK + +L +M G S + TY+ + +CRR + A+ +L M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
+ G PD+ + + +++ +C V+ G PD T+++L+ L + + S
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
EA L +M++ G PD +TY ++N C G+ A L +M KG +
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKI-------EAD 257
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+V YN +I GLC +++AL + M G+ PD YS++IS L W D
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR-----WSDA 312
Query: 307 DTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
S M T+S++++ ++ EG + A +L +M + YS LING
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 364 LHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 421
R EAK L I+ D F P+ Y L++ C + +EL ++ S R L
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCF---PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 422 SDDAATAHTTMLH 434
+ T +TT++H
Sbjct: 430 VGNTVT-YTTLIH 441
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K C+ R+ E ++ M +GL + TY+++I F D+A + +M++ G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+++TYN L+ C+ + KA+ + + + PD+ +YN +I C
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
KG+ P+ Y++++ C + EA L ++M G P+ TY L+ A
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVT 241
G+ + L EM GF D T
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDAST 610
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 160/401 (39%), Gaps = 51/401 (12%)
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
G P+V ++ +L + C S A G R + LS D+ + + F
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLS-DIIKVDDAVDLF--------- 71
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
V FP ++ L+ A+ + L +M G+S D TY+ +N
Sbjct: 72 ----GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C + + A + +M+ G+ PD IVT ++L++G C R+ +A+ ++ M
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPD--------IVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 274 PEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 332
EMG PD ++T+I GL + + +A+ +D+ L TY +V+N
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV---TYGTVVNGLCKR 236
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G++ AL L M + + V Y+ +I+GL K +A L+ D P
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN--LFTEMDNKGIRPDVF 294
Query: 393 VYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 451
Y L+ C+ + L+ D R ++ + T ++
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT----------------------FS 332
Query: 452 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
LI + + +A +Y EM+ P +F+ +LI+
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 223/506 (44%), Gaps = 46/506 (9%)
Query: 30 GEAFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 88
+A+ SL + CRE + + ++L MK + + + TY +V+ C+ +D A+ ++
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 148
EMIA G P+VV Y +L+ + + A+ +L+ M E+G++PD+ YN +I
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 149 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 208
V+ G+ P+A TY + + + A +EM GV P+++ T
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 268
L+N C G+ +A + M+ +G L D TY L++GL D+V++A E
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGD--------AKTYTVLMNGLFKNDKVDDAEE 613
Query: 269 ILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 327
I R M G++PD Y +I+G K+ KA DE + L ++ Y+ ++
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI---IYNMLLG 670
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
+ G +++A +L +MS G + V Y +I+G K EA R + G +
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV- 729
Query: 388 MPSYTVYDILLENC----------------------SNSEFKSLVELVKDYSMRDLSDDA 425
P VY L++ C S + F +L+ V + +L
Sbjct: 730 -PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL---- 784
Query: 426 ATAHTTMLH--LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMF 483
T +L+ + D K + YN++I C+ N+ A ++ +M + P +
Sbjct: 785 ---KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 484 SVLALISALDDDRMYNEMSWVINNTL 509
+ +L++ D EM V + +
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAI 867
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 195/485 (40%), Gaps = 66/485 (13%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ R+ +A+ +L M G+ LD TYS +I D+A L+ EM++ G +
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
Y+ + + ++KA + M GL P +Y +I +C
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ I TY ++++ +C L A+++ +EM+ G P+ + YT L+
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
F A + EM +G PD I YN+LI GL R++EA L M E GL
Sbjct: 467 RFGDAMRVLKEMKEQGIAPD--------IFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 279 SPDAVCYSTVISGL----KIETEDKAIWWLDE---------------------------D 307
P+A Y ISG + + DK + + E
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 308 TYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
Y S++D L TY+ +MN + A ++ +M G +Y VLING
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDD 424
K ++A + +G P+ +Y++LL C + E + EL+ + S++ L +
Sbjct: 639 KLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 425 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 484
A T Y +I +C+S ++ +A+ ++ EM G P F
Sbjct: 697 AVT----------------------YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 485 VLALI 489
L+
Sbjct: 735 YTTLV 739
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 174/462 (37%), Gaps = 71/462 (15%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR-------RD--------------SVD 116
N++D + M+ + V TY+ L+ A+CR +D +VD
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVD 259
Query: 117 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 176
A+ + +M +GL P +Y+ +I C G+ D TYS L+
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 177 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV-----GEFTKAFHLHDEMI 231
+ L + A L EM+ G++ Y CC+ G KA L D MI
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYD-----CCICVMSKEGVMEKAKALFDGMI 374
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
G +P Y +LI G C V + E+L M + + Y TV+ G
Sbjct: 375 ASGLIPQ--------AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 292 LKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
+ + D A + E ++ Y++++ +L A+++ +M G
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVV---IYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKS- 408
Y+ LI GL K R EA+ L+ + +G P+ Y + SEF S
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFISGYIEASEFASA 541
Query: 409 ------------------LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 450
L+ +Y + +A +A+ +M+ G+ KT Y
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD--QGILGDAKT----Y 595
Query: 451 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+L+ ++ V A ++ EM G AP +FS LI+
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 147/363 (40%), Gaps = 49/363 (13%)
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG------ 218
+ P + L++AL RL +D+++ M+ V D TY L+ A C G
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 219 --------EFTKA-------FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 263
EF A L + MI KG +P TY+ LI GLC + R+
Sbjct: 242 DVLFKTEKEFRTATLNVDGALKLKESMICKGLVP--------LKYTYDVLIDGLCKIKRL 293
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 322
E+A +L M +G+S D YS +I G LK D A + E + D
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 382
VM+ EG M++A L M G + AY+ LI G ++ R+ L+ +
Sbjct: 354 ICVMS---KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 383 DGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH--LKNKTD 440
+ P YT ++ CS+ + +VK+ + +TT++ L+N
Sbjct: 411 RNIVISP-YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI-YTTLIKTFLQNSRF 468
Query: 441 G-------ENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 488
G E K G YN LI ++ + +A + +EMV G P+ F+ A
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 489 ISA 491
IS
Sbjct: 529 ISG 531
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 99/284 (34%), Gaps = 78/284 (27%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L CR G I +A+++L+ M KGL + TY ++I +C + A L EM KG
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGIL--------------------------------- 122
P Y +LV CR + V++A+ I
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 123 --RAMA---ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
R M +R P+ +YN +I C + + P TY+SL+
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK---- 233
R +E F +F E + G+ PD + Y+ ++NA G TKA L D+M K
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 234 ------------------------------------GFLPDFVT 241
++PD T
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 224/503 (44%), Gaps = 48/503 (9%)
Query: 9 NGMIRGFATAAGKSDSESKKVGEAFQSLKR------------LCREGRIPEAEQMLEVMK 56
NG++ FA GK+D + + + R +C+EG + A + E MK
Sbjct: 231 NGLLHRFAKL-GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 116
+GL D TY+S+I F + ++D EM P V+TYN+L+ +C+ +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 117 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 176
+ R M GL P+V SY+ ++ FC G+ P+ TY+SL+
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 177 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 236
+A C LS+AF L EML+ GV + +TYT L++ C +A L +M G +
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 237 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL---- 292
P+ + +YNALIHG ++ ALE+L + G+ PD + Y T I GL
Sbjct: 470 PN--------LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 293 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 352
KIE + + E + +SL Y+++M+ Y GN L L +M
Sbjct: 522 KIEAAKVVMNEMKECGIKA--NSL----IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 353 SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVE 411
+ V + VLI+GL K +A D S+ F + ++ +++ C +++ ++
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAV-DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 412 LVKDYSMRDLSDDAATAHTTM-------------LHLKNK-TDGENKTDGGMYNLLIFEH 457
L + + L D TA+T++ L L++K + K D Y L++
Sbjct: 635 LFEQMVQKGLVPD-RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Query: 458 CRSHNVHKAYNMYMEMVHYGHAP 480
+ + KA + EM+ G P
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHP 716
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 15/330 (4%)
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P +++L +++A+ M + P S N ++ +F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
+ G P TY+ +++ +C E + A LF EM G+ PD +TY +++
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
VG +EM PD ++TYNALI+ C ++ LE R M
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPD--------VITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 277 GLSPDAVCYSTVISGLKIE-TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
GL P+ V YST++ E +AI + + L+ + E TY+S+++ GN+
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN---EYTYTSLIDANCKIGNL 418
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
A +L ++M + G + V Y+ LI+GL R +EA+ L+ D +P+ Y+
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE--LFGKMDTAGVIPNLASYN 476
Query: 396 ILLENCSNSE-FKSLVELVKDYSMRDLSDD 424
L+ ++ +EL+ + R + D
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 24/259 (9%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR----------------LCREGRIPE 47
N+ YN +I GF A + E LK LC +I
Sbjct: 471 NLASYNALIHGFVKAKNMD-----RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 48 AEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
A+ ++ MK G+ + Y++++ +F + N + H LL EM +VVT+ L+
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH-LLDEMKELDIEVTVVTFCVLI 584
Query: 107 FAYCRRDSVDKAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 165
C+ V KAV R + GL + + +I C V KG+
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
PD Y+SLM+ + + EA L +M G+ D L YT L+ + KA
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 226 LHDEMIHKGFLPDFVTGFS 244
+EMI +G PD V S
Sbjct: 705 FLEEMIGEGIHPDEVLCIS 723
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 43/371 (11%)
Query: 7 IYNGMIRGFATAAGKSDSES--KKVGEAFQSLKRLC----------REGRIPEAEQMLEV 54
I+N +I GF T D+++ + ++ + +C +EG + A ++L
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ KG + +Y+ ++ FC L KID A+ +L+EM A G P+ V +N L+ A+C+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
+ +AV I R M +G PDV ++N +IS C + +G+ + TY++
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
L+ A + EA L EM+ G DE+TY L+ C GE KA L ++M+ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 235 FLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDRVEEAL 267
P ++ G +P IVT+N+LI+GLC R+E+ L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 268 EILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 326
+ R + G+ PD V ++T++S L K A LDE D + + T+S ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN---HRTWSILL 711
Query: 327 NDYLAEGNMQR 337
+ + + R
Sbjct: 712 QSIIPQETLDR 722
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 195/490 (39%), Gaps = 67/490 (13%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K C I A +L M G + Y ++I N+++ A LL EM G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX-- 153
P T+N ++ C+ D +++A ++ M RG +PD +Y +++ C
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 154 ------------------------------XXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
GI PD TY+SL+ E
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
+ A ++ +M G P+ +YT L++ C +G+ +A+++ +EM G
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS--------ADGL 455
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
P V +N LI C R+ EA+EI R MP G PD ++++ISGL E K W
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
L D ++ TY++++N +L G ++ A +L ++M G + Y+ LI G
Sbjct: 516 LLRDMISE--GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 364 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLS 422
L + +A+ + DG PS +IL+ C + + VE K+ +R +
Sbjct: 574 LCRAGEVDKARSLFEKMLRDG--HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 423 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 482
D T +N LI CR+ + M+ ++ G P
Sbjct: 632 PDIVT----------------------FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 483 FSVLALISAL 492
+ L+S L
Sbjct: 670 VTFNTLMSWL 679
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 203/520 (39%), Gaps = 78/520 (15%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI-AKG 94
+ +L G +++L MK +G+ E + S++ + L+ EM
Sbjct: 118 IGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS 177
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P+ +YN ++ + A + M R + P + ++ V+ FC
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
G P++ Y +L+ +L R++EA L EM G PD T+ ++
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C +A + + M+ +GF PD +TY L++GLC + RV+ A ++ +P
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPD--------DITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 275 EMGLSPDAVCYSTVISGLKIET---EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 331
+ P+ V ++T+I G + KA+ +Y + D TY+S++ Y
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC----TYNSLIYGYWK 401
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
EG + AL++ HDM G + +Y++L++G K + EA L +++DG
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG------- 454
Query: 392 TVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYN 451
LK T G +N
Sbjct: 455 -------------------------------------------LKPNTVG--------FN 463
Query: 452 LLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRS 511
LI C+ H + +A ++ EM G P +++ +LIS L + W++ + +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 512 CNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLD 551
++++ L + + EI ++ EM LD
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGE-AFQS-----------LKRLCREGRIPEAEQM 51
N YN +I F G+ K V E FQ +K LCR G + +A +
Sbjct: 528 NTVTYNTLINAFLRR-GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
E M G + + +I C ++ A EM+ +G +P +VT+NSL+ CR
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
++ + + R + G+ PD ++N ++S C ++ G P+ T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 172 YSSLMEALCVEQRL 185
+S L++++ ++ L
Sbjct: 707 WSILLQSIIPQETL 720
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 162/336 (48%), Gaps = 15/336 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCR R A ++ M G D T SS+I FC N++ A L+S+M GF P
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV YN+++ C+ V+ AV + M G+ D +YN +++ C
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V + I P+ T++++++ E + SEA L+ EM R V PD TY L+N C+ G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A + D M+ KG LPD +VTYN LI+G C RV+E ++ R M + GL
Sbjct: 294 RVDEAKQMLDLMVTKGCLPD--------VVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 279 SPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
D + Y+T+I G + D A ++ + S MDS TYS ++ +++
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAA-----QEIF-SRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
AL L +M + Y+++I+G+ K +A
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 197/447 (44%), Gaps = 73/447 (16%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ G+ D +Y+ VI C ++ A +++ +M+ G+ P VVT +SL+ +C+ +
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
V A+ ++ M E G PDV YN +I C G+ DA TY+S
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
L+ LC R S+A L R+M+ + P+ +T+T +++ G+F++A L++EM +
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
PD + TYN+LI+GLC RV+EA ++L M G PD V Y+T+I+G
Sbjct: 275 VDPD--------VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF-- 324
Query: 295 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
+ K + DE T +L +M++ G +
Sbjct: 325 -CKSKRV---DEGT-------------------------------KLFREMAQRGLVGDT 349
Query: 355 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 413
+ Y+ +I G + R A+ ++ D S P+ Y ILL C N + + L
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQE--IFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 414 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 473
++ ++ D T YN++I C+ NV A++++ +
Sbjct: 405 ENMQKSEIELDITT----------------------YNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 474 VHYGHAPHMFSVLALISALDDDRMYNE 500
G P + S +IS R +++
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDK 469
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 40/285 (14%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ G + +A ++ + M+ G+ D TY+S++ C + A L+ +M+ + P+V
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+T+ +++ + + +A+ + M R + PDV +YN +I+ C
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV------------------- 200
V KG PD TY++L+ C +R+ E LFREM + G+
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 201 -------------SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
P+ TY+ LL C+ KA L + M D I
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD--------I 416
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
TYN +IHG+C + VE+A ++ R + GL PD V Y+T+ISG
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+EG+ EA ++ E M + + D TY+S+I C ++D A +L M+ KG P VV
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TYN+L+ +C+ VD+ + R MA+RGL D +YN +I +
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ P+ TYS L+ LC+ R+ +A LF M + + D TY +++ C +G
Sbjct: 376 DSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
A+ L + KG PD +V+Y +I G C + +++ + R M E GL P
Sbjct: 433 EDAWDLFRSLSCKGLKPD--------VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 3/199 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC GR+ EA+QML++M KG D TY+++I FC ++D L EM +G
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+TYN+++ Y + D A I M R P++ +Y+ ++ C
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
I D TY+ ++ +C + +A+DLFR + G+ PD ++YT +++ C
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR 465
Query: 219 EFTKAFHLHDEMIHKGFLP 237
++ K+ L+ +M G LP
Sbjct: 466 QWDKSDLLYRKMQEDGLLP 484
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQS----------LKRLCREGRIPEAEQMLEVMKC 57
YN +I+G+ AG+ D+ ++++ S L LC R+ +A + E M+
Sbjct: 352 YNTIIQGYF-QAGRPDA-AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 58 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 117
+ LD TY+ VI C + ++ A L + KG P VV+Y +++ +CR+ DK
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 118 AVGILRAMAERGLSP 132
+ + R M E GL P
Sbjct: 470 SDLLYRKMQEDGLLP 484
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 28/160 (17%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRI------------------ 45
+V YN +I GF +SK+V E + + + + G +
Sbjct: 313 DVVTYNTLINGFC--------KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 46 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 105
P+A Q E+ + RTYS ++ C +++ A L M + TYN +
Sbjct: 365 PDAAQ--EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 106 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
+ C+ +V+ A + R+++ +GL PDV SY +IS FC
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 212/484 (43%), Gaps = 58/484 (11%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EG ++ +++ M+ G TY++V+ W+C + +A LL M +KG
Sbjct: 243 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 302
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V TYN L+ CR + + K +LR M +R + P+ +YN +I+ F
Sbjct: 303 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ G+ P+ T+++L++ E EA +F M G++P E++Y LL+ C
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 219 EF--TKAFHLH-----------------DEMIHKGFLPDFVT--------GFSPAIVTYN 251
EF + F++ D + GFL + V G P IVTY+
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI-SGLKIETEDKAIWWLDEDTYD 310
ALI+G C + R + A EI+ + +GLSP+ + YST+I + ++ +AI Y+
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI-----RIYE 537
Query: 311 SLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
+++ D T++ ++ G + A + M+ DG L + V++ LING
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 369 RTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATA 428
+A + G P++ Y LL+ L K +R+ +
Sbjct: 598 EGLKAFSVFDEMTKVG--HHPTFFTYGSLLKG-----------LCKGGHLREAEKFLKSL 644
Query: 429 HTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 488
H D MYN L+ C+S N+ KA +++ EMV P ++ +L
Sbjct: 645 HAV----------PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 489 ISAL 492
IS L
Sbjct: 695 ISGL 698
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 208/467 (44%), Gaps = 28/467 (5%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
REG I ++ ++ +M G T ++++G + S + L EM+ + P V
Sbjct: 175 REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVA 234
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
T+N L+ C S +K+ +++ M + G +P + +YN V+ +C
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
KG+ D TY+ L+ LC R+++ + L R+M + + P+E+TY L+N G+
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
A L +EM+ G SP VT+NALI G +EAL++ M GL+P
Sbjct: 355 LIASQLLNEMLS--------FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 281 DAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 339
V Y ++ GL E D A + + + TY+ +++ G + A+
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG---RITYTGMIDGLCKNGFLDEAV 463
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
L ++MS+DG V YS LING K R + AK + I G P+ +Y L+
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL--SPNGIIYSTLIY 521
Query: 400 NCSN-SEFKSLVELVKDYSMRDLSDDAATAH---TTMLHLKNKTDGEN-----KTDGGMY 450
NC K + + + + + D T + T++ + E +DG +
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 451 NLLIFE-----HCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
N + F+ + S KA++++ EM GH P F+ +L+ L
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/537 (23%), Positives = 216/537 (40%), Gaps = 83/537 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCR RI + +L M+ + + +E TY+++I F N K+ A LL+EM++ G SP+
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VT+N+L+ + + +A+ + M +GL+P SY ++ C
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
G+ TY+ +++ LC L EA L EM + G+ PD +TY+ L+N C VG
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 219 EFTKAFHLHDEMIHKGFLPD---------------------------FVTGFSPAIVTYN 251
F A + + G P+ + G + T+N
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETED-KAIWWLDEDT-- 308
L+ LC +V EA E +R M G+ P+ V + +I+G E KA DE T
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 309 --------YDSLMDSL--------------------SYEDT--YSSVMNDYLAEGNMQRA 338
Y SL+ L + DT Y++++ GN+ +A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKART---------REAKRDLL------YIASD 383
+ L +M + L Y+ LI+GL +K +T EA+ ++L D
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732
Query: 384 GFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTT---MLHLKNKTD 440
G + E N ++V +M D T + + N+
Sbjct: 733 GMFKAGQWKAGIYFREQMDN--LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 441 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
G N T YN+L+ + + +V ++ +Y ++ G P + +L+ + + M
Sbjct: 791 GPNLTT---YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 190/413 (46%), Gaps = 32/413 (7%)
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+PSV Y+ L+ Y R + ++ I R M G +P V + N ++
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ + I PD AT++ L+ LC E ++ L ++M + G +P +TY +L+ C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G F A L D M KG D + TYN LIH LC +R+ + +LR M +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDAD--------VCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED-TYSSVMNDYLAEGN 334
+ P+ V Y+T+I+G + + + + + L LS T++++++ +++EGN
Sbjct: 332 RMIHPNEVTYNTLINGF---SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
+ AL++ + M G S V+Y VL++GL K A A+ + + +G + + T
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-VCVGRITYT 447
Query: 395 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT--------- 445
++ C N V L+ + S + D T ++ +++ K G KT
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT-YSALINGFCKV-GRFKTAKEIVCRIY 505
Query: 446 ------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+G +Y+ LI+ CR + +A +Y M+ GH F+ L+++L
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 218/520 (41%), Gaps = 60/520 (11%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+ A MK G+ + TY+ +I C +D A LL+EM G
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +VTY++L+ +C+ A I+ + GLSP+ Y+ +I C
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ +G D T++ L+ +LC +++EA + R M G+ P+ +++ L+N
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
GE KAF + DEM G P F TY +L+ GLC + EA + L+ +
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTF--------FTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 276 MGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
+ + D V Y+T+++ + K KA+ E S++ SY TY+S+++ +G
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD-SY--TYTSLISGLCRKGK 703
Query: 335 MQRALQLDHDM-SRDGYLSSYVAYSVLINGLHKKAR------TREAKRDLLYIAS----- 382
A+ + +R L + V Y+ ++G+ K + RE +L +
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 383 ---DGFLSM-------------------PSYTVYDILLENCSN-SEFKSLVELVKDYSMR 419
DG+ M P+ T Y+ILL S + + L + +
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823
Query: 420 DLSDDAATAHTTMLH-------------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKA 466
+ D T H+ +L LK + D +N+LI + C + ++ A
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 467 YNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN 506
+++ M G + + A++S L+ + + E V++
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 923
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 145/343 (42%), Gaps = 57/343 (16%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D T +++I + + KI+ + LL EM + P++ TYN L+ Y +R V + +
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
R++ G+ PD + + ++ C + +G+ D T++ L+ C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 183 QRLSEAFDLFR-----------------------------------EMLRGGVSPDELTY 207
++ AFDL + EM + G+SP+ Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 208 TRLLNACCLVGEFTKAFHLHDEMI-HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 266
L+N C VG+ AF + +EMI HK P V +A++ L + +EA
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHK---------ICPPNVAESAMVRALAKCGKADEA 988
Query: 267 LEILRGMPEMGLSPDAVCYSTVI-----SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT 321
+LR M +M L P ++T++ +G IE + + + L+ +
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV-------S 1041
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
Y+ ++ A+G+M A +L +M DG+L++ Y LI GL
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 189/476 (39%), Gaps = 35/476 (7%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
LK LC+ G + EAE+ L+ + +D Y++++ C + A +L EM+ +
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERG-LSPDVDSYNRVISKFCXXXXXXXXX 154
P TY SL+ CR+ A+ + RG + P+ Y +
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+ G PD T +++++ ++ + DL EM P+ TY LL+
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
+ + +F L+ +I G LPD +T S L+ G+C + +E L+IL+
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHS--------LVLGICESNMLEIGLKILKAFI 856
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWWLD-EDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
G+ D ++ +IS K + W D SL SL +DT ++++
Sbjct: 857 CRGVEVDRYTFNMLIS--KCCANGEINWAFDLVKVMTSLGISLD-KDTCDAMVSVLNRNH 913
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS---MPS 390
Q + + H+MS+ G Y LINGL + + A ++ + ++ P
Sbjct: 914 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA-----FVVKEEMIAHKICPP 968
Query: 391 YTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHL--KNKTDGEN----- 443
++ + L+ + ++ + TT++HL KN E
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 444 -------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
K D YN+LI C ++ A+ +Y EM G + + ALI L
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L R R E+ +L M +G+ + R Y +I C + I +A + EMIA P
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V +++V A + D+A +LR M + L P + S+ ++ C
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ G+ D +Y+ L+ LC + ++ AF+L+ EM G + TY L+ L
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG-LLAR 1087
Query: 219 E--FTKAFHLHDEMIHKGFL 236
E F+ A + +++ +GF+
Sbjct: 1088 ETAFSGADIILKDLLARGFI 1107
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 203/445 (45%), Gaps = 33/445 (7%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 55
YN +I GF + GK + + G+ +S ++ C++G +A + + M
Sbjct: 276 YNILINGF-SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
G++ TY+ I C+ +ID A LLS M A P VV+YN+L+ Y +
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 390
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
+A + + + P + +YN +I C + IFPD TY++L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
++ LS A +++ EMLR G+ PD YT +G+ KAF LH+EM+
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA--- 507
Query: 236 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE 295
+P + YN I GLC + + +A+E R + +GL PD V Y+TVI G
Sbjct: 508 ----TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 296 TEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 353
+ K + + YD ++ Y TY ++ + G +++A Q +M + G +
Sbjct: 564 GQFK----MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 354 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL-ENCSNSEFKSLVEL 412
+ ++ L+ G+ K EA R L + +G P+ Y +L+ +NC +++ +V+L
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI--PPNKYSYTMLISKNCDFEKWEEVVKL 677
Query: 413 VKDYSMRDLSDDAATAHTTMLHLKN 437
K+ +++ D T HL+
Sbjct: 678 YKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 202/516 (39%), Gaps = 87/516 (16%)
Query: 48 AEQML---EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV----- 99
AE+ L E M KG R + V+ + ++ A + MI G P+V
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 100 ------------------------------VTYNSLVFAYCRRDSVDKAVGILRAMAERG 129
VTYN L+ + + +++A M G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 130 LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAF 189
+ S+N +I +C ++ GI+P +TY+ + ALC R+ +A
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA- 362
Query: 190 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM----IHKGFLPDFVTGFSP 245
RE+L +PD ++Y L++ +G+F +A L D++ IH P
Sbjct: 363 ---RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH------------P 407
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLD 305
+IVTYN LI GLC +E A + M + PD + Y+T++ G ++ + + +
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF-VKNGNLS---MA 463
Query: 306 EDTYDSLMDSLSYEDTYSSVMNDY--LAEGNMQRALQLDHDM-SRDGYLSSYVAYSVLIN 362
+ YD ++ D Y+ L G+ +A +L +M + D + Y+V I+
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 363 GLHKKA---RTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSM 418
GL K + E +R + + +P + Y ++ N +FK L +
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVG-----LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 419 RDLSDDAAT--------AHTTMLHLKNKTDGENKTDG-----GMYNLLIFEHCRSHNVHK 465
+ L T A L + E K G +N L++ C++ N+ +
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 466 AYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEM 501
AY +M G P+ +S LIS D + E+
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 33/200 (16%)
Query: 2 ALNVNIYNGMIRGFATAAGKSDSESKKVG---EAFQSLKRLCREGRIPEAEQMLEVMK-- 56
A ++ IYN I G KVG +A + +++ R G +P+ V++
Sbjct: 512 APDLTIYNVRIDGLC-----------KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 57 --------CKGLF---LDERTYSSVIGWF------CNLNKIDSAHTLLSEMIAKGFSPSV 99
+ L+ L +R Y SVI +F +++ A +EM +G P+V
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+T+N+L++ C+ ++D+A L M E G+ P+ SY +ISK C
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
Query: 160 XVDKGIFPDAATYSSLMEAL 179
+DK I PD T+ +L + L
Sbjct: 681 MLDKEIEPDGYTHRALFKHL 700
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 210/489 (42%), Gaps = 58/489 (11%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ KG+ T S +I FC K+ A + + +++ G+ P V +N+L+ C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
V +A+ ++ M E G P + + N +++ C V+ G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
++ +C + + A +L R+M + D + Y+ +++ C G AF+L +EM KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-- 292
F D I+TYN LI G C R ++ ++LR M + +SP+ V +S +I
Sbjct: 294 FKAD--------IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 293 --KIETEDKAIWWL-------DEDTYDSLMDSLSYED----------------------T 321
K+ D+ + + + TY+SL+D E+ T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
++ ++N Y + L+L +MS G +++ V Y+ L+ G + + AK+ +
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 440
S P Y ILL+ C N E + +E+ + D + + N +
Sbjct: 466 SRRV--RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 441 GEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLA 487
++ K D YN++I E CR ++ KA ++ +M GHAP +
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583
Query: 488 LISA-LDDD 495
LI A L DD
Sbjct: 584 LIRAHLGDD 592
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 32/334 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC++G + A + M+ KG D TY+++IG FCN + D LL +MI + SP+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVT++ L+ ++ + + +A +L+ M +RG++P+ +YN +I FC
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ KG PD T++ L+ C R+ + +LFREM GV + +TY L+ C G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A L EM+ + PD IV+Y L+ GLC +E+ALEI + + +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPD--------IVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 279 SPDAVCYSTVISGLKIETEDKAIW-----------WLDEDTYDSLMDSLSYEDTYSSVMN 327
D Y +I G+ ++ W LD Y+ ++ L +D+ S
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS---- 560
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
+A L M+ +G+ + Y++LI
Sbjct: 561 ---------KADILFRKMTEEGHAPDELTYNILI 585
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 8/257 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L +C+ G+ A ++L M+ + + LD YS +I C +D+A L +EM KGF
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
++TYN+L+ +C D +LR M +R +SP+V +++ +I F
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ +GI P+ TY+SL++ C E RL EA + M+ G PD +T+ L+N C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
L EM +G + + VTYN L+ G C ++E A ++ + M
Sbjct: 415 KANRIDDGLELFREMSLRGVIAN--------TVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 276 MGLSPDAVCYSTVISGL 292
+ PD V Y ++ GL
Sbjct: 467 RRVRPDIVSYKILLDGL 483
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 211/506 (41%), Gaps = 72/506 (14%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C RI +A +++ M G D T++++I G F + NK A L+ M+ +G P+
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPN 149
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+VTY +V C+R +D A +L M + DV +N +I C
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
KGI P+ TYSSL+ LC R S+A L +M+ ++P+ +T+ L++A G
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+F +A LHD+MI + PD I TYN+LI+G C DR+++A ++ M
Sbjct: 270 KFVEAEKLHDDMIKRSIDPD--------IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
PD Y+T+I G + ++
Sbjct: 322 FPDLDTYNTLIKG-------------------------------------FCKSKRVEDG 344
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+L +MS G + V Y+ LI GL A++ + SDG P Y ILL
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV--PPDIMTYSILL 402
Query: 399 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEH 457
+ C+N + + +E V DY + E K D +Y +I
Sbjct: 403 DGLCNNGKLEKALE-VFDYMQK---------------------SEIKLDIYIYTTMIEGM 440
Query: 458 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDS 517
C++ V ++++ + G P++ + +IS L R+ E ++ L DS
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 518 EQLKVLSEINVTKSEIYALLDVLAEM 543
L ++ + A +++ EM
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREM 526
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 23/346 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + +A + + M+ KG+ + TYSS+I C+ + A LLS+MI K +P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+VT+N+L+ A+ + +A + M +R + PD+ +YN +I+ FC
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V K FPD TY++L++ C +R+ + +LFREM G+ D +TYT L+ G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A + +M+ G PD I+TY+ L+ GLC ++E+ALE+ M + +
Sbjct: 375 DCDNAQKVFKQMVSDGVPPD--------IMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED------TYSSVMNDYLAE 332
D Y+T+I G+ + W L SLS + TY+++++ ++
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGW--------DLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 378
+Q A L M DG L Y+ LI H + + A +L+
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRA-HLRDGDKAASAELI 523
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 176/405 (43%), Gaps = 27/405 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G I A +L M+ + D ++++I C +D A L EM KG P+
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY+SL+ C A +L M E+ ++P++ ++N +I F
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I PD TY+SL+ C+ RL +A +F M+ PD TY L+ C
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
L EM H+G + D VTY LI GL + A ++ + M G+
Sbjct: 340 RVEDGTELFREMSHRGLVGD--------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 279 SPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAE 332
PD + YS ++ GL K+E KA+ + +D + S D Y++++
Sbjct: 392 PPDIMTYSILLDGLCNNGKLE---KAL-----EVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G + L +S G + V Y+ +I+GL K +EA L + DG +P
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG--PLPDSG 501
Query: 393 VYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TTMLH 434
Y+ L+ + + + + EL+++ DA+T MLH
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 546
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 149/363 (41%), Gaps = 43/363 (11%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
P ++ L+ A+ ++ L +M R G+S + TY L+N C + + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
L +M+ G+ P+IVT ++L++G C R+ +A+ ++ M EMG PD + +
Sbjct: 67 LLGKMMK--------LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 286 STVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHD 344
+T+I GL + + +A+ +D +L TY V+N G++ A L +
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV---TYGVVVNGLCKRGDIDLAFNLLNK 175
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 403
M + V ++ +I+ L K +A + + G P+ Y L+ CS
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSY 233
Query: 404 SEFKSLVELVKDYSMRDLSDDAATAHTTM--------------LH---LKNKTDGENKTD 446
+ +L+ D + ++ + T + + LH +K D + T
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT- 292
Query: 447 GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYN 499
YN LI C + KA M+ MV P + + LI D ++
Sbjct: 293 ---YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 500 EMS 502
EMS
Sbjct: 350 EMS 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC G++ +A ++ + M+ + LD Y+++I C K+D L + KG
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
P+VVTYN+++ C + + +A +L+ M E G PD +YN +I
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 181/377 (48%), Gaps = 17/377 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLN---KIDSAHTLLSEMIAKGF 95
LC+ G++ +A ++E MK G + +Y+++I +C L K+ A +L EM+
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
SP++ T+N L+ + + D++ ++ + + M ++ + P+V SYN +I+ C
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V G+ P+ TY++L+ C L EA D+F + G P Y L++A C
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+G+ F L +EM +G +PD + TYN LI GLC +E A ++ +
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPD--------VGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
GL PD V + ++ G + E + L ++ S M TY+ VM Y EGN+
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM--SKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 336 QRALQLDHDMSRDGYLSSYVA-YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
+ A + M ++ L VA Y+VL+ G +K + +A L + G + P+ Y
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV--PNRITY 579
Query: 395 DILLENCSNSEFKSLVE 411
+I+ E + F +E
Sbjct: 580 EIVKEEMVDQGFVPDIE 596
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 163/400 (40%), Gaps = 74/400 (18%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
N+ + EMI + P+V T+N ++ A C+ ++KA ++ M G SP+V SY
Sbjct: 202 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 261
Query: 138 NRVISKFCX---XXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFRE 194
N +I +C V+ + P+ T++ L++ + L + +F+E
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 195 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 254
ML V P+ ++Y L+N C G+ ++A + D+M+ G P ++TYNALI
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS--------AGVQPNLITYNALI 373
Query: 255 HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMD 314
+G C D ++EAL++ + G P Y+ +I D Y L
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI-----------------DAYCKL-- 414
Query: 315 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
G + L +M R+G + Y+ LI GL + AK
Sbjct: 415 ------------------GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 375 RDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 433
+ + S G +P + IL+E C E + L+K+ S L H T
Sbjct: 457 KLFDQLTSKG---LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK----PRHLT-- 507
Query: 434 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 473
YN+++ +C+ N+ A NM +M
Sbjct: 508 ----------------YNIVMKGYCKEGNLKAATNMRTQM 531
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 54/321 (16%)
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
A + LM AL E R ++ +++EM+R + P+ T+ ++NA C G+ KA + +
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL---DRVEEALEILRGMPEMGLSPDAVCY 285
+M V G SP +V+YN LI G C L ++ +A +L+ M E +SP+ +
Sbjct: 248 DMK--------VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF 299
Query: 286 STVISGLKIETEDKAIWWLDED------TYDSLMDSLSYED--TYSSVMNDYLAEGNMQR 337
+ +I G +W D++ + ++D + +Y+S++N G +
Sbjct: 300 NILIDG----------FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
A+ + M G + + Y+ LING K +EA ++ + G ++P+ +Y++L
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD--MFGSVKGQGAVPTTRMYNML 407
Query: 398 LENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN-KTDGGMYNLLIFE 456
++ Y DD LK + + E D G YN LI
Sbjct: 408 ID---------------AYCKLGKIDDG-------FALKEEMEREGIVPDVGTYNCLIAG 445
Query: 457 HCRSHNVHKAYNMYMEMVHYG 477
CR+ N+ A ++ ++ G
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG 466
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 14/325 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC++G +A + M+ KG+ D TYSS+IG CN K D +L EMI + P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVT+++L+ + + + +A + M RG++PD +YN +I FC
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V KG PD TYS L+ + C +R+ + LFRE+ G+ P+ +TY L+ C G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A L EM+ + G P++VTY L+ GLC + +ALEI M + +
Sbjct: 435 KLNAAKELFQEMVSR--------GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQ 336
+ Y+ +I G+ ++ W L + SL D D TY+ ++ +G++
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSL----FCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLI 361
A L M DG Y++LI
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILI 567
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 175/404 (43%), Gaps = 13/404 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L RLC+ G A + M+ + + YS VI C D A +L +EM KG
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
VVTY+SL+ C D +LR M R + PDV +++ +I F
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ +GI PD TY+SL++ C E L EA +F M+ G PD +TY+ L+N+ C
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
L E+ KG +P+ +TYN L+ G C ++ A E+ + M
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPN--------TITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
G+ P V Y ++ GL E + E S M +L Y+ +++ +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM-TLGI-GIYNIIIHGMCNASKV 506
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
A L +S G V Y+V+I GL KK EA + DG P Y+
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG--CTPDDFTYN 564
Query: 396 ILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 438
IL+ + S S VEL+++ + S D++T + L ++
Sbjct: 565 ILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 198/457 (43%), Gaps = 35/457 (7%)
Query: 57 CKGLFL-----DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
CKG+ L D T + +I +C K+ A ++L G+ P +T+++LV +C
Sbjct: 93 CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 152
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
V +AV ++ M E PD+ + + +I+ C V+ G PD T
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
Y ++ LC + A DLFR+M + + Y+ ++++ C G F A L +EM
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
KG D +VTY++LI GLC + ++ ++LR M + PD V +S +I
Sbjct: 273 MKGIKAD--------VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 292 LKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
E + ++ Y+ ++ D TY+S+++ + E + A Q+ M G
Sbjct: 325 FVKEGK----LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL-LENCSNSEFKS 408
V YS+LIN K R + R I+S G + P+ Y+ L L C + + +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI--PNTITYNTLVLGFCQSGKLNA 438
Query: 409 LVELVKDYSMRDLSDDAATAHTTM------------LHLKNKTDGENKTDG-GMYNLLIF 455
EL ++ R + T + L + K T G G+YN++I
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 456 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
C + V A++++ + G P + + +I L
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQM 51
N YN ++ GF +GK ++ + E L LC G + +A ++
Sbjct: 419 NTITYNTLVLGFC-QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
E M+ + L Y+ +I CN +K+D A +L + KG P VVTYN ++ C+
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
+ S+ +A + R M E G +PD +YN +I
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 205/459 (44%), Gaps = 37/459 (8%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K L EG++ EA +++ M G D TY+S++ C A LL +M +
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
V TY++++ + CR +D A+ + + M +G+ V +YN ++ C
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V + I P+ T++ L++ E +L EA +L++EM+ G+SP+ +TY L++ C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+ ++A ++ D M+ PD IVT+ +LI G C + RV++ +++ R + +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPD--------IVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEG 333
GL +AV YS ++ G + K L E+ + ++ D TY +++ G
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIK----LAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
+++AL++ D+ + V Y+ +I G+ K + +A + G P+
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV--KPNVMT 510
Query: 394 YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 453
Y +++ L + + +L K + DG N + YN L
Sbjct: 511 YTVMISG--------------------LCKKGSLSEANILLRKMEEDG-NAPNDCTYNTL 549
Query: 454 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
I H R ++ + + EM G + S+ +I L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 182/433 (42%), Gaps = 74/433 (17%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D T++++I K+ A L+ M+ G P VVTYNS+V CR A+ +L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
R M ER + DV +Y+ +I C KGI TY+SL+ LC
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ ++ L ++M+ + P+ +T+ LL+ G+ +A L+ EMI +G
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI------- 329
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIW 302
SP I+TYN L+ G C +R+ EA +L M SPD V ++++I G
Sbjct: 330 -SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG----------- 377
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
Y + +++ ++S+ G +++ V YS+L+
Sbjct: 378 --------------------------YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 363 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 421
G + + + A+ + S G L P Y ILL+ C N + + +E+ +D
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVL--PDVMTYGILLDGLCDNGKLEKALEIFEDLQ---- 465
Query: 422 SDDAATAHTTMLHLKNKTDGENKTDGG--MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 479
++K D G MY +I C+ V A+N++ + G
Sbjct: 466 --------------------KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 480 PHMFSVLALISAL 492
P++ + +IS L
Sbjct: 506 PNVMTYTVMISGL 518
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 43/422 (10%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K D A L EMI PS+V ++ A R + + + + G++ ++ + N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I+ FC + G PD T+++L++ L +E ++SEA L M+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G PD +TY ++N C G+ + A L +M + D + TY+ +I LC
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD--------VFTYSTIIDSLC 239
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY 318
++ A+ + + M G+ V Y++++ GL KA W D L D +S
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC-----KAGKWNDGALL--LKDMVSR 292
Query: 319 E-----DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
E T++ +++ ++ EG +Q A +L +M G + + Y+ L++G + R EA
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 374 KRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 433
+ D+++ N + + + L+K Y M DD M
Sbjct: 353 N-----------------NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG------MK 389
Query: 434 HLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALD 493
+N + + Y++L+ C+S + A ++ EMV +G P + + L+ L
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 494 DD 495
D+
Sbjct: 450 DN 451
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 216/502 (43%), Gaps = 49/502 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR ++P A +L M G D T SS++ +C+ +I A L+ +M + P+
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VT+N+L+ + +AV ++ M RG PD+ +Y V++ C
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
I D Y+++++ALC + +++A +LF EM G+ P+ +TY L+ C G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 251
++ A L +MI + P+ VT P I TY+
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYD 310
+LI+G C DR++EA + M P+ V Y+T+I G K + ++ + E +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
L+ + TY++++ G+ A ++ M DG + YS+L++GL K +
Sbjct: 425 GLVGNTV---TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAH 429
+A Y+ P Y+I++E C + + +L S++ + + +
Sbjct: 482 EKALVVFEYLQKSKM--EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN-VIIY 538
Query: 430 TTMLH------LKNKTDG---ENKTDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVH 475
TTM+ LK + D E K DG G YN LI R + + + EM
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 476 YGHAPHMFSVLALISALDDDRM 497
G ++ +I+ L D R+
Sbjct: 599 CGFVGDASTISMVINMLHDGRL 620
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 162/340 (47%), Gaps = 21/340 (6%)
Query: 32 AFQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
+ SL R LC GR +A ++L M + + + T+S++I F K+ A L EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
I + P + TY+SL+ +C D +D+A + M + P+V +YN +I FC
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
+G+ + TY++L++ L A +F++M+ GV PD +TY+ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
L+ C G+ KA + + + PD I TYN +I G+C +VE+ ++
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPD--------IYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 271 RGMPEMGLSPDAVCYSTVIS-----GLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 325
+ G+ P+ + Y+T+IS GLK E D + ED +L TY+++
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLK-EEADALFREMKED------GTLPNSGTYNTL 576
Query: 326 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
+ L +G+ + +L +M G++ S++IN LH
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 202/480 (42%), Gaps = 73/480 (15%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D +Y+ +I FC +++ A +L +M+ G+ P +VT +SL+ YC + +AV ++
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M P+ ++N +I V +G PD TY +++ LC
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ A L ++M +G + D + YT +++A C A +L EM +KG P+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN---- 289
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI-----SGLKIETE 297
+VTYN+LI LC R +A +L M E ++P+ V +S +I G +E E
Sbjct: 290 ----VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 298 ---DKAIWW-LDED--TYDSLMDSLSYED----------------------TYSSVMNDY 329
D+ I +D D TY SL++ D TY++++ +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
++ ++L +MS+ G + + V Y+ LI GL + A++ + SDG P
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV--PP 463
Query: 390 SYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGG 448
Y ILL+ C + + + + + + D T
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT--------------------- 502
Query: 449 MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYNEM 501
YN++I C++ V ++++ + G P++ +IS + D ++ EM
Sbjct: 503 -YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 189/450 (42%), Gaps = 70/450 (15%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K+D A L EM+ PS+V +N L+ A + + D + + M +S D+ SYN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I+ FC + G PD T SSL+ C +R+SEA L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
P+ +T+ L++ L + ++A L D M+ +G PD + TY +++GLC
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD--------LFTYGTVVNGLC 231
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK------------IETEDKAIWWLDE 306
++ AL +L+ M + + D V Y+T+I L E ++K I +
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NV 290
Query: 307 DTYDSLMDSL----SYED------------------TYSSVMNDYLAEGNMQRALQLDHD 344
TY+SL+ L + D T+S++++ ++ EG + A +L +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CS 402
M + YS LING R EAK L I+ D F P+ Y+ L++ C
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCK 407
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
+ +EL ++ S R L + T YN LI ++ +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVT----------------------YNTLIQGLFQAGD 445
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
A ++ +MV G P + + L+ L
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 146/362 (40%), Gaps = 59/362 (16%)
Query: 163 KGIFPDAATY---SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+G++ AA+Y L + ++ +L +A DLF EM++ P + + +LL+A + +
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 220 FTKAFHLHDEM-------------------IHKGFLPDFVT--------GFSPAIVTYNA 252
F L + M + LP + G+ P IVT ++
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 253 LIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDS 311
L++G C R+ EA+ ++ M M P+ V ++T+I GL + + +A+ +D
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 312 LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 371
L TY +V+N G++ AL L M + + V Y+ +I+ L
Sbjct: 216 CQPDLF---TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 372 EAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHT 430
+A L+ D P+ Y+ L+ C+ + L+ D R ++ + T
Sbjct: 273 DALN--LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT--- 327
Query: 431 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
++ LI + + +A +Y EM+ P +F+ +LI+
Sbjct: 328 -------------------FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 491 AL 492
Sbjct: 369 GF 370
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 165/363 (45%), Gaps = 43/363 (11%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
T S++ FC N+ A +L+ M GF P+VV YN+++ C+ ++ A+ + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
++G+ D +YN +IS V + I P+ +++L++ E L
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
EA +L++EM+R V P+ TY L+N C+ G A ++ D M+ KG PD
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD------- 323
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAI 301
+VTYN LI G C RVE+ +++ M GL DA Y+T+I G K+ K
Sbjct: 324 -VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 302 WWL-------DEDTYDSLMDSLS-----------YED-----------TYSSVMNDYLAE 332
+ D TY+ L+D L ED TY+ ++
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
++ A L ++R G +AY +I+GL +K REA + + DGF MPS
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF--MPSER 500
Query: 393 VYD 395
+YD
Sbjct: 501 IYD 503
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 37/322 (11%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + A ++ M+ KG+ D TY+++I N + A LL +M+ + P+
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+ + +L+ + + ++ +A + + M R + P+V +YN +I+ FC
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V KG FPD TY++L+ C +R+ + LF EM G+ D TY L++ C G
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 251
+ A + + M+ G PD VT I+TYN
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL---KIETE-DKAIWWLDED 307
+I GLC D+++EA + R + G+ PDA+ Y T+ISGL ++ E DK + ED
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 308 TYDSLMDSLSYEDTYSSVMNDY 329
+ + E Y + D+
Sbjct: 494 GF------MPSERIYDETLRDH 509
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 166/415 (40%), Gaps = 70/415 (16%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K D A +L EM+ PS+V + ++ + + D + + M G+S D+ S+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF- 117
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+ L+ C RLS A L +M++
Sbjct: 118 ----------------------------------TILIHCFCRCSRLSLALALLGKMMKL 143
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G P +T LLN C F +A L D M GF+P+ +V YN +I+GLC
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN--------VVIYNTVINGLC 195
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY 318
+ ALE+ M + G+ DAV Y+T+ISGL L D +D
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 319 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 378
++++++ ++ EGN+ A L +M R + + Y+ LING +AK
Sbjct: 256 --FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 379 YIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 437
+ S G P Y+ L+ C + + ++L + + + L DA T
Sbjct: 314 LMVSKG--CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT---------- 361
Query: 438 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
YN LI +C++ ++ A ++ MV G +P + + L+ L
Sbjct: 362 ------------YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 200/473 (42%), Gaps = 44/473 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF--- 95
CREGR ++E+M+E M+ +GL D T++S I C K+ A + S+M +
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 96 -SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P+ +TYN ++ +C+ ++ A + ++ E + SYN +
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
DKGI P +Y+ LM+ LC LS+A + M R GV PD +TY LL+
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C VG+ A L EM+ LP+ T N L+H L + R+ EA E+LR M
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPN--------AYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 275 EMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
E G D V + ++ GL E DKAI + + ++Y +++D L E
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
N L + YS L+NGL K R EAK L+ G P
Sbjct: 519 NC---------------LPDLITYSTLLNGLCKAGRFAEAKN--LFAEMMGEKLQPDSVA 561
Query: 394 YDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD--------GENK 444
Y+I + + C + S ++KD + T ++ +L L K E K
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Query: 445 TDG-----GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
G YN I C V A N+ EM+ AP++FS LI A
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 165/422 (39%), Gaps = 92/422 (21%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G + +A+ ++ +MK G+ D TY ++ +C++ K+D+A +LL EM+ P+
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
T N L+ + + + +A +LR M E+G D + N ++ C
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 159 -----------------------XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
++ PD TYS+L+ LC R +EA +LF EM
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-------------- 241
+ + PD + Y ++ C G+ + AF + +M KG T
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 242 -------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV 288
G SP I TYN I LC ++VE+A +L M + ++P+ + +
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 289 ISGL-KIETEDKAIWWLDEDTYDSLMDSLSY-EDTYSSVMNDYLAEGNMQRALQLD---- 342
I K+ D A ++ +++ + E YS + N+ LA G + +A +L
Sbjct: 671 IEAFCKVPDFDMA-----QEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVL 725
Query: 343 -------------------------------HDMSRDGYLSSYVAYSVLINGLHKKARTR 371
H M GY A +I+GL K +
Sbjct: 726 DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKK 785
Query: 372 EA 373
EA
Sbjct: 786 EA 787
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 161/395 (40%), Gaps = 48/395 (12%)
Query: 8 YNGMIRGFATAAGKSDS----ESKKVGEAFQSLKR-------LCREGRIPEAEQMLEVMK 56
YN M++GF D+ ES + + SL+ L R G+ EAE +L+ M
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 116
KG+ +Y+ ++ C L + A T++ M G P VTY L+ YC VD
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 117 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 176
A +L+ M P+ + N ++ +KG D T + ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 177 EALCVEQRLSEAFDLFREMLRGGVS-----------------------PDELTYTRLLNA 213
+ LC L +A ++ + M G + PD +TY+ LLN
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C G F +A +L EM+ + PD V YN IH C ++ A +L+ M
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVA--------YNIFIHHFCKQGKISSAFRVLKDM 585
Query: 274 PEMGLSPDAVCYSTVISGLKIETEDKAIWWL-DEDTYDSLMDSLSYEDTYSSVMNDYLAE 332
+ G Y+++I GL I+ + I L DE + ++ TY++ + YL E
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC---TYNTAIQ-YLCE 641
Query: 333 G-NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
G ++ A L +M + + ++ LI K
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 116/261 (44%), Gaps = 17/261 (6%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+ GR EA+ + M + L D Y+ I FC KI SA +L +M KG
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
S+ TYNSL+ ++ + + G++ M E+G+SP++ +YN I C
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS---PDELTYTRLLN 212
+ K I P+ ++ L+EA C FD+ +E+ VS E Y+ + N
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCK----VPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 213 ACCLVGEFTKAFHLHDEMIHKGF-LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
G+ KA L + ++ +GF L F+ Y L+ LC D +E A IL
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFL---------YKDLVESLCKKDELEVASGILH 757
Query: 272 GMPEMGLSPDAVCYSTVISGL 292
M + G D VI GL
Sbjct: 758 KMIDRGYGFDPAALMPVIDGL 778
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 28/377 (7%)
Query: 69 SVIGWFCNLNKIDSAHTLLSEMIAKGF---SPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
SV+ F N ID A +++ F PSV YN L+ + + V+ + + M
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
G++P ++N +I C +KG P+ T+ L+ C
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
+ +L M GV P+++ Y ++++ C G + + ++M +G +PD
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD------- 251
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGM---PEMGLS-PDAVCYSTVISGL-KIETEDKA 300
IVT+N+ I LC +V +A I M +GL P+++ Y+ ++ G K+ + A
Sbjct: 252 -IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 301 IWWLDEDTYDSLM--DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
+ ++S+ D L+ +Y+ + + G A + M+ G S +Y+
Sbjct: 311 -----KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 359 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYS 417
+L++GL K +AK + + +G P Y LL CS + + L+++
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVC--PDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 418 MRDLSDDAATAHTTMLH 434
+ +A T + +LH
Sbjct: 424 RNNCLPNAYTCN-ILLH 439
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 146/361 (40%), Gaps = 64/361 (17%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
P Y+ L+E+ E+R+ L+++M+ G++P T+ L+ A C A L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 227 HDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCF 259
DEM KG P+ T G P V YN ++ C
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 260 LDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDS 315
R +++ +++ M E GL PD V +++ IS L K+ + ++ D Y L
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 316 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 375
S TY+ ++ + G ++ A L + + L+S +Y++ + GL + + EA+
Sbjct: 290 NSI--TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 376 DLLYIASDGFLSMPSYTVYDILLENCSN----SEFKSLVELVKDYSMRDLSDDAATAHTT 431
L + G PS Y+IL++ S+ K++V L+K + DA T
Sbjct: 348 VLKQMTDKGI--GPSIYSYNILMDGLCKLGMLSDAKTIVGLMK---RNGVCPDAVT---- 398
Query: 432 MLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
Y L+ +C V A ++ EM+ P+ ++ L+ +
Sbjct: 399 ------------------YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 492 L 492
L
Sbjct: 441 L 441
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 45/283 (15%)
Query: 8 YNGMIRGFATAAGKSDSE---SKKVGEAFQS--------LKRLCREGRIPEAEQMLEVMK 56
Y+ ++ G A ++++ ++ +GE Q + C++G+I A ++L+ M+
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 116
KG TY+S+I N+I H L+ EM KG SP++ TYN+ + C + V+
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 117 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV--------------- 161
A +L M ++ ++P+V S+ +I FC V
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 162 -------------------DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 202
D+G Y L+E+LC + L A + +M+ G
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 203 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
D +++ +G +A D+M+ + + P
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDP 809
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 202/479 (42%), Gaps = 65/479 (13%)
Query: 33 FQSLKRLCREGR-IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
F L R C + R + EA + +MK KG + T + ++ LN+I++A ++M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
+V T+N ++ C+ + KA G L M G+ P + +YN ++ F
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 211
KG PD TY+ ++ +C E R SE + REM G+ PD ++Y L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILI 334
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
C G+ AF DEM+ +G +P F TYN LIHGL +++E A ++R
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTF--------YTYNTLIHGLFMENKIEAAEILIR 386
Query: 272 GMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 331
+ E G+ D+V Y+ +I+G Y
Sbjct: 387 EIREKGIVLDSVTYNILING-------------------------------------YCQ 409
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
G+ ++A L +M DG + Y+ LI L +K +TREA D L+ G P
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA--DELFEKVVGKGMKPDL 467
Query: 392 TVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN------- 443
+ + L++ +C+ L+K+ M ++ D T + M L + E
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 444 ------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 496
K D YN LI + + + A+ + EM+ G P + + AL+ L ++
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 113/254 (44%), Gaps = 27/254 (10%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
TY+++I NKI++A L+ E+ KG VTYN L+ YC+ KA + M
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
G+ P +Y +I C V KG+ PD ++LM+ C +
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT---- 241
AF L +EM ++PD++TY L+ C G+F +A L EM +G PD ++
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 242 -----------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
GF+P ++TYNAL+ GL E A E+LR M G+
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Query: 279 SPDAVCYSTVISGL 292
P+ + +VI +
Sbjct: 604 VPNDSSFCSVIEAM 617
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 188/436 (43%), Gaps = 47/436 (10%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L C RI EA +++ M G D T+++++ NK A L+ M+ KG
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +VTY +++ C+R D A+ +L M + + DV YN +I C
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
KGI PD TY+ L+ LC R S+A L +ML ++PD + + L++A
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 216 LVGEFTKAFHLHDEMIH-KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G+ +A L+DEM+ K PD +V YN LI G C RVEE +E+ R M
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPD--------VVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 275 EMGLSPDAVCYSTVISG-LKIETEDKAIWWL----------DEDTYDSLMDSLSYED--- 320
+ GL + V Y+T+I G + D A D TY+ L+D L
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 321 -------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
TY++++ G ++ L +S G + V Y+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 362 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRD 420
+G +K EA + + DG +P+ Y+ L+ + + + EL+K+
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDG--PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 421 LSDDAATAH--TTMLH 434
+ DA+T T MLH
Sbjct: 562 FAGDASTFGLVTNMLH 577
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 213/506 (42%), Gaps = 61/506 (12%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLD---ERTYSSVIGW------FCNLNKIDSAHTLLSEM 90
CRE + Q L++ GLF D R + S++ + +NK D +L +M
Sbjct: 42 CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
G S ++ TY+ + +CRR + A+ IL M + G P + + N +++ FC
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
V+ G PD T+++L+ L + SEA L M+ G PD +TY +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFV---------------------------TGF 243
+N C GE A +L ++M D V G
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
P + TYN LI LC R +A +L M E ++PD V ++ +I E K +
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF--VKEGKLVEA 339
Query: 304 LDEDTYDSLMDSL-SYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 360
E YD ++ S + D Y++++ + ++ +++ +MS+ G + + V Y+ L
Sbjct: 340 --EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 361 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMR 419
I+G + A+ + SDG P Y+ILL+ C+N ++ + + + R
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 420 DLSDDAATAHTTMLHLKNKT----DGEN----------KTDGGMYNLLIFEHCRSHNVHK 465
D+ D T +TTM+ K DG + K + Y ++ CR +
Sbjct: 456 DMKLDIVT-YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 466 AYNMYMEMVHYGHAPHMFSVLALISA 491
A +++EM G P+ + LI A
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 216/483 (44%), Gaps = 60/483 (12%)
Query: 21 KSDSESKKVGEAFQSLKRLCREGRIP-------------------EAEQMLEVMKCKGLF 61
K + +K++G+A+ LK + ++G P +A ++ ++M KGL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
L TY+++I +C + D+A LL EM++ GF+ + ++ S++ C D A+
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
+ M R +SP +IS C ++KG D T ++L+ LC
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+L EAF + +E+L G D ++Y L++ CC + +AF DEM+ +G PD
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-- 575
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKA 300
TY+ LI GL +++VEEA++ G+ PD YS +I G K E ++
Sbjct: 576 ------YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 301 IWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
++ +D +M +T Y+ ++ Y G + AL+L DM G + Y+
Sbjct: 630 -----QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 359 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVK-DYS 417
LI G+ +R EAK + +G P+ Y L++ + L ++VK +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGL--EPNVFHYTALIDG-----YGKLGQMVKVECL 737
Query: 418 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 477
+R++ H+ +H T Y ++I + R NV +A + EM G
Sbjct: 738 LREM-------HSKNVHPNKIT----------YTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 478 HAP 480
P
Sbjct: 781 IVP 783
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 26/484 (5%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
GR EA E M +G+ TYS ++ +I A+ +L EM KGF P+V+ Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
N+L+ ++ S++KA+ I M +GLS +YN +I +C +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G + +++S++ LC A EML +SP T L++ C G+ +K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A L + ++KGF+ D T NAL+HGLC +++EA I + + G D
Sbjct: 489 ALELWFQFLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 283 VCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
V Y+T+ISG + + D+A +LDE L +Y TYS ++ ++ A+Q
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD-NY--TYSILICGLFNMNKVEEAIQF 597
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN- 400
D R+G L YSV+I+G K RT E + + S P+ VY+ L+
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV--QPNTVVYNHLIRAY 655
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRS 460
C + +EL +D + +S ++AT + + + + E L+FE R
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK-------LLFEEMRM 708
Query: 461 HNVHKAYNMYMEMVH-YGHAPHMFSVLALISALDDDRMY-NEMSW--VINNTLRSCNLSD 516
+ Y ++ YG M V L+ + ++ N++++ +I R N+++
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 517 SEQL 520
+ +L
Sbjct: 769 ASRL 772
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 155/336 (46%), Gaps = 12/336 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G+ +A ++ KG +D RT ++++ C K+D A + E++ +G
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+YN+L+ C + +D+A L M +RGL PD +Y+ +I
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
G+ PD TYS +++ C +R E + F EM+ V P+ + Y L+ A C G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A L ++M HKG SP TY +LI G+ + RVEEA + M GL
Sbjct: 660 RLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
P+ Y+ +I G K+ K L E ++ + + TY+ ++ Y +GN+
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN---KITYTVMIGGYARDGNVTE 768
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
A +L ++M G + + Y I G K+ EA
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 28/307 (9%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC G++ EA ++ + + +G +D +Y+++I C K+D A L EM+ +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P TY+ L+ + V++A+ G+ PDV +Y+ +I C
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ K + P+ Y+ L+ A C RLS A +L +M G+SP+ TYT L+
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 216 LVGEFTKAFHLHDEMIHKGFLPD------FVTGFS---------------------PAIV 248
++ +A L +EM +G P+ + G+ P +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDED 307
TY +I G V EA +L M E G+ PD++ Y I G LK +A DE+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEE 811
Query: 308 TYDSLMD 314
Y ++++
Sbjct: 812 NYAAIIE 818
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 74/392 (18%)
Query: 105 LVFAYC---RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
L+ YC +RD A+ + +A +G+ P + N +++ V
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSL-VRANEFQKCCEAFDVV 252
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
KG+ PD +++ + A C ++ EA LF +M GV+P+ +T+ +++ + G +
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+AF ++M+ + G P ++TY+ L+ GL R+ +A +L+ M + G P+
Sbjct: 313 EAFMFKEKMVER--------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
+ Y++L+DS ++ G++ +A+++
Sbjct: 365 VI------------------------VYNNLIDS-------------FIEAGSLNKAIEI 387
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF-LSMPSYTVYDILLEN 400
M G + Y+ LI G K + A+R L + S GF ++ S+T LL
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL-- 445
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRS 460
CS+ F S + V + +R++S GG+ LI C+
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMS----------------------PGGGLLTTLISGLCKH 483
Query: 461 HNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
KA ++ + ++ G + AL+ L
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREG-------------------RIPEA 48
YN +I G GK KK+ EAF L + + G ++ EA
Sbjct: 543 YNTLISG---CCGK-----KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 49 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
Q + K G+ D TYS +I C + + EM++K P+ V YN L+ A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
YCR + A+ + M +G+SP+ +Y +I +G+ P+
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
Y++L++ ++ + L REM V P+++TYT ++ G T+A L +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHG 256
EM KG +PD +TY I+G
Sbjct: 775 EMREKGIVPD--------SITYKEFIYG 794
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 4 NVNIYNGMIRGFATAAG-------KSDSESKKVGEAFQSLKRLCRE----GRIPEAEQML 52
N +YN +IR + + + D + K + + L + R+ EA+ +
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ +GL + Y+++I + L ++ LL EM +K P+ +TY ++ Y R
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVI 141
+V +A +L M E+G+ PD +Y I
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFI 792
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 216/483 (44%), Gaps = 60/483 (12%)
Query: 21 KSDSESKKVGEAFQSLKRLCREGRIP-------------------EAEQMLEVMKCKGLF 61
K + +K++G+A+ LK + ++G P +A ++ ++M KGL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
L TY+++I +C + D+A LL EM++ GF+ + ++ S++ C D A+
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
+ M R +SP +IS C ++KG D T ++L+ LC
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+L EAF + +E+L G D ++Y L++ CC + +AF DEM+ +G PD
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-- 575
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKA 300
TY+ LI GL +++VEEA++ G+ PD YS +I G K E ++
Sbjct: 576 ------YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 301 IWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
++ +D +M +T Y+ ++ Y G + AL+L DM G + Y+
Sbjct: 630 -----QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 359 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVK-DYS 417
LI G+ +R EAK + +G P+ Y L++ + L ++VK +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGL--EPNVFHYTALIDG-----YGKLGQMVKVECL 737
Query: 418 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 477
+R++ H+ +H T Y ++I + R NV +A + EM G
Sbjct: 738 LREM-------HSKNVHPNKIT----------YTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 478 HAP 480
P
Sbjct: 781 IVP 783
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 26/484 (5%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
GR EA E M +G+ TYS ++ +I A+ +L EM KGF P+V+ Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
N+L+ ++ S++KA+ I M +GLS +YN +I +C +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G + +++S++ LC A EML +SP T L++ C G+ +K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A L + ++KGF+ D T NAL+HGLC +++EA I + + G D
Sbjct: 489 ALELWFQFLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 283 VCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
V Y+T+ISG + + D+A +LDE L +Y TYS ++ ++ A+Q
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD-NY--TYSILICGLFNMNKVEEAIQF 597
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN- 400
D R+G L YSV+I+G K RT E + + S P+ VY+ L+
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV--QPNTVVYNHLIRAY 655
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRS 460
C + +EL +D + +S ++AT + + + + E L+FE R
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK-------LLFEEMRM 708
Query: 461 HNVHKAYNMYMEMVH-YGHAPHMFSVLALISALDDDRMY-NEMSW--VINNTLRSCNLSD 516
+ Y ++ YG M V L+ + ++ N++++ +I R N+++
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 517 SEQL 520
+ +L
Sbjct: 769 ASRL 772
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 155/336 (46%), Gaps = 12/336 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G+ +A ++ KG +D RT ++++ C K+D A + E++ +G
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+YN+L+ C + +D+A L M +RGL PD +Y+ +I
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
G+ PD TYS +++ C +R E + F EM+ V P+ + Y L+ A C G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A L ++M HKG SP TY +LI G+ + RVEEA + M GL
Sbjct: 660 RLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
P+ Y+ +I G K+ K L E ++ + + TY+ ++ Y +GN+
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN---KITYTVMIGGYARDGNVTE 768
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
A +L ++M G + + Y I G K+ EA
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 28/307 (9%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC G++ EA ++ + + +G +D +Y+++I C K+D A L EM+ +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P TY+ L+ + V++A+ G+ PDV +Y+ +I C
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ K + P+ Y+ L+ A C RLS A +L +M G+SP+ TYT L+
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 216 LVGEFTKAFHLHDEMIHKGFLPD------FVTGFS---------------------PAIV 248
++ +A L +EM +G P+ + G+ P +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDED 307
TY +I G V EA +L M E G+ PD++ Y I G LK +A DE+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEE 811
Query: 308 TYDSLMD 314
Y ++++
Sbjct: 812 NYAAIIE 818
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 162/392 (41%), Gaps = 74/392 (18%)
Query: 105 LVFAYC---RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
L+ YC +RD A+ + +A +G+ P + N +++ V
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSL-VRANEFQKCCEAFDVV 252
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
KG+ PD +++ + A C ++ EA LF +M GV+P+ +T+ +++ + G +
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+AF ++M+ + G P ++TY+ L+ GL R+ +A +L+ M + G P+
Sbjct: 313 EAFMFKEKMVER--------GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
+ Y++L+DS ++ G++ +A+++
Sbjct: 365 VI------------------------VYNNLIDS-------------FIEAGSLNKAIEI 387
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF-LSMPSYTVYDILLEN 400
M G + Y+ LI G K + A+R L + S GF ++ S+T LL
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL-- 445
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRS 460
CS+ F S + V + +R++S GG+ LI C+
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMS----------------------PGGGLLTTLISGLCKH 483
Query: 461 HNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
KA ++ + ++ G + AL+ L
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREG-------------------RIPEA 48
YN +I G GK KK+ EAF L + + G ++ EA
Sbjct: 543 YNTLISG---CCGK-----KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 49 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
Q + K G+ D TYS +I C + + EM++K P+ V YN L+ A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
YCR + A+ + M +G+SP+ +Y +I +G+ P+
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
Y++L++ ++ + L REM V P+++TYT ++ G T+A L +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHG 256
EM KG +PD +TY I+G
Sbjct: 775 EMREKGIVPD--------SITYKEFIYG 794
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 4 NVNIYNGMIRGFATAAG-------KSDSESKKVGEAFQSLKRLCRE----GRIPEAEQML 52
N +YN +IR + + + D + K + + L + R+ EA+ +
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ +GL + Y+++I + L ++ LL EM +K P+ +TY ++ Y R
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVI 141
+V +A +L M E+G+ PD +Y I
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFI 792
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 25/383 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR R+ A +L M G T+ S++ FC +N+I A +L+ M+ G+ P+
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV YN+L+ C+ ++ A+ +L M ++GL DV +YN +++ C
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I PD T+++L++ + L EA +L++EM++ V P+ +TY ++N C+ G
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
A D M KG P+ +VTYN LI G C V+E +++ + M G
Sbjct: 296 RLYDAKKTFDLMASKGCFPN--------VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 279 SPDAVCYSTVISG------LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 332
+ D Y+T+I G L++ D W + ++ T+ +++
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVAL-DIFCWMVSRRVTPDII-------THCILLHGLCVN 399
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G ++ AL DM VAY+++I+GL K + +A + +G P
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV--KPDAR 457
Query: 393 VYDILLEN-CSNSEFKSLVELVK 414
Y I++ C N + EL++
Sbjct: 458 TYTIMILGLCKNGPRREADELIR 480
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 139/300 (46%), Gaps = 19/300 (6%)
Query: 4 NVNIYNGMIRGFATAAGKS-------DSESKKVGEAFQS----LKRLCREGRIPEAEQML 52
NV +YN +I G + + E K +G + L LC GR +A +ML
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
M + + D T++++I F +D A L EMI P+ VTYNS++ C
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ A MA +G P+V +YN +IS FC +G D TY
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L+ C +L A D+F M+ V+PD +T+ LL+ C+ GE A D+M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
++ IV YN +IHGLC D+VE+A E+ +P G+ PDA Y+ +I GL
Sbjct: 415 S---EKYI-----GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 161/353 (45%), Gaps = 14/353 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L C RI +A ++ +M G + Y+++I C +++ A LL+EM KG
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
VVTYN+L+ C A +LR M +R ++PDV ++ +I F
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ + P+ TY+S++ LC+ RL +A F M G P+ +TY L++ C
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
F + DE + K F GF+ I TYN LIHG C + ++ AL+I M
Sbjct: 328 -------KFRMVDEGM-KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEG 333
++PD + + ++ GL + E ++ +D + +S Y Y+ +++
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALV----KFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 386
+++A +L + +G Y+++I GL K REA + + +G +
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 174/416 (41%), Gaps = 26/416 (6%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
+ + A L EM+ PS+V + L+ A + + + M G+S D+ S+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I FC + G P T+ SL+ C+ R+ +AF L M++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G P+ + Y L++ C GE A L +EM KG D +VTYN L+ GLC
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD--------VVTYNTLLTGLC 222
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY 318
+ R +A +LR M + ++PD V ++ +I + L ++ S +D +
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 319 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 378
TY+S++N G + A + M+ G + V Y+ LI+G K E +
Sbjct: 283 --TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 379 YIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH---- 434
++ +GF + +T ++ C + + +++ R ++ D T H +LH
Sbjct: 341 RMSCEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT-HCILLHGLCV 398
Query: 435 ----------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 480
+ + E YN++I C++ V KA+ ++ + G P
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 68/335 (20%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
P ++ L+ A +R ++M G+S D ++T L++ C + A
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ +M+ G+ P+IVT+ +L+HG C ++R+ +A ++ M + G P+ V Y
Sbjct: 128 VLGKMMK--------LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 286 STVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 345
+T+I GL G + AL+L ++M
Sbjct: 180 NTLIDGL-------------------------------------CKNGELNIALELLNEM 202
Query: 346 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 405
+ G + V Y+ L+ GL R +A R L +++ N +
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARML-----------------RDMMKRSINPD 245
Query: 406 FKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHK 465
+ L+ + + D+A + M+ ++ D N T YN +I C ++
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMI--QSSVDPNNVT----YNSIINGLCMHGRLYD 299
Query: 466 AYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
A + M G P++ + LIS RM +E
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 208/463 (44%), Gaps = 45/463 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EGR+ EA ++ M KGL +D TY +++ C + SA LLS+M P
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV Y++++ C+ A + M E+G++P+V +YN +I FC
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+++ I PD T+++L+ A E +L EA L EML + PD +TY ++ C
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
F A H+ D M SP +VT+N +I C RV+E +++LR + GL
Sbjct: 416 RFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS--VMNDYLAEGNM 335
+ Y+T+I G +++ + A +D + ++ DT + ++ + +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAA-----QDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY- 394
+ AL+L + VAY+++I+G+ K ++ E A D F S+P + V
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE--------AWDLFCSLPIHGVEP 570
Query: 395 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 454
D+ N S F +A + +L K K +G ++ D YN LI
Sbjct: 571 DVQTYNVMISGF---------------CGKSAISDANVLFHKMKDNG-HEPDNSTYNTLI 614
Query: 455 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
++ + K+ + EM G + F++ + + D R+
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 24/318 (7%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRL----CREGRIPEAE 49
+A NV YN MI GF + SD++ +++ + L +EG++ EAE
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ + M + +F D TY+S+I FC N+ D A + M SP VVT+N+++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
CR VD+ + +LR ++ RGL + +YN +I FC + G+ PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
T + L+ C ++L EA +LF + + D + Y +++ C + +A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL--- 559
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
F + G P + TYN +I G C + +A + M + G PD Y+T+I
Sbjct: 560 -----FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 290 SG-LKIETEDKAIWWLDE 306
G LK DK+I + E
Sbjct: 615 RGCLKAGEIDKSIELISE 632
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 209/503 (41%), Gaps = 89/503 (17%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R R A + M+ + + L+ +++ +I FC+ +K+ + + ++ GF P VV
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVV 177
Query: 101 TYNSLVFAYCRRDSVDKA---------------VGILRAMAERGLSPDVDSYNRVISKFC 145
T+N+L+ C D + +A V + M E GL+P V ++N +I+ C
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 146 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
V KG+ D TY +++ +C A +L +M + PD +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 206 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 265
Y+ +++ C G + A +L EM+ K G +P + TYN +I G C R +
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEK--------GIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 266 ALEILRGMPEMGLSPDAVCYSTVIS-----GLKIETED------KAIWWLDEDTYDSLM- 313
A +LR M E ++PD + ++ +IS G E E + D TY+S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 314 ---------------DSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
D ++ D T++++++ Y + +QL ++SR G +++
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLEN-CSNSEFKSL 409
Y+ LI+G + D L A D F M P +ILL C N + +
Sbjct: 470 YNTLIHGF--------CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
+EL + M + D YN++I C+ V +A+++
Sbjct: 522 LELFEVIQMSKIDLDTVA----------------------YNIIIHGMCKGSKVDEAWDL 559
Query: 470 YMEMVHYGHAPHMFSVLALISAL 492
+ + +G P + + +IS
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGF 582
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 18/352 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ RLC++G +A+ + M KG+ + TY+ +I FC+ + A LL +MI +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P V+T+N+L+ A + + +A + M R + PD +YN +I FC
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFD 418
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
D PD T++++++ C +R+ E L RE+ R G+ + TY L++ C
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
V A L EMI G PD +T N L++G C +++EEALE+ +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPD--------TITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEG 333
+ D V Y+ +I G+ ++ W D + SL D TY+ +++ + +
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAW----DLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
+ A L H M +G+ Y+ LI G K ++ + + S+GF
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 214/530 (40%), Gaps = 94/530 (17%)
Query: 5 VNIYNGMIRGFATAAGKS--DSESK--KVGEAFQSLKRLCREGRIPE-AEQMLEVMKCKG 59
+N+++ M+R K+ D E K K G + +RL GR+ E + L +
Sbjct: 11 LNVHSSMVRDIEKCEQKTKRDIEKKNTKSGGVRLNSRRLIH-GRVAEKGTKSLPSLTQVT 69
Query: 60 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 119
+E S +F +D A M+ + V N ++ + R + D A+
Sbjct: 70 FEGEELKLKSGSHYF---KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAI 126
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
+ R M R + ++ S+N +I FC G PD T+++L+ L
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 180 CVEQRLSEAF---------------DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
C+E R+SEA LF +M+ G++P +T+ L+N CL G +A
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
L ++M+ KG D +VTY +++G+C + + AL +L M E + PD V
Sbjct: 247 ALVNKMVGKGLHID--------VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 285 YSTVISGLKIETEDKAIWWLDED-----------TYDSLMDSLS----YED--------- 320
YS +I L + +L + TY+ ++D + D
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 321 ---------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 371
T++++++ + EG + A +L +M V Y+ +I G K R
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 372 EAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAHT 430
+AK +AS P ++ +++ C ++L+++ S R L A+T
Sbjct: 419 DAKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL-----VANT 467
Query: 431 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 480
T YN LI C N++ A +++ EM+ +G P
Sbjct: 468 T-----------------TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 187/443 (42%), Gaps = 70/443 (15%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+ E M+ G+ + T + ++ FC +++ A + L +MI G PS+VT+ SL+ +C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R D V A+ + M G P+V YN +I C GI PD
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
TY+SL+ LC R S+A + M + + PD T+ L++AC G ++A ++EM
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
I + PD IVTY+ LI+GLC R++EA E+ M G PD V YS +I+
Sbjct: 283 IRRSLDPD--------IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 291 GLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
G Y ++ ++L +MS+ G
Sbjct: 335 G-------------------------------------YCKSKKVEHGMKLFCEMSQRGV 357
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSL 409
+ + V Y++LI G + + A+ + G P+ Y++LL C N + +
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--HPNIITYNVLLHGLCDNGKIEKA 415
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
+ ++ D + D T YN++I C++ V A+++
Sbjct: 416 LVILADMQKNGMDADIVT----------------------YNIIIRGMCKAGEVADAWDI 453
Query: 470 YMEMVHYGHAPHMFSVLALISAL 492
Y + G P +++ ++ L
Sbjct: 454 YCSLNCQGLMPDIWTYTTMMLGL 476
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ ++ A +L M+ G+ D TY+S+I C+ + A ++S M + P
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V T+N+L+ A + V +A M R L PD+ +Y+ +I C
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V KG FPD TYS L+ C +++ LF EM + GV + +TYT L+ C G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A + M+ G P I+TYN L+HGLC ++E+AL IL M + G+
Sbjct: 376 KLNVAEEIFRRMVF--------CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQ 336
D V Y+ +I G+ E W D Y SL D TY+++M +G +
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAW----DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 337 RALQLDHDMSRDGYLSS 353
A L M DG L +
Sbjct: 484 EADALFRKMKEDGILPN 500
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 154/373 (41%), Gaps = 85/373 (22%)
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-- 241
+L ++ DLF M++ P ++RLL+A + ++ +L ++M G + T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 242 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
G P+IVT+ +L++G C DRV +AL + M M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWL----------DEDTYDSLMDSLS-------- 317
G P+ V Y+T+I GL K + D A+ L D TY+SL+ L
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 318 ------------YED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
Y D T++++++ + EG + A + +M R V YS+LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 364 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLS 422
L +R EA+ ++ S G P Y IL+ C + + + ++L + S R +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKG--CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 423 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 482
+ T Y +LI +CR+ ++ A ++ MV G P++
Sbjct: 359 RNTVT----------------------YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 483 FSVLALISALDDD 495
+ L+ L D+
Sbjct: 397 ITYNVLLHGLCDN 409
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ ++ ++ M +G+ + TY+ +I +C K++ A + M+ G P++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+TYN L+ C ++KA+ IL M + G+ D+ +YN +I C
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 204
+G+ PD TY+++M L + EA LFR+M G+ P+E
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 198/435 (45%), Gaps = 36/435 (8%)
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
LD ++ +I C +I+ + LL E+ GFSP+VV Y +L+ C++ ++KA +
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
M + GL + +Y +I+ + G+FP+ TY+ +M LC
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+ R +AF +F EM GVS + +TY L+ C + +A + D+M
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-------- 332
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAI 301
G +P ++TYN LI G C + ++ +AL + R + GLSP V Y+ ++SG + +
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 302 WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
+ ++ + + + TY+ +++ + NM++A+QL M G + YSVLI
Sbjct: 393 AKMVKEMEERGIK--PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 362 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD-ILLENCSNSEFKSLVELVKDYSMRD 420
+G K + EA R + P+ +Y+ ++L C ++L+K+ ++
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKN--CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 421 LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 480
L+ + A+ Y +I C+ +A + +M+ G P
Sbjct: 509 LAPNVAS----------------------YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Query: 481 HMFSVLALISALDDD 495
S+L+LIS +D
Sbjct: 547 ST-SILSLISRAKND 560
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 142/279 (50%), Gaps = 8/279 (2%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ +LC++GR +A Q+ + M+ +G+ + TY+++IG C K++ A+ ++ +M + G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P+++TYN+L+ +C + KA+ + R + RGLSP + +YN ++S FC
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
++GI P TY+ L++ + +A L M G+ PD TY+ L++ C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+ G+ +A L M+ K P+ V YN +I G C AL++L+ M E
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPN--------EVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMD 314
L+P+ Y +I L E + K L E DS +D
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 12/337 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C++G I +A+ + M GL +ERTY+ +I G F N K + +M G P+
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK-KQGFEMYEKMQEDGVFPN 267
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ TYN ++ C+ A + M ERG+S ++ +YN +I C
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
GI P+ TY++L++ C +L +A L R++ G+SP +TY L++ C G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ + A + EM + G P+ VTY LI D +E+A+++ M E+GL
Sbjct: 388 DTSGAAKMVKEMEER--------GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
PD YS +I G I+ + L + + + E Y++++ Y EG+ RA
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK--NCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 375
L+L +M + +Y +I L K+ +++EA+R
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 206/463 (44%), Gaps = 31/463 (6%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 124
R Y +I + ++ + + +EM+ GF P +N L+ S ++
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
+ + DV S+ +I C + G P+ Y++L++ C +
Sbjct: 155 NKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
+ +A DLF EM + G+ +E TYT L+N G + F ++++M G P+
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN------ 267
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWW 303
+ TYN +++ LC R ++A ++ M E G+S + V Y+T+I GL E + ++A
Sbjct: 268 --LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
+D+ D + +L TY+++++ + G + +AL L D+ G S V Y++L++G
Sbjct: 326 VDQMKSDGINPNLI---TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 364 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVKDYSMRDLS 422
+K T A + + + G PS Y IL++ + S+ + ++L L
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGI--KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 423 DDAATAHTTMLH--------------LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYN 468
D T ++ ++H K+ + + + +YN +I +C+ + ++A
Sbjct: 441 PDVHT-YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 469 MYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRS 511
+ EM AP++ S +I L +R E ++ + S
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCRE ++ EA ++++ MK G+ + TY+++I FC + K+ A +L ++ ++G SPS
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 99 VVTYNSLVFAYCRR-----------------------------------DSVDKAVGILR 123
+VTYN LV +CR+ D+++KA+ +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+M E GL PDV +Y+ +I FC V+K P+ Y++++ C E
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
A L +EM ++P+ +Y ++ C + +A L ++MI G P
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 222/494 (44%), Gaps = 39/494 (7%)
Query: 33 FQSLKRLCREGRI-PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
+ +L C+ G + EA Q+ E MK G D+ TY++++ + ++ A +L+EM+
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
GFSPS+VTYNSL+ AY R +D+A+ + MAE+G PDV +Y ++S F
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 211
+ G P+ T+++ ++ + +E +F E+ G+SPD +T+ LL
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
G ++ + EM GF+P+ T+N LI E+A+ + R
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPE--------RETFNTLISAYSRCGSFEQAMTVYR 513
Query: 272 GMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSL--SYEDTYSSVMNDY 329
M + G++PD Y+TV++ L +W E + D E TY S+++ Y
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALA----RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL----HKKARTREAKRDLLYIASDGF 385
A G + + L H ++ + Y +VL+ L K EA+R + GF
Sbjct: 570 -ANG---KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 386 LSMPSYTVYDILLENCSNSEFKSLVELVKDY-SMRDLSDDAATAHTTM-LHLKNKTDGEN 443
P T + ++ + + V DY R + AT ++ M +H ++ G++
Sbjct: 626 --SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 444 ------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
K D YN +I+ +CR+ + A ++ EM + G P + + I +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 492 LDDDRMYNEMSWVI 505
D M+ E V+
Sbjct: 744 YAADSMFEEAIGVV 757
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVM---KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 92
L L R G ++E++L M +CK +E TY S++ + N +I H+L E+ +
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKP---NELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
P V +LV + D + +A + ERG SPD+ + N ++S +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++G P ATY+SLM ++ ++ RE+L G+ PD ++Y ++
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
A C A + EM + G +PD ++TYN I EEA+ ++R
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPD--------VITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 273 MPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDE 306
M + G P+ Y++++ G K+ +D+A ++++
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
LD + +I ++ SA + + + GFS V +Y SL+ A+ +AV +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALC 180
+ M E G P + +YN +++ F + GI PDA TY++L+
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
EA +F EM G S D++TY LL+ +A + +EM+ +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV--------L 342
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
GFSP+IVTYN+LI ++EA+E+ M E G PD Y+T++SG +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R + +A +L+ MK +G TY+S++ + +L E++AKG P ++
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
+YN++++AYCR + A I M G+ PDV +YN I +
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 197
+ G P+ TY+S+++ C R EA LF E LR
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVEDLR 796
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 169/337 (50%), Gaps = 14/337 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR R+ A L M G T+ S++ FC++N+ A +L+ +++ G+ P+
Sbjct: 124 FCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPN 183
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV YN+++ + C + V+ A+ +L+ M + G+ PDV +YN +I++
Sbjct: 184 VVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILS 243
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ GI PD T+S+L++ E +L EA + EM++ V+P+ +TY L+N C+ G
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A + + ++ KGF P+ VTYN LI+G C RV++ ++IL M G+
Sbjct: 304 LLDEAKKVLNVLVSKGFFPN--------AVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS-SVMNDYLAE-GNMQ 336
D Y+T+ G + A E ++ + D Y+ +++ D L + G +
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSA----AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
+AL D+ + + + Y+++I GL K + +A
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 179/385 (46%), Gaps = 21/385 (5%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G+ D +++++I FC ++ A + L +M+ GF PS+VT+ SLV +C + +A
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ ++ + G P+V YN +I C GI PD TY+SL+
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITR 228
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
L + + +M+R G+SPD +T++ L++ G+ +A ++EMI +
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR----- 283
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KI 294
+P IVTYN+LI+GLC ++EA ++L + G P+AV Y+T+I+G ++
Sbjct: 284 ---SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
Query: 295 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
+ K + + D D D+ +Y Y Y G A ++ M G
Sbjct: 341 DDGMKILCVMSRDGVDG--DTFTYNTLYQG----YCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 355 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELV 413
+++L++GL + +A L + ++ Y+I+++ C + + L
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSK--TVVGIITYNIIIKGLCKADKVEDAWYLF 452
Query: 414 KDYSMRDLSDDAATAHTTMLHLKNK 438
+++ +S D T T M+ L+ K
Sbjct: 453 CSLALKGVSPDVITYITMMIGLRRK 477
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 31/301 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC +G++ A +L+ MK G+ D TY+S+I + + +LS+M+ G SP
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+T+++L+ Y + + +A M +R ++P++ +YN +I+ C
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V KG FP+A TY++L+ C +R+ + + M R GV D TY L C G
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT------GFSP---------------------AIVTYN 251
+F+ A + M+ G PD T G I+TYN
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDS 311
+I GLC D+VE+A + + G+SPD + Y T++ GL+ K +W + Y
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR----RKRLWREAHELYRK 489
Query: 312 L 312
+
Sbjct: 490 M 490
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 184/440 (41%), Gaps = 34/440 (7%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K + A TL +M PS+V ++ L+ A + + + + + R + G+S D+ S+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I FC + G P T+ SL+ C R EA L +++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G P+ + Y ++++ C G+ A + M G PD +VTYN+LI L
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD--------VVTYNSLITRLF 230
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVI-----SGLKIETEDKAIWWLDEDTYDSLM 313
+ IL M MG+SPD + +S +I G +E + + + +++
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 314 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
TY+S++N G + A ++ + + G+ + V Y+ LING K R +
Sbjct: 291 -------TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 374 KRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKD----------YSMRDLSD 423
+ L ++ DG + ++T + C +F + +++ Y+ L D
Sbjct: 344 MKILCVMSRDG-VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 424 ---DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 480
D ++ L++ + YN++I C++ V A+ ++ + G +P
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
Query: 481 HMFSVLALISALDDDRMYNE 500
+ + + ++ L R++ E
Sbjct: 463 DVITYITMMIGLRRKRLWRE 482
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+EG++ EA++ M + + + TY+S+I C +D A +L+ +++KGF P+ V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TYN+L+ YC+ VD + IL M+ G+ D +YN + +C
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V G+ PD T++ L++ LC ++ +A ++ + +TY ++ C +
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGLS 279
A++L + KG PD ++TY ++ GL EA E+ R M E GL
Sbjct: 446 EDAWYLFCSLALKGVSPD--------VITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497
Query: 280 P 280
P
Sbjct: 498 P 498
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 187/434 (43%), Gaps = 49/434 (11%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
+E TYS+V+ C K++ A L K PSVV++NS++ YC+ VD A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ + GL P V S+N +I+ C G+ PD+ TY+ L + +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+S A+++ R+ML G+SPD +TYT LL C +G L +M+ +GF +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN---- 361
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAI 301
+I+ + ++ GLC R++EAL + M GLSPD V YS VI GL K+ D A+
Sbjct: 362 ---SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 302 WWLDE------------------------------DTYDSLMDSLSYEDT--YSSVMNDY 329
W DE DSL+ S D Y+ V++ Y
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
G ++ AL+L + G S ++ LI G K EA++ L I G P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--AP 536
Query: 390 SYTVYDILLE---NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTD 446
S Y L++ NC N+ KS+ EL ++ + T L EN
Sbjct: 537 SVVSYTTLMDAYANCGNT--KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 447 GGMYNLLIFEHCRS 460
+ IFE C+
Sbjct: 595 --VLRERIFEKCKQ 606
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 166/390 (42%), Gaps = 67/390 (17%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCR+ ++ +A L + K + +++S++ +C L +D A + ++ G PS
Sbjct: 197 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V ++N L+ C S+ +A+ + M + G+ PD +YN + F
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 159 XXVDKGIFPDAATY------------------------------------SSLMEALCVE 182
+DKG+ PD TY S ++ LC
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT- 241
R+ EA LF +M G+SPD + Y+ +++ C +G+F A L+DEM K LP+ T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 242 --------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G + IV YN +I G +EEALE+ + + E
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 276 MGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
G++P ++++I G K + +A LD L S+ +Y+++M+ Y GN
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV---SYTTLMDAYANCGN 553
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+ +L +M +G + V YSV+ GL
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 53/377 (14%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+ GRI EA + MK GL D YS VI C L K D A L EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+ T+ +L+ C++ + +A +L ++ G + D+ YN VI +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
++ GI P AT++SL+ C Q ++EA + + G++P ++YT L++A
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC-----------FLDRV- 263
G L EM + G P VTY+ + GLC +R+
Sbjct: 550 NCGNTKSIDELRREMKAE--------GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLD----------EDTYDSL 312
E+ + LR M G+ PD + Y+T+I L +++ A +L+ TY+ L
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 313 MDSLSY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
+DSL + Y++++ + +G+ + A++L H + G+
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 351 LSSYVAYSVLINGLHKK 367
S YS +IN L ++
Sbjct: 722 NVSIRDYSAVINRLCRR 738
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 185/423 (43%), Gaps = 42/423 (9%)
Query: 86 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
L E + + + + ++ L+F R VD ++ IL+ M ++ L+ SYN V+ F
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF- 169
Query: 146 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
DK + TYS++++ LC +Q+L +A R + P +
Sbjct: 170 --RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 206 TYTRLLNACCLVG--EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 263
++ +++ C +G + K+F F G P++ ++N LI+GLC + +
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE-DTY 322
EALE+ M + G+ PD+V Y+ + G + W + D D LS + TY
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSPDVITY 330
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
+ ++ GN+ L L DM G+ L+S + SV+++GL K R EA +
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK-- 438
+DG P Y I++ C +F + L + + + ++ T +L L K
Sbjct: 391 ADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 439 ------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 486
+ GE D +YN++I + +S + +A ++ ++ G P + +
Sbjct: 449 LLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 487 ALI 489
+LI
Sbjct: 508 SLI 510
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 30 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 89
G ++ + RE + +Q L M+ +G+ D+ TY+++I + C + + A L
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
M ++ S TYN L+ + C + KA + ++ E+ +S +Y +I C
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
+ +G YS+++ LC
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 185/421 (43%), Gaps = 64/421 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ RI +A ++L+ M+ K D TY+ +IG C+ K+D A +L+++++ P+
Sbjct: 168 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 227
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+TY L+ A VD+A+ ++ M RGL PD+ +YN +I C
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 159 XXVDKGIFPD-----------------------------------AATYSSLMEALCVEQ 183
KG PD TYS L+ LC +
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
++ EA +L + M G++PD +Y L+ A C G A + MI G LPD
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD----- 402
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
IV YN ++ LC + ++ALEI + E+G SP++ Y+T+ S L W
Sbjct: 403 ---IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL----------W 449
Query: 304 LDEDTYDSLMDSLSY--------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 355
D +L L E TY+S+++ EG + A +L DM + S V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 356 AYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS-LVELVK 414
Y++++ G K R +A L + +G P+ T Y +L+E + +++ +EL
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNG--CRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 415 D 415
D
Sbjct: 568 D 568
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 197/450 (43%), Gaps = 38/450 (8%)
Query: 45 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
IP+A +++E+++ G D Y+++I FC +N+ID A +L M +K FSP VTYN
Sbjct: 140 IPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
++ + C R +D A+ +L + P V +Y +I + +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
+ PD TY++++ +C E + AF++ R + G PD ++Y LL A G++ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
L +M F P +VTY+ LI LC ++EEA+ +L+ M E GL+PDA
Sbjct: 319 KLMTKM--------FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 285 YSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 343
Y +I+ E D AI +L+ D + + Y++V+ G +AL++
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV---NYNTVLATLCKNGKADQALEIFG 427
Query: 344 DMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CS 402
+ G + +Y+ + + L A +L + S+G P Y+ ++ C
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI--DPDEITYNSMISCLCR 485
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
EL+ D + T YN+++ C++H
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVT----------------------YNIVLLGFCKAHR 523
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ A N+ MV G P+ + LI +
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 27/284 (9%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ +C+EG + A +M+ ++ KG D +Y+ ++ N K + L+++M ++
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+VVTY+ L+ CR +++A+ +L+ M E+GL+PD SY+ +I+ FC
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G PD Y++++ LC + +A ++F ++ G SP+ +Y + +A
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIV 248
G+ +A H+ EM+ G PD +T F P++V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
TYN ++ G C R+E+A+ +L M G P+ Y+ +I G+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 191/447 (42%), Gaps = 50/447 (11%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
N I+S H LL M+ KG++P V+ L+ + ++ KAV ++ + + G PDV +Y
Sbjct: 104 NYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 138 NRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 197
N +I+ FC K PD TY+ ++ +LC +L A + ++L
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 198 GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGL 257
P +TYT L+ A L G +A L DEM+ +G PD + TYN +I G+
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD--------MFTYNTIIRGM 273
Query: 258 CFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLS 317
C V+ A E++R + G PD + Y+ ++ L ++ W + + LM +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL----NQGKW----EEGEKLMTKMF 325
Query: 318 YED------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 371
E TYS ++ +G ++ A+ L M G +Y LI ++ R
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 372 EAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHT 430
A L + SDG L P Y+ +L C N + +E+ S ++++
Sbjct: 386 VAIEFLETMISDGCL--PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS--- 440
Query: 431 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
YN + S + +A +M +EM+ G P + ++IS
Sbjct: 441 -------------------YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 491 ALDDDRMYNEMSWVINNTLRSCNLSDS 517
L + M +E ++ + +RSC S
Sbjct: 482 CLCREGMVDEAFELLVD-MRSCEFHPS 507
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 59/314 (18%)
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPD------FVTGF------------------- 243
++ + C G + ++ HL + M+ KG+ PD + GF
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 244 -SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAI 301
P + YNALI+G C ++R+++A +L M SPD V Y+ +I L + D A+
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 302 WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
L++ D+ ++ TY+ ++ + EG + AL+L +M G Y+ +I
Sbjct: 214 KVLNQLLSDNCQPTVI---TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 362 NGLHKKA---RTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 418
G+ K+ R E R+L + P Y+ILL ++L+ K
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCE-----PDVISYNILL--------RALLNQGK---- 313
Query: 419 RDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 478
++ T M K D T Y++LI CR + +A N+ M G
Sbjct: 314 ---WEEGEKLMTKM--FSEKCDPNVVT----YSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 479 APHMFSVLALISAL 492
P +S LI+A
Sbjct: 365 TPDAYSYDPLIAAF 378
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 181/375 (48%), Gaps = 17/375 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKG 94
L C RI +A +++ M G D T++++I G F + NK A L+ M+ +G
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH-NKASEAVALIDRMVQRG 213
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P +VTY ++V C+R D A+ +L M + +V Y+ VI C
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+KG+ P+ TYSSL+ LC R S+A L +M+ ++P+ +T++ L++A
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G+ KA L++EMI + P I TY++LI+G C LDR+ EA ++L M
Sbjct: 334 VKKGKLVKAEKLYEEMIKR--------SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 275 EMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
P+ V Y+T+I+G K + DK + E + L+ + TY+++++ +
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV---TYTTLIHGFFQAR 442
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
+ A + M G + + Y++L++GL K + +A Y+ P
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM--EPDIYT 500
Query: 394 YDILLEN-CSNSEFK 407
Y+I++E C ++K
Sbjct: 501 YNIMIEGMCKAGKWK 515
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 173/387 (44%), Gaps = 28/387 (7%)
Query: 59 GLFLDERTYSSVIGW------FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
G+ R + S+I + +NK D + +M G S ++ TYN L+ +CR
Sbjct: 67 GVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRC 126
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ A+ +L M + G PD+ + N +++ FC V+ G PD T+
Sbjct: 127 SRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF 186
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L+ L + + SEA L M++ G PD +TY ++N C G+ A +L ++M
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-- 244
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+V Y+ +I LC ++AL + M G+ P+ + YS++IS L
Sbjct: 245 ------EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 293 KIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
W D S M T+S++++ ++ +G + +A +L +M +
Sbjct: 299 CNYGR-----WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CSNSEFK 407
+ YS LING R EAK+ L L I D +P+ Y+ L+ C
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD---CLPNVVTYNTLINGFCKAKRVD 410
Query: 408 SLVELVKDYSMRDLSDDAATAHTTMLH 434
+EL ++ S R L + T +TT++H
Sbjct: 411 KGMELFREMSQRGLVGNTVT-YTTLIH 436
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 137/329 (41%), Gaps = 37/329 (11%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
FP +S L+ A+ + +M G+S + TY L+N C + A
Sbjct: 75 FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
L +M+ G+ PD IVT N+L++G C +R+ +A+ ++ M EMG PD V +
Sbjct: 135 LLGKMMKLGYEPD--------IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF 186
Query: 286 STVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHD 344
+T+I GL + + +A+ +D L TY +V+N G+ AL L +
Sbjct: 187 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV---TYGAVVNGLCKRGDTDLALNLLNK 243
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSN 403
M ++ V YS +I+ L K +A + + G P+ Y L+ C+
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV--RPNVITYSSLISCLCNY 301
Query: 404 SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNV 463
+ L+ D R ++ + T ++ LI + +
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVT----------------------FSALIDAFVKKGKL 339
Query: 464 HKAYNMYMEMVHYGHAPHMFSVLALISAL 492
KA +Y EM+ P++F+ +LI+
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 170/346 (49%), Gaps = 23/346 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + +A + + M+ KG+ + TYSS+I C+ + A LLS+MI K +P+
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+VT+N+L+ A+ + +A + M +R + PD+ +YN +++ FC
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V K FPD TY++L++ C +R+ + +LFREM G+ D +TYT L+ G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A + +M+ G PD I+TY+ L+ GLC ++E+ALE+ M + +
Sbjct: 450 DCDNAQKVFKQMVSDGVPPD--------IMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED------TYSSVMNDYLAE 332
D Y+T+I G+ + W L SLS + TY+++++ ++
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGW--------DLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 378
+Q A L M DG L + Y+ LI H + + A +L+
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRA-HLRDGDKAASAELI 598
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 189/432 (43%), Gaps = 37/432 (8%)
Query: 44 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
+ EA +++ M +G + TY V+ C D A LL++M A VV +N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
+++ + C+ VD A+ + + M +G+ P+V +Y+ +IS C ++K
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
I P+ T+++L++A E + EA L+ +M++ + PD TY L+N C+ KA
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ + M+ K PD +VTYN LI G C RVE+ E+ R M GL D V
Sbjct: 385 KQMFEFMVSKDCFPD--------VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 284 CYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
Y+T+I GL + + D A + D + + TYS +++ G +++AL++
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM---TYSILLDGLCNNGKLEKALEVF 493
Query: 343 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-C 401
M + Y+ +I G+ K + + ++ G P+ Y+ ++ C
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV--KPNVVTYNTMISGLC 551
Query: 402 SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSH 461
S + L+K K K DG + G YN LI H R
Sbjct: 552 SKRLLQEAYALLK---------------------KMKEDGP-LPNSGTYNTLIRAHLRDG 589
Query: 462 NVHKAYNMYMEM 473
+ + + EM
Sbjct: 590 DKAASAELIREM 601
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 243/578 (42%), Gaps = 85/578 (14%)
Query: 5 VNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDE 64
+ ++ GM++ + S E K+ A +K+ + E Q LE++ GL+
Sbjct: 70 IGLFGGMVK---SRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH--GLY--- 121
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 124
TY+ +I FC ++I A LL +M+ G+ PS+VT +SL+ YC + AV ++
Sbjct: 122 -TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY------------ 172
M E G PD ++ +I V +G P+ TY
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 173 -----------------------SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
++++++LC + + +A +LF+EM G+ P+ +TY+
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
L++ C G ++ A L +MI K +P +VT+NALI + EA ++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEK--------KINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 270 LRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYED--TYSSVM 326
M + + PD Y+++++G + DKA + ++ ++ + D TY++++
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA-----KQMFEFMVSKDCFPDVVTYNTLI 407
Query: 327 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 386
+ ++ +L +MS G + V Y+ LI GL A++ + SDG
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV- 466
Query: 387 SMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT 445
P Y ILL+ C+N + + +E V DY + E K
Sbjct: 467 -PPDIMTYSILLDGLCNNGKLEKALE-VFDYMQK---------------------SEIKL 503
Query: 446 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVI 505
D +Y +I C++ V ++++ + G P++ + +IS L R+ E ++
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 506 NNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 543
L +S L ++ + A +++ EM
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 177/405 (43%), Gaps = 27/405 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G A +L M+ + D ++++I C +D A L EM KG P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY+SL+ C A +L M E+ ++P++ ++N +I F
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I PD TY+SL+ C+ RL +A +F M+ PD +TY L+ C
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
L EM H+G + D VTY LI GL + A ++ + M G+
Sbjct: 415 RVEDGTELFREMSHRGLVGD--------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 279 SPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAE 332
PD + YS ++ GL K+E KA+ + +D + S D Y++++
Sbjct: 467 PPDIMTYSILLDGLCNNGKLE---KAL-----EVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G + L +S G + V Y+ +I+GL K +EA L + DG +P+
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG--PLPNSG 576
Query: 393 VYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--TTMLH 434
Y+ L+ + + + + EL+++ DA+T MLH
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 172/415 (41%), Gaps = 35/415 (8%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K+D A L M+ PS+V +N L+ A + D + + M + + +YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I+ FC + G P T SSL+ C +R+S+A L +M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G PD +T+T L++ L + ++A L D M+ +G P+ +VTY +++GLC
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN--------LVTYGVVVNGLC 236
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLS 317
+ AL +L M + D V ++T+I L K D A+ E + ++
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 318 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 377
TYSS+++ + G A QL DM + V ++ LI+ K+ + EA++
Sbjct: 297 ---TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK-- 351
Query: 378 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 437
+YD +++ + + + LV + M D D A M+
Sbjct: 352 ---------------LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV---- 392
Query: 438 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ D YN LI C+S V ++ EM H G + LI L
Sbjct: 393 --SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 187/434 (43%), Gaps = 49/434 (11%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
+E TYS+V+ C K++ A L K PSVV++NS++ YC+ VD A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ + GL P V S+N +I+ C G+ PD+ TY+ L + +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+S A+++ R+ML G+SPD +TYT LL C +G L +M+ +GF +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN---- 361
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAI 301
+I+ + ++ GLC R++EAL + M GLSPD V YS VI GL K+ D A+
Sbjct: 362 ---SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 302 WWLDE------------------------------DTYDSLMDSLSYEDT--YSSVMNDY 329
W DE DSL+ S D Y+ V++ Y
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
G ++ AL+L + G S ++ LI G K EA++ L I G P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--AP 536
Query: 390 SYTVYDILLE---NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTD 446
S Y L++ NC N+ KS+ EL ++ + T L EN
Sbjct: 537 SVVSYTTLMDAYANCGNT--KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 447 GGMYNLLIFEHCRS 460
+ IFE C+
Sbjct: 595 --VLRERIFEKCKQ 606
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 166/390 (42%), Gaps = 67/390 (17%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCR+ ++ +A L + K + +++S++ +C L +D A + ++ G PS
Sbjct: 197 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V ++N L+ C S+ +A+ + M + G+ PD +YN + F
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 159 XXVDKGIFPDAATY------------------------------------SSLMEALCVE 182
+DKG+ PD TY S ++ LC
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT- 241
R+ EA LF +M G+SPD + Y+ +++ C +G+F A L+DEM K LP+ T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 242 --------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G + IV YN +I G +EEALE+ + + E
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 276 MGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
G++P ++++I G K + +A LD L S+ +Y+++M+ Y GN
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV---SYTTLMDAYANCGN 553
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+ +L +M +G + V YSV+ GL
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 53/377 (14%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+ GRI EA + MK GL D YS VI C L K D A L EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+ T+ +L+ C++ + +A +L ++ G + D+ YN VI +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
++ GI P AT++SL+ C Q ++EA + + G++P ++YT L++A
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC-----------FLDRV- 263
G L EM + G P VTY+ + GLC +R+
Sbjct: 550 NCGNTKSIDELRREMKAE--------GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLD----------EDTYDSL 312
E+ + LR M G+ PD + Y+T+I L +++ A +L+ TY+ L
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 313 MDSLSY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
+DSL + Y++++ + +G+ + A++L H + G+
Sbjct: 662 IDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 351 LSSYVAYSVLINGLHKK 367
S YS +IN L ++
Sbjct: 722 NVSIRDYSAVINRLCRR 738
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 185/423 (43%), Gaps = 42/423 (9%)
Query: 86 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
L E + + + + ++ L+F R VD ++ IL+ M ++ L+ SYN V+ F
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF- 169
Query: 146 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
DK + TYS++++ LC +Q+L +A R + P +
Sbjct: 170 --RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 206 TYTRLLNACCLVG--EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRV 263
++ +++ C +G + K+F F G P++ ++N LI+GLC + +
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE-DTY 322
EALE+ M + G+ PD+V Y+ + G + W + D D LS + TY
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSPDVITY 330
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
+ ++ GN+ L L DM G+ L+S + SV+++GL K R EA +
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK-- 438
+DG P Y I++ C +F + L + + + ++ T +L L K
Sbjct: 391 ADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 439 ------------TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 486
+ GE D +YN++I + +S + +A ++ ++ G P + +
Sbjct: 449 LLEARSLLDSLISSGET-LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 487 ALI 489
+LI
Sbjct: 508 SLI 510
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 30 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 89
G ++ + RE + +Q L M+ +G+ D+ TY+++I + C + + A L
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
M ++ S TYN L+ + C + KA + ++ E+ +S +Y +I C
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
+ +G YS+++ LC
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 15/395 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C RI +A +++ M G D T++++I NK A L+ M+ +G P++
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTY +V C+R +D A +L M + +V Y+ VI C
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KG+ P+ TYSSL+ LC +R S+A L +M+ ++P+ +T+ L++A G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+A L+DEMI + PD I TY++LI+G C DR++EA + M
Sbjct: 346 LVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 280 PDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
P+ V Y+T+I+G K + D+ + E + L+ + TY+++++ + + A
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV---TYTTLIHGFFQARDCDNA 454
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+ M DG + + Y+ L++GL K + +A Y+ P+ Y+I++
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM--EPTIYTYNIMI 512
Query: 399 EN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 432
E C + + +L S++ + D +T +
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 27/281 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ +A + M+ KG+ + TYSS+I CN + A LLS+MI + +P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVT+N+L+ A+ + + +A + M +R + PD+ +Y+ +I+ FC
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ K FP+ TY++L+ C +R+ E +LFREM + G+ + +TYT L++
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 251
+ A + +M+ G P+ +T P I TYN
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+I G+C +VE+ ++ + G+ PD + Y+T+ISG
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 152/348 (43%), Gaps = 10/348 (2%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G I A +L M+ + + YS+VI C D A L +EM KG P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+TY+SL+ C + A +L M ER ++P+V ++N +I F
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I PD TYSSL+ C+ RL EA +F M+ P+ +TY L+N C
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ L EM +G + + VTY LIHG + A + + M G+
Sbjct: 415 RIDEGVELFREMSQRGLVGN--------TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
P+ + Y+T++ GL + + + E S M+ Y TY+ ++ G ++
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY--TYNIMIEGMCKAGKVEDG 524
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 386
L +S G + Y+ +I+G +K EA + DG L
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 205/474 (43%), Gaps = 66/474 (13%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ G+ + TY+ +I FC ++I A LL +M+ G+ PS+VT +SL+ YC
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ AV ++ M E G PD ++ +I V +G P+ TY
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++ LC + AF+L +M + + + Y+ ++++ C A +L EM +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI--- 289
KG P+ ++TY++LI LC +R +A +L M E ++P+ V ++ +I
Sbjct: 289 KGVRPN--------VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 290 --SGLKIETE---DKAIWW-LDED--TYDSLMDSLSYED--------------------- 320
G +E E D+ I +D D TY SL++ D
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 321 -TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
TY++++N + + ++L +MS+ G + + V Y+ LI+G + A+
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 438
+ SDG P+ Y+ LL+ C N + + + +V +Y R S T +T
Sbjct: 461 MVSDGV--HPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQR--SKMEPTIYT-------- 507
Query: 439 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
YN++I C++ V ++++ + G P + +IS
Sbjct: 508 -----------YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+EG++ EAE++ + M + + D TYSS+I FC +++D A + MI+K P+VV
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TYN+L+ +C+ +D+ V + R M++RGL + +Y +I F
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V G+ P+ TY++L++ LC +L +A +F + R + P TY ++ C G+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+ L + KG PD ++ YN +I G C EEA + R M E G P
Sbjct: 522 EDGWDLFCSLSLKGVKPD--------VIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 281 DA 282
D+
Sbjct: 574 DS 575
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 171/391 (43%), Gaps = 47/391 (12%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K+D A L M+ PS+ +N L+ A + D + + M G+S ++ +YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I+ FC + G P T SSL+ C +R+S+A L +M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G PD +T+T L++ L + ++A L D M+ +G P+ +VTY +++GLC
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN--------LVTYGVVVNGLC 236
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDE----------D 307
++ A +L M + + V YSTVI L K ED A+ E
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 308 TYDSLMDSL-SYED---------------------TYSSVMNDYLAEGNMQRALQLDHDM 345
TY SL+ L +YE T++++++ ++ EG + A +L +M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 346 SRDGYLSSYVAYSVLINGLHKKARTREAKRDL-LYIASDGFLSMPSYTVYDILLEN-CSN 403
+ YS LING R EAK L I+ D F P+ Y+ L+ C
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLINGFCKA 413
Query: 404 SEFKSLVELVKDYSMRDLSDDAATAHTTMLH 434
VEL ++ S R L + T +TT++H
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVT-YTTLIH 443
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 63
NV YN +I GF C+ RI E ++ M +GL +
Sbjct: 399 NVVTYNTLINGF------------------------CKAKRIDEGVELFREMSQRGLVGN 434
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
TY+++I F D+A + +M++ G P+++TYN+L+ C+ ++KA+ +
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+ + P + +YN +I C KG+ PD Y++++ C +
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 184 RLSEAFDLFREMLRGGVSPDELT 206
EA LFR+M G PD T
Sbjct: 555 LKEEADALFRKMREDGPLPDSGT 577
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 180/400 (45%), Gaps = 45/400 (11%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R+G+I EA++ L M +G D T + ++ C ++ A +MI GF P+++
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
+ SL+ C++ S+ +A +L M G P+V ++ +I C
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 161 VDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
V + P+ TY+S++ C E +L+ A LF M G+ P+ TYT L+N C G
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
F +A+ L + M +GF+P+ I TYNA I LC R EA E+L GL
Sbjct: 409 FGRAYELMNLMGDEGFMPN--------IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 280 PDAVCYSTVIS-GLKIETEDKAIWWL-----------------------------DEDTY 309
D V Y+ +I K ++A+ + + +
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 310 DSLMDSLSY---EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
L+ SL ++TY+S+++ Y EG++ AL+ H+M R G + Y LI+GL K
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Query: 367 KARTREAKRDLLYIAS-DGFLSMPSYTVYDILLENCSNSE 405
K+ EA + LY A D LS P T + E C ++
Sbjct: 581 KSMVDEACK--LYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 184/456 (40%), Gaps = 67/456 (14%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ GR+ EA M+ M+ +GL T + V+ L I+ A + EM +G
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +Y +V R + +A L M +RG PD + +++ C
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+D G P+ ++SL++ LC + + +AF++ EM+R G P+ T+T L++ C
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G KAF L +++ + P + TY ++I G C D++ A + M E
Sbjct: 334 KRGWTEKAFRLFLKLVRSD-------TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
GL P+ Y+T+I+G + G+
Sbjct: 387 QGLFPNVNTYTTLING-------------------------------------HCKAGSF 409
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
RA +L + M +G++ + Y+ I+ L KK+R EA +LL A L T
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA-YELLNKAFSCGLEADGVTYTI 468
Query: 396 ILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
++ E C ++ + A M NKT E D + N+LI
Sbjct: 469 LIQEQCKQNDI----------------NQALAFFCRM----NKTGFE--ADMRLNNILIA 506
Query: 456 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
CR + ++ ++ +V G P + ++IS
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 19/293 (6%)
Query: 21 KSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKI 80
+SD+ V + C+E ++ AE + MK +GLF + TY+++I C
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 81 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 140
A+ L++ M +GF P++ TYN+ + + C++ +A +L GL D +Y +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 141 ISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 200
I + C G D + L+ A C ++++ E+ LF+ ++ G+
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 201 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 260
P + TYT +++ C G+ A M G +PD TY +LI GLC
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD--------SFTYGSLISGLCKK 581
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVI-----------SGLKIETEDKAIW 302
V+EA ++ M + GLSP V T+ + + +E DK +W
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW 634
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 46/367 (12%)
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
RL+EA + +M G++P +T +L +G A ++ DEM +G +PD
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD----- 216
Query: 244 SPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAI 301
+Y ++ G CF D +++EA L GM + G PD + +++ L + ++AI
Sbjct: 217 ---SSSYKLMVIG-CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 302 WWLDEDTYDSLMDSLSYEDT---YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
W+ + M L ++ ++S+++ +G++++A ++ +M R+G+ + ++
Sbjct: 273 WYFRK------MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 359 VLINGLHKKARTREAKRDLL-YIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYS 417
LI+GL K+ T +A R L + SD + P+ Y ++ Y
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTY--KPNVHTY---------------TSMIGGYC 369
Query: 418 MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 477
D + A ML + K G + Y LI HC++ + +AY + M G
Sbjct: 370 KEDKLNRAE-----MLFSRMKEQGLFP-NVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 478 HAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNL-SDSEQLKVLSEINVTKSEIYAL 536
P++++ A I +L E ++N SC L +D +L + +++I
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF-SCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 537 LDVLAEM 543
L M
Sbjct: 483 LAFFCRM 489
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR+ ++ E+E++ +++ GL + TY+S+I +C ID A M G P
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
TY SL+ C++ VD+A + AM +RGLSP + + ++C
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+DK ++ T +L+ LC E+++ A F+++L S D +T AC
Sbjct: 628 P-LDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 203/451 (45%), Gaps = 45/451 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EGR+ EA ++ M KGL +D TY +++ C + SA LLS+M P
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV Y++++ C+ A + M E+G++P+V +YN +I FC
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+++ I PD T+++L+ A E +L EA L EML + PD +TY ++ C
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
F A H+ D M SP +VT+N +I C RV+E +++LR + GL
Sbjct: 416 RFDDAKHMFDLMA------------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSS--VMNDYLAEGNM 335
+ Y+T+I G +++ + A +D + ++ DT + ++ + +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAA-----QDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY- 394
+ AL+L + VAY+++I+G+ K ++ E A D F S+P + V
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE--------AWDLFCSLPIHGVEP 570
Query: 395 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 454
D+ N S F +A + +L K K +G ++ D YN LI
Sbjct: 571 DVQTYNVMISGF---------------CGKSAISDANVLFHKMKDNG-HEPDNSTYNTLI 614
Query: 455 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 485
++ + K+ + EM G + F++
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 24/318 (7%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRL----CREGRIPEAE 49
+A NV YN MI GF + SD++ +++ + L +EG++ EAE
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ + M + +F D TY+S+I FC N+ D A + M SP VVT+N+++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
CR VD+ + +LR ++ RGL + +YN +I FC + G+ PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
T + L+ C ++L EA +LF + + D + Y +++ C + +A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL--- 559
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
F + G P + TYN +I G C + +A + M + G PD Y+T+I
Sbjct: 560 -----FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 290 SG-LKIETEDKAIWWLDE 306
G LK DK+I + E
Sbjct: 615 RGCLKAGEIDKSIELISE 632
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 209/503 (41%), Gaps = 89/503 (17%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R R A + M+ + + L+ +++ +I FC+ +K+ + + ++ GF P VV
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVV 177
Query: 101 TYNSLVFAYCRRDSVDKA---------------VGILRAMAERGLSPDVDSYNRVISKFC 145
T+N+L+ C D + +A V + M E GL+P V ++N +I+ C
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 146 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
V KG+ D TY +++ +C A +L +M + PD +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 206 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 265
Y+ +++ C G + A +L EM+ K G +P + TYN +I G C R +
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEK--------GIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 266 ALEILRGMPEMGLSPDAVCYSTVIS-----GLKIETED------KAIWWLDEDTYDSLM- 313
A +LR M E ++PD + ++ +IS G E E + D TY+S++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 314 ---------------DSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
D ++ D T++++++ Y + +QL ++SR G +++
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLEN-CSNSEFKSL 409
Y+ LI+G + D L A D F M P +ILL C N + +
Sbjct: 470 YNTLIHGF--------CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
+EL + M + D YN++I C+ V +A+++
Sbjct: 522 LELFEVIQMSKIDLDTVA----------------------YNIIIHGMCKGSKVDEAWDL 559
Query: 470 YMEMVHYGHAPHMFSVLALISAL 492
+ + +G P + + +IS
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGF 582
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 18/352 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ RLC++G +A+ + M KG+ + TY+ +I FC+ + A LL +MI +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P V+T+N+L+ A + + +A + M R + PD +YN +I FC
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFD 418
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
D PD T++++++ C +R+ E L RE+ R G+ + TY L++ C
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
V A L EMI G PD +T N L++G C +++EEALE+ +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPD--------TITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEG 333
+ D V Y+ +I G+ ++ W D + SL D TY+ +++ + +
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAW----DLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
+ A L H M +G+ Y+ LI G K ++ + + S+GF
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 182/451 (40%), Gaps = 83/451 (18%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ V N ++ + R + D A+ + R M R + ++ S+N +I FC
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAF---------------DLFREMLRGGVSP 202
G PD T+++L+ LC+E R+SEA LF +M+ G++P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 203 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 262
+T+ L+N CL G +A L ++M+ KG D +VTY +++G+C +
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID--------VVTYGTIVNGMCKMGD 276
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDED-----------TYDS 311
+ AL +L M E + PD V YS +I L + +L + TY+
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 312 LMDSL----SYED------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
++D + D T++++++ + EG + A +L +M
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSL 409
V Y+ +I G K R +AK +AS ++ T+ D+ C
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN--TIIDVY---CRAKRVDEG 451
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
++L+++ S R L + T YN LI C N++ A ++
Sbjct: 452 MQLLREISRRGLVANTTT----------------------YNTLIHGFCEVDNLNAAQDL 489
Query: 470 YMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
+ EM+ +G P + L+ ++ E
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 8 YNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGL 60
YN MI GF D++ S V + CR R+ E Q+L + +GL
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 61 FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS------ 114
+ TY+++I FC ++ +++A L EMI+ G P +T N L++ +C +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 115 -----------------------------VDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
VD+A + ++ G+ PDV +YN +IS FC
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 146 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
D G PD +TY++L+ + ++ +L EM G S D
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 206 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 250
T C V DE I + +L + G + +I Y
Sbjct: 644 TIKMAEEIICRVS---------DEEIIENYLRPKINGETSSIPRY 679
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 200/451 (44%), Gaps = 41/451 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC++G++ + L ++ KG++ D TY+++I + + ++ A L++ M KGFSP
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V TYN+++ C+ ++A + M GLSPD +Y ++ + C
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + PD +SS+M L +A F + G+ PD + YT L+ C G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A +L +EM+ +G D +VTYN ++HGLC + EA ++ M E L
Sbjct: 425 MISVAMNLRNEMLQQGCAMD--------VVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 279 SPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNM 335
PD+ + +I G K+ A+ + + + + D TY+++++ + G++
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAM-----ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
A ++ DM L + ++YS+L+N L K EA R V+D
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR-----------------VWD 574
Query: 396 ILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
++ ++K Y + D + M+ ++G D YN LI+
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI-----SEG-FVPDCISYNTLIY 628
Query: 456 EHCRSHNVHKAYNMY--MEMVHYGHAPHMFS 484
R N+ KA+ + ME G P +F+
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 186/446 (41%), Gaps = 39/446 (8%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G+ A+++ M GL D TY S++ C + + S+M ++ P
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+V ++S++ + R ++DKA+ ++ E GL PD Y +I +C
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ +G D TY++++ LC + L EA LF EM + PD T T L++ C +G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
A L +M K D +VTYN L+ G + ++ A EI M +
Sbjct: 495 NLQNAMELFQKMKEKRIRLD--------VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 279 SPDAVCYSTVISGLKIE---TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
P + YS +++ L + E +W DE ++ ++ +S++ Y GN
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVW--DEMISKNIKPTVM---ICNSMIKGYCRSGNA 601
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
M +G++ ++Y+ LI G ++ +A + + + +P Y+
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 396 ILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 454
+L C ++ K +++ R ++ D +T Y +I
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRST----------------------YTCMI 699
Query: 455 FEHCRSHNVHKAYNMYMEMVHYGHAP 480
N+ +A+ ++ EM+ G +P
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 176/373 (47%), Gaps = 17/373 (4%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
++ + +I + K+ AH + + +KGF+ S+ N+L+ + R V+ A G+
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ ++ G+ +V + N +++ C +KG++PD TY++L+ A +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ EAF+L M G SP TY ++N C G++ +A + EM+ +G
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR--------SG 335
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAI 301
SP TY +L+ C V E ++ M + PD VC+S+++S + DKA+
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 302 WWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
+ ++S+ ++ D Y+ ++ Y +G + A+ L ++M + G V Y+
Sbjct: 396 MY-----FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
+++GL K+ EA + L ++ L SYT+ ++ +C ++ +EL + +
Sbjct: 451 ILHGLCKRKMLGEADK-LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 420 DLSDDAATAHTTM 432
+ D T +T +
Sbjct: 510 RIRLDVVTYNTLL 522
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 168/422 (39%), Gaps = 64/422 (15%)
Query: 5 VNIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQML 52
V YN +I G GK + + E +S L C++G + E E++
Sbjct: 305 VYTYNTVINGLC-KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
M+ + + D +SS++ F +D A + + G P V Y L+ YCR+
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ A+ + M ++G + DV +YN ++ C ++ +FPD+ T
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 173 SSLMEALCVEQRLSEAFDLFR-----------------------------------EMLR 197
+ L++ C L A +LF+ +M+
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 198 GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGL 257
+ P ++Y+ L+NA C G +AF + DEMI K P ++ N++I G
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK--------NIKPTVMICNSMIKGY 595
Query: 258 CFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKA---IWWLDEDTYDSLM 313
C + L M G PD + Y+T+I G ++ E KA + ++E+ +
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 314 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
D TY+S+++ + + M+ A + M G Y+ +ING + EA
Sbjct: 656 DVF----TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 374 KR 375
R
Sbjct: 712 FR 713
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ G + A ++ + MK K + LD TY++++ F + ID+A + ++M++K P+
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
++Y+ LV A C + + +A + M + + P V N +I +C
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML--RGGVSPDELTYTRLLNACCLV 217
+ +G PD +Y++L+ E+ +S+AF L ++M +GG+ PD TY +L+ C
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
+ +A + +MI +G PD T Y +I+G D + EA I M + G
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRST--------YTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 278 LSPD 281
SPD
Sbjct: 723 FSPD 726
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 1 MALNVNIYNGMIRGFATAAGK-------SDSESKKVGEAFQS----LKRLCREGRIPEAE 49
+ L+V YN ++ GF +D SK++ S + LC +G + EA
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ + M K + +S+I +C + L +MI++GF P ++YN+L++ +
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 110 CRRDSVDKAVGILRAMAER--GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
R +++ KA G+++ M E GL PDV +YN ++ FC +++G+ P
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 204
D +TY+ ++ + L+EAF + EML+ G SPD+
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 175/418 (41%), Gaps = 41/418 (9%)
Query: 166 FPD----AATYSSLMEALCVEQRLSEAFD-LFREMLRGGVSPDELTYT--RLLNAC---- 214
FP+ + + S+++ L RLS+A L R + R GVS E+ + + C
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 215 ----CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
L+ + +A L + H+ F GF+ +I NALI L + VE A +
Sbjct: 166 SVFDLLIRTYVQARKLREA--HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 271 RGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMN 327
+ + G+ + + +++ L K +K +L + + + Y D TY+++++
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ-----VQEKGVYPDIVTYNTLIS 278
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
Y ++G M+ A +L + M G+ Y+ +INGL K + AK + G LS
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LS 337
Query: 388 MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT-- 445
S T +L+E C + ++ D RD+ D ++M+ L ++ +K
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV-CFSSMMSLFTRSGNLDKALM 396
Query: 446 ------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALD 493
D +Y +LI +CR + A N+ EM+ G A + + ++ L
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 494 DDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLD 551
+M E + N DS L +L + + + +++ +M + LD
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 204/467 (43%), Gaps = 49/467 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC G++ +A +++ M G +E TY V+ C + A LL +M +
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V Y+ ++ C+ S+D A + M +G D+ Y +I FC
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I PD +S+L++ E +L EA +L +EM++ G+SPD +TYT L++ C
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ KA H+ D M+ K G P I T+N LI+G C + +++ LE+ R M G+
Sbjct: 367 QLDKANHMLDLMVSK--------GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 279 SPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAE 332
D V Y+T+I G K+E ++ + ++ D +Y +++
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVA--------KELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G ++AL++ + + Y+++I+G+ ++ + A D F S+P
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD--------AWDLFCSLP--- 519
Query: 393 VYDILLENCSNSEFKSLVELVKDYSMR--DLSDDAATAHTTMLHLKNKTDGENKTDGGMY 450
K + VK Y++ L + + +L K + DG + +G Y
Sbjct: 520 -------------LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS-PNGCTY 565
Query: 451 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
N+LI H + K+ + E+ G + +V ++ L D R+
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 13/395 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
LK +C+ G+ A ++L M+ + + LD YS +I C +D+A L +EM KGF
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
++ Y +L+ +C D +LR M +R ++PDV +++ +I F
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ +GI PD TY+SL++ C E +L +A + M+ G P+ T+ L+N C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
L +M +G + D VTYN LI G C L ++E A E+ + M
Sbjct: 399 KANLIDDGLELFRKMSLRGVVAD--------TVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
+ PD V Y ++ GL E + + E S M+ L Y+ +++ +
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME-LDI-GIYNIIIHGMCNASKV 508
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
A L + G Y+++I GL KK EA DLL+ + P+ Y+
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA--DLLFRKMEEDGHSPNGCTYN 566
Query: 396 ILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH 429
IL+ + + +L+++ S DA+T
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 204/484 (42%), Gaps = 57/484 (11%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ KG+ + T S +I C K+ A + + ++I G+ P VT+++L+ C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
V +A+ ++ M E G P + + N +++ C V+ G P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
+++ +C + + A +L R+M + D + Y+ +++ C G AF+L +EM KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
F D I+ Y LI G C+ R ++ ++LR M + ++PD V +S +I
Sbjct: 278 FKAD--------IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 295 ETEDKAIWWL-----------DEDTYDSLMDSLSYED----------------------T 321
E + + L D TY SL+D E+ T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
++ ++N Y + L+L MS G ++ V Y+ LI G + + AK +
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 440
S P Y ILL+ C N E + +E+ + + D + + + N +
Sbjct: 450 SRRV--RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 441 GEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLA 487
++ K D YN++I C+ ++ +A ++ +M GH+P+ +
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 488 LISA 491
LI A
Sbjct: 568 LIRA 571
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 185/451 (41%), Gaps = 66/451 (14%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K D A L EM P ++ ++ L R D + + + M +G++ ++ + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I+ C + G PD T+S+L+ LC+E R+SEA +L M+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G P +T L+N CL G+ + A L D M+ TGF P VTY ++ +C
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE--------TGFQPNEVTYGPVLKVMC 223
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDE----------D 307
+ A+E+LR M E + DAV YS +I GL K + D A +E
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 308 TYDSLMDSLSYED----------------------TYSSVMNDYLAEGNMQRALQLDHDM 345
Y +L+ Y +S++++ ++ EG ++ A +L +M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 346 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNS 404
+ G V Y+ LI+G K+ + +A L + S G P+ ++IL+ C +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG--CGPNIRTFNILINGYCKAN 401
Query: 405 EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVH 464
+EL + S+R + D T YN LI C +
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVT----------------------YNTLIQGFCELGKLE 439
Query: 465 KAYNMYMEMVHYGHAPHMFSVLALISALDDD 495
A ++ EMV P + S L+ L D+
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 141/365 (38%), Gaps = 49/365 (13%)
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
+Y + + V+ + +A DLF+EM R P + ++RL + ++ L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 230 MIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDR 262
M KG + T G+ P VT++ LI+GLC R
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDT 321
V EALE++ M EMG P + + +++GL + + A+ +D + E T
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN---EVT 214
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
Y V+ G A++L M V YS++I+GL K A +
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM-------- 432
GF + +Y L+ C + +L++D R ++ D +
Sbjct: 275 IKGFKA--DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 433 ------LHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 486
LH + G + D Y LI C+ + + KA +M MV G P++ +
Sbjct: 333 LREAEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 487 ALISA 491
LI+
Sbjct: 392 ILING 396
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 203/489 (41%), Gaps = 73/489 (14%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+EG+I +AE++L KGL +E Y+++I +C + A + M +G
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P + YN L+ +C ++ A + M +G+SP V++YN +I +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
D G P+ +Y +L+ LC +L EA + R+M GVSP Y L++ CC
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ AF EM+ K G +VTYN LI GL ++ EA ++L +
Sbjct: 541 SKGKIEDAFRFSKEMLKK--------GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
GL PD Y+++ISG Y GN+
Sbjct: 593 KGLKPDVFTYNSLISG-------------------------------------YGFAGNV 615
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM-PSYTVY 394
QR + L +M R G + Y +LI+ K+ E L G +S+ P VY
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG--IELTERLF-----GEMSLKPDLLVY 668
Query: 395 DILLENC--SNSEFKSLVELVKDYSMRDLSDDAATAHTTML-HLK--------------N 437
+ +L +C + + + L K + + D T ++ +L LK N
Sbjct: 669 NGVL-HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN 727
Query: 438 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
+ E + D YN+++ HC + AY Y EM G + L+S L ++
Sbjct: 728 AREMEPEAD--TYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWR 785
Query: 498 YNEMSWVIN 506
E VI+
Sbjct: 786 SKEAEIVIS 794
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 175/409 (42%), Gaps = 44/409 (10%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK-----------RLCREGRIPEAEQML 52
N IYN MI G+ + K Q +K R C G + AE+ +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
MK KG+ TY+ +IG + + D +L EM G P+VV+Y +L+ C+
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ +A + R M +RG+SP V YN +I C + KGI + TY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L++ L + +LSEA DL E+ R G+ PD TY L++ G + L++EM
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 233 KGFLPDFVT-----------------------GFSPAIVTYNALIHGLCFLDRVEEALEI 269
G P T P ++ YN ++H +E+A +
Sbjct: 628 SGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 270 LRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYE---DTYSSV 325
+ M E + D Y+++I G LK+ + +DE M++ E DTY+ +
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE------MNAREMEPEADTYNII 741
Query: 326 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
+ + + A +M G+L + L++GL ++ R++EA+
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 215/500 (43%), Gaps = 49/500 (9%)
Query: 30 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 89
G+A Q+ +L G+ ++ MK ++ Y+ +I C +++ A L E
Sbjct: 183 GKAIQAAVKLSDVGK---GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
M+A+ PS++TYN+L+ YC+ + +K+ + M + P + ++N ++
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
D G PDA T+S L + ++ A ++ + GV + T +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
LLNA C G+ KA + + KG +P+ V YN +I G C + A
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNE--------VIYNTMIDGYCRKGDLVGARMK 411
Query: 270 LRGMPEMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSV 325
+ M + G+ PD + Y+ +I ++E +K + + L +TY+ +
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM------KLKGVSPSVETYNIL 465
Query: 326 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA---KRDLLYIAS 382
+ Y + + + +M +G + + V+Y LIN L K ++ EA KRD+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM----E 521
Query: 383 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--LHLKNK- 438
D +S P +Y++L++ CS + + K+ + + + T +T + L + K
Sbjct: 522 DRGVS-PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 439 TDGEN----------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 488
++ E+ K D YN LI + + NV + +Y EM G P + + L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 489 ISALDD------DRMYNEMS 502
IS +R++ EMS
Sbjct: 641 ISLCTKEGIELTERLFGEMS 660
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 205/475 (43%), Gaps = 43/475 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ R+ +AEQ+ + M + L TY+++I +C + + + M A PS
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
++T+N+L+ + V+ A +L+ M + G PD +++ + +
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF-REMLRGGVSPDELTYTRLLNACCLV 217
VD G+ +A T S L+ ALC E ++ +A ++ REM +G V P+E+ Y +++ C
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRK 402
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTY 250
G+ A + M +G PD + G SP++ TY
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYD 310
N LI G ++ +IL+ M + G P+ V Y T+I+ L ++ + D D
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
+ Y+ +++ ++G ++ A + +M + G + V Y+ LI+GL +
Sbjct: 523 RGVSPKVR--IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLENCS-NSEFKSLVELVKDYSMRDLSDDAATAH 429
EA+ LL I+ G P Y+ L+ + + L ++ + T H
Sbjct: 581 SEAEDLLLEISRKGL--KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 430 TTM-------LHLKNKTDGEN--KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 475
+ + L + GE K D +YN ++ + ++ KA+N+ +M+
Sbjct: 639 LLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 189/491 (38%), Gaps = 72/491 (14%)
Query: 31 EAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
E ++L+ L ++ RI A +L + L D ++S F SA +L S
Sbjct: 57 EKLRNLRVLLQQNRIETARGVLSSL----LRSDSTPFASPKELF-------SAFSLSSPS 105
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
+ FS Y L + +A + A+ G+ P DS ++
Sbjct: 106 LKHDFS-----YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQF 160
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
++ P Y ++A + + +LF M + P Y L
Sbjct: 161 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVL 220
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVT------GF--------------------- 243
++ C A L DEM+ + LP +T G+
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
P+++T+N L+ GL VE+A +L+ M ++G PDA +S + G + +A
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQ-LDHDMSRDGYLSSYVAYSVLIN 362
+ E DS + +Y T S ++N EG +++A + L +M++ G + + V Y+ +I+
Sbjct: 341 VYETAVDSGVKMNAY--TCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNTMID 397
Query: 363 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 421
G +K A+ + + G P + Y+ L+ C E ++ + V ++ +
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGM--KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 422 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 481
S T YN+LI + R + K +++ EM G P+
Sbjct: 456 SPSVET----------------------YNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 482 MFSVLALISAL 492
+ S LI+ L
Sbjct: 494 VVSYGTLINCL 504
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 149/336 (44%), Gaps = 54/336 (16%)
Query: 2 ALNVNIYNGMIRGFATAAGKSDSES-------KKVGEAFQSLKRL----CREGRIPEAEQ 50
LNV ++N ++ F SD++ + + S L C+ G + E +
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE--------------------- 89
+ M+ D TYS++I C NK+D AH L E
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 90 --------------MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 135
M++KG P +V YN+LV +C+ + A I+ M RGL PD
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
+Y +I FC GI D +S+L+ +C E R+ +A REM
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
LR G+ PD++TYT +++A C G+ F L EM G + P++VTYN L++
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV--------PSVVTYNVLLN 528
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
GLC L +++ A +L M +G+ PD + Y+T++ G
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 14/342 (4%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G L+ ++ ++ FC I A + E+ + P+VV++N+L+ YC+ ++D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ M + PDV +Y+ +I+ C +G+ P+ +++L+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
+ + +++ML G+ PD + Y L+N C G+ A ++ D MI +G PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETED 298
+TY LI G C VE ALEI + M + G+ D V +S ++ G+ ++
Sbjct: 415 --------KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM---CKE 463
Query: 299 KAIWWLDEDTYDSLMDSLSYED-TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 357
+ + + L + +D TY+ +M+ + +G+ Q +L +M DG++ S V Y
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 358 SVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
+VL+NGL K + + A D+L A +P Y+ LLE
Sbjct: 524 NVLLNGLCKLGQMKNA--DMLLDAMLNIGVVPDDITYNTLLE 563
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 154/336 (45%), Gaps = 12/336 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ + C+EG I +A+++ + + + L +++++I +C + +D L +M
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V TY++L+ A C+ + +D A G+ M +RGL P+ + +I
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ KG+ PD Y++L+ C L A ++ M+R G+ PD++TYT L++ C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ A + EM G D V GFS AL+ G+C RV +A LR M
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRV-GFS-------ALVCGMCKEGRVIDAERALREMLR 478
Query: 276 MGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
G+ PD V Y+ ++ K L E D + S+ TY+ ++N G
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV---TYNVLLNGLCKLGQ 535
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
M+ A L M G + + Y+ L+ G H+ A +
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 136/334 (40%), Gaps = 37/334 (11%)
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+D G + ++ LM C E +S+A +F E+ + + P +++ L+N C VG
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+ F L +M PD + TY+ALI+ LC ++++ A + M + GL P
Sbjct: 292 DEGFRLKHQMEKSRTRPD--------VFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 281 DAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRA 338
+ V ++T+I G + + I + E +Y ++ D Y++++N + G++ A
Sbjct: 344 NDVIFTTLIHG---HSRNGEIDLMKE-SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+ M R G + Y+ LI+G + A + +G I L
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG-----------IEL 448
Query: 399 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHC 458
+ S LV DA A ML K D Y +++ C
Sbjct: 449 DRVGFSA------LVCGMCKEGRVIDAERALREMLR------AGIKPDDVTYTMMMDAFC 496
Query: 459 RSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ + + + EM GH P + + L++ L
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 117/357 (32%), Gaps = 70/357 (19%)
Query: 191 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 250
+ E+L G + + L+N C G + A + DE+ + P +V++
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL--------QPTVVSF 278
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYD 310
N LI+G C + ++E + M + PD
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF--------------------------- 311
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
TYS+++N E M A L +M + G + + V ++ LI+G +
Sbjct: 312 ----------TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAH 429
K + S G P +Y+ L+ C N + + +V R L D T
Sbjct: 362 DLMKESYQKMLSKGL--QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT-- 417
Query: 430 TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 489
Y LI CR +V A + EM G AL+
Sbjct: 418 --------------------YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 490 SALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMD 546
+ + + + LR+ D ++ + K + +L EM D
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 206/484 (42%), Gaps = 57/484 (11%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ KG+ + T S +I FC K+ A + + ++I G+ P+ +T+++L+ C
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
V +A+ ++ M E G PD+ + N +++ C V+ G P+A TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
++ +C + + A +L R+M + D + Y+ +++ C G AF+L +EM K
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK- 292
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
G + I+TYN LI G C R ++ ++LR M + ++P+ V +S +I
Sbjct: 293 -------GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 295 ETEDKAIWWL-----------DEDTYDSLMDSLSYED----------------------T 321
E + + L D TY SL+D E+ T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
++ ++N Y + L+L MS G ++ V Y+ LI G + + AK +
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 440
S P+ Y ILL+ C N E + +E+ + + D + + + N +
Sbjct: 466 SRKV--PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 441 GEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLA 487
++ K YN++I C+ + +A ++ +M GHAP ++
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 488 LISA 491
LI A
Sbjct: 584 LIRA 587
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 203/462 (43%), Gaps = 39/462 (8%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC G+ EA +++ M G + TY V+ C + A LL +M +
Sbjct: 203 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V Y+ ++ C+ S+D A + M +G++ ++ +YN +I FC
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I P+ T+S L+++ E +L EA +L +EM+ G++PD +TYT L++ C
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
KA + D M+ K G P I T+N LI+G C +R+++ LE+ R M G+
Sbjct: 383 HLDKANQMVDLMVSK--------GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
D V Y+T+I G ++ + A E + ++ TY +++ G ++
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV---TYKILLDGLCDNGESEK 491
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
AL++ + + Y+++I+G+ ++ + A D F S+P
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD--------AWDLFCSLP-------- 535
Query: 398 LENCSNSEFKSLVELVKDYSMR--DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
K + VK Y++ L + +L K + DG + DG YN+LI
Sbjct: 536 --------LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG-HAPDGWTYNILIR 586
Query: 456 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
H + K+ + E+ G + ++ +I L D R+
Sbjct: 587 AHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 175/393 (44%), Gaps = 13/393 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L +C+ G+ A ++L M+ + + LD YS +I C +D+A L +EM KG
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+ +++TYN L+ +C D +LR M +R ++P+V +++ +I F
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ +GI PD TY+SL++ C E L +A + M+ G P+ T+ L+N C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
L +M +G + D VTYN LI G C L ++ A E+ + M
Sbjct: 415 KANRIDDGLELFRKMSLRGVVAD--------TVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
+ P+ V Y ++ GL E + + E S M+ L Y+ +++ +
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME-LDI-GIYNIIIHGMCNASKV 524
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
A L + G Y+++I GL KK EA+ + DG P Y+
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG--HAPDGWTYN 582
Query: 396 ILLE-NCSNSEFKSLVELVKDYSMRDLSDDAAT 427
IL+ + + + V+L+++ S DA+T
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 194/451 (43%), Gaps = 66/451 (14%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
K D A L +MI P+V+ ++ L A + D + + + M +G++ ++ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+I+ FC + G P+ T+S+L+ LC+E R+SEA +L M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G PD +T L+N CL G+ +A L D+M+ G P VTY +++ +C
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE--------YGCQPNAVTYGPVLNVMC 239
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDE----------D 307
+ A+E+LR M E + DAV YS +I GL K + D A +E
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 308 TYDSLMDSLS----YED------------------TYSSVMNDYLAEGNMQRALQLDHDM 345
TY+ L+ ++D T+S +++ ++ EG ++ A +L +M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 346 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNS 404
G + Y+ LI+G K+ +A + + + S G P+ ++IL+ C +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG--CDPNIRTFNILINGYCKAN 417
Query: 405 EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVH 464
+EL + S+R + D T YN LI C ++
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVT----------------------YNTLIQGFCELGKLN 455
Query: 465 KAYNMYMEMVHYGHAPHMFSVLALISALDDD 495
A ++ EMV P++ + L+ L D+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 146/352 (41%), Gaps = 58/352 (16%)
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
+Y + + V+ + +A DLFR+M+ P + ++RL +A ++ L +M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 231 IHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDRV 263
KG + T G+ P +T++ LI+GLC RV
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGLKIE-TEDKAIWWLDEDT-YDSLMDSLSYEDT 321
EALE++ M EMG PD + +T+++GL + E +A+ +D+ Y +++ T
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV----T 230
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
Y V+N G A++L M V YS++I+GL K A +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTD 440
G + + Y+IL+ C+ + +L++D R ++ + T
Sbjct: 291 MKGITT--NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT------------- 335
Query: 441 GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+++LI + + +A ++ EM+H G AP + +LI
Sbjct: 336 ---------FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 217/487 (44%), Gaps = 60/487 (12%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
LK LCR +A +L M+ L D +Y++VI FC +++ A L +EM G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
S S+VT+ L+ A+C+ +D+A+G L+ M GL D+ Y +I FC
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+++G P A TY++L+ C +L EA ++F M+ GV P+ TYT L++ C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVT-----------GF----------------SPAIV 248
VG+ +A L + MI K P+ VT G P +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMG--LSPDAVCYSTVISGLKIETE-DKAIWWLD 305
TYN L+ GLC ++EA ++L M + PD + Y+ +I GL E +A+
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL---- 444
Query: 306 EDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
D YD L++ L D T + ++N L G++ +A++L +S + + Y+ +I+G
Sbjct: 445 -DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 364 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD 423
K AK L + PS Y+ LL + L K+ S+ D
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSEL--QPSVFDYNCLLSS-----------LCKEGSL----D 546
Query: 424 DAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMF 483
A M N D +N++I ++ ++ A ++ + M G +P +F
Sbjct: 547 QAWRLFEEMQR------DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 484 SVLALIS 490
+ LI+
Sbjct: 601 TYSKLIN 607
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 212/506 (41%), Gaps = 32/506 (6%)
Query: 61 FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVG 120
F++ + S ++ + + K A +L+ M+ +GF+ +V +N L+ CR KAV
Sbjct: 104 FINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVS 163
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
+LR M L PDV SYN VI FC G T+ L++A C
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
++ EA +EM G+ D + YT L+ C GE + L DE++ +
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER------- 276
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDK 299
G SP +TYN LI G C L +++EA EI M E G+ P+ Y+ +I GL + +
Sbjct: 277 -GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 300 AIWWLDEDTYDSLM---DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
A+ L+ LM D TY+ ++N +G + A+++ M + +
Sbjct: 336 ALQLLN------LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVEL--- 412
Y++L+ GL K EA + L + D + P Y+ L+ C + +++
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 413 ----------VKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
V + + + A + M K +D + + Y +I C++
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKV 522
++ A + +M P +F L+S+L + ++ + R N D +
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 523 LSEINVTKSEIYALLDVLAEMAMDSL 548
+ + ++ +I + +L M+ L
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGL 595
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 190/450 (42%), Gaps = 32/450 (7%)
Query: 7 IYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEV 54
+Y +IRGF G+ D E + ++ C+ G++ EA ++ E
Sbjct: 249 VYTSLIRGFCDC-GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEF 307
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M +G+ + TY+ +I C + K A LL+ MI K P+ VTYN ++ C+
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF--PDAATY 172
V AV I+ M +R PD +YN ++ C + + PD +Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L+ LC E RL +A D++ ++ + D +T LLN+ G+ KA L ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+ + T Y A+I G C + A +L M L P Y+ ++S L
Sbjct: 488 SKIVRNSDT--------YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 293 KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
E W L ++ + ++ D +++ +++ L G+++ A L MSR G
Sbjct: 540 CKEGSLDQAWRL----FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENC-SNSEFKSL 409
YS LIN K EA + GF P + D +L+ C S E L
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF--EPDAHICDSVLKYCISQGETDKL 653
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKT 439
ELVK +D+ D T M ++ N +
Sbjct: 654 TELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 43/327 (13%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQM 51
NV Y G+I G GK+ + + + + +LC++G + +A ++
Sbjct: 316 NVYTYTGLIDGLC-GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG--FSPSVVTYNSLVFAY 109
+E+MK + D TY+ ++G C +D A LL M+ P V++YN+L+
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
C+ + + +A+ I + E+ + D + N +++ D I ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
TY+++++ C L+ A L +M + P Y LL++ C G +A+ L +E
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 230 MIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCFLDR 262
M PD V+ G SP + TY+ LI+ L
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 263 VEEALEILRGMPEMGLSPDA-VCYSTV 288
++EA+ M + G PDA +C S +
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 14/205 (6%)
Query: 4 NVNIYNGMIRGFATAA----GKSDSESKKVGEAFQS-------LKRLCREGRIPEAEQML 52
N + Y MI GF K +V E S L LC+EG + +A ++
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M+ F D +++ +I I SA +LL M G SP + TY+ L+ + +
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+D+A+ M + G PD + V+ VDK I D
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELT 672
Query: 173 SSLMEALCVEQRLSEAFDLFREMLR 197
++M+ +C S DL + +LR
Sbjct: 673 CTVMDYMCNS---SANMDLAKRLLR 694
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 194/424 (45%), Gaps = 43/424 (10%)
Query: 44 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
+ EA +++ M +G D TY +V+ C ID A LL++M A +VV +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
+++ + C+ V+ AV + M +G+ P+V +YN +I+ C ++K
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
I P+ T+++L++A E +L EA L EM++ + PD +TY L+N C+ +A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ M+ K LP+ I TYN LI+G C RVE+ +E+ R M + GL + V
Sbjct: 383 KQMFKFMVSKDCLPN--------IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 284 CYSTVISGLKIETEDKAIWWL-----------DEDTYDSLMDSL-SYEDTYSS-VMNDYL 330
Y+T+I G + + + D TY L+ L SY ++ V+ YL
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 331 AEGNMQRAL----QLDHDMSRDGYLSS-------------YVAYSVLINGLHKKARTREA 373
+ M+ + + M + G + V Y+ +I+GL K +EA
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 374 KRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSMRDLSDDAATAH--T 430
+ DG ++P+ Y+ L+ N + + + EL+K+ DA+T T
Sbjct: 555 DDLFRKMKEDG--TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVT 612
Query: 431 TMLH 434
MLH
Sbjct: 613 NMLH 616
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 162/340 (47%), Gaps = 24/340 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + A + M+ KG+ + TY+S+I CN + A LLS M+ K +P+
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVT+N+L+ A+ + + +A + M +R + PD +YN +I+ FC
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V K P+ TY++L+ C +R+ + +LFREM + G+ + +TYT ++ G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A + +M+ D I+TY+ L+HGLC +++ AL I + + + +
Sbjct: 448 DCDSAQMVFKQMVSNRVPTD--------IMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNM 335
+ Y+T+I G+ + W L SLS + TY+++++ ++ +
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAW--------DLFCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 375
Q A L M DG L + Y+ LI +A R+ R
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDR 586
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 220/531 (41%), Gaps = 48/531 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR ++ A +L M G D T SS++ +C+ +I A L+ +M+ G+ P
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
T+ +L+ + +AV ++ M +RG PD+ +Y V++ C
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
I + +++++++LC + + A DLF EM G+ P+ +TY L+N C G
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
++ A L M+ K +P +VT+NALI ++ EA ++ M + +
Sbjct: 308 RWSDASRLLSNMLEK--------KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDED----TYDSLMDSLSYEDTYSSVMNDYLAEGN 334
PD + Y+ +I+G + LDE + D L TY++++N +
Sbjct: 360 DPDTITYNLLINGFCMHNR------LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS-YTV 393
++ ++L +MS+ G + + V Y+ +I G + A+ + S+ +P+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN---RVPTDIMT 470
Query: 394 YDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 452
Y ILL CS Y D T ++ K E + + +YN
Sbjct: 471 YSILLHGLCS-------------YGKLD---------TALVIFKYLQKSEMELNIFIYNT 508
Query: 453 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSC 512
+I C++ V +A++++ + P + + +IS L R+ E +
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 513 NLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLDGGKCSYAPASRH 563
L +S L N+ + A +++ EM + D S H
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 186/414 (44%), Gaps = 55/414 (13%)
Query: 64 ERTYSSVIGWF--------CNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
ER+++S G + ++ K+D A L +M+ PS+V +N L+ A + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
+ + + M G+S D+ +Y+ I+ FC + G PD T SSL
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ C +R+S+A L +M+ G PD T+T L++ L + ++A L D+M+ +G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 236 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK-- 293
PD +VTY +++GLC ++ AL +L M + + V ++T+I L
Sbjct: 220 QPD--------LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 294 ----------IETEDKAIWWLDEDTYDSLMDSL----SYED------------------T 321
E E K I + TY+SL++ L + D T
Sbjct: 272 RHVEVAVDLFTEMETKGIRP-NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
++++++ + EG + A +L +M + + Y++LING R EAK+ ++
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 382 SDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 434
S L P+ Y+ L+ C + VEL ++ S R L + T +TT++
Sbjct: 391 SKDCL--PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT-YTTIIQ 441
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 165/419 (39%), Gaps = 85/419 (20%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS---------------------PDEL 205
P ++ +L + C E+ + A +RE+LR +S P +
Sbjct: 25 PTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIV 84
Query: 206 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT------------------------ 241
+ +LL+A + +F L ++M G D T
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 242 ---GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE- 297
G+ P IVT ++L++G C R+ +A+ ++ M EMG PD ++T+I GL + +
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 298 DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 357
+A+ +D+ L TY +V+N G++ AL L + M ++ V +
Sbjct: 205 SEAVALVDQMVQRGCQPDLV---TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 358 SVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDY 416
+ +I+ L K A + + G P+ Y+ L+ C+ + L+ +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGI--RPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 417 SMRDLSDDAATAHTTM--------------LH---LKNKTDGENKTDGGMYNLLIFEHCR 459
+ ++ + T + + LH ++ D + T YNLLI C
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT----YNLLINGFCM 375
Query: 460 SHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYNEMSW--VINNTL 509
+ + +A M+ MV P++ + LI+ D ++ EMS ++ NT+
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 21/384 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K LC G I +A + + M +G + TY+ +I C KI+ A+ + +M+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PSV+TYN+L+ YC+ V A +L M +R P+V ++N ++ C
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+D G+ PD +Y+ L++ LC E ++ A+ L M + PD LT+T ++NA C
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ A M+ KG D VTG LI G+C + + +AL IL + +
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTG--------TTLIDGVCKVGKTRDALFILETLVK 539
Query: 276 MGL--SPDA--VCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 331
M + +P + V + G K++ E + L + L+ S+ TY+++++ +
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEE---LAMLGKINKLGLVPSVV---TYTTLVDGLIR 593
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
G++ + ++ M G L + Y+++INGL + R EA++ LL D +S P++
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK-LLSAMQDSGVS-PNH 651
Query: 392 TVYDILLEN-CSNSEFKSLVELVK 414
Y ++++ +N + +E V+
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVR 675
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 184/434 (42%), Gaps = 51/434 (11%)
Query: 6 NIYNGMIR-GFATAAGKSDSESKKVGEAFQS------LKRLCREGRIPEAEQMLEVM-KC 57
I N + + G+ AA S+ K+G S L CR + +A ++ +VM K
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 58 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 117
+ +YS +I C + +++ A L +M KG PS TY L+ A C R +DK
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 118 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
A + M RG P+V +Y +I C V IFP TY++L+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
C + R+ AF+L M + P+ T+ L+ C VG+ KA HL M+ G P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 238 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIET 296
D IV+YN LI GLC + A ++L M + PD + ++ +I+ K
Sbjct: 440 D--------IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 297 EDKAIWW----------LDEDTYDSLMDSLSYEDTYS---------------------SV 325
D A + LDE T +L+D + +V
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 326 MNDYLAEG-NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 384
+ D L++G ++ L + +++ G + S V Y+ L++GL + + R L + G
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG 611
Query: 385 FLSMPSYTVYDILL 398
L P+ Y I++
Sbjct: 612 CL--PNVYPYTIII 623
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 168/374 (44%), Gaps = 21/374 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFC---NLNKIDSAHTLLSEMIAKGF 95
LC+ G AE + + G LD +S++ FC NL ++S+ +
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT--C 262
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P+ V+Y+ L+ C +++A G+ M E+G P +Y +I C
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ +G P+ TY+ L++ LC + ++ EA + R+M++ + P +TY L+N C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G AF L M + P+ T +N L+ GLC + + +A+ +L+ M +
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRT--------FNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWL--DEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
GLSPD V Y+ +I GL E + L + +D D L T+++++N + +G
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL----TFTAIINAFCKQG 490
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY-- 391
A M R G V + LI+G+ K +TR+A L + L+ P
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 392 TVYDILLENCSNSE 405
+ D+L + C E
Sbjct: 551 VILDMLSKGCKVKE 564
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 173/441 (39%), Gaps = 74/441 (16%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCREG + A ++L M C + D T++++I FC K D A L M+ KG S
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 99 VVTYNSLVFAYCR----RDS-------------------------------VDKAVGILR 123
VT +L+ C+ RD+ V + + +L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+ + GL P V +Y ++ G P+ Y+ ++ LC
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF-LPDFVTG 242
R+ EA L M GVSP+ +TYT ++ G+ +A M+ +G+ L D +
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI-- 688
Query: 243 FSPAIVTYNALIHGLCF----LDRVEEAL---------------EILRGMPEMGLSPDAV 283
Y++L+ G +D EE+ E++ + ++G +
Sbjct: 689 -------YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGL 741
Query: 284 CYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 343
C V K D++ ++ + L + E +M Y ++ + ++L
Sbjct: 742 CIFLVTRLCKEGRTDES----NDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELIT 797
Query: 344 DMSRDGYLSSYVAYSVLINGLHKKA---RTREAKRDLLYIASDGFLSMPSYTVY-DILLE 399
+ + G++ S+ ++ ++I GL K+ R RE +LL S+G + Y + L+E
Sbjct: 798 LVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL--TSNGVVEKSGVLTYVECLME 855
Query: 400 NCSNSEFKSLVELVKDYSMRD 420
+ +++LV R+
Sbjct: 856 GDETGDCSEVIDLVDQLHCRE 876
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 36/323 (11%)
Query: 172 YSSLMEALCVEQRLSEAFDLF-REMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
Y +++ ALC + +EA ++F ++L+ G D T LL F + +L D +
Sbjct: 198 YRTIVNALC-KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG------FCRGLNLRDAL 250
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
+ VT +P V+Y+ LIHGLC + R+EEA + M E G P Y+ +I
Sbjct: 251 KVFDVMSKEVT-CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 291 GL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
L DKA DE ++ TY+ +++ +G ++ A + M +D
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCKPNVH---TYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSL 409
S + Y+ LING K R +P++ + ++ + ++
Sbjct: 367 IFPSVITYNALINGYCKDGRV-----------------VPAFELLTVMEKRACKPNVRTF 409
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
EL++ + + LK D D YN+LI CR +++ AY +
Sbjct: 410 NELMEGLC------RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 470 YMEMVHYGHAPHMFSVLALISAL 492
M + P + A+I+A
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAF 486
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 201/479 (41%), Gaps = 93/479 (19%)
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
L++M G+ D T + ++ FC ++ A + L +M+ GF P +VT+ SL+ +C
Sbjct: 98 LQIM---GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+ +++A+ ++ M E G+ PDV Y +I C + GI PD
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
Y+SL+ LC R +A L R M + + PD +T+ L++A G+F A L++EMI
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+P I TY +LI+G C V+EA ++ M G PD V Y+++I+G
Sbjct: 275 R--------MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 292 L-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
K + D A+++ ++MS+ G
Sbjct: 327 FCKCKKVDD--------------------------------------AMKIFYEMSQKGL 348
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSL 409
+ + Y+ LI G + + A+ ++ S G P+ Y++LL C N + K
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV--PPNIRTYNVLLHCLCYNGKVKKA 406
Query: 410 VELVKDYSMRDLSDDAAT--AHTTMLHLKNKTDGENKTDGGMYN------LLIFEH---- 457
+ + +D R++ A + +LH G YN L++FE
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLH------------GLCYNGKLEKALMVFEDMRKR 454
Query: 458 ----------------CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
C++ V A N++ + G P++ + +IS L + + +E
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 169/341 (49%), Gaps = 19/341 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ + A L M G D T++S+I FC N+++ A +++++M+ G P
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV Y +++ + C+ V+ A+ + M G+ PDV Y +++ C
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ I PD T+++L++A E + +A +L+ EM+R ++P+ TYT L+N C+ G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A + M KG PD +V Y +LI+G C +V++A++I M + GL
Sbjct: 297 CVDEARQMFYLMETKGCFPD--------VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 279 SPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNM 335
+ + + Y+T+I G ++ + A ++ + ++ + TY+ +++ G +
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVA-----QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 336 QRALQLDHDMSR---DGYLSSYVAYSVLINGLHKKARTREA 373
++AL + DM + DG + Y+VL++GL + +A
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 13/349 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G + A + + M+ G+ D Y+S++ CN + A +LL M + P
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+T+N+L+ A+ + A + M ++P++ +Y +I+ FC
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
KG FPD Y+SL+ C +++ +A +F EM + G++ + +TYT L+ VG
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM-- 276
+ A + M+ +G P+ I TYN L+H LC+ +V++AL I M +
Sbjct: 367 KPNVAQEVFSHMVSRGVPPN--------IRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 277 -GLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
G++P+ Y+ ++ GL + + + ED MD TY+ ++ G +
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI--ITYTIIIQGMCKAGKV 476
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 384
+ A+ L + G + V Y+ +I+GL ++ EA + DG
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C EG + EA QM +M+ KG F D Y+S+I FC K+D A + EM KG + +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+TY +L+ + + + A + M RG+ P++ +YN ++ C
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 159 XXVDK---GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ P+ TY+ L+ LC +L +A +F +M + + +TYT ++ C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ A +L + KG P+ +VTY +I GL EA + R M E
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPN--------VVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Query: 276 MGLS 279
G+S
Sbjct: 524 DGVS 527
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 158/387 (40%), Gaps = 81/387 (20%)
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-- 241
+ +EA DLF M+ P + +T+LLN + +F +L D + G D T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 242 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
GF P IVT+ +LI+G C +R+EEA+ ++ M EM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWLDE----------DTYDSLMDSLS----YED- 320
G+ PD V Y+T+I L K + A+ D+ Y SL++ L + D
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 321 -----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
T++++++ ++ EG A +L ++M R + Y+ LING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 364 LHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLS 422
+ EA++ + + G P Y L+ C + +++ + S + L+
Sbjct: 292 FCMEGCVDEARQMFYLMETKG--CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 423 DDAATAHTTMLHLKNKTDGEN--------------KTDGGMYNLLIFEHCRSHNVHKAYN 468
+ T +TT++ + N + YN+L+ C + V KA
Sbjct: 350 GNTIT-YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 469 MYMEMVHY---GHAPHMFSVLALISAL 492
++ +M G AP++++ L+ L
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGL 435
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 34/405 (8%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G++ +A ++L +M+ G+ + ++ I F N+++ A L M G P+VV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TYN ++ YC V++A+ +L M +G PD SY ++ C
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 161 V-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ G+ PD TY++L+ L EA ++ G D+L Y+ +++A C G
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
++A L +EM+ KG P P +VTY A+++G C L V++A ++L+ M G
Sbjct: 434 MSEAKDLINEMLSKGHCP-------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Query: 280 PDAVCYSTVISGL-----KIETED-----KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 329
P+ V Y+ +++G+ +E + + WW + +S+ TYS +M+
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW----SPNSI--------TYSVIMHGL 534
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF-LSM 388
EG + A + +M G+ V ++L+ L + RT EA++ + + G +++
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 389 PSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 433
++T ++ C N E + + ++ D + + D T +TT++
Sbjct: 595 VNFTT--VIHGFCQNDELDAALSVLDDMYLINKHADVFT-YTTLV 636
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 153/394 (38%), Gaps = 60/394 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
LC+EGR+ EA+ ++ M KG D TY++V+ FC L ++D A LL M G P
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ V+Y +L+ CR +A ++ E SP+ +Y+ ++
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS---------------- 201
V KG FP + L+++LC + R EA E L G +
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 607
Query: 202 -------------------PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
D TYT L++ G +A L +M+HK G
Sbjct: 608 DELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK--------G 659
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETED 298
P VTY +IH C + +V++ + IL M + Y+ VI L K+E D
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEEAD 717
Query: 299 KAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
+ ++ + S D T ++M YL +G A ++ M +
Sbjct: 718 TLL--------GKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKM 769
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 390
L L K + EA + +L + G +S S
Sbjct: 770 CEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 11/249 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ LCR+GR EA + +E KG ++ +++VI FC +++D+A ++L +M
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
V TY +LV ++ + +A +++ M +G+ P +Y VI ++C
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVA 685
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ + Y+ ++E LCV +L EA L ++LR D T L+
Sbjct: 686 ILEKMISRQKC--RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G A+ + M ++ +PD + L L +V+EA +++ + E
Sbjct: 744 KKGVPLSAYKVACRMFNRNLIPD--------VKMCEKLSKRLVLKGKVDEADKLMLRLVE 795
Query: 276 MG-LSPDAV 283
G +SP ++
Sbjct: 796 RGHISPQSL 804
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 184/428 (42%), Gaps = 47/428 (10%)
Query: 6 NIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPE------------------ 47
I+N ++ + T+ S A++ LK++ + G +P
Sbjct: 373 KIFNSLVHAYCTSGDHS--------YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 48 -------AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
AE+ M G+ L++ SS C+ K + A +++ EMI +GF P
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ ++ C ++ A + M GL DV +Y ++ FC
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ G P+ TY++L+ A +++S A +LF ML G P+ +TY+ L++ C G+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFS--------PAIVTYNALIHGLCFLDRVEEALEILRG 272
KA + + M +PD F P +VTY AL+ G C RVEEA ++L
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 273 MPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 331
M G P+ + Y +I GL K+ D+A E + +L TYSS+++ Y
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY---TYSSLIDRYFK 721
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
A ++ M + + V Y+ +I+GL K +T EA + + + G P+
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNV 779
Query: 392 TVYDILLE 399
Y +++
Sbjct: 780 VTYTAMID 787
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 201/511 (39%), Gaps = 90/511 (17%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC ++ A + E MK GL D TY+ ++ FC I+ A +EM G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P+VVTY +L+ AY + V A + M G P++ +Y+ +I C
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 156 XXXXXV----------------DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG 199
D P+ TY +L++ C R+ EA L M G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 200 VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT------------------ 241
P+++ Y L++ C VG+ +A + EM GF T
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 242 ---------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+P +V Y +I GLC + + +EA ++++ M E G P+ V Y+ +I G
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 293 ----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
KIET + L+ + + TY +++ G + A L +M +
Sbjct: 790 GMIGKIET---CLELLERMGSKGVAPNYV---TYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL-------SMPSYTVYDILLENC 401
+ + Y +I G +K+ +I S G L + P +VY +L++N
Sbjct: 844 HWPTHTAGYRKVIEGFNKE-----------FIESLGLLDEIGQDDTAPFLSVYRLLIDN- 891
Query: 402 SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSH 461
L++ + L ++ AT T++ + YN LI C ++
Sbjct: 892 -------LIKAQRLEMALRLLEEVATFSATLVDYSST-----------YNSLIESLCLAN 933
Query: 462 NVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
V A+ ++ EM G P M S +LI L
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 30/383 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC G+ +A ++ M +G D TYS V+ + CN +K++ A L EM G
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V TY +V ++C+ +++A M E G +P+V +Y +I +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPD--------------- 203
+ +G P+ TYS+L++ C ++ +A +F M PD
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 204 -ELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 262
+TY LL+ C +A L D M + G P + Y+ALI GLC + +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMS--------MEGCEPNQIVYDALIDGLCKVGK 689
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDT 321
++EA E+ M E G YS++I K++ +D A L + +S ++
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV---I 746
Query: 322 YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
Y+ +++ G A +L M G + V Y+ +I+G + L +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 382 SDGFLSMPSYTVYDILLENCSNS 404
S G P+Y Y +L+++C +
Sbjct: 807 SKGV--APNYVTYRVLIDHCCKN 827
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 158/343 (46%), Gaps = 20/343 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L C+ R+ EA ++L+ M +G ++ Y ++I C + K+D A + +EM GF
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
++ TY+SL+ Y + D A +L M E +P+V Y +I C
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+KG P+ TY+++++ + ++ +L M GV+P+ +TY L++ CC
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G A +L +EM + P G+ I +N +E +E L + E
Sbjct: 826 KNGALDVAHNLLEEM-KQTHWPTHTAGYRKVIEGFN------------KEFIESLGLLDE 872
Query: 276 MG---LSPDAVCYSTVISGL-KIETEDKAIWWLDE-DTYDSLMDSLSYEDTYSSVMNDYL 330
+G +P Y +I L K + + A+ L+E T+ + + + Y TY+S++
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL--VDYSSTYNSLIESLC 930
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
++ A QL +M++ G + ++ LI GL + ++ EA
Sbjct: 931 LANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 196/501 (39%), Gaps = 70/501 (13%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EA L M+ + TYS+++ N ++ +L+ M+ +G PS
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX------ 152
+NSLV AYC A +L+ M + G P YN +I C
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
+ G+ + SS LC + +AF + REM+ G PD TY+++LN
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSP 245
C + AF L +EM G + D T G +P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWL 304
+VTY ALIH +V A E+ M G P+ V YS +I G K +KA
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 305 D-----EDTYDSLMDSLSYED--------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
+ +D D M Y+D TY ++++ + ++ A +L MS +G
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 352 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVE 411
+ + Y LI+GL K + EA+ ++ GF P+ T+Y + SL++
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF---PA-TLY----------TYSSLID 717
Query: 412 LVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYM 471
+DL A+ + ML + + +Y +I C+ +AY +
Sbjct: 718 RYFKVKRQDL---ASKVLSKML------ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Query: 472 EMVHYGHAPHMFSVLALISAL 492
M G P++ + A+I
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGF 789
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/506 (20%), Positives = 192/506 (37%), Gaps = 50/506 (9%)
Query: 23 DSESKKVGEAFQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 81
D + + GE L ++ CR G A + L +K TY+ +I F +++D
Sbjct: 193 DDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLD 252
Query: 82 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
SA + EM T ++ C+ V K L + PD Y ++I
Sbjct: 253 SASLIHREMSLANLRMDGFTLRCFAYSLCK---VGKWREALTLVETENFVPDTVFYTKLI 309
Query: 142 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS 201
S C P+ TYS+L+ +++L + M+ G
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
Query: 202 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-------------------- 241
P + L++A C G+ + A+ L +M+ G +P +V
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 242 -------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV 288
G + ++ LC + E+A ++R M G PD YS V
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 289 ISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
++ L ++ + + L E+ + + Y TY+ +++ + G +++A + ++M
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVY--TYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFK 407
G + V Y+ LI+ K + A + S+G L P+ Y L++ +C + +
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL--PNIVTYSALIDGHCKAGQVE 605
Query: 408 SLVELVKDY-SMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKA 466
++ + +D+ D ++ K D + + Y L+ C+SH V +A
Sbjct: 606 KACQIFERMCGSKDVPD-------VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 467 YNMYMEMVHYGHAPHMFSVLALISAL 492
+ M G P+ ALI L
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 167/420 (39%), Gaps = 39/420 (9%)
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
G+ + YN+LV R D L+ + + + N ++ K C
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
D P +TY+ L++A RL A + REM + D T +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C VG++ +A L + + F+PD V Y LI GLC EEA++ L M
Sbjct: 280 LCKVGKWREALTLVET---ENFVPD--------TVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 274 PEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLA 331
P+ V YST++ G +K + + +M Y ++S+++ Y
Sbjct: 329 RATSCLPNVVTYSTLLCG----CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
G+ A +L M + G++ YV Y++LI + + DLL +A + M +
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC--DLLDLAEKAYSEMLAA 442
Query: 392 TVY--DILLEN-----CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG--- 441
V I + + CS +++ ++++ + D +T + +L N +
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 442 ----ENKTDGGM------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
E GG+ Y +++ C++ + +A + EM G P++ + ALI A
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G+ EA +++++M+ KG + TY+++I F + KI++ LL M +KG +P+
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VTY L+ C+ ++D A +L M + Y +VI F
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Query: 159 XXVDKGIFPD-----------------------------------AATYSSLMEALCVEQ 183
D F ++TY+SL+E+LC+
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++ AF LF EM + GV P+ ++ L+ + ++A L D + H
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 202/461 (43%), Gaps = 38/461 (8%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L L E RI + MK G + TY+ ++ C NK+D A LL EM KG
Sbjct: 153 LDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGC 212
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V+Y +++ + C V + R +AER P V YN +I+ C
Sbjct: 213 CPDAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFE 267
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V+KGI P+ +YS+L+ LC ++ AF +ML+ G P+ T + L+ C
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
L G A L ++MI +GF G P +V YN L+ G C + +A+ + M E
Sbjct: 328 LRGTTFDALDLWNQMI-RGF------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 276 MGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAE 332
+G SP+ Y ++I+G K + D A++ ++ ++ S + Y++++
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVY-----IWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
+ A L MS++ S ++ I GL R A++ + P+
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP-PNIV 494
Query: 393 VYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTM------------LHLKNK- 438
Y+ LL+ + + + L ++ MR + ++T +T + L L K
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Query: 439 -TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 478
DG++ + M N++I +C+ +A M +++V G
Sbjct: 555 MVDGKSPDEITM-NMIILAYCKQGKAERAAQM-LDLVSCGR 593
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 206/488 (42%), Gaps = 55/488 (11%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
LK LC+ ++ A+++L M KG D +Y++VI C + + L A+ F
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERF 242
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V YN+L+ C+ A ++R M E+G+SP+V SY+ +I+ C
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNAC 214
+ +G P+ T SSL++ + +A DL+ +M+RG G+ P+ + Y L+
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C G KA + M G SP I TY +LI+G ++ A+ I M
Sbjct: 363 CSHGNIVKAVSVFSHMEE--------IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED------TYSSVMND 328
G P+ V Y+ ++ L ++ K +SL++ +S E+ T+++ +
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEA--------ESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 329 YLAEGNMQRALQLDHDMSRDGYL-SSYVAYSVLINGLHKKARTREA---KRDLLYIASDG 384
G + A ++ M + + V Y+ L++GL K R EA R++ +
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 385 FLSMPSYTVYDILLENCSNSEFKSL-VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 443
S + Y+ LL N+ + ++LV + S D T + +L + E
Sbjct: 527 -----SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 444 ---------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM--FSVL 486
+ D Y +I+ CRS+ + M+ G P + +SVL
Sbjct: 582 AAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Query: 487 ALISALDD 494
LDD
Sbjct: 642 INCFILDD 649
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDER-TYSSVIGWFCNLNKIDSAHTLLSEMIAKG 94
+KRL +E +P A + + LF T+ +I ++DS LL +M +G
Sbjct: 47 VKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG 106
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
F S + S++ Y + ++AV + + E G P V YN V+
Sbjct: 107 FHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY 166
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
G P+ TY+ L++ALC ++ A L EM G PD ++YT ++++
Sbjct: 167 MVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C VG + L + F P + YNALI+GLC + A E++R M
Sbjct: 227 CEVGLVKEGRELAER-------------FEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 275 EMGLSPDAVCYSTVISGL----KIETE------------DKAIWWLDE------------ 306
E G+SP+ + YST+I+ L +IE I+ L
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 307 ---DTYDSLMDSLSYEDT---YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 360
D ++ ++ + Y++++ + + GN+ +A+ + M G + Y L
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 361 INGLHKKARTREAKRDLLYIASDGFLS--MPSYTVYDILLEN-CSNSEFKSLVELVKDYS 417
ING K+ A +YI + S P+ VY ++E C +S+FK L++ S
Sbjct: 394 INGFAKRGSLDGA----VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 418 MRDLSDDAAT 427
+ + T
Sbjct: 450 KENCAPSVPT 459
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 161/363 (44%), Gaps = 18/363 (4%)
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD-SVDKAVGIL 122
++ Y +V+ N+++ A M G P+V + N L+ A CR D +VD + I
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M +RG PD +Y +IS C V+K P TY+SL+ LC
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ + EA EM G+ P+ TY+ L++ C G +A L + M+ +G P+
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN---- 296
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAI 301
+VTY LI GLC +++EA+E+L M GL PDA Y VISG I +A
Sbjct: 297 ----MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 302 WWLDEDTYDSLMDSLSYEDTYSSVMNDY---LAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
+LDE + + + + N+ L RA L M G
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLE 412
Query: 359 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 418
L+ L KK ++A + + I +DG +PS + +L+ + + K++V D +
Sbjct: 413 SLVKCLCKKGEFQKAVQLVDEIVTDG--CIPSKGTWKLLIGHTLD---KTIVGEASDTLL 467
Query: 419 RDL 421
RDL
Sbjct: 468 RDL 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC + EA + LE MK KG+ + TYSS++ C + A L M+A+G P+
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+VTY +L+ C+ + +AV +L M +GL PD Y +VIS FC
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 159 XXVDKGIFPDAATY-------SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 211
+ GI P+ T+ + ++ LC S AF L+ M G+S + T L+
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLV 415
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLP 237
C GEF KA L DE++ G +P
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 157/400 (39%), Gaps = 87/400 (21%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV-GEFTKAFH 225
P Y +++ L E +L+ AF ++ M G+ P + L+ A C G
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ EM +G PD T Y LI GLC R++EA ++ M E +P V Y
Sbjct: 179 IFLEMPKRGCDPDSYT--------YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 286 STVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQL 341
+++I+GL + D+A+ +L+E M S E TYSS+M+ +G +A++L
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEE------MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENC 401
M G + V Y+ LI GL K+ + +EA
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEA---------------------------- 316
Query: 402 SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSH 461
VEL+ +++ L K D G+Y +I C
Sbjct: 317 --------VELLDRMNLQGL----------------------KPDAGLYGKVISGFCAIS 346
Query: 462 NVHKAYNMYMEMVHYGHAP-------HMFSVLALISALDDDRMYNEMSWVINNTLRSCNL 514
+A N EM+ G P H+ + ++ L + Y ++ + ++RS +
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN--YPSRAFTLYLSMRSRGI 404
Query: 515 S-DSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLLLDGG 553
S + E L+ L + K E + ++ E+ D + G
Sbjct: 405 SVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 228/529 (43%), Gaps = 78/529 (14%)
Query: 5 VNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLC-REGRIPEAEQMLEVMKCKGLFLD 63
+++ +G+IR + D F SL R C + G A +++E + +G +
Sbjct: 131 LHVLSGLIRSYQACGSSPD--------VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVS 182
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
++ +G N+N+ID + EM + G+ +V T+N +++++C+ + +A+ +
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 124 AMAERGLSPDVDSYNRVISKFCXXX-XXXXXXXXXXXXVDKGIF--PDAATYSSLMEALC 180
M + G+ P+V S+N +I C + G F P+A TY+S++ C
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD-- 238
RL A + +M++ GV +E TY L++A G +A L DEM KG + +
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362
Query: 239 ---------FVTG---------------------FSPAIVTYNALIHGLCFLDRVEEALE 268
F+ G F+ AIV + GLC V+EA+E
Sbjct: 363 IYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIV-----VRGLCRNGYVKEAVE 417
Query: 269 ILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED-TYSSVMN 327
R + E L D VC++T++ DK + D+ L+ LS + ++ ++++
Sbjct: 418 FQRQISEKKLVEDIVCHNTLMHHF---VRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
YL EG ++RAL++ M + S+ V Y+ ++NGL K+ A+ A +
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE------AVVNAME 528
Query: 388 MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 447
+ Y+ LL E +K ++ + D +L K DGE
Sbjct: 529 IKDIVTYNTLLN-----------ESLKTGNVEEADD--------ILSKMQKQDGEKSVSL 569
Query: 448 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 496
+N++I C+ + KA + MV G P + LI++ R
Sbjct: 570 VTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R+ ++ A+Q+L M +GL LD ++ ++I + K++ A + MI + ++V
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX--XXXXX 158
YNS+V +R A ++ AM + D+ +YN ++++
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
D T++ ++ LC +A ++ + M+ GV PD +TY L+ +
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 219 EFTKAFHLHDEMIHKGFLP 237
K LHD +I +G P
Sbjct: 619 SQEKVVELHDYLILQGVTP 637
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+C + A L M G D T++S++ +C+ N+I+ A L +++ GF P+
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY +L+ C+ ++ AV + M G P+V +YN +++ C
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + I P+ T+++L++A +L EA +L+ M++ V PD TY L+N C+ G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A + M G P+ V Y LIHG C RVE+ ++I M + G+
Sbjct: 308 LLDEARQMFYLMERNGCYPN--------EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQ 336
+ + Y+ +I G + + ++ ++ + + D TY+ +++ G ++
Sbjct: 360 VANTITYTVLIQGYCLVGRPD----VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
+AL + M + + V Y+++I G+ K + +A
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 152/355 (42%), Gaps = 12/355 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C RI +A + + + G + TY+++I C ++ A L ++M G P+V
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTYN+LV C A +LR M +R + P+V ++ +I F
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ ++PD TY SL+ LC+ L EA +F M R G P+E+ YT L++ C
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ EM KG + + +TY LI G C + R + A E+ M
Sbjct: 344 VEDGMKIFYEMSQKGVVAN--------TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 280 PDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 339
PD Y+ ++ GL + + + E MD TY+ ++ G ++ A
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV--TYTIIIQGMCKLGKVEDAF 453
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
L + G + + Y+ +I+G ++ EA + DGFL P+ +VY
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL--PNESVY 506
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 172/411 (41%), Gaps = 70/411 (17%)
Query: 83 AHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
A L +M+ GF P +VT+ SL+ YC + ++ A+ + + G P+V +Y +I
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 143 KFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 202
C G P+ TY++L+ LC R +A L R+M++ + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 203 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 262
+ +T+T L++A VG+ +A L++ MI PD + TY +LI+GLC
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD--------VFTYGSLINGLCMYGL 308
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 322
++EA ++ M G P+ V Y+T+I G
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHG------------------------------- 337
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 382
+ ++ +++ ++MS+ G +++ + Y+VLI G R A+ ++S
Sbjct: 338 ------FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 383 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 441
+ P Y++LL+ C N + + + + + R++ + T
Sbjct: 392 RR--APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT-------------- 435
Query: 442 ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
Y ++I C+ V A++++ + G P++ + +IS
Sbjct: 436 --------YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC G++ +A + E M+ + + ++ TY+ +I C L K++ A L + +KG
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
P+V+TY +++ +CRR + +A + + M E G P+ Y
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 162/372 (43%), Gaps = 80/372 (21%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GW------------------------ 73
LCR+ ++ EAE+M E+MK G+ + TYS++I G+
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 74 ----------FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
FC ++ +A +L M+ G P++ YN L+ +C+ ++ +AVG+L
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
M LSPDV +Y +I+ C ++ IFP +ATY+SL+ C E
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
+ +A DL EM GV P+ +T++ L++ C V + A L+ EM KG +PD
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD----- 478
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
+VTY ALI ++EAL + M E G+ P+ ++ ++ G +W
Sbjct: 479 ---VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG----------FW 525
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
++ SV D+ E N QR+ ++V ++ LI G
Sbjct: 526 ---------------KEGRLSVAIDFYQENNQQRSCW------------NHVGFTCLIEG 558
Query: 364 LHKKARTREAKR 375
L + A R
Sbjct: 559 LCQNGYILRASR 570
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 157/330 (47%), Gaps = 12/330 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
++G + E++L+ M G+ + Y+ I C NK++ A + M G P++
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY++++ YC+ +V +A G+ + + L P+V + ++ FC
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V G+ P+ Y+ L+ C + EA L EM +SPD TYT L+N C+ +
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+A L +M ++ P+ TYN+LIHG C +E+AL++ M G+ P
Sbjct: 391 AEANRLFQKMKNERIF--------PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 281 DAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRAL 339
+ + +ST+I G + A+ E T ++ + TY+++++ + E NM+ AL
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV---TYTALIDAHFKEANMKEAL 499
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
+L DM G + ++ L++G K+ R
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 138/321 (42%), Gaps = 13/321 (4%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G EA + MKC D + S++ + DS MI++G P V Y
Sbjct: 146 GLFEEALWVSREMKCSP---DSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
L ++ K +L M G+ P+V Y I C
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK 262
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G+ P+ TYS++++ C + +A+ L++E+L + P+ + + L++ C E
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A L M+ G P + YN LIHG C + EA+ +L M + LSPD
Sbjct: 323 ARSLFVHMVK--------FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 283 VCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
Y+ +I+GL IE + L + + + TY+S+++ Y E NM++AL L
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERI--FPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 343 HDMSRDGYLSSYVAYSVLING 363
+M+ G + + +S LI+G
Sbjct: 433 SEMTASGVEPNIITFSTLIDG 453
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 8/243 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC E ++ EA ++ + MK + +F TY+S+I +C ++ A L SEM A G P+
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
++T+++L+ YC + A+G+ M +G+ PDV +Y +I
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
++ GI P+ T++ L++ E RLS A D ++E + + + +T L+ C G
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A +M G PD I +Y +++ G R+ + + + M + G+
Sbjct: 564 YILRASRFFSDMRSCGITPD--------ICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 279 SPD 281
P+
Sbjct: 616 LPN 618
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 130/353 (36%), Gaps = 54/353 (15%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
PD+ S++ L +R + ++ M+ G+ PD Y L C G ++K L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 227 HDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCF 259
DEM G P+ G P + TY+A+I G C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 260 LDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE 319
V +A + + + L P+ V + T++ G E L +D Y
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY- 340
Query: 320 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
Y+ +++ + GNM A+ L +M Y++LINGL + + EA R
Sbjct: 341 -VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNK 438
+ ++ PS Y+ L+ C + ++L + + + + T
Sbjct: 400 MKNERIF--PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT----------- 446
Query: 439 TDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
++ LI +C ++ A +Y EM G P + + ALI A
Sbjct: 447 -----------FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 221/520 (42%), Gaps = 61/520 (11%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCK-G 59
++LNV +N ++ G+ C EG++ +A MLE M +
Sbjct: 200 VSLNVQTFNVLVNGY------------------------CLEGKLEDALGMLERMVSEFK 235
Query: 60 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 119
+ D TY++++ ++ LL +M G P+ VTYN+LV+ YC+ S+ +A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
I+ M + + PD+ +YN +I+ C + PD TY++L++
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG- 354
Query: 180 CVEQRLS-EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
C E LS EA L +M GV +++T+ L C + E++
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD------ 408
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETED 298
+ GFSP IVTY+ LI + + ALE++R M + G+ + + +T++ L E +
Sbjct: 409 -MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK- 466
Query: 299 KAIWWLDEDTYDSLMDS------LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 352
LDE +L++S + E TY +++ + E +++AL++ +M +
Sbjct: 467 -----LDE--AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 353 SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVEL 412
+ ++ LI GL +T A +A G L S T I+L C + E
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS-TFNSIILGYCKEGRVEKAFEF 578
Query: 413 VKDYSMRDLSDDAATAHTTM------------LHLKNKTDGENKTDGGMYNLLIFEHCRS 460
+ D T + + L+ N E + D YN +I C+
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKD 638
Query: 461 HNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
+ +AY++ EM G P F+ + IS L +D +E
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 35/346 (10%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K + G + A +M+ M KG+ ++ T ++++ C K+D AH LL+ +GF
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
VTY +L+ + R + V+KA+ + M + ++P V ++N +I C
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ PD +T++S++ C E R+ +AF+ + E ++ PD T LLN C
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G KA + + +I + + VTYN +I C +++EA ++L M E
Sbjct: 603 KEGMTEKALNFFNTLIEEREV---------DTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
GL PD Y++ IS L ED + DE L+ S + G+M
Sbjct: 654 KGLEPDRFTYNSFISLL---MEDGKLSETDE-----LLKKFSGKF------------GSM 693
Query: 336 QRALQLDHDM------SRDGYLSSYVAYSVLINGLHKKARTREAKR 375
+R LQ++ + S++ + +AYS +I+ L + R +E R
Sbjct: 694 KRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 198/465 (42%), Gaps = 90/465 (19%)
Query: 80 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 139
I SA + +M+ G S +V T+N LV YC ++ A+G+L R
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE---------------R 229
Query: 140 VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG 199
++S+F + PD TY+++++A+ + RLS+ +L +M + G
Sbjct: 230 MVSEF-------------------KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNG 270
Query: 200 VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCF 259
+ P+ +TY L+ C +G +AF + + M LPD + TYN LI+GLC
Sbjct: 271 LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD--------LCTYNILINGLCN 322
Query: 260 LDRVEEALEILRGMPEMGLSPDAVCYSTVIS-----GLKIE------------------T 296
+ E LE++ M + L PD V Y+T+I GL +E T
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382
Query: 297 EDKAIWWLDED--------TYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDM 345
+ ++ WL ++ L+D + TY +++ YL G++ AL++ +M
Sbjct: 383 HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 346 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 405
+ G + + + +++ L K+ + EA L GF+ + T +++ +
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI-VDEVTYGTLIMGFFREEK 501
Query: 406 FKSLVELVKDYSMRDLSDDAATAHTTM----LHLKNKTDGEN---------KTDGGMYNL 452
+ +E+ + ++ +T ++ + H K + E D +N
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 453 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
+I +C+ V KA+ Y E + + P ++ L++ L + M
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 143/327 (43%), Gaps = 47/327 (14%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR+G + A + + + KGL TY ++I C + ++ +A L++EM +KG + +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
V +N+L+ YCR+ VD+A I M ++G DV + N + S F
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
++ G+ +Y++L++ C E + EA LF EM GV P+ +TY ++ A C G+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+A L M G PD T Y +LIHG C D V+EA+ + M GL
Sbjct: 520 IKEARKLRANMEANGMDPDSYT--------YTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 280 PDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
++V Y+ +ISGL K D+A DE
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDE-------------------------------- 599
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLH 365
M R GY Y+ LI +H
Sbjct: 600 ------MKRKGYTIDNKVYTALIGSMH 620
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 189/437 (43%), Gaps = 34/437 (7%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G E ++ + M KGL +DER+ + +ID + M+ G +V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
+V CRR V+K+ +++ + +G+ P+ +YN +I+ +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G+ + TY+ LME ++S+A LF EM G+ D YT L++ C G +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 223 AFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIH 255
AF L DE+ KG P T G + V +N LI
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMD 314
G C V+EA I M + G D +T+ S +++ D+A WL +
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 315 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
S +Y+++++ Y EGN++ A +L +MS G + + Y+V+I K+ + +EA+
Sbjct: 468 STV---SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 375 RDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH 434
+ + ++G + SYT ++ C + L + ++ L ++ T +T M+
Sbjct: 525 KLRANMEANG-MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT-YTVMIS 582
Query: 435 LKNKTDGENKTDGGMYN 451
+K G++ G+Y+
Sbjct: 583 GLSKA-GKSDEAFGLYD 598
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 155/362 (42%), Gaps = 29/362 (8%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCR G + +++++++ KG+ + TY+++I + +L M G +
Sbjct: 234 LCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYN 293
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VTY L+ + + A + M ERG+ DV Y +IS C
Sbjct: 294 KVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+KG+ P + TY +L++ +C + A L EM GV+ ++ + L++ C G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVTYN 251
+A ++D M KGF D T G + V+Y
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT 473
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDS 311
LI C VEEA + M G+ P+A+ Y+ +I + + K L + +
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 312 LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 371
MD SY TY+S+++ N+ A++L +M G + V Y+V+I+GL K ++
Sbjct: 534 GMDPDSY--TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 372 EA 373
EA
Sbjct: 592 EA 593
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 141/352 (40%), Gaps = 40/352 (11%)
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V KG+ D + + A +R+ ++FR M+ GV + T ++ C GE
Sbjct: 181 VKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEV 240
Query: 221 TKAFHLHDEMIHKGFLPDF-VTGFSPAIVTYNALIHGLCF---LDRVEEALEILRGMPEM 276
K+ K + +F V G P TYN +I+ VE L++++
Sbjct: 241 EKS---------KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK----- 286
Query: 277 GLSPDAVCYSTVISGLKIETEDKAIWWLD-EDTYDSLMDSLSYED--TYSSVMNDYLAEG 333
D V Y+ V L +E K D E +D + + D Y+S+++ +G
Sbjct: 287 ---KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
NM+RA L +++ G S Y LI+G+ K A+ + + S G + V
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV--NITQVV 401
Query: 394 YDILLENCSNSEFKSLVELVKDY-SMRDLSDDAATAHTT---MLHLKNKTDGEN----KT 445
++ L++ ++ D + D T +T LK + +
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 446 DGGM------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
+GG+ Y LI +C+ NV +A +++EM G P+ + +I A
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 192/434 (44%), Gaps = 47/434 (10%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K +C EG++ +++E KG + Y+++IG +C L I++A+ + E+ KGF
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P++ T+ +++ +C+ + +L + ERGL V N +I
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ PD ATY+ L+ LC E + A E + G+ P+ L+Y L+ A C
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
E+ A L +M +G PD IVTY LIHGL +++A+ + + +
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPD--------IVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 276 MGLSPDAVCYSTVISGL---------KI---ETEDKAIWWLDEDTYDSLMD--------- 314
G+SPDA Y+ ++SGL K+ E D+ I D Y +L+D
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL-PDAYVYATLIDGFIRSGDFD 502
Query: 315 ------SLSYEDT-------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
SLS E +++++ + G + AL + M+ + + YS +I
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 362 NGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRD 420
+G K+ A + Y+ + P+ Y L+ C +FK E K+ +RD
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNK--CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 421 LSDDAATAHTTMLH 434
L + T +TT++
Sbjct: 621 LVPNVVT-YTTLIR 633
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 227/535 (42%), Gaps = 70/535 (13%)
Query: 4 NVNIYNGMIRGFATAAGKSDS-----ESKKVG-----EAFQSL-KRLCREGRIPEAEQML 52
N+ YN +I G+ ++ E K G E F ++ C+EG ++++L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 53 EVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
+K +GL + +++I + + K+D A ++ +IA P V TYN L+ C+
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCK 357
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+ AVG L +++GL P+ SY +I +C ++G PD T
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
Y L+ L V + +A ++ +++ GVSPD Y L++ C G F A L EM+
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 232 HKGFLPD------FVTGFSPA---------------------IVTYNALIHGLCFLDRVE 264
+ LPD + GF + +V +NA+I G C ++
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 265 EALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYED 320
EAL + M E L PD YST+I G + T K +++++ +
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNV------V 591
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 380
TY+S++N + +G+ + A + +M + + V Y+ LI L K++ T E + + Y
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE--KAVYYW 649
Query: 381 ASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAH------TTMLH 434
L M + V + + NC F VK S + L++ + H + H
Sbjct: 650 E----LMMTNKCVPNEVTFNCLLQGF------VKKTSGKVLAEPDGSNHGQSSLFSEFFH 699
Query: 435 LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 489
+ K+DG + YN + C V A +MV G +P S A++
Sbjct: 700 -RMKSDGWS-DHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 132/349 (37%), Gaps = 44/349 (12%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ GR A+ + M + + D Y+++I F D A + S + KG
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV +N+++ +CR +D+A+ + M E L PD +Y+ +I +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL------- 211
P+ TY+SL+ C + A + F+EM + P+ +TYT L+
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 212 ---------------NAC--------CLVGEFTK------------AFHLHDEMIHKGFL 236
N C CL+ F K + H + + F
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFH 699
Query: 237 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIET 296
G+S YN+ + LC V+ A M + G SPD V ++ ++ G +
Sbjct: 700 RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Query: 297 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 345
K W + D + L YS V+ +L + + A + H M
Sbjct: 760 NSKQ--WRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAM 806
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 148/394 (37%), Gaps = 44/394 (11%)
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLS-PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
++ AY S+ KAV I + E S PDV + N ++S D+
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G D + L++ +C E ++ L G P+ + Y ++ C +G+ A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ + E+ KGF+P + T+ +I+G C + +L + E GL
Sbjct: 260 YLVFKELKLKGFMP--------TLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVW 311
Query: 284 CYSTVIS-----GLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
+ +I G K++ + W + D + TY+ ++N EG + A
Sbjct: 312 FLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA-------TYNILINRLCKEGKKEVA 364
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+ + S+ G + + ++Y+ LI K A + LL +A G P Y IL+
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG--CKPDIVTYGILI 422
Query: 399 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHC 458
LV M DDA ++ D D +YN+L+ C
Sbjct: 423 HG-----------LVVSGHM----DDAVNMKVKLI------DRGVSPDAAIYNMLMSGLC 461
Query: 459 RSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
++ A ++ EM+ P + LI
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 43/249 (17%)
Query: 44 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
R E ++ L+ M GL +Y++VI C +I++A L+EM +G SP++VT+N
Sbjct: 405 RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
+ + Y R V K G+L + G PDV
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV----------------------------- 495
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
T+S ++ LC + + +AFD F+EML G+ P+E+TY L+ +CC G+ ++
Sbjct: 496 ------ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
L +M G PD + YNA I C + +V++A E+L+ M +GL PD
Sbjct: 550 VKLFAKMKENGLSPD--------LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 284 CYSTVISGL 292
YST+I L
Sbjct: 602 TYSTLIKAL 610
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 197/542 (36%), Gaps = 136/542 (25%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G+ R Y++VI N +D A+ +M + G P TYN L+ C++ VD+A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ +++ M + G P+V +Y +I F + + P+ AT + +
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 179 L--CVE------------------QRL---------------SEAFDLFREMLRGGVSPD 203
+ C+ QR+ E R++ G PD
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 204 ELTYTRLLNACCLVG-EFTKAFHLHDEMIHKGFLPDF----------------------- 239
T+ + +C L G + + + D + +G P F
Sbjct: 355 SSTFNAAM-SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 240 ----VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE 295
V G ++ +YNA+I LC R+E A L M + G+SP+ V ++T +SG
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG---- 469
Query: 296 TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 355
Y G++++ + + G+ +
Sbjct: 470 ---------------------------------YSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 356 AYSVLINGLHKKARTREAKRDLLYIASDGFLSM------PSYTVYDILLENCSNSEFKSL 409
+S++IN L R +E K A D F M P+ Y+IL+ +C ++
Sbjct: 497 TFSLIINCL---CRAKEIKD-----AFDCFKEMLEWGIEPNEITYNILIRSCCST----- 543
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
T + L K K +G + D YN I C+ V KA +
Sbjct: 544 ---------------GDTDRSVKLFAKMKENGLS-PDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 470 YMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVT 529
M+ G P F+ LI AL + +E + ++ R + DS +++ E+++
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLR 647
Query: 530 KS 531
KS
Sbjct: 648 KS 649
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 173/396 (43%), Gaps = 39/396 (9%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K LC++GRI EA M + +G+ TYSS+I FC + S L +MI G+
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P VV Y LV ++ + A+ M + + +V +N +I +C
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
GI PD AT++++M +E RL EA LF M + G+ PD L Y L++A C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 216 LVGEFTKAFHLHDEM---------------IH-----------KGFLPDFVTG-FSPAIV 248
+ T L D M IH F + + G P IV
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDED 307
TYN +I G C L R++EA I + P+ V + +I L K D AI
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF--- 694
Query: 308 TYDSLM---DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
S+M S TY +M+ + +++ + +L +M G S V+YS++I+GL
Sbjct: 695 ---SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 365 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 400
K+ R EA ++ + A D L +P Y IL+
Sbjct: 752 CKRGRVDEAT-NIFHQAIDAKL-LPDVVAYAILIRG 785
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/579 (21%), Positives = 239/579 (41%), Gaps = 109/579 (18%)
Query: 38 RLCREGRIPEAEQ----MLEVMKCKG---------LFLDERTYSSVIGWFCN-------L 77
+LCR G P +L+ + CKG + ER + I CN +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI-VSCNKVLKGLSV 264
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
++I+ A LLS ++ G +P+VVT+ +L+ +C+R +D+A + + M +RG+ PD+ +Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 138 NRVISKFCXXXXXXXXXXXXXXXVDK---------------------------------- 163
+ +I + + K
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 164 -GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
GI P+ TY+ L++ LC + R+ EAF ++ ++L+ G+ P +TY+ L++ C G
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 223 AFHLHDEMIHKGFLPD------FVTGFSPA---------------------IVTYNALIH 255
F L+++MI G+ PD V G S +V +N+LI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV--ISGLKIETEDKAIWWLDEDTYDSLM 313
G C L+R +EAL++ R M G+ PD ++TV +S ++ E+ +
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 314 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
D+L+ Y ++++ + LQL M R+ + +V+I+ L K R +A
Sbjct: 565 DALA----YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 374 KRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSD--DAATAHTT 431
+ +G + P Y+ ++ C + L E + + + ++ T
Sbjct: 621 SK-FFNNLIEGKME-PDIVTYNTMI--CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 432 MLHL---KNKTDGE-----------NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYG 477
++H+ N DG +K + Y L+ +S ++ ++ ++ EM G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 478 HAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSD 516
+P + S +I L +E + + + + + L D
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 8/243 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ + Q+ ++M+ + D + VI ++I+ A + +I P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+VTYN+++ YC +D+A I + P+ + +I C
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+KG P+A TY LM+ + +F LF EM G+SP ++Y+ +++ C G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A ++ + I LPD +V Y LI G C + R+ EA + M G+
Sbjct: 756 RVDEATNIFHQAIDAKLLPD--------VVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 279 SPD 281
PD
Sbjct: 808 KPD 810
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C R+ EAE++ E++K + T + +I C N +D A + S M KG P+
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTY L+ + + ++ + + M E+G+SP + SY+ +I C
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
+D + PD Y+ L+ C RL EA L+ MLR GV PD+L
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 167/429 (38%), Gaps = 86/429 (20%)
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
CR VDKA+ I + G+ + P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGV----------------------------------VIPQD 182
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT-YTRLLNACCLVGEFTKAFHLHD 228
+ Y ++ +L R+ D F ++ RGG+ P ++ + +L+A GE TKA H
Sbjct: 183 SVY-RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR 241
Query: 229 EMIHKGFLPDFVT--------------------------GFSPAIVTYNALIHGLCFLDR 262
++ +GF V+ G +P +VT+ LI+G C
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED-- 320
++ A ++ + M + G+ PD + YST+I G + + + + D
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGY----FKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 380
+SS ++ Y+ G++ A + M G + V Y++LI GL + R EA I
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 381 ASDGFLSMPSYTVYDILLE---NCSN--SEFKSLVELVK-----DYSMRDLSDDAATAHT 430
G PS Y L++ C N S F +++K D + + D +
Sbjct: 418 LKRGM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 431 TMLH---LKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM--FS 484
MLH K G++ + + ++N LI CR + +A ++ M YG P + F+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 485 VLALISALD 493
+ +S ++
Sbjct: 536 TVMRVSIME 544
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 8/254 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + G E ++ MK +G LD R Y+ VI FC K++ A+ LL EM KGF P+
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY S++ + D +D+A + + + +V Y+ +I F
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ KG+ P+ T++SL++AL + ++EA F+ M +P+++TY L+N C V
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+F KAF EM + G P+ ++Y +I GL + EA + G
Sbjct: 742 KFNKAFVFWQEMQKQ--------GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 279 SPDAVCYSTVISGL 292
PD+ CY+ +I GL
Sbjct: 794 VPDSACYNAMIEGL 807
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 192/465 (41%), Gaps = 43/465 (9%)
Query: 33 FQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
F +L R +EGR+ A +L+ MK L D Y+ I F + K+D A E+
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
A G P VTY S++ C+ + +D+AV + + + P +YN +I +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 211
KG P Y+ ++ L ++ EA +F EM + +P+ TY L+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
+ C G+ AF L D M G P+ + T N ++ LC +++EA +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPN--------VRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 272 GMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMND 328
M +PD + + ++I GL K+ D A Y+ ++DS ++ Y+S++ +
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAY-----KVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
+ G + ++ DM + ++ + K + + I + F+
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-- 549
Query: 389 PSYTVYDILLENCSNSEFKS-LVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 447
P Y IL+ + F + EL YSM++ +L D
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELF--YSMKE--------QGCVL------------DT 587
Query: 448 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
YN++I C+ V+KAY + EM G P + + ++I L
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 164/399 (41%), Gaps = 43/399 (10%)
Query: 38 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
RLC+ ++ EA M E M K DE T+ S+I + ++D A+ + +M+
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ + Y SL+ + + I + M + SPD+ N +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ PDA +YS L+ L +E ++LF M G D Y +++ C
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G+ KA+ L +EM K GF P +VTY ++I GL +DR++EA +
Sbjct: 601 GKVNKAYQLLEEMKTK--------GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 278 LSPDAVCYSTVISGL-KIETEDKAIWWLDE----------DTYDSLMDSLSYED------ 320
+ + V YS++I G K+ D+A L+E T++SL+D+L +
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 321 ----------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
TY ++N +A +M + G S ++Y+ +I+GL
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 365 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 403
K EA ++G +P Y+ ++E SN
Sbjct: 773 AKAGNIAEAGALFDRFKANG--GVPDSACYNAMIEGLSN 809
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 62/264 (23%)
Query: 3 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREG------------------- 43
L+ YN +I GF KV +A+Q L+ + +G
Sbjct: 585 LDTRAYNIVIDGFCKCG--------KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 44 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
R+ EA + E K K + L+ YSS+I F + +ID A+ +L E++ KG +P++ T+N
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 104 SLVFAYCRRDSVDKAV------------------GIL-----------------RAMAER 128
SL+ A + + +++A+ GIL + M ++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Query: 129 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 188
G+ P SY +IS G PD+A Y++++E L R +A
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Query: 189 FDLFREMLRGGVSPDELTYTRLLN 212
F LF E R G+ T LL+
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLD 840
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 135/350 (38%), Gaps = 43/350 (12%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G P T ++ +L E +D+ + M + P YT L+ A V
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN----- 182
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
H +M+ F G+ P + + LI G RV+ AL +L M L D V
Sbjct: 183 ---HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 284 CYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
Y+ I K+ D A + E + L E TY+S++ + A+++
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD---EVTYTSMIGVLCKANRLDEAVEMF 296
Query: 343 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS 402
+ ++ + AY+ +I G + EA L + G S+PS Y+ +L C
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG--SIPSVIAYNCIL-TCL 353
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
K + E +K + ++ DAA +T YN+LI CR+
Sbjct: 354 RKMGK-VDEALKVFE--EMKKDAAPNLST------------------YNILIDMLCRAGK 392
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR-------MYNEMSWVI 505
+ A+ + M G P++ +V ++ L + M+ EM + +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 178/398 (44%), Gaps = 65/398 (16%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ GR+ EA ++L + + G L R YSS+I + A L + M+ K P
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
++ Y L+ + ++ A+ +L +M +G+SPD YN VI C
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ FPDA T++ L+ ++C + EA ++F E+ + G SP T+ L++ C G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457
Query: 219 EFTKA-FHLH----------------------DEMIHKGF-------LPDFV-TGFSPAI 247
E +A LH D M+ G L F TG SP I
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKA--IWWL 304
V+YN LI+G C ++ AL++L + GLSPD+V Y+T+I+GL ++ E++A +++
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA 577
Query: 305 DED------TYDSLMD--------------SLSY-------EDTYSSVMNDYLAEGNMQR 337
+D Y SLM + Y +D ++ + EG +R
Sbjct: 578 KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETER 637
Query: 338 ALQ--LDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
AL+ ++ D +D + Y++ + GL + R EA
Sbjct: 638 ALRRLIELDTRKDEL--TLGPYTIWLIGLCQSGRFHEA 673
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 191/466 (40%), Gaps = 79/466 (16%)
Query: 83 AHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
A + +EM+ SP++ T+ L+ ++ A + M RG+SP+ +Y +IS
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 143 KFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 202
C G +PD+ +++L++ C R+ EAF+L R + G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 203 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 262
Y+ L++ +T+AF L+ M+ K PD I+ Y LI GL +
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD--------IILYTILIQGLSKAGK 353
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGL--KIETEDKAIWWLDEDTYDSLMDSLSYED 320
+E+AL++L MP G+SPD CY+ VI L + E+ L+ +S D+
Sbjct: 354 IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC---- 409
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK------ 374
T++ ++ G ++ A ++ ++ + G S ++ LI+GL K +EA+
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 375 ---------------------------------RDLLYIASDGFLSMPSYTVYDILLEN- 400
RDL + A G S P Y++L+
Sbjct: 470 EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTG--SSPDIVSYNVLINGF 527
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM--LHLKNKTDGENKT---------DGGM 449
C + ++L+ ++ LS D+ T +T + LH + + K +
Sbjct: 528 CRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587
Query: 450 YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD 495
Y L+ CR V A+N++M+ L IS LDD+
Sbjct: 588 YRSLMTWSCRKRKVLVAFNLWMK------------YLKKISCLDDE 621
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 162/389 (41%), Gaps = 47/389 (12%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L ++GR +A++M + M +G+ + TY+ +I C D A L EM G P
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V +N+L+ +C+ + +A +LR + G + Y+ +I
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ K I PD Y+ L++ L ++ +A L M G+SPD Y ++ A C G
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ L EM PD T+ LI +C V EA EI + + G
Sbjct: 388 LLEEGRSLQLEMSETESFPD--------ACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 279 SPDAVCYSTVISGL--------------KIETEDKAIWWL-----DEDTYDSLMDSLS-- 317
SP ++ +I GL K+E A +L ++D++++S S
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSIL 499
Query: 318 --YED--------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
Y D +Y+ ++N + G++ AL+L + + G V Y+ LI
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 362 NGLHKKARTREAKRDLLYIASDGFLSMPS 390
NGLH+ R EA + L+ A D F P+
Sbjct: 560 NGLHRVGREEEAFK--LFYAKDDFRHSPA 586
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 170/427 (39%), Gaps = 69/427 (16%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
+ VI N D L E+ + G S + L+ AY + +KAV M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRL 185
E PDV +YN ++ + K P+ T+ LM+ L + R
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
S+A +F +M G+SP+ +TYT L++ C G A L EM G PD
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD------- 267
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLD 305
V +NAL+ G C L R+ EA E+LR + G + GL+
Sbjct: 268 -SVAHNALLDGFCKLGRMVEAFELLRLFEKDGF----------VLGLR------------ 304
Query: 306 EDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
Y SL+D L Y+ +A +L +M + + Y++LI GL
Sbjct: 305 --GYSSLIDGLFRARRYT-------------QAFELYANMLKKNIKPDIILYTILIQGLS 349
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 425
K + +A + L + S G +S +Y C N+ K+L R L ++
Sbjct: 350 KAGKIEDALKLLSSMPSKG-ISPDTY---------CYNAVIKALCG-------RGLLEEG 392
Query: 426 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 485
+ M ++ E+ D + +LI CR+ V +A ++ E+ G +P + +
Sbjct: 393 RSLQLEM------SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 486 LALISAL 492
ALI L
Sbjct: 447 NALIDGL 453
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
+Y+ +I FC ID A LL+ + KG SP VTYN+L+ R ++A + A
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK 578
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+ SP V Y +++ C + K D T + + + C ++
Sbjct: 579 DDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQ--CFKE-- 632
Query: 186 SEAFDLFREMLRGGVSPDELT---YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
E R ++ DELT YT L C G F +A + + K L VT
Sbjct: 633 GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKIL---VT- 688
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEIL 270
P+ V LIHGLC ++++ A+E+
Sbjct: 689 -PPSCV---KLIHGLCKREQLDAAIEVF 712
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 217/550 (39%), Gaps = 113/550 (20%)
Query: 36 LKRLCREGRIPEAEQML--------------------EVMKCKGLFLD--ERTYSS---- 69
+K LCR+G + EA +L E K L L+ +R Y +
Sbjct: 223 VKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 70 ------VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
V+ FCN K+ +A +++ EM GF V +++ YC+ ++ +A+G L
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLD 342
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
M +GL + + ++ +C D IF D Y+ +AL
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
R+ EAF+L +EM G+ PD + YT L++ CL G+ A L DEMI G PD
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD----- 457
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
++TYN L+ GL EE LEI M G P+AV S +I GL + K
Sbjct: 458 ---LITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA-- 512
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA----LQLDHDMSRDGYLSSYVAYSV 359
ED + SL + +S + Y G ++A ++L++ + + Y+ + +S+
Sbjct: 513 --EDFFSSLEQKCP--ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLF--FSL 566
Query: 360 LINGLHKKA------------------------------RTREAKRDLLYIASDGFLSMP 389
I G +KA REA+ + G + P
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI--P 624
Query: 390 SYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT--- 445
Y I++ C +E + L +D R + D T +T +L K D E+
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT-YTVLLDRYLKLDPEHHETCS 683
Query: 446 ------------------------DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 481
D Y +LI C+ +N+ +A ++ M+ G P
Sbjct: 684 VQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
Query: 482 MFSVLALISA 491
M + LIS+
Sbjct: 744 MVAYTTLISS 753
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 157/376 (41%), Gaps = 50/376 (13%)
Query: 32 AFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
AF +L +L GR+ EA ++L+ MK +G+ D Y+++I +C K+ A L+ EMI
Sbjct: 394 AFDALSKL---GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
G SP ++TYN LV R ++ + I M G P+ + + +I C
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 152 XXXXXXXXXVDK---------------GIFPDA-------------ATYSSLMEALCVEQ 183
K G+ A + Y L +LC+E
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
L +A D+ ++M V P +++ A C + +A L D M+ +G +PD
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD----- 625
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIW 302
+ TY +IH C L+ +++A + M + G+ PD V Y+ ++ LK++ E
Sbjct: 626 ---LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 303 WLDEDTYDSLMDSLSYEDT----------YSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 352
+ + + E + Y+ +++ N+++A +L M G
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 353 SYVAYSVLINGLHKKA 368
VAY+ LI+ +K
Sbjct: 743 DMVAYTTLISSYFRKG 758
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EG + +A +L+ M + +IG FC LN + A L M+ +G P
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ TY ++ YCR + + KA + M +RG+ PDV +Y ++ ++
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 159 XXVDK-------------GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
V K GI D Y+ L++ C L +A +LF M+ G+ PD +
Sbjct: 686 GEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 206 TYTRLLN----------ACCLVGEFTKAFHLHDE 229
YT L++ A LV E +K +++ E
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 8/240 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ RLC++G A+ + M KG+F + TY+ +I FC+ + A LL MI K
Sbjct: 17 VDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI 76
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P +VT+++L+ A+ + V +A I + M + P +YN +I FC
Sbjct: 77 NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKR 136
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
KG PD T+S+L+ C +R+ ++F EM R G+ + +TYT L++ C
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
VG+ A L +EMI G PD+ +T++ ++ GLC + +A IL + +
Sbjct: 197 QVGDLDAAQDLLNEMISCGVAPDY--------ITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 8/244 (3%)
Query: 68 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 127
++++ C +A L +EM KG P+V+TYN ++ ++C A +LR M E
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 128 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 187
+ ++PD+ +++ +I+ F + IFP TY+S+++ C + R+ +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 188 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
A + M G SPD +T++ L+N C + EM +G + +
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN--------T 185
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDED 307
VTY LIHG C + ++ A ++L M G++PD + + +++GL + E + + + ED
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 308 TYDS 311
S
Sbjct: 246 LQKS 249
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV ++V C+ + A + M E+G+ P+V +YN +I FC
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
++K I PD T+S+L+ A E+++SEA ++++EMLR + P +TY +++ C
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
A + D M KG PD +VT++ LI+G C RV+ +EI M G+
Sbjct: 130 RVDDAKRMLDSMASKGCSPD--------VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 279 SPDAVCYSTVISGL 292
+ V Y+T+I G
Sbjct: 182 VANTVTYTTLIHGF 195
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 33/238 (13%)
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
I D +++++ LC + A +LF EM G+ P+ LTY ++++ C G ++ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 225 HLHDEMIHKGFLPDFVTGFS----------------------------PAIVTYNALIHG 256
L MI K PD VT FS P +TYN++I G
Sbjct: 66 QLLRHMIEKQINPDIVT-FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 257 LCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDS 315
C DRV++A +L M G SPD V +ST+I+G K + D + E ++ +
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 316 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
TY+++++ + G++ A L ++M G Y+ + ++ GL K R+A
Sbjct: 185 TV---TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 239
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 47/289 (16%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G + EA + E M+ KG+F Y+++I ++ L+ E+ A+G +P+V TY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
+L+ +C +DKA M E+G++ +V+ +++ + VD
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 163 --------------------------------------KGIFPDAATYSSLMEALCVEQR 184
K + P+ Y+ + LC +
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 185 LSEAFDLFREMLRGG-VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
L +A LF ++L PDE TYT L++ C + G+ KAF L DEM KG +P+
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN----- 789
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
IVTYNALI GLC L V+ A +L +P+ G++P+A+ Y+T+I GL
Sbjct: 790 ---IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 168/414 (40%), Gaps = 58/414 (14%)
Query: 1 MALNVNIYNGMIRGFA--------TAAGKSDSE---SKKVGEAFQSLKRLCREGRIPEAE 49
+ LNV YN +I G+A T + SE S+ V +K C++G + EAE
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
+ E++K K L D+ Y ++ +C +I A + MI G + NSL+ Y
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
C+ + +A I M + L PD +YN ++ +C K + P
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
TY+ L++ + L++ ML+ GV+ DE++ + LL A +G+F +A L +
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
++ +G L D +T N +I GLC +++V EA EIL + P
Sbjct: 497 VLARGLLTD--------TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV------- 541
Query: 290 SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
TY ++ + Y GN++ A + M R G
Sbjct: 542 ------------------------------QTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN 403
+ Y+ LI+G K + ++ + + G P+ Y L+ N
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL--TPTVATYGALITGWCN 623
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 183/437 (41%), Gaps = 65/437 (14%)
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXX 147
+MI+ SP V T + +V AYCR +VDKA+ + + GL +V +YN +I+ +
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
++G+ + TY+SL++ C + + EA +F + + D+ Y
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 208 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 267
L++ C G+ A +HD MI G N+LI+G C ++ EA
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIE--------IGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 268 EILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDE----------DTYDSLMDSL 316
+I M + L PD Y+T++ G + D+A+ D+ TY+ L+
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 317 SY----------------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
S E + S+++ G+ A++L ++ G L+
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 355 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVK 414
+ +V+I+GL K + EAK L + + F P+ Y L S+ +K + L +
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNV--NIFRCKPAVQTYQAL----SHGYYK-VGNLKE 559
Query: 415 DYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 474
+++++ + T MYN LI + +++K ++ +E+
Sbjct: 560 AFAVKEYMERKGIFPTI----------------EMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 475 HYGHAPHMFSVLALISA 491
G P + + ALI+
Sbjct: 604 ARGLTPTVATYGALITG 620
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 161/371 (43%), Gaps = 12/371 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ L + G EA ++ E + +GL D T + +I C + K++ A +L +
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+V TY +L Y + ++ +A + M +G+ P ++ YN +IS
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+G+ P ATY +L+ C + +A+ EM+ G++ + +++ N+
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+ + +A L +++ L + G+ A ++ E++E P+
Sbjct: 658 RLDKIDEACLLLQKIVDFDLL---LPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPK 712
Query: 276 MGLSPDAVCYSTVISGL--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
L P+ + Y+ I+GL + ED + D + D + E TY+ +++ G
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPD---EYTYTILIHGCAIAG 769
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
++ +A L +M+ G + + V Y+ LI GL K A+R L + G P+
Sbjct: 770 DINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI--TPNAIT 827
Query: 394 YDILLENCSNS 404
Y+ L++ S
Sbjct: 828 YNTLIDGLVKS 838
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 141/339 (41%), Gaps = 38/339 (11%)
Query: 188 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
A ++ +M+ VSPD T + ++NA C G KA E + G +
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKE-------TESSLGLELNV 261
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDED 307
VTYN+LI+G + VE +LR M E G+S + V Y+++I G K + E
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYC----KKGLMEEAEH 317
Query: 308 TYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
++ L + ++ + Y +M+ Y G ++ A+++ +M G ++ + LING
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDD 424
K + EA++ ++ + + P + Y+ L++ C ++L +++
Sbjct: 378 KSGQLVEAEQ--IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 425 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 484
T YN+L+ + R H +++ M+ G S
Sbjct: 436 VMT----------------------YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 485 VLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVL 523
L+ AL +NE + N L L+D+ L V+
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKG-FSPSVVTYNSLVFAYCRRDSVDKAVGILRA 124
Y+ I C K++ A L S++++ F P TY L+ ++KA +
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
MA KGI P+ TY++L++ LC
Sbjct: 781 MAL-----------------------------------KGIIPNIVTYNALIKGLCKLGN 805
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 236
+ A L ++ + G++P+ +TY L++ G +A L ++MI KG +
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G I +A + + M KG+ + TY+++I C L +D A LL ++ KG +P+ +TY
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGL 130
N+L+ + +V +A+ + M E+GL
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EGR+ +A +++ M +G + Y ++I C + +SA LLS+M
Sbjct: 20 LCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESALNLLSKMEETHIKAH 75
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VV YN+++ C+ A + M ++G+ PDV +Y+ +I FC
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+++ I PD T+S+L+ AL E ++SEA +++ +MLR G+ P +TY +++ C
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
A + D M K PD +VT++ LI+G C RV+ +EI M G+
Sbjct: 196 RLNDAKRMLDSMASKSCSPD--------VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 247
Query: 279 SPDAVCYSTVISGL 292
+ V Y+T+I G
Sbjct: 248 VANTVTYTTLIHGF 261
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ RLC++G A+ + M KG+F D TYS +I FC + A LL +MI +
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P VVT+++L+ A + V +A I M RG+ P +YN +I FC
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
K PD T+S+L+ C +R+ ++F EM R G+ + +TYT L++ C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
VG+ A L + MI G P++ +T+ +++ LC + +A IL + +
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNY--------ITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP------------DVDS- 136
M+ G P VVT+ +L+ C V +A+ ++ M E G P D +S
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 137 ------------------YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
YN +I + C DKGIFPD TYS ++++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
C R ++A L R+M+ ++PD +T++ L+NA G+ ++A ++ +M+ +G
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF-- 178
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETE 297
P +TYN++I G C DR+ +A +L M SPD V +ST+I+G K +
Sbjct: 179 ------PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 298 DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 357
D + E ++ + TY+++++ + G++ A L + M G +Y+ +
Sbjct: 233 DNGMEIFCEMHRRGIVANTV---TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 358 SVLINGLHKKARTREA 373
++ L K R+A
Sbjct: 290 QSMLASLCSKKELRKA 305
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
M E G PDV ++ +++ C V++G P Y +++ LC
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
A +L +M + + Y +++ C G A +L EM KG PD
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPD------ 110
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE---TEDKAI 301
++TY+ +I C R +A ++LR M E ++PD V +S +I+ L E +E + I
Sbjct: 111 --VITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
Query: 302 W--------WLDEDTYDSLMDSLSYED----------------------TYSSVMNDYLA 331
+ + TY+S++D +D T+S+++N Y
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
+ +++ +M R G +++ V Y+ LI+G + +A +DLL + ++ P+Y
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL-DAAQDLLNVMISSGVA-PNY 286
Query: 392 TVYDILLEN-CSNSEFKSLVELVKD 415
+ +L + CS E + +++D
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILED 311
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 15/337 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC++G+ EA ++L M+ +G+ + +Y++V+ C +D A + S ++ KG
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+ TY+ L+ R A+ ++ M + + Y +I+ C
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569
Query: 156 XXXXXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+ +K + +Y+S+++ E + A + EM G+SP+ +TYT L+N
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C +A + DEM +KG D I Y ALI G C +E A + +
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLD--------IPAYGALIDGFCKRSNMESASALFSELL 681
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLM-DSLSYE-DTYSSVMNDYLAE 332
E GL+P Y+++ISG + A D Y ++ D L + TY+++++ L +
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAAL----DLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
GN+ A +L +M G + + Y+V++NGL KK +
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 205/523 (39%), Gaps = 91/523 (17%)
Query: 22 SDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 81
SD S V A + C+ + A + + M+ +G + T+S +I WF +++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 82 SAHTLLSEMIAKGFSPSVVTYNSLVFAY-------------------------------- 109
A +M G +PSV ++++ +
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS 451
Query: 110 --CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
C++ D+A +L M RG+ P+V SYN V+ C ++KG+ P
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
+ TYS L++ A ++ M + + + Y ++N C VG+ +KA L
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 228 DEMIHK---------------GFLPDFV-------------TGFSPAIVTYNALIHGLCF 259
MI + GF + G SP ++TY +L++GLC
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 260 LDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSY 318
+R+++ALE+ M G+ D Y +I G K + A E + L S
Sbjct: 632 NNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS--- 688
Query: 319 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLL 378
+ Y+S+++ + GNM AL L M +DG Y+ LI+GL K A L
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE--L 746
Query: 379 YIASDGFLSMPSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 437
Y +P +Y +++ S +F +V++ ++ +++ +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL----------- 795
Query: 438 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 480
+YN +I H R N+ +A+ ++ EM+ G P
Sbjct: 796 -----------IYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 47/336 (13%)
Query: 30 GEAFQSL-KRLCREGRIPEAEQML-EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL 87
G +Q++ LC+ G+ +A ++L +++ K L + +Y+S+I F ++DSA
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 88 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 147
EM G SP+V+TY SL+ C+ + +D+A+ + M +G+ D+ +Y +I FC
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR 667
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
+++G+ P Y+SL+ + A DL+++ML+ G+ D TY
Sbjct: 668 SNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 208 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 267
T L++ G A L+ EM G +PD + Y +++GL + + +
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDE--------IIYTVIVNGLSKKGQFVKVV 779
Query: 268 EILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 327
++ M + ++P+ + Y+ VI+G
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAG------------------------------------ 803
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
+ EGN+ A +L +M G L + +L++G
Sbjct: 804 -HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 194/500 (38%), Gaps = 44/500 (8%)
Query: 34 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
++L L + + EA+++ M G+ D T ++ K A +LS I +
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLS-PDVDSYNRVISKFCXXXXXXX 152
G P + Y+ V A C+ + A +LR M E+ L P ++Y VI
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
+ GI + +SL+ C L A LF +M + G SP+ +T++ L+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLP---------------------------DFVTGFSP 245
GE KA + +M G P F TG +
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLD 305
V N ++ LC + +EA E+L M G+ P+ V Y+ V+ G + +
Sbjct: 443 VFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 306 EDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
+ + + +Y TYS +++ + Q AL++ + M+ + V Y +INGL
Sbjct: 502 SNILEKGLKPNNY--TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 425
K +T +A+ L + + L + + I+ E S V ++ +S +
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 426 ATAHTTM------------LHLKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYME 472
T + M L ++++ + K D Y LI C+ N+ A ++ E
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 473 MVHYGHAPHMFSVLALISAL 492
++ G P +LIS
Sbjct: 680 LLEEGLNPSQPIYNSLISGF 699
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 190/520 (36%), Gaps = 96/520 (18%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMI--AK--GFSPSVVTYNSLVFAYCRRDSVDKAVG 120
R +I + N A L+S+++ AK GF + +N L+ AY + D AV
Sbjct: 125 RASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVD 184
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
I+ M E + P NR +S V G+ D T LM A
Sbjct: 185 IVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASL 244
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV----------------------- 217
E++ +EA ++ + G PD L Y+ + ACC
Sbjct: 245 REEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 218 -------------GEFTKAFHLHDEMIHKGFLPDFVT----------------------- 241
G A L DEM+ G + V
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Query: 242 ----GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIET 296
G SP VT++ LI +E+ALE + M +GL+P T+I G LK +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 297 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
++A+ DE S L+ +++++ +G A +L M G + V+
Sbjct: 425 HEEALKLFDE----SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLS---MPSYTVYDILLENC-SNSEFKSLVEL 412
Y+ ++ G R+ DL I L P+ Y IL++ C N + ++ +E+
Sbjct: 481 YNNVMLG-----HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 413 VKDYSMRDLSDDAATAHTTMLHL--KNKTDGENKTDGGM------------YNLLIFEHC 458
V + ++ + T + L +T + M YN +I
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 459 RSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-DDDRM 497
+ + A Y EM G +P++ + +L++ L ++RM
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 43/371 (11%)
Query: 29 VGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 88
V + Q L LC+ R+ +A +++E+M G+ D Y+ ++ C + A L+
Sbjct: 106 VAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVE 165
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 148
+M G+ + VTYN+LV C S+++++ + + ++GL+P+ +Y+ ++
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER 225
Query: 149 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 208
+ KG P+ +Y+ L+ C E R +A LFRE+ G + ++Y
Sbjct: 226 GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN 285
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 268
LL C G + +A L EM +P++VTYN LI+ L F R E+AL+
Sbjct: 286 ILLRCLCCDGRWEEANSLLAEMDGG--------DRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 269 ILRGMPEMG--LSPDAVCYSTVISGLKIETE-DKAIWWLD----------EDTYDS---- 311
+L+ M + A Y+ VI+ L E + D + LD E TY++
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSL 397
Query: 312 ------------LMDSLSYE------DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 353
++ SLS + D Y SV+ +GN A QL ++M+R G+
Sbjct: 398 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD 457
Query: 354 YVAYSVLINGL 364
YS LI GL
Sbjct: 458 AHTYSALIRGL 468
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 175/421 (41%), Gaps = 49/421 (11%)
Query: 87 LSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCX 146
L ++ G P+V L++ C+ + + KA+ ++ M G+ PD +Y ++++ C
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 147 XXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT 206
D G + TY++L+ LC+ L+++ +++ G++P+ T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 207 YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 266
Y+ LL A +A L DE+I V G P +V+YN L+ G C R ++A
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEII--------VKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 267 LEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED---TYS 323
+ + R +P G + V Y+ ++ L + W + ++ + MD TY+
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGR-----WEEANSLLAEMDGGDRAPSVVTYN 320
Query: 324 SVMNDYLAEGNMQRALQLDHDMSRDG--YLSSYVAYSVLINGLHKKARTREAKRDLLYIA 381
++N G ++ALQ+ +MS+ + + +Y+ +I L K E K DL+
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK-----EGKVDLVVKC 375
Query: 382 SDGFL---SMPSYTVYDILLENCS-NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 437
D + P+ Y+ + C NS+ + +++ S + H
Sbjct: 376 LDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK----QKCCTHD------- 424
Query: 438 KTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRM 497
Y +I CR N A+ + EM G P + ALI L + M
Sbjct: 425 -----------FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 498 Y 498
+
Sbjct: 474 F 474
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 147/355 (41%), Gaps = 54/355 (15%)
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
E LS++F ++ GG P+ T+LL C KA + + M+ G +PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 242 ---------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G+ VTYNAL+ GLC L + ++L+ + +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 275 EMGLSPDAVCYSTVI-SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
+ GL+P+A YS ++ + K D+A+ LDE +L +Y+ ++ + EG
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV---SYNVLLTGFCKEG 260
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
A+ L ++ G+ ++ V+Y++L+ L R EA + L DG PS
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA--NSLLAEMDGGDRAPSVVT 318
Query: 394 YDILLENCS-NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 452
Y+IL+ + + + + ++++K+ S K + + + YN
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEMS--------------------KGNHQFRVTATSYNP 358
Query: 453 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINN 507
+I C+ V EM++ P+ + A+ S + + E ++I +
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 2/165 (1%)
Query: 33 FQSLKRLCREG-RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
+ ++ LC ++ EA +++ + K Y SVI C +A LL EM
Sbjct: 391 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE-RGLSPDVDSYNRVISKFCXXXXX 150
GF P TY++L+ C A+ +L M E P VD++N +I C
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
V+K P+ TY+ L+E + E L A ++ E+
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLN-KIDSAHTLLSEMIAKG 94
+ RLC+EG++ + L+ M + +E TY++ IG C N K+ A ++ + K
Sbjct: 360 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQ 418
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
+ Y S++ + CR+ + A +L M G PD +Y+ +I C
Sbjct: 419 KCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAM 478
Query: 155 XXXXXXVD-KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
+ + P +++++ LC +R A ++F M+ P+E TY L+
Sbjct: 479 EVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Query: 214 CCLVGEFTKAFHLHDEM 230
E A + DE+
Sbjct: 539 IAHEDELELAKEVLDEL 555
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 198/475 (41%), Gaps = 34/475 (7%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
K L +G + +A L M+ G L+ +Y+ +I A + MI +GF
Sbjct: 160 FKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGF 219
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PS+ TY+SL+ +R +D +G+L+ M GL P+V ++ I
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
D+G PD TY+ L++ALC ++L A ++F +M G PD +TY LL+
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+ EM G +PD +VT+ L+ LC EA + L M +
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPD--------VVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 276 MGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLA 331
G+ P+ Y+T+I G L++ D A+ M+SL + TY ++ Y
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGN------MESLGVKPTAYTYIVFIDYYGK 445
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
G+ AL+ M G + VA + + L K R REAK+ + G + P
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV--PDS 503
Query: 392 TVYDILLENCSN-SEFKSLVELVKDYSMRDLSDDAATAHTTM--LHLKNKTDGENKTDGG 448
Y+++++ S E ++L+ + D ++ + L+ ++ D K
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 449 M-----------YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
M YN L+ ++ + +A ++ MV G P+ + L L
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 159/361 (44%), Gaps = 15/361 (4%)
Query: 40 CREGRIPEAEQMLE-VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ + A + E K G+ TY+ +IG + I+ A + ++ + G P
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V TYN L+ AY + +D+ + + M+ + ++N VIS
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 159 XXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ D+ P A TY L++ L RL EA LF ML G P+ Y L+N
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
GE A L M+ +G PD + TY+ L+ LC + RV+E L + + E G
Sbjct: 940 GEADAACALFKRMVKEGVRPD--------LKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 278 LSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 336
L+PD VCY+ +I+GL K ++A+ +E + Y TY+S++ + G ++
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY--TYNSLILNLGIAGMVE 1049
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 396
A ++ +++ R G + ++ LI G + A + + GF P+ Y+
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF--SPNTGTYEQ 1107
Query: 397 L 397
L
Sbjct: 1108 L 1108
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 196/474 (41%), Gaps = 49/474 (10%)
Query: 35 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 94
SL L + GR EA+Q+ +K GL D TY+ ++ + + +ID A LLSEM+ G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P V+ NSL+ + D VD+A + M E L P V +YN +++
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
V KG P+ T+++L + LC ++ A + +M+ G PD TY ++
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Query: 215 CLVGEFTKA---FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
G+ +A FH ++++ PDF VT L+ G+ +E+A +I+
Sbjct: 654 VKNGQVKEAMCFFHQMKKLVY----PDF--------VTLCTLLPGVVKASLIEDAYKIIT 701
Query: 272 G-MPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 329
+ P + + +I + E D A+ + + + + + ++
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI--CRDGDSILVPIIRYS 759
Query: 330 LAEGNMQRALQLDHDMSRD-GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS- 387
N+ A L ++D G Y++LI GL + D++ IA D FL
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL--------LEADMIEIAQDVFLQV 811
Query: 388 -----MPSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 441
+P Y+ LL+ S + L EL K+ S + + T + + L +
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 442 ENKTD--------------GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 481
++ D Y LI +S +++A ++ M+ YG P+
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 161/411 (39%), Gaps = 86/411 (20%)
Query: 28 KVGEAFQSLKRLCREGRIPE-------------------AEQMLEVMKCKGLFLDERTYS 68
K+ EA++ LKR+ EG P+ A+++ E MK D TY
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 69 SVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER 128
+++ F + +DS SEM G P VVT+ LV A C+ + +A L M ++
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 129 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME----------- 177
G+ P++ +YN +I G+ P A TY ++
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 178 ------------------------ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
+L R EA +F + G+ PD +TY ++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
VGE +A L EM+ G PD ++ N+LI+ L DRV+EA ++ M
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPD--------VIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 274 PEMGLSPDAVCYSTVISGLKIETEDKAIWWLDED-----------TYDSLMDSLSYEDTY 322
EM L P V Y+T+++GL + + L E T+++L D L D
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND-- 622
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
+ AL++ M G + Y+ +I GL K + +EA
Sbjct: 623 -----------EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + GR+ EA+Q+ E M G + Y+ +I F + D+A L M+ +G P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX-XXXXXXXXXX 157
+ TY+ LV C VD+ + + + E GL+PDV YN +I+
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+GI PD TY+SL+ L + + EA ++ E+ R G+ P+ T+ L+ L
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 218 GEFTKAFHLHDEMIHKGFLPD 238
G+ A+ ++ M+ GF P+
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPN 1101
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 63
N IYN +I GF AG++D+ A KR+ +EG P D
Sbjct: 925 NCAIYNILINGFG-KAGEADA-------ACALFKRMVKEGVRP----------------D 960
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
+TYS ++ C + ++D E+ G +P VV YN ++ + +++A+ +
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 124 AM-AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M RG++PD+ +YN +I G+ P+ T+++L+ +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
+ A+ +++ M+ GG SP+ TY +L N
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 152/427 (35%), Gaps = 72/427 (16%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY-CRRDSVDKAVGILRAM 125
+ +IG ID+A + ++A G + + Y C+ ++V A +
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 126 AER-GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
+ G+ P + +YN +I G PD ATY+ L++A +
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
+ E F+L++EM + +T+ +++ G A L+ +++ FS
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD-------RDFS 888
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWL 304
P TY LI GL R+ EA ++ GM + G P+ Y+ +I
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI--------------- 933
Query: 305 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
N + G A L M ++G YSVL++ L
Sbjct: 934 ----------------------NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 365 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEF--KSLVELVKDYSMRDLS 422
R E + G P Y++++ S ++LV + + R ++
Sbjct: 972 CMVGRVDEGLHYFKELKESGL--NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 423 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 482
D T YN LI + V +A +Y E+ G P++
Sbjct: 1030 PDLYT----------------------YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 483 FSVLALI 489
F+ ALI
Sbjct: 1068 FTFNALI 1074
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 185/432 (42%), Gaps = 36/432 (8%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
+++ VI C L +D A + M + P TY +L+ C+ + +D+AV +L M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
G SP YN +I C KG P+ TY++L+ LC++ +L
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF-LPDFVTGFS 244
+A L M+ P+++TY L+N T A L M +G+ L +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI---- 364
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWL 304
Y+ LI GL + EEA+ + R M E G P+ V YS ++ GL E +
Sbjct: 365 -----YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA--- 416
Query: 305 DEDTYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
++ + ++ S L TYSS+M + G + A+Q+ +M + G + YSVLI+
Sbjct: 417 -KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 363 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 422
GL R +EA + + G P Y +++ L SM
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGI--KPDTVAYSSIIKG-----------LCGIGSM---- 518
Query: 423 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 482
D A + ML + + +++ D YN+L+ C ++ +A ++ M+ G P +
Sbjct: 519 DAALKLYHEMLC---QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Query: 483 FSVLALISALDD 494
+ ++ L +
Sbjct: 576 ITCNTFLNTLSE 587
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 183/425 (43%), Gaps = 20/425 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K LC+ + A ++ M + D TY +++ C +ID A LL EM ++G
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
SPS V YN L+ C++ + + ++ M +G P+ +YN +I C
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V P+ TY +L+ L ++R ++A L M G ++ Y+ L++
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ +A L +M KG P+ IV Y+ L+ GLC + EA EIL M
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPN--------IVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 276 MGLSPDAVCYSTVISG-LKIETEDKAIW-WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
G P+A YS+++ G K ++A+ W + D + YS +++ G
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF----CYSVLIDGLCGVG 481
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY---IASDGFLSMPS 390
++ A+ + M G VAYS +I GL A + LY + + S P
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK--LYHEMLCQEEPKSQPD 539
Query: 391 YTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 449
Y+ILL+ C + V+L+ R D T +T + L K++ +K +
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 450 YNLLI 454
L++
Sbjct: 600 EELVV 604
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 198/488 (40%), Gaps = 74/488 (15%)
Query: 46 PEAEQMLEVMKCKGLF-LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
P +E+M + G F L + T SS+I + N DS LLS + V+ S
Sbjct: 58 PISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRI---RLENRVIIERS 114
Query: 105 LVF---AYCRRDSVDKAVGILRAMA-ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
+ AY + DKAV + M E V S+N V++
Sbjct: 115 FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174
Query: 161 VDKG----IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
V+ I P+ +++ +++ALC + + A ++FR M PD TY L++ C
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 217 VGEFTKAFHLHDEMIHKGFLPD---------------------------FVTGFSPAIVT 249
+A L DEM +G P F+ G P VT
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDT 308
YN LIHGLC ++++A+ +L M P+ V Y T+I+GL K A+ L
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL---- 350
Query: 309 YDSLMDSLSY---EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
S M+ Y + YS +++ EG + A+ L M+ G + V YSVL++GL
Sbjct: 351 --SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 425
++ + EAK L + + G L P+ Y L+K + L ++A
Sbjct: 409 REGKPNEAKEILNRMIASGCL--PNAYTYS---------------SLMKGFFKTGLCEEA 451
Query: 426 ATAHTTMLHLKNKTD-GENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 484
M +KT NK Y++LI C V +A ++ +M+ G P +
Sbjct: 452 VQVWKEM----DKTGCSRNKF---CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 485 VLALISAL 492
++I L
Sbjct: 505 YSSIIKGL 512
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 44/339 (12%)
Query: 187 EAFDLFREMLRGGVSPDEL-------TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
+A DLF M+ DE ++ +LN G + + +D +++ +
Sbjct: 130 KAVDLFHRMV------DEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS----NM 179
Query: 240 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETED 298
SP +++N +I LC L V+ A+E+ RGMPE PD Y T++ GL K E D
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 299 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
+A+ LDE + S Y+ +++ +G++ R +L +M G + + V Y+
Sbjct: 240 EAVLLLDEMQSEGCSPS---PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 359 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM 418
LI+GL K + +A L + S +P+ Y L+ LVK
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSK--CIPNDVTYGTLING-----------LVKQRRA 343
Query: 419 RDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 478
D ++ HL +Y++LI + +A +++ +M G
Sbjct: 344 TDAVRLLSSMEERGYHLNQH----------IYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 479 APHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDS 517
P++ L+ L + NE ++N + S L ++
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNA 432
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 173/359 (48%), Gaps = 15/359 (4%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
ML++MK G+ D T SS++ FC N I A + +M G VV L+ C
Sbjct: 1 MLKMMKL-GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLC 59
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
+ V A+ +L+ M +RG+SP+V +Y+ +I+ C K I P+
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
T+S+L++A +LS+ +++ M++ + P+ TY+ L+ C+ +A + D M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
I KG P+ +VTY+ L +G RV++ +++L MP+ G++ + V +T+I
Sbjct: 180 ISKGCTPN--------VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 291 G-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
G + D A+ T + L+ ++ +Y+ V+ A G +++AL M +
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIR---SYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS 408
+ Y+++I+G+ K +EA DL Y + P + Y I++ + + ++
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEA-YDLFYKLKFKRVE-PDFKAYTIMIAELNRAGMRT 345
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 173/413 (41%), Gaps = 70/413 (16%)
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 148
+M+ G P +VT +SLV +C +S+ AV + M + G+ DV +I C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 149 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 208
D+GI P+ TYSSL+ LC RL++A EM ++P+ +T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 268
L++A G+ +K ++ MI P + TY++LI+GLC +RV+EA++
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQ--------MSIDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 269 ILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 328
+L M G +P+ V TYS++ N
Sbjct: 175 MLDLMISKGCTPNVV-------------------------------------TYSTLANG 197
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
+ + ++L DM + G ++ V+ + LI G + + A Y+ S+G +
Sbjct: 198 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLI-- 255
Query: 389 PSYTVYDILLENC-SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 447
P+ Y+I+L +N E + A + H++ N D
Sbjct: 256 PNIRSYNIVLAGLFANGEVEK-------------------ALSRFEHMQKT---RNDLDI 293
Query: 448 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
Y ++I C++ V +AY+++ ++ P + +I+ L+ M E
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTE 346
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ + A ++L+ MK +G+ + TYSS+I C ++ A L EM +K +P+
Sbjct: 58 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+T+++L+ AY +R + K + + M + + P+V +Y+ +I C
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ KG P+ TYS+L R+ + L +M + GV+ + ++ L+ G
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A + M G +P+ I +YN ++ GL VE+AL M +
Sbjct: 238 KIDLALGVFGYMTSNGLIPN--------IRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 279 SPDAVCYSTVISGL 292
D + Y+ +I G+
Sbjct: 290 DLDIITYTIMIHGM 303
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 9/256 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L L R G + E +++ M + D T+++++ +C L + A ++ +I G
Sbjct: 127 LSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC 186
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P TY S + +CRR VD A + + M + G + SY ++I
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
D P+ TY+ L++ALC + SEA +LF++M G+ PD+ YT L+ + C
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+A L + M+ G +P+ ++TYNALI G C V +A+ +L M E
Sbjct: 307 SGDTLDEASGLLEHMLENGLMPN--------VITYNALIKGFC-KKNVHKAMGLLSKMLE 357
Query: 276 MGLSPDAVCYSTVISG 291
L PD + Y+T+I+G
Sbjct: 358 QNLVPDLITYNTLIAG 373
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ G + EA+Q + + G D TY+S I C ++D+A + EM G +
Sbjct: 166 CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNE 225
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
V+Y L++ +D+A+ +L M + P+V +Y +I C
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ GI PD Y+ L+++ C L EA L ML G+ P+ +TY L+ C
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKN 344
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
KA L +M+ + +PD ++TYN LI G C ++ A +L M E GL
Sbjct: 345 VHKAMGLLSKMLEQNLVPD--------LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Query: 280 PD 281
P+
Sbjct: 397 PN 398
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 27 KKVGEAFQSLKRLCREG-------------------RIPEAEQMLEVMKCKGLFLDERTY 67
K+V AF+ K + + G +I EA +L MK + RTY
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 68 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 127
+ +I C + A L +M G P Y L+ ++C D++D+A G+L M E
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 128 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 187
GL P+V +YN +I FC +++ + PD TY++L+ C L
Sbjct: 324 NGLMPNVITYNALIKGFCKKNVHKAMGLLSKM-LEQNLVPDLITYNTLIAGQCSSGNLDS 382
Query: 188 AFDLFREMLRGGVSPDELT 206
A+ L M G+ P++ T
Sbjct: 383 AYRLLSLMEESGLVPNQRT 401
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 127/315 (40%), Gaps = 36/315 (11%)
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
Y++L+ +L + E L+ EML VSPD T+ L+N C +G +A +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
G PD+ T Y + I G C V+ A ++ + M + G + V Y+ +I G
Sbjct: 183 QAGCDPDYFT--------YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYG 234
Query: 292 L-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
L + + D+A+ L + D+ ++ TY+ +++ G A+ L MS G
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVR---TYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLV 410
Y+VLI EA L ++ +G MP+ Y+ L++ +
Sbjct: 292 KPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL--MPNVITYNALIKGFCKKNVHKAM 349
Query: 411 ELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 470
L+ ++L D T YN LI C S N+ AY +
Sbjct: 350 GLLSKMLEQNLVPDLIT----------------------YNTLIAGQCSSGNLDSAYRLL 387
Query: 471 MEMVHYGHAPHMFSV 485
M G P+ +V
Sbjct: 388 SLMEESGLVPNQRTV 402
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 61/285 (21%)
Query: 224 FHLHDEM--IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
F L +EM ++ L D V SP I T+N L++G C L V EA + + + + G PD
Sbjct: 133 FGLVEEMKRLYTEMLEDLV---SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPD 189
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
Y++ I+G + + A ++
Sbjct: 190 YFTYTSFITG-------------------------------------HCRRKEVDAAFKV 212
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN- 400
+M+++G + V+Y+ LI GL + + EA L+ + D P+ Y +L++
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN--CCPNVRTYTVLIDAL 270
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM----------- 449
C + + + L K S + D +T ++ D ++ G +
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDC-MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 450 ---YNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
YN LI C+ NVHKA + +M+ P + + LI+
Sbjct: 330 VITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 230/545 (42%), Gaps = 96/545 (17%)
Query: 38 RLCREGRIPEAEQMLEVMKCKGLF--LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG- 94
R +G + A ++LE+M K + D S+VI FC + K + A + G
Sbjct: 143 RFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGV 202
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P++VTY +LV A C+ VD+ ++R + + G D Y+ I +
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
V+KG+ D +YS L++ L E + EA L +M++ GV P+ +TYT ++
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPD---FVT------------------------GFSPAI 247
C +G+ +AF L + ++ G D +VT G P+I
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI-SGLKIETEDKAI----- 301
+TYN +I+GLC RV EA E+ + G+ D + YST++ S +K++ D +
Sbjct: 383 LTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRR 437
Query: 302 ------------------WWLDEDTY---DSLMDSLSYED------TYSSVMNDYLAEGN 334
+L Y D+L ++ D TY++++ Y G
Sbjct: 438 FLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQ 497
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
++ AL++ +++ R +S+ V Y+ +I+ L KK A L+ + G L + +T
Sbjct: 498 IEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG-LYLDIHTSR 555
Query: 395 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLI 454
+L +N K ++ LV Y + L+ D GM N I
Sbjct: 556 TLLHSIHANGGDKGILGLV--YGLEQLNSDVCL--------------------GMLNDAI 593
Query: 455 FEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVIN---NTLRS 511
C+ + A +YM M G S + L + +D+ R + V+N TL S
Sbjct: 594 LLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLRSLDAYLLVVNAGETTLSS 652
Query: 512 CNLSD 516
++ D
Sbjct: 653 MDVID 657
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 53/366 (14%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK---------------G 94
Q + K + ++ R YS V F NLN+ + A ++ I+K G
Sbjct: 47 QFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG 106
Query: 95 FS-----------------------PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLS 131
FS PS +T+ SL++ + + +D A+ +L M + ++
Sbjct: 107 FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 166
Query: 132 PDVDSY--NRVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVEQRLSEA 188
D++ + VIS FC VD G+ P+ TY++L+ ALC ++ E
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 189 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV 248
DL R + G D + Y+ ++ G A EM+ KG D +V
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRD--------VV 278
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDED 307
+Y+ LI GL VEEAL +L M + G+ P+ + Y+ +I GL K+ ++A +
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 308 TYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
+ E Y ++++ +GN+ RA + DM + G S + Y+ +INGL
Sbjct: 339 LSVGIEVD---EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 368 ARTREA 373
R EA
Sbjct: 396 GRVSEA 401
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 193/468 (41%), Gaps = 76/468 (16%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+CR+G + A ML M+ +G+ TY++VI C ++ A + ++KG
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGD 411
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V+TY++L+ +Y + ++D + I R E + D+ N ++ F
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + PD ATY+++++ C ++ EA ++F E+ + VS + Y R+++A C G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKG 530
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT-----------GFSPAIVTYNALIHGL---------- 257
A + E+ KG D T G I+ L++GL
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL---GLVYGLEQLNSDVCLG 587
Query: 258 ---------CFLDRVEEALEILRGMPEMGLS---PDAVCYSTVISGLK--------IETE 297
C E A+E+ M GL+ P + T++ L+ +
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLRSLDAYLLVVNAG 646
Query: 298 DKAIWWLDEDTYDSLMDSLSYED----------------------TYSSVMNDYLAEGNM 335
+ + +D Y +++ L E TY+S++N +G +
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
AL+L + G + S V Y +LI+ L K+ +A++ L + S G + P+ +Y+
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV--PNIIIYN 764
Query: 396 ILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGE 442
+++ C + + + +V M ++ DA T + + K D E
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 204/538 (37%), Gaps = 97/538 (18%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ LC+ G++ EA + + G+ +DE Y ++I C ++ A ++L +M +G
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PS++TYN+++ C V +A + +G+ DV +Y+ ++ +
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLE 433
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
++ I D + L++A + EA L+R M ++PD TY ++ C
Sbjct: 434 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYC 493
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+ +A + +E+ A V YN +I LC ++ A E+L + E
Sbjct: 494 KTGQIEEALEMFNELRKSSV---------SAAVCYNRIIDALCKKGMLDTATEVLIELWE 544
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAI----WWLDEDTYD--------------------- 310
GL D T++ + DK I + L++ D
Sbjct: 545 KGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEA 604
Query: 311 -----------------------SLMDSLSYEDTYSSVMN------------DY------ 329
+L+D+L D Y V+N DY
Sbjct: 605 AIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIING 664
Query: 330 -LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
EG + +AL L G + + Y+ LINGL ++ EA R L+ + + +
Sbjct: 665 LCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR--LFDSLENIGLV 722
Query: 389 PSYTVYDILLEN-CSNSEF------------KSLVELVKDY-SMRDLSDDAATAHTTMLH 434
PS Y IL++N C F K LV + Y S+ D M
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 435 LKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ K G D + +I +C+ ++ +A +++ E + F L LI
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGF 840
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 3/255 (1%)
Query: 19 AGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLN 78
AG++ S V + + LC+EG + +A + K +G+ L+ TY+S+I C
Sbjct: 645 AGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
+ A L + G PS VTY L+ C+ A +L +M +GL P++ YN
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
++ +C + + PDA T SS+++ C + + EA +F E
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV---TYNALIH 255
+S D + L+ C G +A L EM+ + + + + +
Sbjct: 825 NISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLV 884
Query: 256 GLCFLDRVEEALEIL 270
LC RV +A++IL
Sbjct: 885 ELCEQGRVPQAIKIL 899
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
+D Y+ +I C + A L S ++G + + +TYNSL+ C++ + +A+ +
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
++ GL P +Y +I C V KG+ P+ Y+S+++ C
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+ +A + + G V+PD T + ++ C G+ +A + E K DF
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF- 831
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
GF LI G C R+EEA +LR M
Sbjct: 832 GFL-------FLIKGFCTKGRMEEARGLLREM 856
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 174/418 (41%), Gaps = 63/418 (15%)
Query: 7 IYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERT 66
IY+G+I G T L LC+ G I +A+ ++ M+ G + +
Sbjct: 148 IYSGVIPGLITHN--------------HLLNGLCKAGYIEKADGLVREMREMGPSPNCVS 193
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD------------- 113
Y+++I C++N +D A L + M G P+ VT N +V A C++
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 114 --------------------------SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 147
+V +A+ + + M+++ + D YN +I C
Sbjct: 254 LDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSS 313
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
V +G+ PD TY++L+ ALC E + EA DL M GGV+PD+++Y
Sbjct: 314 GNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISY 373
Query: 208 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 267
++ C+ G+ +A M+ LP+ ++ +N +I G AL
Sbjct: 374 KVIIQGLCIHGDVNRANEFLLSMLKSSLLPE--------VLLWNVVIDGYGRYGDTSSAL 425
Query: 268 EILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 327
+L M G+ P+ + +I G WW+ + + + + TY+ ++
Sbjct: 426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT--TTYNLLLG 483
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
G+++ A QL +M R G + Y+ L+ GL K R ++A+ L I + G
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+ G + +A ++ + M K + D Y+ +I C+ + +A+ + +M+ +G +P V
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF 336
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX----------- 149
TYN+L+ A C+ D+A + M G++PD SY +I C
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 150 ------------------------XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+ G+ P+ T ++L+ RL
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
+A+ + EM + PD TY LL A C +G AF L+DEM+ +G PD
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD------- 509
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
I+TY L+ GLC+ R+++A +L + G++ D V +
Sbjct: 510 -IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 181/433 (41%), Gaps = 43/433 (9%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
+SS++ C K+D+A L +MI G P ++T+N L+ C+ ++KA G++R M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL- 185
E G SP+ SYN +I C GI P+ T + ++ ALC + +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 186 SEAFDLFREML---RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ L E+L + D + T L+++C G +A + EM K D V
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV- 302
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAI 301
YN +I GLC + A + M + G++PD Y+T+IS L E + D+A
Sbjct: 303 -------YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355
Query: 302 WWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
D + ++ + D +Y ++ G++ RA + M + L + ++V
Sbjct: 356 -----DLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
+I+G + T A L + S G P+ + L+ VK +
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGV--KPNVYTNNALIHG-----------YVKGGRLI 457
Query: 420 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHA 479
D +T +H D YNLL+ C ++ A+ +Y EM+ G
Sbjct: 458 DAWWVKNEMRSTKIH----------PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Query: 480 PHMFSVLALISAL 492
P + + L+ L
Sbjct: 508 PDIITYTELVRGL 520
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 7 IYNGMIRGFATAAGK-------SDSESKKVGE---AFQSL-KRLCREGRIPEAEQMLEVM 55
+YN +IRG ++ D + V + +L LC+EG+ EA + M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
+ G+ D+ +Y +I C ++ A+ L M+ P V+ +N ++ Y R
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
A+ +L M G+ P+V + N +I + I PD TY+ L
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ A C L AF L+ EMLR G PD +TYT L+ C G KA L + G
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 236 LPDFV 240
D V
Sbjct: 542 TIDHV 546
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 70/297 (23%)
Query: 207 YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 266
++ ++ CL G+ A L +MI+ G +P ++T+N L++GLC +E+A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIP--------GLITHNHLLNGLCKAGYIEKA 175
Query: 267 LEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVM 326
++R M EMG SP+ V Y+T+I GL
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGL---------------------------------- 201
Query: 327 NDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY-IASDGF 385
+ N+ +AL L + M++ G + V +++++ L +K + LL I
Sbjct: 202 ---CSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 386 LSMP-SYTVYDILLENC-SNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGEN 443
+ P + IL+++C N +E+ K+ S +++ D+
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV----------------- 301
Query: 444 KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNE 500
+YN++I C S N+ AY +MV G P +F+ LISAL + ++E
Sbjct: 302 -----VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/577 (22%), Positives = 224/577 (38%), Gaps = 94/577 (16%)
Query: 29 VGEAFQSLKRLCREGRIPE-------------------AEQMLEVMKCKGLFLDERTYSS 69
V EA Q L RL + +P+ + + L + +G +++S
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 70 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AER 128
V+ + C L ++ A ++ M G P V++YNSL+ +CR + A +L ++ A
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 129 GL--SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
G PD+ S+N + + F + K P+ TYS+ ++ C L
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
A F M R +SP+ +T+T L++ C G+ A L+ EM S
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR--------VRMSLN 232
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWL- 304
+VTY ALI G C ++ A E+ M E + P+++ Y+T+I G + D A+ +L
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 305 ---------DEDTYDSLMDSLS-----------YED-----------TYSSVMNDYLAEG 333
D Y ++ L ED ++++MN Y G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
M+ A+ + H + G+ VA S +I+G+ K + EA ++Y + + +
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA---IVYFC----IEKANDVM 405
Query: 394 YDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 452
Y +L++ C +F + L S L D MY
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF----------------------MYTS 443
Query: 453 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSC 512
I C+ N+ A+ + MV G + + LI L + E V + L S
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSG 503
Query: 513 NLSDSEQLKVLSEINVTKSEIYALLDVLAEMAMDSLL 549
DS +L + + A D+L +M L+
Sbjct: 504 ISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 145/346 (41%), Gaps = 44/346 (12%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ G + A + + M+ + L+ TY+++I FC ++ A + S M+ P+
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNS 268
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+ Y +++ + +R D A+ L M +G+ D+ +Y +IS C
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPD---------------- 203
+ PD ++++M A R+ A +++ +++ G PD
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 204 --------------ELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 249
++ YT L++A C G+F + L ++ G +PD
Sbjct: 389 LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD--------KFM 440
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTY 309
Y + I GLC + +A ++ M + GL D + Y+T+I GL K + +
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA----SKGLMVEARQVF 496
Query: 310 DSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 353
D +++S D+ + ++ Y EGNM A L DM R G +++
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA 542
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 21/289 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ GRI +AE + M G D TY+ ++ ++ + N + A +++EM+ G
Sbjct: 230 FCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Query: 99 VVTYNSLVFAYCRRDSVDKAVG-ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+YN L+ +CR DK +++ M RG DV SY+ +I FC
Sbjct: 290 AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLF 348
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
KG+ + TY+SL++A E S A L +M G+SPD + YT +L+ C
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G KA+ + ++MI PD ++YN+LI GLC RV EA+++ M
Sbjct: 409 GNVDKAYGVFNDMIEHEITPD--------AISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 278 LSPDAVCYSTVISGL---KIETEDKAIW--------WLDEDTYDSLMDS 315
PD + + +I GL K + +W LD D D+L+ +
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 34 QSLKRLCREGRIPEAEQ-MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 92
Q LKR CR + M++ M+ +G F D +YS++I FC + A+ L EM
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
KG +VVTY SL+ A+ R + A +L M E GLSPD Y ++ C
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++ I PDA +Y+SL+ LC R++EA LF +M PDELT+ ++
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPD 238
+ + A+ + D+M+ KGF D
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 196/497 (39%), Gaps = 68/497 (13%)
Query: 32 AFQS-LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
A++S + L + G I A Q+ + M+ + Y+ IG ++ + A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
GFS TY+ + C+ D +L M G PD+ ++N + C
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
V +G PD +Y+ L+ L ++++A +++ M+R GVSPD L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
+ C + A+ + E I + + V YNALI G C R+E+A +
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARV-------KLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 271 RGMPEMGLSPDAVCYSTVIS------------GLKIETEDKAIWWLDEDTYDSLMDS--- 315
M ++G PD V Y+ +++ G+ E I LD +Y+ L+
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ-LDAYSYNQLLKRHCR 302
Query: 316 LSYED-------------------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
+S+ D +YS+++ + N ++A +L +M + G + + V
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKD 415
Y+ LI ++ + AK+ L + G P Y +L++ C + + D
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGL--SPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 416 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 475
+++ DA + YN LI CRS V +A ++ +M
Sbjct: 421 MIEHEITPDAIS----------------------YNSLISGLCRSGRVTEAIKLFEDMKG 458
Query: 476 YGHAPHMFSVLALISAL 492
P + +I L
Sbjct: 459 KECCPDELTFKFIIGGL 475
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSES-----KKVG-----EAFQSLKRLCREGR-IPEAE 49
+ L+ +YN +I GF A +E+ K+G + L + + AE
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT-LLSEMIAKGFSPSVVTYNSLVFA 108
++ M G+ LD +Y+ ++ C ++ D + ++ EM +GF VV+Y++L+
Sbjct: 276 GVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIET 334
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
+CR + KA + M ++G+ +V +Y +I F + G+ PD
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
Y+++++ LC + +A+ +F +M+ ++PD ++Y L++ C G T+A L +
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV 288
+M K PD +T+ +I GL ++ A ++ M + G + D T+
Sbjct: 455 DMKGKECCPD--------ELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTL 506
Query: 289 ISG 291
I
Sbjct: 507 IKA 509
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/598 (21%), Positives = 240/598 (40%), Gaps = 113/598 (18%)
Query: 38 RLCREGRIPEAEQ----MLEVMKCKG---------LFLDERTYSSVIGWFCN-------L 77
+LCR G P +L+ + CKG + ER + I CN +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI-VSCNKVLKGLSV 264
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
++I+ A LLS ++ G +P+VVT+ +L+ +C+R +D+A + + M +RG+ PD+ +Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 138 NRVISKFCXXXXXXXXXXXXXXXVDK---------------------------------- 163
+ +I + + K
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 164 -GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
GI P+ TY+ L++ LC + R+ EAF ++ ++L+ G+ P +TY+ L++ C G
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 223 AFHLHDEMIHKGFLPD------FVTGFSPA---------------------IVTYNALIH 255
F L+++MI G+ PD V G S +V +N+LI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDS 315
G C L+R +EAL++ R M G+ PD ++TV +++ + A + T +
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV---MRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 316 LSYEDTYSS-------VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
L + S+ V++ ++ A + +++ V Y+ +I G
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 369 RTREAKR--DLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDA 425
R EA+R +LL + G P+ IL+ C N++ + + + + +A
Sbjct: 622 RLDEAERIFELLKVTPFG----PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 426 ATAHTTMLHLKNKTDGENK-------TDGGM------YNLLIFEHCRSHNVHKAYNMYME 472
T M D E + G+ Y+++I C+ V +A N++ +
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 473 MVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTK 530
+ P + + LI E + + + LR+ D + LSE N K
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPK 795
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 163/376 (43%), Gaps = 28/376 (7%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K LC++GRI EA M + +G+ TYSS+I FC + S L +MI G+
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P VV Y LV ++ + A+ M + + +V +N +I +C
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 156 XXXXXVDKGIFPDAATYSSLM------EALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
GI PD AT++++M +A C + + LF M R +S D
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD------ 571
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG-FSPAIVTYNALIHGLCFLDRVEEALE 268
+ C +V F H F + + G P IVTYN +I G C L R++EA
Sbjct: 572 -IAVCNVVIHLL--FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628
Query: 269 ILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLM---DSLSYEDTYSS 324
I + P+ V + +I L K D AI S+M S TY
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF------SIMAEKGSKPNAVTYGC 682
Query: 325 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 384
+M+ + +++ + +L +M G S V+YS++I+GL K+ R EA ++ + A D
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT-NIFHQAIDA 741
Query: 385 FLSMPSYTVYDILLEN 400
L +P Y IL+
Sbjct: 742 KL-LPDVVAYAILIRG 756
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 168/430 (39%), Gaps = 86/430 (20%)
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
CR VDKA+ I + G+ + P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGV----------------------------------VIPQD 182
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT-YTRLLNACCLVGEFTKAFHLHD 228
+ Y ++ +L R+ D F ++ RGG+ P ++ + +L+A GE TKA H
Sbjct: 183 SVY-RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR 241
Query: 229 EMIHKGFLPDFVT--------------------------GFSPAIVTYNALIHGLCFLDR 262
++ +GF V+ G +P +VT+ LI+G C
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED-- 320
++ A ++ + M + G+ PD + YST+I G + + + + D
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGY----FKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 380
+SS ++ Y+ G++ A + M G + V Y++LI GL + R EA I
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 381 ASDGFLSMPSYTVYDILLE---NCSN--SEFKSLVELVK-----DYSMRDLSDDAATAHT 430
G PS Y L++ C N S F +++K D + + D +
Sbjct: 418 LKRGM--EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 431 TMLH---LKNKTDGEN-KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM--FS 484
MLH K G++ + + ++N LI CR + +A ++ M YG P + F+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 485 VLALISALDD 494
+ +S ++D
Sbjct: 536 TVMRVSIMED 545
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 147/347 (42%), Gaps = 49/347 (14%)
Query: 81 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 140
D+ + +M+ G ++ YN LV A + +KA +L M E+G+ PD+ +YN +
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 141 ISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 200
IS +C G+ P+ TY+S + E R+ EA LFRE ++ V
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDV 303
Query: 201 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 260
+ + +TYT L++ C + + +A L + M + GFSP +VTYN+++ LC
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESR--------GFSPGVVTYNSILRKLCED 355
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED 320
R+ EA +L M + PD + +T+I
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLI------------------------------- 384
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 380
N Y +M A+++ M G +Y LI+G K AK +L +
Sbjct: 385 ------NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSM 438
Query: 381 ASDGFLSMPSYTVYDILLENCSNSEFK-SLVELVKDYSMRDLSDDAA 426
GF P Y Y L++ N + + +L++++ R L D A
Sbjct: 439 IEKGF--SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 10/262 (3%)
Query: 32 AFQSLKRLCREGRIPE-AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM 90
+ L C + PE AE++L M+ KG+F D TY+++I +C + A ++ M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
G +P++VTYNS + + R + +A + R + + + V +Y +I +C
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDI 323
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
+G P TY+S++ LC + R+ EA L EM + PD +T L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
+NA C + + A + +MI G D + +Y ALIHG C + +E A E L
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLD--------MYSYKALIHGFCKVLELENAKEEL 435
Query: 271 RGMPEMGLSPDAVCYSTVISGL 292
M E G SP YS ++ G
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGF 457
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 20/255 (7%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR---------------LCREGRI 45
+A N+ YN I GF+ + ++ F+ +K CR I
Sbjct: 269 VAPNIVTYNSFIHGFS-----REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 46 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 105
EA ++ EVM+ +G TY+S++ C +I A+ LL+EM K P +T N+L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 106 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 165
+ AYC+ + + AV + + M E GL D+ SY +I FC ++KG
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
P ATYS L++ + + E L E + G+ D Y L+ C + + A
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKV 503
Query: 226 LHDEMIHKGFLPDFV 240
L + M KG + D V
Sbjct: 504 LFESMEKKGLVGDSV 518
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 9/257 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K LC++ I A ++L+ + GL + TY++++G + ++SA +L EM+ +G+
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P TY L+ YC+ +A ++ M + + P+ +Y +I C
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+++ PD++ +++ALC + ++ EA L+R+ML+ PD + L++ C
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G T+A L DE F G P+++TYN LI G+C + EA + M E
Sbjct: 378 KEGRVTEARKLFDE---------FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 276 MGLSPDAVCYSTVISGL 292
P+A Y+ +I GL
Sbjct: 429 RKCKPNAFTYNVLIEGL 445
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 20/339 (5%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAK-GFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
R+ ++++ + D H + G +P++ T N LV A C+++ ++ A +L
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+ GL P++ +Y ++ + +D+G +PDA TY+ LM+ C
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
R SEA + +M + + P+E+TY ++ A C + +A ++ DEM+ + F+PD
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE---TEDKA 300
+I LC +V+EA + R M + PD ST+I L E TE +
Sbjct: 336 K--------VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 301 IWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 360
++ DE S+ L TY++++ +G + A +L DM + Y+VL
Sbjct: 388 LF--DEFEKGSIPSLL----TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 361 INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
I GL K +E R L + G P+ T + IL E
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIG--CFPNKTTFLILFE 478
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 154/332 (46%), Gaps = 17/332 (5%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
T + ++ C N I+SA+ +L E+ + G P++VTY +++ Y R ++ A +L M
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+RG PD +Y ++ +C I P+ TY ++ ALC E++
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
EA ++F EML PD ++++A C + +A L +M+ +PD
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD------- 365
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL--KIE-TEDKAIW 302
+ LIH LC RV EA ++ E G P + Y+T+I+G+ K E TE +W
Sbjct: 366 -NALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
+D Y+ ++ TY+ ++ GN++ +++ +M G + + +L
Sbjct: 424 ---DDMYERKCKPNAF--TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFE 478
Query: 363 GLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
GL K + +A + + +G + S+ ++
Sbjct: 479 GLQKLGKEEDAMKIVSMAVMNGKVDKESWELF 510
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 135/333 (40%), Gaps = 40/333 (12%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
GI P+ T + L++ALC + + A+ + E+ G+ P+ +TYT +L G+ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ +EM+ +G+ PD TY L+ G C L R EA ++ M + + P+ V
Sbjct: 246 KRVLEEMLDRGWYPD--------ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 284 CYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTY--SSVMNDYLAEGNMQRALQL 341
Y +I L E + + +D +++ D+ V++ + + A L
Sbjct: 298 TYGVMIRALCKEKKSGEA----RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN- 400
M ++ + S LI+ L K+ R EA R L G S+PS Y+ L+
Sbjct: 354 WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA-RKLFDEFEKG--SIPSLLTYNTLIAGM 410
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRS 460
C E L D R +A T YN+LI ++
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFT----------------------YNVLIEGLSKN 448
Query: 461 HNVHKAYNMYMEMVHYGHAPHMFSVLALISALD 493
NV + + EM+ G P+ + L L L
Sbjct: 449 GNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+EGR+ EA ++ + + KG TY+++I C ++ A L +M + P+
Sbjct: 376 LCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
TYN L+ + +V + V +L M E G P+ ++
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 217/513 (42%), Gaps = 50/513 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG--FS 96
C+ + EA ++ + M+ D TY+++I C K+ AH +LS M+ K
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P+VV+Y +LV YC + +D+AV + M RGL P+ +YN +I
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 157 XXXXVD--KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
D PDA T++ L++A C L A +F+EML + PD +Y+ L+
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C+ EF +A L +E+ K L P YN + LC + ++A ++ R +
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLG-KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWWL-----------DEDTYDSLMDSLSYEDTYS 323
+ G+ D Y T+I+G E + K + L D +TY+ L+D L
Sbjct: 458 KRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL------L 510
Query: 324 SVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD 383
+ LA +QR L R YL + ++ L K+ E+ L+ + +
Sbjct: 511 KIGEALLAHDTLQRML-------RSSYLPVATTFHSVLAELAKRKFANES-FCLVTLMLE 562
Query: 384 GFLSMP---SYTVYDILLENCSNSEFKSLVELVKD----YSMRDL------SDDAATAHT 430
+ S V +L + + +V L+ D M +L + AHT
Sbjct: 563 KRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHT 622
Query: 431 TMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
+L K+ D N +I C+ +A+++Y E+V G+ + + L +
Sbjct: 623 LVLFCLEKS---QMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRN 679
Query: 491 ALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVL 523
AL+ + E+ +V + R L +S+ VL
Sbjct: 680 ALEAAGKWEELQFV---SKRMATLRESDDCSVL 709
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 179/434 (41%), Gaps = 60/434 (13%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKR----------------LCREGRIPEAEQM 51
+N +IR + A +S + FQ++K+ L + GR A +
Sbjct: 141 FNSLIRSYGNAGLFQES-----VKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 52 L-EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
E+ + G+ D T++++I FC + +D A + +M +P VVTYN+++ C
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 111 RRDSVDKAVGILRAMAERG--LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
R V A +L M ++ + P+V SY ++ +C + +G+ P+
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGG------VSPDELTYTRLLNACCLVGEFTK 222
A TY++L++ L R +D +++L GG +PD T+ L+ A C G
Sbjct: 316 AVTYNTLIKGLSEAHR----YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCF---LDRVEEAL------EILRGM 273
A + EM++ PD +Y+ LI LC DR E E+L G
Sbjct: 372 AMKVFQEMLNMKLHPD--------SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 274 PEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMD-SLSYEDTYSSVMNDYLAE 332
E P A Y+ + L + K E + LM + +Y +++ + E
Sbjct: 424 DE--CKPLAAAYNPMFEYLCANGKTKQA----EKVFRQLMKRGVQDPPSYKTLITGHCRE 477
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G + A +L M R ++ Y +LI+GL K A L + +L P T
Sbjct: 478 GKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL--PVAT 535
Query: 393 VYDILLENCSNSEF 406
+ +L + +F
Sbjct: 536 TFHSVLAELAKRKF 549
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 171/441 (38%), Gaps = 77/441 (17%)
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
L +R ++S+I + N + L M G SPSV+T+NSL+ I
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL-------------SI 182
Query: 122 LRAMAERGLSPDV-DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
L G++ D+ D R G+ PD+ T+++L+ C
Sbjct: 183 LLKRGRTGMAHDLFDEMRRTY----------------------GVTPDSYTFNTLINGFC 220
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
+ EAF +F++M +PD +TY +++ C G+ A ++ M+ K
Sbjct: 221 KNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA------ 274
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE---TE 297
T P +V+Y L+ G C ++EA+ + M GL P+AV Y+T+I GL E
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDE 334
Query: 298 DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 357
K I D + + T++ ++ + G++ A+++ +M +Y
Sbjct: 335 IKDILIGGNDAFTTFAPDAC---TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 358 SVLINGLHKKARTREAKRDLLYIASDGFL-----SMPSYTVYDILLEN-CSNSEFKSLVE 411
SVLI L + A+ + L P Y+ + E C+N + K +
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 412 LVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYM 471
+ + R + D + Y LI HCR AY + +
Sbjct: 452 VFRQLMKRGVQDPPS-----------------------YKTLITGHCREGKFKPAYELLV 488
Query: 472 EMVHYGHAPHMFSVLALISAL 492
M+ P + + LI L
Sbjct: 489 LMLRREFVPDLETYELLIDGL 509
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 8/256 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L +C G + A + + + GL D Y+++I +CNL + D A ++ G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PS+ T L+ A R S+ A + R M GL DV +YN ++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
GI PD ATY+ L+ ++ V + EA ++ E++R G P L +T ++
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+F +AF L M PD +VT +AL+HG C R+E+A+ + + +
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPD--------VVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 276 MGLSPDAVCYSTVISG 291
GL PD V Y+T+I G
Sbjct: 612 AGLKPDVVLYNTLIHG 627
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 21/262 (8%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 55
Y MI G+ G++D + G +S + R G I +AE + M
Sbjct: 411 YTTMIDGYCNL-GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
K +GL LD TY++++ + ++++ L+ EM + G SP V TYN L+ + R +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
D+A I+ + RG P ++ VI F D + PD T S+L
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ C QR+ +A LF ++L G+ PD + Y L++ C VG+ KA L M+ +G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 236 LPDFVTGFSPAIVTYNALIHGL 257
LP+ T++AL+ GL
Sbjct: 650 LPN--------ESTHHALVLGL 663
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 188/471 (39%), Gaps = 38/471 (8%)
Query: 30 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 89
G LK + R + A + +E M +G L+ S I +C+ D LL
Sbjct: 237 GVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMG 296
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
M G P +V + + C+ + +A +L + G+S D S + VI FC
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
+ P+ YSS + +C + A +F+E+ G+ PD + YT
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
+++ C +G KAF ++ +G P++ T LI + +A +
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLK--------SGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 270 LRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 328
R M GL D V Y+ ++ G K +K +DE + ++ TY+ +++
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA---TYNILIHS 522
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
+ G + A ++ ++ R G++ S +A++ +I G K+ +EA Y+A L M
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD---LRM 579
Query: 389 PSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGG 448
V CS L+ Y + A +L D K D
Sbjct: 580 KPDVV------TCS--------ALLHGYCKAQRMEKAIVLFNKLL------DAGLKPDVV 619
Query: 449 MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 499
+YN LI +C ++ KA + MV G P+ + AL+ L+ R N
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 177/417 (42%), Gaps = 20/417 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+++ C +G + ++L MK G+ D ++ I C + A ++L ++ G
Sbjct: 278 IRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGI 337
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
S V+ +S++ +C+ ++A+ ++ + L P++ Y+ +S C
Sbjct: 338 SQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ PD Y+++++ C R +AF F +L+ G P T T L+ AC
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G + A + M +G D +VTYN L+HG ++ + E++ M
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLD--------VVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 276 MGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDS-LSYEDTYSSVMNDYLAEG 333
G+SPD Y+ +I + + D+A + E + S L++ D V+ + G
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD----VIGGFSKRG 562
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
+ Q A L M+ V S L++G K R +A + G P +
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL--KPDVVL 620
Query: 394 YDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 449
Y+ L+ CS + + EL+ R + + +T H +L L+ K ++T M
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASM 677
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 44/351 (12%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
GIFP SL++ + L A + ML G + + + C G F K
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ L M H G PD IV + I LC ++EA +L + G+S D+V
Sbjct: 291 WELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 284 CYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRAL 339
S+VI G K+ ++AI L+ S YSS +++ + G+M RA
Sbjct: 343 SVSSVIDGFCKVGKPEEAI---------KLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
+ ++ G L V Y+ +I+G RT +A + + G + PS T IL+
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG--NPPSLTTSTILIG 451
Query: 400 NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCR 459
C S F S+ DA + M KT+G K D YN L+ + +
Sbjct: 452 AC--SRFGSI-------------SDAESVFRNM-----KTEGL-KLDVVTYNNLMHGYGK 490
Query: 460 SHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLR 510
+H ++K + + EM G +P + + LI ++ +E + +I+ +R
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 8/256 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L +C G + A + + + GL D Y+++I +CNL + D A ++ G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PS+ T L+ A R S+ A + R M GL DV +YN ++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
GI PD ATY+ L+ ++ V + EA ++ E++R G P L +T ++
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G+F +AF L M PD +VT +AL+HG C R+E+A+ + + +
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPD--------VVTCSALLHGYCKAQRMEKAIVLFNKLLD 611
Query: 276 MGLSPDAVCYSTVISG 291
GL PD V Y+T+I G
Sbjct: 612 AGLKPDVVLYNTLIHG 627
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 21/262 (8%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 55
Y MI G+ G++D + G +S + R G I +AE + M
Sbjct: 411 YTTMIDGYCNL-GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
K +GL LD TY++++ + ++++ L+ EM + G SP V TYN L+ + R +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
D+A I+ + RG P ++ VI F D + PD T S+L
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSAL 589
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ C QR+ +A LF ++L G+ PD + Y L++ C VG+ KA L M+ +G
Sbjct: 590 LHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Query: 236 LPDFVTGFSPAIVTYNALIHGL 257
LP+ T++AL+ GL
Sbjct: 650 LPN--------ESTHHALVLGL 663
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 188/471 (39%), Gaps = 38/471 (8%)
Query: 30 GEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 89
G LK + R + A + +E M +G L+ S I +C+ D LL
Sbjct: 237 GVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMG 296
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
M G P +V + + C+ + +A +L + G+S D S + VI FC
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
+ P+ YSS + +C + A +F+E+ G+ PD + YT
Sbjct: 357 PEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
+++ C +G KAF ++ +G P++ T LI + +A +
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLK--------SGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 270 LRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 328
R M GL D V Y+ ++ G K +K +DE + ++ TY+ +++
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA---TYNILIHS 522
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
+ G + A ++ ++ R G++ S +A++ +I G K+ +EA Y+A L M
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD---LRM 579
Query: 389 PSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGG 448
V CS L+ Y + A +L D K D
Sbjct: 580 KPDVV------TCS--------ALLHGYCKAQRMEKAIVLFNKLL------DAGLKPDVV 619
Query: 449 MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN 499
+YN LI +C ++ KA + MV G P+ + AL+ L+ R N
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 177/417 (42%), Gaps = 20/417 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+++ C +G + ++L MK G+ D ++ I C + A ++L ++ G
Sbjct: 278 IRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGI 337
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
S V+ +S++ +C+ ++A+ ++ + L P++ Y+ +S C
Sbjct: 338 SQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ PD Y+++++ C R +AF F +L+ G P T T L+ AC
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G + A + M +G D +VTYN L+HG ++ + E++ M
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLD--------VVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 276 MGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDS-LSYEDTYSSVMNDYLAEG 333
G+SPD Y+ +I + + D+A + E + S L++ D V+ + G
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTD----VIGGFSKRG 562
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
+ Q A L M+ V S L++G K R +A + G P +
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL--KPDVVL 620
Query: 394 YDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGM 449
Y+ L+ CS + + EL+ R + + +T H +L L+ K ++T M
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASM 677
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 44/351 (12%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
GIFP SL++ + L A + ML G + + + C G F K
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ L M H G PD IV + I LC ++EA +L + G+S D+V
Sbjct: 291 WELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 284 CYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRAL 339
S+VI G K+ ++AI L+ S YSS +++ + G+M RA
Sbjct: 343 SVSSVIDGFCKVGKPEEAI---------KLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
+ ++ G L V Y+ +I+G RT +A + + G + PS T IL+
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG--NPPSLTTSTILIG 451
Query: 400 NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCR 459
C S F S+ DA + M KT+G K D YN L+ + +
Sbjct: 452 AC--SRFGSI-------------SDAESVFRNM-----KTEGL-KLDVVTYNNLMHGYGK 490
Query: 460 SHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLR 510
+H ++K + + EM G +P + + LI ++ +E + +I+ +R
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 20/338 (5%)
Query: 43 GRIPEAEQMLEV---MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
G++ E++L V MK G+ TY+ ++ + +DSA + M + P +
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTYN+++ YC+ KA+ LR M RG D +Y +I
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KGI +S ++ LC E +L+E + +F M+R G P+ YT L++ G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
A L MI +GF PD +VTY+ +++GLC RVEEAL+ GL+
Sbjct: 378 VEDAIRLLHRMIDEGFKPD--------VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 280 PDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQ 336
+++ YS++I GL K D+A E ++ + + D+ Y+++++ + +
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEA-----ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 337 RALQLDHDM-SRDGYLSSYVAYSVLINGLHKKARTREA 373
A+ L M +G + Y++L++G+ K+ R EA
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 18/313 (5%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
Y S++ +D + SE+ F +V N+L+ ++ + V++ + + R M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
E G+ P + +YN +++ I PD TY+++++ C +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF-LPDFVTGFSP 245
+A + R+M G D++TY ++ AC +F L+ EM KG +P
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH------ 328
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWL 304
++ +I GLC ++ E + M G P+ Y+ +I G K + + AI L
Sbjct: 329 ---AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 305 DEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
++D D TYS V+N G ++ AL H DG + + YS LI+
Sbjct: 386 HR-----MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440
Query: 363 GLHKKARTREAKR 375
GL K R EA+R
Sbjct: 441 GLGKAGRVDEAER 453
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 144/344 (41%), Gaps = 13/344 (3%)
Query: 45 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
+ AE++ EVM+ + D TY+++I +C + A L +M +G +TY +
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 105 LVFAYCRRDS-VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
++ A C DS V + + M E+G+ +++ VI C + K
Sbjct: 298 MIQA-CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G P+ A Y+ L++ + +A L M+ G PD +TY+ ++N C G +A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
F G + + Y++LI GL RV+EA + M E G + D+
Sbjct: 417 LDY--------FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 284 CYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
CY+ +I K D+AI + D Y TY+ +++ E + AL+L
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY--TYTILLSGMFKEHRNEEALKLW 526
Query: 343 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 386
M G + + L GL + A + L +A G +
Sbjct: 527 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+EG++ E + E M KG + Y+ +I + ++ A LL MI +GF P
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY+ +V C+ V++A+ GL+ + Y+ +I
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-LRGGVSPDELTYTRLLNACCLV 217
+KG D+ Y++L++A +++ EA LF+ M G TYT LL+
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
+A L D MI K G +P + AL GLC +V A +IL + MG
Sbjct: 517 HRNEEALKLWDMMIDK--------GITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Query: 278 LSPDAVC 284
+ DA C
Sbjct: 569 VILDAAC 575
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 13/243 (5%)
Query: 4 NVNIYNGMIRGFATAAGKSDSES---KKVGEAFQS--------LKRLCREGRIPEAEQML 52
NV IY +I G+A + D+ + + E F+ + LC+ GR+ EA
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
+ GL ++ YSS+I ++D A L EM KG + YN+L+ A+ +
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 113 DSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
VD+A+ + + M E G V +Y ++S +DKGI P AA
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
+ +L LC+ +++ A + E+ GV D ++N C G +A L D +
Sbjct: 541 FRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGIT 599
Query: 232 HKG 234
+G
Sbjct: 600 ERG 602
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 15/381 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ L R ++ +A +L VM G D TY+ +IG C I +A LL +M G
Sbjct: 146 VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V+TYN+++ + ++A+ + + G P + +Y ++ C
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+G +PD TY+SL+ C L E + + +L G+ + +TY LL++ C
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
H + + + + + T + P ++TYN LI+GLC + A++ M E
Sbjct: 326 --------SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 276 MGLSPDAVCYSTVISGLKIE-TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
PD V Y+TV+ + E D AI L L TY+SV++ +G
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLI---TYNSVIDGLAKKGL 434
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
M++AL+L H M G + LI G + EA + L ++ G + + Y
Sbjct: 435 MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG--NGIRGSTY 492
Query: 395 DILLEN-CSNSEFKSLVELVK 414
++++ C E + +E+V+
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVE 513
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 159/366 (43%), Gaps = 16/366 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ LC++G I A +LE M G D TY++VI + + A + + G
Sbjct: 181 IGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGC 240
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P ++TY LV CR +A+ +L MA G PD+ +YN +++ C
Sbjct: 241 PPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVAS 300
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ + TY++L+ +LC + E ++ M + P +TY L+N C
Sbjct: 301 VIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLC 360
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
++A +M+ + LPD IVTYN ++ + V++A+E+L +
Sbjct: 361 KARLLSRAIDFFYQMLEQKCLPD--------IVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEG 333
P + Y++VI GL K + + Y ++D+ + D T S++ +
Sbjct: 413 TCCPPGLITYNSVIDGLA----KKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
++ A Q+ + S G Y ++I GL KK A + + + G P T+
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG--CKPDETI 526
Query: 394 YDILLE 399
Y +++
Sbjct: 527 YTAIVK 532
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
QMLE KC D TY++V+G +D A LL + P ++TYNS++
Sbjct: 374 QMLE-QKC---LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGL 429
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
++ + KA+ + M + G+ PD + +I FC ++G
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG 489
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
+TY +++ LC ++ + A ++ ML GG PDE YT ++
Sbjct: 490 STYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 142/347 (40%), Gaps = 42/347 (12%)
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D T + ++ LC +L++A L M R P + + L+ + + KA +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
M+ G +PD +TYN +I LC + AL +L M G PD + Y+T
Sbjct: 163 RVMVMSGGVPD--------TITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNT 214
Query: 288 VISGL-KIETEDKAI-WWLDEDTYDSLMDSLS-YEDTYSSVMNDYLAEGNMQRALQLDHD 344
VI + ++AI +W D+ L + + TY+ ++ RA+++ D
Sbjct: 215 VIRCMFDYGNAEQAIRFWKDQ-----LQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 404
M+ +G V Y+ L+N ++ E + +I S G L + + T +L CS+
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG-LELNTVTYNTLLHSLCSHE 328
Query: 405 EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVH 464
+ + E++ T YN+LI C++ +
Sbjct: 329 YWDEVEEILNIMYQTSYCPTVIT----------------------YNILINGLCKARLLS 366
Query: 465 KAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYN---EMSWVINNT 508
+A + + +M+ P + + ++ A+ + M + E+ ++ NT
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT 413
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 26/329 (7%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G+I +A ++ VMK +G+ + +TYS +I F L +A + +M+ +G P V+ Y
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
N+++ A+C ++D+A+ ++ M + P ++ +I +
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G P T++ L+ L ++++ +A ++ EM GVS +E TYT+++ VG+ K
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
AF + ++G D I TY AL+ C R++ AL + + M + ++
Sbjct: 678 AFEYFTRLQNEGLDVD--------IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 283 VCYSTVISGLKIETEDKAIWWLDEDTYDS--LMDSLSYED------TYSSVMNDYLAEGN 334
Y+ +I G W D +++ L+ + E TY+S ++ G+
Sbjct: 730 FVYNILIDG----------WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLING 363
M RA Q +M G + Y+ LI G
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/449 (19%), Positives = 196/449 (43%), Gaps = 41/449 (9%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEM--IAKGFSPSVVTYNS 104
EA + MK +G+ + TYS ++G F ++A E I K + S+ Y
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI--YGK 419
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
+++A+C+ ++++A ++R M E G+ + Y+ ++ + + G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
P TY L+ ++S+A ++ R M GV + TY+ ++N + ++ AF
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
+ ++M+ +G PD ++ YN +I C + ++ A++ ++ M ++ P
Sbjct: 540 AVFEDMVKEGMKPD--------VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 285 YSTVISGLKIETEDKAIWWLDEDTYDSLM--DSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
+ +I G + + + +D + + T++ ++N + + M++A+++
Sbjct: 592 FMPIIHGYAKSGDMRR----SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 343 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS 402
+M+ G ++ Y+ ++ G T +A + ++G L + +T +L C
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG-LDVDIFTYEALLKACCK 706
Query: 403 NSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHN 462
+ +S + + K+ S R++ ++ +YN+LI R +
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSF----------------------VYNILIDGWARRGD 744
Query: 463 VHKAYNMYMEMVHYGHAPHMFSVLALISA 491
V +A ++ +M G P + + + ISA
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + ++ +A ++L+ M G+ +E TY+ ++ + ++ A + + +G
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ TY +L+ A C+ + A+ + + M+ R + + YN +I +
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+G+ PD TY+S + A ++ A EM GV P+ TYT L+
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 219 EFTKAFHLHDEMIHKGFLPD 238
KA ++EM G PD
Sbjct: 814 LPEKALSCYEEMKAMGIKPD 833
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 17/214 (7%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
LK C+ GR+ A + + M + + + Y+ +I + + A L+ +M +G
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P + TY S + A + +++A + M G+ P++ +Y +I +
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAF------DLFREMLRGGVSPDELTYTR 209
GI PD A Y L+ +L ++EA+ + +EM+ G+ D T
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVH 880
Query: 210 LLNACCLV----GEFTKAFHLHDEMIHKGFLPDF 239
C + GE T E + K F PD+
Sbjct: 881 WSKCLCKIEASGGELT-------ETLQKTFPPDW 907
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 33/306 (10%)
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
PS + +V Y RR + +A M RG++P Y +I +
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
++GI TYS ++ A F E R + + Y +++ A C
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 217 VGEFTKAFHLHDEMIHKGF---------LPDFVT------------------GFSPAIVT 249
+A L EM +G + D T GF+P +VT
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTY 309
Y LI+ + ++ +ALE+ R M E G+ + YS +I+G ++ +D W +
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF-VKLKD---WANAFAVF 542
Query: 310 DSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
+ ++ D Y+++++ + GNM RA+Q +M + + + + +I+G K
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 368 ARTREA 373
R +
Sbjct: 603 GDMRRS 608
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 49/367 (13%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++R + +A ++L+ M GL DE + ++ C + A + +M K F
Sbjct: 174 MRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-F 232
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P++ + SL++ +CR + +A +L M E GL PD+ + ++S +
Sbjct: 233 PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD 292
Query: 156 XXXXXVDKGIFPDAATYSSLMEALC-VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+G P+ Y+ L++ALC E+R+ EA +F EM R G D +TYT L++
Sbjct: 293 LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF 352
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C G K + + D+M KG +P + VTY ++ ++ EE LE++ M
Sbjct: 353 CKWGMIDKGYSVLDDMRKKGVMP--------SQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 275 EMGLSPDAVCYSTVIS-GLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
G PD + Y+ VI K+ G
Sbjct: 405 RRGCHPDLLIYNVVIRLACKL--------------------------------------G 426
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
++ A++L ++M +G + ++ING + EA + S G S P Y
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGT 486
Query: 394 YDILLEN 400
LL N
Sbjct: 487 LKSLLNN 493
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 163/360 (45%), Gaps = 18/360 (5%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CREG++ EA+++L MK GL D +++++ + + K+ A+ L+++M +GF P+V
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 100 VTYNSLVFAYCRRDS-VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
Y L+ A CR + +D+A+ + M G D+ +Y +IS FC
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
KG+ P TY +M A +++ E +L +M R G PD L Y ++ C +G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
E +A L +EM G SP + T+ +I+G + EA + M G+
Sbjct: 427 EVKEAVRLWNEM--------EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL----AEGN 334
A Y T+ S L D + + +D + + + S + S ++ A+G+
Sbjct: 479 F-SAPQYGTLKSLLNNLVRDDKL-EMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGH 536
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHK---KARTREAKRDLLYIASDGFLSMPSY 391
++ A DM + Y+ L+ GL+K + E ++ +AS+ +S Y
Sbjct: 537 VKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMY 596
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 29/368 (7%)
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT---YNSLVFAYCRR 112
K G F S++ + + + L+ EM + +P ++ + L+ +
Sbjct: 123 KQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASA 180
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ V KAV +L M + GL PD + ++ C +K P+ +
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYF 239
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
+SL+ C E +L EA ++ +M G+ PD + +T LL+ G+ A+ L ++M
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK 299
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+GF P+ + Y LI LC + R++EA+ + M G D V Y+ +ISG
Sbjct: 300 RGFEPN--------VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 292 L-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
K DK LD+ +M S + TY +M + + + L+L M R G
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPS---QVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 351 LSSYVAYSVLINGLHKKARTREAKR-------DLLYIASDGFLSMPS-YTVYDILLENCS 402
+ Y+V+I K +EA R + L D F+ M + +T L+E C+
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 403 NSEFKSLV 410
+ FK +V
Sbjct: 469 H--FKEMV 474
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 4 NVNIYNGMIRGFATAAGKSDS-----ESKKVGEAFQS--------LKRLCR-EGRIPEAE 49
++ ++ ++ G+A A +D+ + +K G F+ ++ LCR E R+ EA
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG--FEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ M+ G D TY+++I FC ID +++L +M KG PS VTY ++ A+
Sbjct: 328 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
+++ ++ + ++ M RG PD+ YN VI C G+ P
Sbjct: 388 EKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGV 447
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGV--SPDELTYTRLLNACCLVGEFTKAFHLH 227
T+ ++ + L EA + F+EM+ G+ +P T LLN + A +
Sbjct: 448 DTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVW 507
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
+ +K + + + IH L V+EA M EM L P Y+
Sbjct: 508 SCISNK------TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 288 VISGL 292
++ GL
Sbjct: 562 LMKGL 566
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 161/386 (41%), Gaps = 47/386 (12%)
Query: 71 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 130
+ C ++ A TLL + I G P V+TYN+L+ Y R +D+A + R M E G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 131 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 190
PDV +YN +IS + G+ PD +Y++LM R EAF
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 191 LFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 249
+ E + G+ P TY LL+A C G A L + + P ++T
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR---------VKPELMT 190
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI----SGLKIETEDKAIWWLD 305
YN LI+GLC RV ++R + + G +P+AV Y+T++ +IE + +
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 306 EDTY-----------DSLMDSLSYED-------------------TYSSVMNDYLAEGNM 335
++ Y +L+ + E+ +Y++++N Y +GN+
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYD 395
L ++ G +++++NGL T A++ L I G PS +
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGM--QPSVVTCN 368
Query: 396 ILLEN-CSNSEFKSLVELVKDYSMRD 420
L++ C + L +RD
Sbjct: 369 CLIDGLCKAGHVDRAMRLFASMEVRD 394
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 27/393 (6%)
Query: 97 PSVVT--YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P + T N V + C+ ++++A +L G+ PDV +YN +I +
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+ GI PD TY+SL+ L+ LF EML G+SPD +Y L++
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
+G +AF + E IH + G P I TYN L+ LC + A+E+ + +
Sbjct: 129 FKLGRHGEAFKILHEDIH-------LAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN 334
+ P+ + Y+ +I+GL ++ W+ + S + TY++++ Y
Sbjct: 182 SR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV--TYTTMLKMYFKTKR 238
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
+++ LQL M ++GY A +++ L K R EA + + G S +
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 395 DILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTT----MLHLKNKTDGENK----TD 446
+L + ++ +L+++ M+ L D T HT +L++ N E +
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT-HTIIVNGLLNIGNTGGAEKHLACIGE 357
Query: 447 GGMY------NLLIFEHCRSHNVHKAYNMYMEM 473
GM N LI C++ +V +A ++ M
Sbjct: 358 MGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 27/283 (9%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+ G A ++ + +K + + + TY+ +I C ++ S ++ E+ G+
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P+ VTY +++ Y + ++K + + M + G + D + V+S
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 156 XXXXXVDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
V G D +Y++L+ + L DL E+ G+ PD+ T+T ++N
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 215 CLVGEFTKAFHLHDEMIHK-GFLPDFVT------GFSPA-----------------IVTY 250
+G T H I + G P VT G A TY
Sbjct: 340 LNIGN-TGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTY 398
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
+++H LC R+ A ++L G+ + V+SG++
Sbjct: 399 TSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIR 441
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 150/314 (47%), Gaps = 15/314 (4%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D +T++ +I C + K + A LL M G P +VTYN+L+ +C+ + ++KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 123 RAMAERGL-SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
+ + + SPDV +Y +IS +C + GI+P T++ L++
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+ A ++ +M+ G PD +T+T L++ C VG+ ++ F L +EM +G P+
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN--- 381
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKA 300
TY+ LI+ LC +R+ +A E+L + + P Y+ VI G K ++A
Sbjct: 382 -----AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 301 IWWLDE-DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
++E + D + T++ ++ + +G M A+ + H M G + S
Sbjct: 437 NVIVEEMEKKKCKPDKI----TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 360 LINGLHKKARTREA 373
L++ L K +EA
Sbjct: 493 LLSCLLKAGMAKEA 506
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 44/371 (11%)
Query: 37 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE------- 89
+ LC+ G A QM E MK G+ + R ++ F K+ A LL +
Sbjct: 111 RSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC 170
Query: 90 -MIAKGFSPSVV-------------------------TYNSLVFAYCRRDSVDKAVGILR 123
M+ ++V T+N L+ C +KA+ +L
Sbjct: 171 CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG 230
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVE 182
M+ G PD+ +YN +I FC + PD TY+S++ C
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
++ EA L +MLR G+ P +T+ L++ GE A + +MI G PD
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD---- 346
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIW 302
+VT+ +LI G C + +V + + M G+ P+A YS +I+ L E++ +
Sbjct: 347 ----VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC--NENRLLK 400
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
+ + D + Y+ V++ + G + A + +M + + +++LI
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 363 GLHKKARTREA 373
G K R EA
Sbjct: 461 GHCMKGRMFEA 471
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 22/251 (8%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKR-----------------LCREGRIPEAEQ 50
YN +I+GF + +E K E F+ +K C+ G++ EA
Sbjct: 244 YNTLIQGFCKS-----NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+L+ M G++ T++ ++ + ++ +A + +MI+ G P VVT+ SL+ YC
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R V + + M RG+ P+ +Y+ +I+ C K I P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
Y+ +++ C +++EA + EM + PD++T+T L+ C+ G +A + +M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 231 IHKGFLPDFVT 241
+ G PD +T
Sbjct: 479 VAIGCSPDKIT 489
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 170/434 (39%), Gaps = 61/434 (14%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
S TYN L + C+ D A + M G+SP+ ++S F
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ + +SL+ L R+ +A LF E LR D T+ L+ C V
Sbjct: 162 LQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVT------GF----------------------SPAIVT 249
G+ KA L M G PD VT GF SP +VT
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTY 309
Y ++I G C ++ EA +L M +G+ P V ++ ++ G E E+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE----MLTAEEIR 335
Query: 310 DSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
++ + D T++S+++ Y G + + +L +M+ G + YS+LIN L +
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 368 ARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAA 426
R +A+ L +AS + P +Y+ +++ C + +V++ + D
Sbjct: 396 NRLLKARELLGQLASKDIIPQP--FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 427 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 486
T + +LI HC + +A +++ +MV G +P +V
Sbjct: 454 T----------------------FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 487 ALISALDDDRMYNE 500
+L+S L M E
Sbjct: 492 SLLSCLLKAGMAKE 505
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+ G + AE++ M G F D T++S+I +C + ++ L EM A+G P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ L+ A C + + KA +L +A + + P YN VI FC
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
K PD T++ L+ C++ R+ EA +F +M+ G SPD++T + LL+ G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 221 TKAFHLHDEMIHKG 234
+A+HL +++ KG
Sbjct: 504 KEAYHL-NQIARKG 516
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC E R+ +A ++L + K + Y+ VI FC K++ A+ ++ EM K P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
+T+ L+ +C + + +AV I M G SPD + + ++S
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 150/314 (47%), Gaps = 15/314 (4%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D +T++ +I C + K + A LL M G P +VTYN+L+ +C+ + ++KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 123 RAMAERGL-SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
+ + + SPDV +Y +IS +C + GI+P T++ L++
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+ A ++ +M+ G PD +T+T L++ C VG+ ++ F L +EM +G P+
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN--- 381
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKA 300
TY+ LI+ LC +R+ +A E+L + + P Y+ VI G K ++A
Sbjct: 382 -----AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 301 IWWLDE-DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
++E + D + T++ ++ + +G M A+ + H M G + S
Sbjct: 437 NVIVEEMEKKKCKPDKI----TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 360 LINGLHKKARTREA 373
L++ L K +EA
Sbjct: 493 LLSCLLKAGMAKEA 506
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 44/371 (11%)
Query: 37 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE------- 89
+ LC+ G A QM E MK G+ + R ++ F K+ A LL +
Sbjct: 111 RSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGC 170
Query: 90 -MIAKGFSPSVV-------------------------TYNSLVFAYCRRDSVDKAVGILR 123
M+ ++V T+N L+ C +KA+ +L
Sbjct: 171 CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG 230
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVE 182
M+ G PD+ +YN +I FC + PD TY+S++ C
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
++ EA L +MLR G+ P +T+ L++ GE A + +MI G PD
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD---- 346
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIW 302
+VT+ +LI G C + +V + + M G+ P+A YS +I+ L E++ +
Sbjct: 347 ----VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC--NENRLLK 400
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
+ + D + Y+ V++ + G + A + +M + + +++LI
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 363 GLHKKARTREA 373
G K R EA
Sbjct: 461 GHCMKGRMFEA 471
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 22/251 (8%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKR-----------------LCREGRIPEAEQ 50
YN +I+GF + +E K E F+ +K C+ G++ EA
Sbjct: 244 YNTLIQGFCKS-----NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+L+ M G++ T++ ++ + ++ +A + +MI+ G P VVT+ SL+ YC
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R V + + M RG+ P+ +Y+ +I+ C K I P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
Y+ +++ C +++EA + EM + PD++T+T L+ C+ G +A + +M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 231 IHKGFLPDFVT 241
+ G PD +T
Sbjct: 479 VAIGCSPDKIT 489
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 170/434 (39%), Gaps = 61/434 (14%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
S TYN L + C+ D A + M G+SP+ ++S F
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ + +SL+ L R+ +A LF E LR D T+ L+ C V
Sbjct: 162 LQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVT------GF----------------------SPAIVT 249
G+ KA L M G PD VT GF SP +VT
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTY 309
Y ++I G C ++ EA +L M +G+ P V ++ ++ G E E+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE----MLTAEEIR 335
Query: 310 DSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
++ + D T++S+++ Y G + + +L +M+ G + YS+LIN L +
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 368 ARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAA 426
R +A+ L +AS + P +Y+ +++ C + +V++ + D
Sbjct: 396 NRLLKARELLGQLASKDIIPQP--FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 427 TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVL 486
T + +LI HC + +A +++ +MV G +P +V
Sbjct: 454 T----------------------FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 487 ALISALDDDRMYNE 500
+L+S L M E
Sbjct: 492 SLLSCLLKAGMAKE 505
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+ G + AE++ M G F D T++S+I +C + ++ L EM A+G P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ L+ A C + + KA +L +A + + P YN VI FC
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
K PD T++ L+ C++ R+ EA +F +M+ G SPD++T + LL+ G
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 221 TKAFHLHDEMIHKG 234
+A+HL +++ KG
Sbjct: 504 KEAYHL-NQIARKG 516
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC E R+ +A ++L + K + Y+ VI FC K++ A+ ++ EM K P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
+T+ L+ +C + + +AV I M G SPD + + ++S
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ LC G+ EA +ML + KG+ D Y++V L +I H L +M G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
SP + TYN L+ ++ R VD+A+ I + PD+ SYN +I+
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+KG+ PD TYS+LME +R+ A+ LF EML G P+ +TY LL+
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVT 241
G +A L+ +M +G PD +T
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 157/362 (43%), Gaps = 48/362 (13%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
+A Q+ E MK + DE TY+ +I + K D A L +EMI +G + +VV YN+L+
Sbjct: 253 KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLM 312
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX---XXXXXXXXVDK 163
+ VDKA+ + M E G P+ +Y+ +++ + +
Sbjct: 313 QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ 372
Query: 164 GI--------------------------FP---DAATYSSLMEALCVEQRLSEAFDLFRE 194
GI FP + +Y S++E+LC + EA ++ +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 195 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD--EMIHKGFLPDFVTGFSPAIVTYNA 252
+ GV D + Y + +A +G+ + H+HD E + K G SP I TYN
Sbjct: 433 IHEKGVVTDTMMYNTVFSA---LGKLKQISHIHDLFEKMKKD-------GPSPDIFTYNI 482
Query: 253 LIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDS 311
LI + V+EA+ I + PD + Y+++I+ L K D+A E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 312 LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTR 371
L + TYS++M + ++ A L +M G + V Y++L++ L K RT
Sbjct: 543 LNPDVV---TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTA 599
Query: 372 EA 373
EA
Sbjct: 600 EA 601
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 158/373 (42%), Gaps = 47/373 (12%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ + R G+ EA + M +GL L+ Y++++ +D A + S M+ G
Sbjct: 277 IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGC 336
Query: 96 SPSVVTYN---SLVFAYCRRDSVDKAVGI-------------LRAMAERG---------- 129
P+ TY+ +L+ A + +D V I +R +++ G
Sbjct: 337 RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFC 396
Query: 130 ------LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+ + DSY ++ C +KG+ D Y+++ AL +
Sbjct: 397 DMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLK 456
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
++S DLF +M + G SPD TY L+ + VGE +A ++ +E+ PD
Sbjct: 457 QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD----- 511
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIW 302
I++YN+LI+ L V+EA + M E GL+PD V YST++ K E + A
Sbjct: 512 ---IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV--- 359
+E ++ TY+ +++ G A+ L M + G + Y+V
Sbjct: 569 LFEEMLVKGCQPNIV---TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Query: 360 LINGLHKKARTRE 372
L + H K+R R
Sbjct: 626 LQSVSHGKSRIRR 638
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 170/413 (41%), Gaps = 48/413 (11%)
Query: 102 YNSLVFAYCRR---DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
YN ++ R D D+ IL +M + + ++ + N +I F
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFF----GNTEDLQMCL 191
Query: 159 XXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
V K + ++ TY L++A + S+AFD++ E+ RGG D Y LL+A +
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---L 248
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
+ KA + ++M + D TY +I + + + +EA+ + M G
Sbjct: 249 AKDEKACQVFEDMKKRHCRRDE--------YTYTIMIRTMGRIGKCDEAVGLFNEMITEG 300
Query: 278 LSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDS--LSYEDTYSSVMNDYLAEGN 334
L+ + V Y+T++ L K + DKAI + ++++ E TYS ++N +AEG
Sbjct: 301 LTLNVVGYNTLMQVLAKGKMVDKAI-----QVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
+ R LD + + YS L+ L K EA R L+ F Y
Sbjct: 356 LVR---LDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHR--LFCDMWSFPVKGERDSY 410
Query: 395 DILLEN-CSNSEFKSLVELVKDYSMRDLSDDA--------------ATAHTTMLHLKNKT 439
+LE+ C + +E++ + + D +H L K K
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 440 DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
DG + D YN+LI R V +A N++ E+ P + S +LI+ L
Sbjct: 471 DGPS-PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 23/333 (6%)
Query: 46 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 105
P ++ M+ + +T++ V + + K D A L M G + ++N++
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167
Query: 106 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 165
+ C+ V+KA + RA+ R S D +YN +++ +C V++GI
Sbjct: 168 LDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
P+ TY+++++ ++ A++ F EM + D +TYT +++ + GE +A +
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ DEMI +G L P++ TYNA+I LC D VE A+ + M G P+ Y
Sbjct: 287 VFDEMIREGVL--------PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 286 STVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE------DTYSSVMNDYLAEGNMQRAL 339
+ +I GL E + LM + E TY+ ++ Y +++AL
Sbjct: 339 NVLIRGLFHAGEF--------SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 372
L M L + Y++LI+G+ + R+ +
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
I P T++ + E + +A LF M G D ++ +L+ C KA+
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
L + + FS VTYN +++G C + R +ALE+L+ M E G++P+
Sbjct: 182 ELFRALRGR---------FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 285 YSTVISGLKIETEDKAIW--WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
Y+T++ G + + W +L+ D +D + TY++V++ + G ++RA +
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV----TYTTVVHGFGVAGEIKRARNVF 288
Query: 343 HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCS 402
+M R+G L S Y+ +I L KK A + G+ P+ T Y++L+
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY--EPNVTTYNVLIRGLF 346
Query: 403 NS-EFKSLVELVK 414
++ EF EL++
Sbjct: 347 HAGEFSRGEELMQ 359
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
LK R G+I A + MK + +D TY++V+ F +I A + EMI +G
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PSV TYN+++ C++D+V+ AV + M RG P+V +YN +I
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
++G P+ TY+ ++ + +A LF +M G P+ TY L++
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 17/241 (7%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C R P+A ++L+ M +G+ + TY++++ F +I A EM + V
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VTY ++V + + +A + M G+ P V +YN +I C
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
V +G P+ TY+ L+ L S +L + M G P+ TY ++ E
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE---------ALEIL 270
KA L ++M LP+ + TYN LI G+ R E+ A EIL
Sbjct: 386 VEKALGLFEKMGSGDCLPN--------LDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 437
Query: 271 R 271
R
Sbjct: 438 R 438
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 197/479 (41%), Gaps = 60/479 (12%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
Y V+ C +I+ A +++ +M G P V Y++++ + + ++ KAV + M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
++ + + ++ +C + I D Y+ +AL ++
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
EA +LFREM G++PD + YT L+ CCL G+ + AF L EM TG +P
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDG--------TGKTP 464
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWL 304
IV YN L GL +EA E L+ M G+ P V ++ VI GL E DKA
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA---- 520
Query: 305 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM----QRALQLDHDMSRDGYLSSYVA---- 356
E Y+SL D +S++ + A G + +R ++L+ + + Y + + +
Sbjct: 521 -EAFYESLEHKSREND--ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAE 577
Query: 357 -------------------------YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
Y LI + R+A+ + + + P
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV--PDL 635
Query: 392 TVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENK------ 444
Y I++ C +E K L +D RD+ D T ++ +L+ + D + +
Sbjct: 636 FTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT-YSVLLNSDPELDMKREMEAFDV 694
Query: 445 -TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMS 502
D Y ++I +C +++ K Y ++ +M P + + L+ + + EM
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMK 753
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 199/504 (39%), Gaps = 80/504 (15%)
Query: 32 AFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
AF +L +L G++ EA ++ M KG+ D Y+++IG C K A L+ EM
Sbjct: 402 AFDALGKL---GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
G +P +V YN L +A L+ M RG+ P ++N VI
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 152 XXXXXXXXXVDKGIFPDAA----------------------------TYSSLMEALCVEQ 183
K DA+ Y +L +LC E+
Sbjct: 519 KAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEK 578
Query: 184 R-LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+S+A DL M + GV P++ Y +L+ A C V KA + ++ K +PD
Sbjct: 579 DYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD---- 634
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG---LKIETEDK 299
+ TY +I+ C L+ ++A + M + PD V YS +++ L ++ E +
Sbjct: 635 ----LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREME 690
Query: 300 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
A +D + D + Y+ ++N Y ++++ L DM R + V Y+V
Sbjct: 691 A--------FDVIPDVV----YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV 738
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE-NCSNSEFKSLVELVKDYSM 418
L+ ++ +RE K F P Y +L++ C + + + D +
Sbjct: 739 LLKNKPERNLSREMK---------AFDVKPDVFYYTVLIDWQCKIGDLGE-AKRIFDQMI 788
Query: 419 RDLSDDAATAHTTML-------HLKNKT-------DGENKTDGGMYNLLIFEHCRSHNVH 464
D A +T ++ +LK + K D Y LI CR+ V
Sbjct: 789 ESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVL 848
Query: 465 KAYNMYMEMVHYGHAPHMFSVLAL 488
KA + EM+ G P S+ A+
Sbjct: 849 KAVKLVKEMLEKGIKPTKASLSAV 872
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 188/478 (39%), Gaps = 47/478 (9%)
Query: 45 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
IP+A + M K ++ SS++ +C + A+ L E S V YN
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
A + V++A+ + R M +G++PDV +Y +I C G
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
PD Y+ L L EAF+ + M GV P +T+ ++ GE KA
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 225 HLHDEMIHKGFLPD--FVTGFSPAIV------------------TYNALIHGLCF-LDRV 263
++ + HK D V GF A Y L LC D +
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTY 322
+A ++L M ++G+ P+ Y +I ++ KA + + ++ L TY
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF---TY 638
Query: 323 SSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIAS 382
+ ++N Y ++A L DM R V YSVL+N + RE
Sbjct: 639 TIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREM--------- 689
Query: 383 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 441
+ F +P Y I++ C ++ K + L KD R++ D T +T +L KNK +
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT-YTVLL--KNKPER 746
Query: 442 ---------ENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
+ K D Y +LI C+ ++ +A ++ +M+ G P ALI+
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 168/426 (39%), Gaps = 48/426 (11%)
Query: 4 NVNIYNGMIRGFATAAGKSDS-------ESKKVGEAFQS----LKRLCREGRIPEAEQML 52
++ IYN + G AT ++ E++ V + + ++ L G + +AE
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC-R 111
E ++ K D +S++ FC +D A I F Y +L + C
Sbjct: 525 ESLEHKSREND----ASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAE 577
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+D + KA +L M + G+ P+ Y ++I +C V K I PD T
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
Y+ ++ C +A+ LF +M R V PD +TY+ LLN+ + EM
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREME 690
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+PD +V Y +I+ C L+ +++ + + M + PD V Y+ ++
Sbjct: 691 AFDVIPD--------VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 292 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE-GNMQRALQLDHDMSRDGY 350
+ + D + + Y +V+ D+ + G++ A ++ M G
Sbjct: 743 KPERNLSREMKAFD----------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGV 792
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK-SL 409
Y+ LI K +EAK + G P Y L+ C + F
Sbjct: 793 DPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGV--KPDVVPYTALIAGCCRNGFVLKA 850
Query: 410 VELVKD 415
V+LVK+
Sbjct: 851 VKLVKE 856
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 133/362 (36%), Gaps = 36/362 (9%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMI-----AKGFS------------PSVV----TYN 103
+ Y++VI C T L E++ +GFS S+V
Sbjct: 91 QAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVST 150
Query: 104 SLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
+LV AY D D+A+ I RA G +PD+ + N +IS+
Sbjct: 151 ALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIER 210
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G+ DA TY +++AL E L +L + Y + CL
Sbjct: 211 LGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A+ L + L D S + Y ++ GLC+ R+E+A ++ M + G+ PD
Sbjct: 271 AYFLLQPLRDANILVDK----SDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 283 VCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRAL 339
YS +I G + KA+ D ++ ++ + SS++ Y GN A
Sbjct: 327 YVYSAIIEGHRKNMNIPKAV-----DVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
L + V Y+V + L K + EA + G P Y L+
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI--APDVINYTTLIG 439
Query: 400 NC 401
C
Sbjct: 440 GC 441
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 165/389 (42%), Gaps = 69/389 (17%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE--------- 89
LC G EA Q L M G+ D +Y+++I FC + A L+ E
Sbjct: 171 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITH 230
Query: 90 -------------------MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 130
M+ GF P VVT++S++ C+ V + +LR M E +
Sbjct: 231 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 131 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 190
P+ +Y ++ V +GI D Y+ LM+ L L EA
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 191 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 250
F+ +L P+ +TYT L++ C G+ + A + +M+ K +P+ +VTY
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN--------VVTY 402
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAI-------- 301
+++I+G +EEA+ +LR M + + P+ Y TVI GL K E+ AI
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 302 WWLDEDTY--DSLMDSLSY----------------------EDTYSSVMNDYLAEGNMQR 337
++E+ Y D+L++ L + Y+S+++ + G+ +
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
AL +M G V+Y+VLI+G+ K
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 176/423 (41%), Gaps = 118/423 (27%)
Query: 33 FQSLKRL---CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKI--DSAHTLL 87
F +L RL C R+ A + L M G+ D R ++S+I F N+N + D +
Sbjct: 61 FHTLFRLYLSCE--RLYGAARTLSAMCTFGVVPDSRLWNSLIHQF-NVNGLVHDQVSLIY 117
Query: 88 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 147
S+MIA G SP V N L+ ++C+ + A+ +LR NRVIS
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR--------------NRVIS----- 158
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
D TY++++ LC EA+ EM++ G+ PD ++Y
Sbjct: 159 -------------------IDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199
Query: 208 TRLLNACCLVGEFTKAFHLHDEM--------------------IHKGFLPDFVTGFSPAI 247
L++ C VG F +A L DE+ I + + ++GF P +
Sbjct: 200 NTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDV 259
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDED 307
VT++++I+ LC +V E +LR M EM + P+ V Y+T
Sbjct: 260 VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT-------------------- 299
Query: 308 TYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
L+DSL + Y + AL L M G V Y+VL++GL K
Sbjct: 300 ----LVDSLFKANIY-------------RHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 368 ARTREAKRDLLYIASDGFLSMPSYTVYDILLE------NCSNSEF-------KSLVELVK 414
REA++ + D +P+ Y L++ + S++EF KS++ V
Sbjct: 343 GDLREAEKTFKMLLEDN--QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 415 DYS 417
YS
Sbjct: 401 TYS 403
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 162/365 (44%), Gaps = 43/365 (11%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ GR+ A + +++ + + +D TY++VI C D A+ LSEM+ G P
Sbjct: 139 FCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195
Query: 99 VVTYNSLVFAYCRRDSVDKAVGIL----------------------------RAMAERGL 130
V+YN+L+ +C+ + +A ++ R M G
Sbjct: 196 TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 131 SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFD 190
PDV +++ +I++ C + ++P+ TY++L+++L A
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 191 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 250
L+ +M+ G+ D + YT L++ G+ +A E K L D P +VTY
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA-----EKTFKMLLED---NQVPNVVTY 367
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTY 309
AL+ GLC + A I+ M E + P+ V YS++I+G +K ++A+ L +
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 310 DSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
+++ + TY +V++ G + A++L +M G + L+N L + R
Sbjct: 428 QNVVPN---GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 370 TREAK 374
+E K
Sbjct: 485 IKEVK 489
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 9/265 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC G++ EA +L M + + TY + + D+ +++ G S
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS 677
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
YN+L+ C+ KA ++ M RG PD ++N ++ +
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 737
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
++ GI P+ ATY++++ L + E EM G+ PD+ TY L++ +G
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ ++ EMI G +P TYN LI + ++ +A E+L+ M + G+
Sbjct: 798 NMKGSMTIYCEMIADGLVPK--------TSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 279 SPDAVCYSTVISGL-KIETEDKAIW 302
SP+ Y T+ISGL K+ T W
Sbjct: 850 SPNTSTYCTMISGLCKLCTHPDVEW 874
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 156/382 (40%), Gaps = 55/382 (14%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ L R GRI E + +++ M KG+ LD+ Y+S+I F ++A EM +G
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR---------------- 139
VV+YN L+ + V A + M E+G+ PD+ ++N
Sbjct: 536 PWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 140 -------------------VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
V+ C + I P+ TY ++
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
+R F +L G+ Y L+ C +G KA + +M +GF+PD
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD-- 712
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK----IET 296
VT+N+L+HG V +AL M E G+SP+ Y+T+I GL I+
Sbjct: 713 ------TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKE 766
Query: 297 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
DK WL E + + TY+++++ GNM+ ++ + +M DG +
Sbjct: 767 VDK---WLSEMKSRGMRPD---DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST 820
Query: 357 YSVLINGLHKKARTREAKRDLL 378
Y+VLI+ + +A R+LL
Sbjct: 821 YNVLISEFANVGKMLQA-RELL 841
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 208/516 (40%), Gaps = 57/516 (11%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ RLC+ G++ E +L M+ ++ + TY++++ N A L S+M+ +G
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+V Y L+ + + +A + + E P+V +Y ++ C
Sbjct: 326 PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF 385
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
++K + P+ TYSS++ + L EA L R+M V P+ TY +++
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 216 LVGEFTKAFHLHDEMIH--------------------------KGFLPDFVT-GFSPAIV 248
G+ A L EM KG + D V+ G + +
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 505
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDT 308
Y +LI E AL M E G+ D V Y+ +ISG+ + A W
Sbjct: 506 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW-----A 560
Query: 309 YDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
Y + + D T++ +MN +G+ + L+L M G S ++ ++++ L +
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 367 KARTREAKRDLLYIASDGFLS--MPSYTVYDILLENCSNSE-----FKSLVELVKDYSMR 419
+ EA ++I + L P+ T Y I L+ S + FK+ E + Y ++
Sbjct: 621 NGKMEEA----IHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH-ETLLSYGIK 675
Query: 420 DLSDDAATAHTTM--LHLKNKT-----DGENK---TDGGMYNLLIFEHCRSHNVHKAYNM 469
T T+ L + K D E + D +N L+ + +V KA +
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST 735
Query: 470 YMEMVHYGHAPHMFSVLALISALDDDRMYNEM-SWV 504
Y M+ G +P++ + +I L D + E+ W+
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/518 (20%), Positives = 198/518 (38%), Gaps = 96/518 (18%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + G + EAE+ +++ + TY++++ C + SA ++++M+ K P+
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTY+S++ Y ++ +++AV +LR M ++ + P+ +Y VI
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
G+ + +L+ L R+ E L ++M+ GV+ D++ YT L++ G
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Query: 219 E--------------------------------FTK--AFHLHDEMIHKGFLPDFVT--- 241
+ F K A + M KG PD T
Sbjct: 519 DEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNI 578
Query: 242 ------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G P++++ N ++ LC ++EEA+ IL M M
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 278 LSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY-----EDTYSSVMNDYLAE 332
+ P+ Y + AI+ T+++L LSY Y++++
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIF----KTHETL---LSYGIKLSRQVYNTLIATLCKL 691
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G ++A + DM G++ V ++ L++G + R+A + G P+
Sbjct: 692 GMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI--SPNVA 749
Query: 393 VYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 452
Y+ ++ R LSD + K+ G + D YN
Sbjct: 750 TYNTII--------------------RGLSDAGLIKEVDKWLSEMKSRGM-RPDDFTYNA 788
Query: 453 LIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALIS 490
LI + N+ + +Y EM+ G P + LIS
Sbjct: 789 LISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS 826
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 63
NV YN +IRG + A G I E ++ L MK +G+ D
Sbjct: 747 NVATYNTIIRGLSDA------------------------GLIKEVDKWLSEMKSRGMRPD 782
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
+ TY+++I + + + T+ EMIA G P TYN L+ + + +A +L+
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 124 AMAERGLSPDVDSYNRVISKFC 145
M +RG+SP+ +Y +IS C
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLC 864
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 172/399 (43%), Gaps = 31/399 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDER------TYSSVIGWFCNLNKIDSAHTLLSEMIA 92
LC+ GR+ EAE++L MK L+ER TY+ +I +C K+++A ++S M
Sbjct: 380 LCKVGRLKEAEELLVRMK-----LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
P+VVT N++V CR ++ AV M + G+ +V +Y +I C
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++ G PDA Y +L+ LC +R +A + ++ GG S D L Y L+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
C K + + +M +G PD +TYN LI E ++
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDS--------ITYNTLISFFGKHKDFESVERMMEQ 606
Query: 273 MPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 331
M E GL P Y VI + D+A+ + S ++ + Y+ ++N +
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV--IYNILINAFSK 664
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM--- 388
GN +AL L +M + Y+ L L++K + + L D +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG-----ETLLKLMDEMVEQSCE 719
Query: 389 PSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAA 426
P+ +IL+E S S E L + ++ YS+ ++ A+
Sbjct: 720 PNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKAS 758
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 185/461 (40%), Gaps = 64/461 (13%)
Query: 71 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 130
I C + ++A +LS+++ +N+L+ R + + ++ M E +
Sbjct: 266 ISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 131 SPDVDSYNRVISKFCXXXXXXXX----XXXXXXXVDKG--IFPDAATYSSLMEALCVEQR 184
PDV + +I+ C D G I D+ +++L++ LC R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 185 LSEAFDLFREM-LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-- 241
L EA +L M L +P+ +TY L++ C G+ A + M P+ VT
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 242 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
G +VTY LIH C + VE+A+ M E
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLAEGN 334
G SPDA Y +ISGL ++ + AI +++ +D L+ Y+ ++ + + N
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA----YNMLIGLFCDKNN 561
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
++ ++ DM ++G + Y+ LI+ K +R + + DG P+ T Y
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL--DPTVTTY 619
Query: 395 DILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 453
+++ CS E ++L KD + H+ + + +YN+L
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGL----------HSKV-----------NPNTVIYNIL 658
Query: 454 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 494
I + N +A ++ EM P++ + AL L++
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 168/422 (39%), Gaps = 44/422 (10%)
Query: 80 IDSAHTLLSEMIAKG--FSPSVVTYNSLVFAYC--RRDSVDKAVGILRAMAERGLSPDVD 135
+D A +L EM+ K F P+ +T + ++ R + +K + ++ + G+SP+
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
R IS C + +A +++L+ L +S DL +M
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
+ PD +T L+N C +A + ++M +G D + +N LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLID 378
Query: 256 GLCFLDRVEEALEILRGMP-EMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYD 310
GLC + R++EA E+L M E +P+AV Y+ +I G K+ET + + + ED
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
+ T ++++ + A+ DM ++G + V Y LI+ +
Sbjct: 439 PNVV------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM--RDLSDDAATA 428
+A +Y Y+ +LE + + K L+ RD
Sbjct: 493 EKA----MYW-------------YEKMLEAGCSPDAKIYYALISGLCQVRRD-------- 527
Query: 429 HTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 488
H + ++ +G D YN+LI C +N K Y M +M G P + L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 489 IS 490
IS
Sbjct: 588 IS 589
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 207/514 (40%), Gaps = 93/514 (18%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ + +A + M+ +GL D+ +S ++ WFC +++ A M + +PS
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415
Query: 100 VTY----------------------------------NSLVFAYCRRDSVDKAVGILRAM 125
V N + +C++ VD A L+ M
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
++G+ P+V YN ++ C ++KG+ P+ TYS L++ +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI-----------HKG 234
A+D+ +M +E+ Y ++N C VG+ +KA + +I +
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 235 FLPDFV-----------------TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
+ FV G SP +VT+ +LI+G C +R++ ALE+ M M
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 278 LSPDAVCYSTVISGLKIETEDKAIWWLDEDTYD-SLMDSLSYEDTYSSVMNDYLAEGNMQ 336
L D Y +I G + + K + L + + LM ++S Y+S+++ + G M
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS---VYNSLISGFRNLGKMD 712
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 396
A+ L M DG Y+ +I+GL K A LY +P ++ +
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD--LYSELLDLGIVPDEILHMV 770
Query: 397 LLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
L+ S +F +++++ +D++ + +Y+ +I
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVL----------------------LYSTVIA 808
Query: 456 EHCRSHNVHKAYNMYMEMVHYG--HAPHMFSVLA 487
H R N+++A+ ++ EM+ G H +F++L
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 46/331 (13%)
Query: 39 LCREGRIPEAEQMLE-VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
LC+ G+ +A++ML+ ++K K + +Y+S+I F + DSA EM G SP
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSP 623
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+VVT+ SL+ +C+ + +D A+ + M L D+ +Y +I FC
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ G+ P+ + Y+SL+ ++ A DL+++M+ G+S D TYT +++
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G A L+ E++ G +PD + + L++GL + +A ++L M +
Sbjct: 744 GNINLASDLYSELLDLGIVPDEIL--------HMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 278 LSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
++P+ + YSTVI+G + EGN+
Sbjct: 796 VTPNVLLYSTVIAG-------------------------------------HHREGNLNE 818
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
A +L +M G + +++L++G +K
Sbjct: 819 AFRLHDEMLEKGIVHDDTVFNLLVSGRVEKP 849
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/525 (21%), Positives = 210/525 (40%), Gaps = 96/525 (18%)
Query: 35 SLKRLCREGRIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
+++ C+ + A +L M+ K G+ + TY+SVI F ++ A ++ EM+
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
G SV+ SLV YC+ + + KA+ + M E GL+PD ++ ++ FC
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEA----------------------------------L 179
I P + ++++
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 180 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
C + ++ A + M + G+ P+ + Y ++ A C + A + EM+ KG P+
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 240 VT---------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
T F V YN +I+GLC + + +A E+L+
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 273 M-PEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMND 328
+ E S Y+++I G +K+ D A+ +TY + ++ + T++S++N
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV-----ETYREMSENGKSPNVVTFTSLING 634
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
+ M AL++ H+M AY LI+G KK + A + G M
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL--M 692
Query: 389 PSYTVYDILLENCSN-SEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 447
P+ +VY+ L+ N + + ++L K +S D T +TTM+ DG K DG
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFT-YTTMI------DGLLK-DG 744
Query: 448 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
N++ A ++Y E++ G P + L++ L
Sbjct: 745 --------------NINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 175/430 (40%), Gaps = 44/430 (10%)
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
GF + +N L+ AY R +D AV M +R + P V N V+S
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
V G+ D T LM A E++ EA +FR ++ G PD L ++ + A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C + A L EM +G L G + TY ++I +EEA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREM--RGKL-----GVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 274 PEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLA 331
G+ + +++++G E KA+ D ++ + + L+ + SVM ++
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKAL-----DLFNRMEEEGLAPDKVMFSVMVEWFC 391
Query: 332 EG-NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 390
+ M++A++ M S V +I G KA + EA L I +D F S +
Sbjct: 392 KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL-KAESPEAA---LEIFNDSFESWIA 447
Query: 391 --YTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGG 448
+ I L C + DAAT+ M+ K + +
Sbjct: 448 HGFMCNKIFLLFCKQGKV-----------------DAATSFLKMMEQKGI-----EPNVV 485
Query: 449 MYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNT 508
YN ++ HCR N+ A +++ EM+ G P+ F+ LI ++ + +W + N
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK-DEQNAWDVINQ 544
Query: 509 LRSCNLSDSE 518
+ + N +E
Sbjct: 545 MNASNFEANE 554
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 116/526 (22%), Positives = 201/526 (38%), Gaps = 101/526 (19%)
Query: 57 CKGLFLDERTY------SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
C GL +D + ++V+ N ID A + ++M+ G + VT L+ A
Sbjct: 191 CFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASL 250
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDA 169
R ++AV I R + RG PD ++ + C K G+
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
TY+S++ A E + EA + EM+ G+ + T L+N C E KA L +
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
M +G PD V ++ ++ C +E+A+E M + ++P +V T+I
Sbjct: 371 MEEEGLAPD--------KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 290 SG-LKIETEDKAIWWLDEDTYDS-----------------------------LMDSLSYE 319
G LK E+ + A+ + D+++S +M+ E
Sbjct: 423 QGCLKAESPEAALEIFN-DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 320 DT---YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL---------------- 360
Y+++M + NM A + +M G + YS+L
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 361 -------------------INGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN- 400
INGL K +T +AK L + + SM S T Y+ +++
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM-SCTSYNSIIDGF 600
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH---LKNKTD-----------GENKTD 446
+ S VE ++ S S + T T++++ N+ D E K D
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVT-FTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 447 GGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
Y LI C+ +++ AY ++ E+ G P++ +LIS
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 172/399 (43%), Gaps = 31/399 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDER------TYSSVIGWFCNLNKIDSAHTLLSEMIA 92
LC+ GR+ EAE++L MK L+ER TY+ +I +C K+++A ++S M
Sbjct: 380 LCKVGRLKEAEELLVRMK-----LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
P+VVT N++V CR ++ AV M + G+ +V +Y +I C
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++ G PDA Y +L+ LC +R +A + ++ GG S D L Y L+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
C K + + +M +G PD +TYN LI E ++
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDS--------ITYNTLISFFGKHKDFESVERMMEQ 606
Query: 273 MPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLA 331
M E GL P Y VI + D+A+ + S ++ + Y+ ++N +
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV--IYNILINAFSK 664
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM--- 388
GN +AL L +M + Y+ L L++K + + L D +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG-----ETLLKLMDEMVEQSCE 719
Query: 389 PSYTVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAA 426
P+ +IL+E S S E L + ++ YS+ ++ A+
Sbjct: 720 PNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKAS 758
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 184/461 (39%), Gaps = 64/461 (13%)
Query: 71 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 130
I C + ++A +LS+++ +N+L+ R + + ++ M E +
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 131 SPDVDSYNRVISKFCXXXXXXXX----XXXXXXXVDKG--IFPDAATYSSLMEALCVEQR 184
PDV + +I+ C D G I D+ +++L++ LC R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 185 LSEAFDLFREM-LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-- 241
L EA +L M L P+ +TY L++ C G+ A + M P+ VT
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 242 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
G +VTY LIH C + VE+A+ M E
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLAEGN 334
G SPDA Y +ISGL ++ + AI +++ +D L+ Y+ ++ + + N
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA----YNMLIGLFCDKNN 561
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
++ ++ DM ++G + Y+ LI+ K +R + + DG P+ T Y
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL--DPTVTTY 619
Query: 395 DILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 453
+++ CS E ++L KD + H+ + + +YN+L
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGL----------HSKV-----------NPNTVIYNIL 658
Query: 454 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDD 494
I + N +A ++ EM P++ + AL L++
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 167/422 (39%), Gaps = 44/422 (10%)
Query: 80 IDSAHTLLSEMIAKG--FSPSVVTYNSLVFAYCRRD--SVDKAVGILRAMAERGLSPDVD 135
+D A +L EM+ K F P+ +T + ++ + + +K + ++ + G+SP+
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
R IS C + +A +++L+ L +S DL +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
+ PD +T L+N C +A + ++M +G D + +N LI
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLID 378
Query: 256 GLCFLDRVEEALEILRGMP-EMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYD 310
GLC + R++EA E+L M E P+AV Y+ +I G K+ET + + + ED
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 311 SLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKART 370
+ T ++++ + A+ DM ++G + V Y LI+ +
Sbjct: 439 PNVV------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 371 REAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM--RDLSDDAATA 428
+A +Y Y+ +LE + + K L+ RD
Sbjct: 493 EKA----MYW-------------YEKMLEAGCSPDAKIYYALISGLCQVRRD-------- 527
Query: 429 HTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLAL 488
H + ++ +G D YN+LI C +N K Y M +M G P + L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 489 IS 490
IS
Sbjct: 588 IS 589
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 130/574 (22%), Positives = 230/574 (40%), Gaps = 80/574 (13%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI-AKGFSPSVVTYNSLVFAYCRRDSVDK 117
G TY ++ C + D+ + LL EM + G P + +++ + R + +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 118 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
+ ++ +++ G+ P + +N ++ + GI D TY LM+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM------- 230
L + R+ + F L + M GV+P+ + Y LL+A C G+ +A L EM
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVT 250
Query: 231 --------------IHKGFLPD--FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
I L + F GF P +VT ++ LC RV EALE+L +
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 275 EMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 330
G D V +T++ G K+ + ++ Y L +TY+ ++ Y
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGY------LPNVETYNLLIAGYC 364
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASD-----GF 385
G + AL +DM D ++ ++ LI GL RT + + +L + D G
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLK-ILEMMQDSDTVHGA 423
Query: 386 LSMP-SYTVYDILLENCSNSEFKSLVELVK------DYSMRDLS-------DDAATAHTT 431
P + +Y EN + L+++ K D S + +S DD TA+
Sbjct: 424 RIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQ 483
Query: 432 MLHLKNKTDGENKTDGGMYNLLIFEHCRSH------NVHKAYNMYMEMVHYGHAPHMFSV 485
M+ GE GG+ ++++ HC H + ++ + +MV G+ P +
Sbjct: 484 MI-------GE----GGVPSIIV-SHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTF 531
Query: 486 LALISAL-DDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEMA 544
A+I D++ N + +V + R C + D+E L E K +I + + M
Sbjct: 532 NAVIIGFCKQDKVMNGIKFVEDMAERGC-VPDTESYNPLLEELCVKGDIQKAWLLFSRMV 590
Query: 545 MDSLLLDGGK------CSYAPASRHVHFSAATII 572
S++ D C + HV+ S II
Sbjct: 591 EKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDII 624
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 175/440 (39%), Gaps = 30/440 (6%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M G+ D TY ++ N+I LL M G +P+ V YN+L+ A C+
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
V +A ++ M E P+ ++N +IS +C G PD T +
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
+ME LC E R+SEA ++ + G D + L+ C +G+ A EM KG
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
+LP+ + TYN LI G C + ++ AL+ M + + ++T+I GL I
Sbjct: 349 YLPN--------VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 295 ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
+ E DS + D Y+ V+ + E + AL+ M +
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK--LFPRA 458
Query: 355 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSN-SEFKSLVELV 413
V S + L +K + K + +G +PS V L+ S + + +EL+
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEG--GVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 414 KDYSMRDLSDDAATAHTTMLHLKNKTDGENK-------------TDGGMYNLLIFEHCRS 460
D R ++T + ++ + N D YN L+ E C
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Query: 461 HNVHKAYNMYMEMVHYGHAP 480
++ KA+ ++ MV P
Sbjct: 577 GDIQKAWLLFSRMVEKSIVP 596
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 134/329 (40%), Gaps = 58/329 (17%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC EGR+ EA ++LE ++ KG +D ++++ +C L K+ A EM KG+ P+
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAE--------------RGLS------------- 131
V TYN L+ YC +D A+ M RGLS
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
Query: 132 ----------PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
+D YN VI F + +FP A S + +LC
Sbjct: 413 MMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCE 470
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+ + + + +M+ G P + L++ G+ ++ L ++M+ +G+L
Sbjct: 471 KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL----- 525
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAI 301
P T+NA+I G C D+V ++ + M E G PD Y+ ++ L ++ + +
Sbjct: 526 ---PRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Query: 302 WWL-----------DEDTYDSLMDSLSYE 319
W L D + SLM LS +
Sbjct: 583 WLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 145/362 (40%), Gaps = 41/362 (11%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C E ++ ++ +LE G D T + V+ CN ++ A +L + +KG V
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
V N+LV YC + A M +G P+V++YN +I+ +C
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
I + AT+++L+ L + R + + EM++ D + R+ C++
Sbjct: 379 MKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL-EMMQ---DSDTVHGARIDPYNCVIYG 434
Query: 220 FTKAFHLHD-----------------------EMIHKGFLPDFVTGFS--------PAIV 248
F K D + KG + D T + P+I+
Sbjct: 435 FYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSII 494
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLD--E 306
+ LIH ++EE+LE++ M G P + ++ VI G +DK + + E
Sbjct: 495 VSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFC--KQDKVMNGIKFVE 552
Query: 307 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
D + + ++Y+ ++ + +G++Q+A L M + +S L+ L +
Sbjct: 553 DMAER--GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQ 610
Query: 367 KA 368
K
Sbjct: 611 KT 612
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 25/411 (6%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSE-----------SKKVGEAFQSLKRLCREGRIPEAE 49
+ L+V + N +I GFA + S + S K + L GR EAE
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
+ E ++ G+ R Y++++ + + A +++SEM +G SP TY+ L+ AY
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
+ A +L+ M + P+ ++R+++ F G+ PD
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
Y+ +++ L A F ML G+ PD +T+ L++ C G A + +
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
M +G L P TYN +I+ +R ++ +L M G+ P+ V ++T++
Sbjct: 505 MERRGCL--------PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 290 SGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
K + AI L+E L S + Y++++N Y G ++A+ M+ D
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSST---MYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
G S +A + LIN + R EA L Y+ +G P Y L++
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV--KPDVVTYTTLMK 662
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ GR AE+M E M+ +G TY+ +I + + + D LL +M ++G P+V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VT+ +LV Y + + A+ L M GL P YN +I+ +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
G+ P +SL+ A ++R +EAF + + M GV PD +TYT L+ A V +
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 220 FTKAFHLHDEMIHKGFLPD 238
F K +++EMI G PD
Sbjct: 670 FQKVPVVYEEMIMSGCKPD 688
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 185/466 (39%), Gaps = 49/466 (10%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAH--TLLSEMIAKGFSP 97
R I +A ++ M+ G D YS VI NKIDS L E+
Sbjct: 208 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL 267
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
V N ++ + + KA+ +L GLS + +IS
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
GI P Y++L++ L +A + EM + GVSPDE TY+ L++A
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 218 GEFTKAFHLHDEMIHKGFLPD-FVTGFSPAIVTYNALIHGLCFLDRVE--EALEILRGMP 274
G + A + EM P+ FV ++ L+ G F DR E + ++L+ M
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFV---------FSRLLAG--FRDRGEWQKTFQVLKEMK 436
Query: 275 EMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLA 331
+G+ PD Y+ VI K D A+ T+D ++ D T++++++ +
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAM-----TTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY 391
G A ++ M R G L Y+++IN + R + KR L + S G L P+
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL--PNV 549
Query: 392 TVYDILLENCSNS-EFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 450
+ L++ S F +E +++ L K MY
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGL----------------------KPSSTMY 587
Query: 451 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 496
N LI + + +A N + M G P + ++ +LI+A +DR
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 27/271 (9%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
Q+L+ MK G+ D + Y+ VI F N +D A T M+++G P VT+N+L+ +
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
C+ A + AM RG P +YN +I+ + +GI P+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
T+++L++ R ++A + EM G+ P Y L+NA G +A +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 230 MIHKGFLPDFV---------------------------TGFSPAIVTYNALIHGLCFLDR 262
M G P + G P +VTY L+ L +D+
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
++ + M G PD S + S L+
Sbjct: 670 FQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
+ R + +++L MK +G+ + T+++++ + + + A L EM + G PS
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
YN+L+ AY +R ++AV R M GL P + + N +I+ F
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
+ G+ PD TY++LM+AL + + ++ EM+ G PD + L +A
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 73/428 (17%)
Query: 68 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 127
S++I K+ A + A G+ +V +++L+ AY R ++A+ + +M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 128 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 187
GL P++ +YN VI DA + +
Sbjct: 297 YGLRPNLVTYNAVI--------------------------DACGKGGM--------EFKQ 322
Query: 188 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
F EM R GV PD +T+ LL C G + A +L DEM ++ D +
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD--------V 374
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDE 306
+YN L+ +C +++ A EIL MP + P+ V YSTVI G K D+A+ E
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 307 DTYDSL-MDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
Y + +D +S Y+++++ Y G + AL + +M+ G V Y+ L+ G
Sbjct: 435 MRYLGIALDRVS----YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVKDYSMRDLSDD 424
K+ + E K+ + + L P+ Y L++ S +K +E+ +++ L D
Sbjct: 491 KQGKYDEVKKVFTEMKREHVL--PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 425 AATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFS 484
+Y+ LI C++ V A ++ EM G +P++ +
Sbjct: 549 VV----------------------LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 485 VLALISAL 492
++I A
Sbjct: 587 YNSIIDAF 594
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 28/302 (9%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR---------------LCREGRIPEA 48
N+ YN +I A GK E K+V + F ++R +C G + EA
Sbjct: 302 NLVTYNAVI----DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 49 EQ-MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
+ + + M + + D +Y++++ C ++D A +L++M K P+VV+Y++++
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
+ + D+A+ + M G++ D SYN ++S + GI
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D TY++L+ + + E +F EM R V P+ LTY+ L++ G + +A +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
E G D +V Y+ALI LC V A+ ++ M + G+SP+ V Y++
Sbjct: 538 REFKSAGLRAD--------VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 288 VI 289
+I
Sbjct: 590 II 591
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+ GR EA + M+ G+ LD +Y++++ + + + + A +L EM + G
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VVTYN+L+ Y ++ D+ + M + P++ +Y+ +I +
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
G+ D YS+L++ALC + A L EM + G+SP+ +TY +++A
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 45/248 (18%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR----------------LCREGRIPE 47
+V YN ++ G+ GK D E KKV F +KR + G E
Sbjct: 478 DVVTYNALLGGYGKQ-GKYD-EVKKV---FTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A ++ K GL D YS++I C + SA +L+ EM +G SP+VVTYNS++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 108 AYCRRDSVDKAV----GILRAMAERGLSPDVDSY-NRVISKFCXXXXXXXXXXXXXXXVD 162
A+ R ++D++ G + LS ++ NRVI F
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTES----------- 641
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+ T E + Q LS ++FR+M + + P+ +T++ +LNAC F
Sbjct: 642 -----NNRTTKDCEEGM---QELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Query: 223 AFHLHDEM 230
A L +E+
Sbjct: 694 ASMLLEEL 701
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC G + +A +++ ++ G LD Y+S+I C +++ A L+ EM G +
Sbjct: 404 LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
N+L+ R + +A LR M + G P V SYN +I C
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK 523
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
++ G PD TYS L+ LC ++++ A +L+ + L+ G+ D + + L++ C VG
Sbjct: 524 EMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ A + M H+ + +VTYN L+ G + A I M +MGL
Sbjct: 584 KLDDAMTVMANMEHRNCTAN--------LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 279 SPDAVCYSTVISGL 292
PD + Y+T++ GL
Sbjct: 636 QPDIISYNTIMKGL 649
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 185/424 (43%), Gaps = 32/424 (7%)
Query: 8 YNGMIRGFATAAG--KSDS-----ESKKVGEAFQS----LKRLCREGRIPEAEQMLEVMK 56
YN ++ F A K +S E+ V Q+ +K C++ +A L+ M
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 116
+G D +YS+VI K+D A L EM +G +P V YN L+ + +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 117 KAVGIL-RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
A+ + R + + + P+V ++N +IS D TYSSL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ LC + +A +F E+ S D +TY +L C G+ ++ L M HK
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355
Query: 236 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE 295
S IV+YN LI GL +++EA I R MP G + D Y I GL +
Sbjct: 356 --------SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 296 TE-DKAIWWLDE-DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LS 352
+KA+ + E ++ +D + Y+S+++ + ++ A L +MS+ G L+
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYA----YASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Query: 353 SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVE 411
S+V + LI GL + +R EA L + +G P+ Y+IL+ C +F
Sbjct: 464 SHVC-NALIGGLIRDSRLGEASFFLREMGKNG--CRPTVVSYNILICGLCKAGKFGEASA 520
Query: 412 LVKD 415
VK+
Sbjct: 521 FVKE 524
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 200/459 (43%), Gaps = 51/459 (11%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
+ E + + G+ + +TY+ +I C + + A L M +GF P V +Y++++
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV-DKGI 165
+ +D A+ + M+ERG++PDV YN +I F + D +
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
+P+ T++ ++ L R+ + ++ M + D TY+ L++ C G KA
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ +E+ + D +VTYN ++ G C +++E+LE+ R M E S + V Y
Sbjct: 312 VFNELDERKASID--------VVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSY 362
Query: 286 STVISGL----KIETEDKAIWWLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQRA 338
+ +I GL KI+ E IW LM + Y + TY ++ G + +A
Sbjct: 363 NILIKGLLENGKID-EATMIW--------RLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 339 LQLDHDM-SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
L + ++ S G+L Y AY+ +I+ L KK R EA + ++ G + + S+ V + L
Sbjct: 414 LGVMQEVESSGGHLDVY-AYASIIDCLCKKKRLEEASNLVKEMSKHG-VELNSH-VCNAL 470
Query: 398 LENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEH 457
+ L++D + + S L+ + YN+LI
Sbjct: 471 IGG-----------LIRDSRLGEAS----------FFLREMGKNGCRPTVVSYNILICGL 509
Query: 458 CRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDR 496
C++ +A EM+ G P + + L+ L DR
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 157/396 (39%), Gaps = 81/396 (20%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + GR+ + ++ E MK D TYSS+I C+ +D A ++ +E+ + S
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 99 VVTYNSLVFAYCR----------------------------------RDSVDKAVGILRA 124
VVTYN+++ +CR +D+A I R
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
M +G + D +Y I C G D Y+S+++ LC ++R
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 185 LSEAFDL-----------------------------------FREMLRGGVSPDELTYTR 209
L EA +L REM + G P ++Y
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
L+ C G+F +A EM+ G+ PD + TY+ L+ GLC +++ ALE+
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPD--------LKTYSILLCGLCRDRKIDLALEL 556
Query: 270 LRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 328
+ GL D + ++ +I GL + D A+ + + + +L TY+++M
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV---TYNTLMEG 613
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+ G+ RA + M + G ++Y+ ++ GL
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 204/494 (41%), Gaps = 48/494 (9%)
Query: 23 DSESKKVGEAFQS------LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCN 76
DS ++ G A + L+RL + +++E+++ + DE SVI +
Sbjct: 31 DSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGK 90
Query: 77 LNKIDSAHTLLSEMIAK-GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 135
+ D A + M G P++ +YN+L+ A+ K + G++P++
Sbjct: 91 NSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQ 150
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
+YN +I C +G PD +YS+++ L +L +A +LF EM
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
GV+PD Y L++ + A L D ++ + P + T+N +I
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED-------SSVYPNVKTHNIMIS 263
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMD 314
GL RV++ L+I M + D YS++I GL DKA E ++ L +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA-----ESVFNELDE 318
Query: 315 SLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 372
+ D TY++++ + G ++ +L+L M ++ V+Y++LI GL + + E
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN-IVSYNILIKGLLENGKIDE 377
Query: 373 AKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTT 431
A + + G+ + T Y I + C N + ++++ +++ H
Sbjct: 378 ATMIWRLMPAKGYAA--DKTTYGIFIHGLCVNGYVNKALGVMQEV-------ESSGGHL- 427
Query: 432 MLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISA 491
D Y +I C+ + +A N+ EM +G + ALI
Sbjct: 428 --------------DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 492 LDDDRMYNEMSWVI 505
L D E S+ +
Sbjct: 474 LIRDSRLGEASFFL 487
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 55
YN +I G A GK S V E ++ L LCR+ +I A ++
Sbjct: 502 YNILICGLCKA-GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
GL D ++ +I C++ K+D A T+++ M + + ++VTYN+L+ + +
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
++A I M + GL PD+ SYN ++ C + GIFP T++ L
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Query: 176 MEAL 179
+ A+
Sbjct: 681 VRAV 684
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 182/404 (45%), Gaps = 27/404 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L GR EA+ + + + G +Y++++ + S +++SE+ G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ +N+++ A+ +++ AV L M E GL+P +YN +I +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 159 XXVDKG---IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+++G + P+ T++ L++A C ++++ EA+++ ++M GV PD +TY +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
GE +A E++ K + + P T ++ G C RV + L +R M E
Sbjct: 235 QKGETVRA---ESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYD---SLMDSLSYED---TYSSVMNDY 329
M + + V ++++I+G + +D D D +LM + + TYS+VMN +
Sbjct: 289 MRVEANLVVFNSLINGF--------VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
+ G M++A Q+ +M + G AYS+L G R +E K+ + + S P
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY---VRAKEPKKAEELLETLIVESRP 397
Query: 390 SYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 432
+ ++ ++ CSN + + +S + T T M
Sbjct: 398 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG---FSPSV 99
G + +A Q L MK GL TY+++I + K + + LL M+ +G P++
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
T+N LV A+C++ V++A +++ M E G+ PD +YN + + +
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY---VQKGETVRAESE 245
Query: 160 XVDKGIF-----PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
V+K + P+ T ++ C E R+ + R M V + + + L+N
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING- 304
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVT-----GFSPAIVTYNALIHGLCFLDRVEEALEI 269
E++ + + + +T ++TY+ +++ +E+A ++
Sbjct: 305 ------------FVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 352
Query: 270 LRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLM-DSLSYEDTYSSVMND 328
+ M + G+ PDA YS + G E K E+ ++L+ +S +++V++
Sbjct: 353 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA----EELLETLIVESRPNVVIFTTVISG 408
Query: 329 YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
+ + G+M A+++ + M + G + + L+ G
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 19/274 (6%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+V + L+ R +A + + +AE G P + SY +++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
G D+ +++++ A + +A +M G++P TY L+ +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G+ ++ L D M+ +G + P I T+N L+ C +VEEA E+++ M E G
Sbjct: 164 GKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 278 LSPDAVCYSTVIS-----GLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYL 330
+ PD V Y+T+ + G + E + + +M + + T V+ Y
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRAESEVV-------EKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
EG ++ L+ M ++ V ++ LING
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 17/343 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K C EG EA + M+ KG+ + Y++++ + N I+ L +EM KG
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PS TYN L+ AY RR D +LR M + GL P+V SY +IS +
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
Query: 156 XXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+ K G+ P + +Y++L+ A V +A+ F EM + G+ P TYT +L+A
Sbjct: 471 DAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G+ K I K L + + G +TYN L+ G EA +++
Sbjct: 531 RRSGDTGKLME-----IWKLMLREKIKG---TRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLA 331
+MGL P + Y+ +++ +D + L ++ M +L+ + TYS+++ ++
Sbjct: 583 KMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE-----MAALNLKPDSITYSTMIYAFVR 637
Query: 332 EGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
+ +RA M + G + +Y L L KA+T+ K
Sbjct: 638 VRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRK 680
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDT 308
YNA I GL R ++A E+ M ++ + PD V + +I+ L K K +W + E
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 309 YDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
+ + +D + ++ + EG + AL + +M + G S+ + Y+ L++ +K
Sbjct: 336 SEKGVK--WSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSN 393
Query: 369 RTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVEL-------------VKD 415
E + + G PS Y+IL++ + +VE VK
Sbjct: 394 HIEEVEGLFTEMRDKGL--KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 416 YS--------MRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAY 467
Y+ + +SD AA A M + K + Y LI + S KAY
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHS------YTALIHAYSVSGWHEKAY 505
Query: 468 NMYMEMVHYGHAPHMFSVLALISALD 493
+ EM G P SV S LD
Sbjct: 506 ASFEEMCKEGIKP---SVETYTSVLD 528
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
G + +A ++ + + G+ + R+Y+ ++ FC + + A+ L +M+ + P V +
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
Y L+ +CR+ V+ A+ +L M +G PD SY +++ C
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
KG PD Y++++ C E R +A + +ML G SP+ ++Y L+ C G F
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+ +EMI KGF P F N L+ G C +VEEA +++ + + G +
Sbjct: 348 EGKKYLEEMISKGFSPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 282 AVCYSTVISGLKIETEDKAIWWLDED 307
+ + VI + E E + I ED
Sbjct: 400 SDTWEMVIPLICNEDESEKIKLFLED 425
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 89 EMIAKGFSPSVVTYNSLV-FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 147
+M+ F+P N ++ R + KA + ++ G+ P+ SYN ++ FC
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
+++ + PD +Y L++ C + +++ A +L +ML G PD L+Y
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 208 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 267
T LLN+ C + +A+ L M KG PD +V YN +I G C DR +A
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPD--------LVHYNTMILGFCREDRAMDAR 315
Query: 268 EILRGMPEMGLSPDAVCYSTVISGL 292
++L M G SP++V Y T+I GL
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 140/336 (41%), Gaps = 53/336 (15%)
Query: 85 TLLSEMIAK----GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 140
L+ +++AK G+ + + L+ Y +K + M E +P NR+
Sbjct: 101 NLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160
Query: 141 ISKFCXXXXXXXXXXXXXXXVD-KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG 199
+ G+ P+ +Y+ LM+A C+ LS A+ LF +ML
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERD 220
Query: 200 VSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCF 259
V PD +Y L+ C G+ A L D+M++KGF+PD ++Y L++ LC
Sbjct: 221 VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD--------RLSYTTLLNSLCR 272
Query: 260 LDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE 319
++ EA ++L M G +PD V Y+T+I G E D MD+
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE--------------DRAMDARKVL 318
Query: 320 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
D DM +G + V+Y LI GL + E K+ L
Sbjct: 319 D-----------------------DMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE 355
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVK 414
+ S GF P ++V + L++ CS + + ++V+
Sbjct: 356 MISKGF--SPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ CR+G++ A ++L+ M KG D +Y++++ C ++ A+ LL M KG
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P +V YN+++ +CR D A +L M G SP+ SY +I C
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ KG P + + L++ C ++ EA D+ +++ G + T+ ++ C
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDER------TYSSVIGWFCNLNKIDSAHTLLSEMIA 92
LC+ GR+ EAE++L MK L+ER TY+ +I +C K+++A ++S M
Sbjct: 380 LCKVGRLKEAEELLVRMK-----LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
P+VVT N++V CR ++ AV M + G+ +V +Y +I C
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++ G PDA Y +L+ LC +R +A + ++ GG S D L Y L+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSP 245
C K + + +M +G PD +T G P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGL----SPDAVCYSTVISGL 292
+ TY A+I C + ++EAL++ + +MGL +P+ V Y+ +I+
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAF 662
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 194/485 (40%), Gaps = 71/485 (14%)
Query: 71 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 130
I C + ++A +LS+++ +N+L+ R + + ++ M E +
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 131 SPDVDSYNRVISKFCXXXXXXXX----XXXXXXXVDKG--IFPDAATYSSLMEALCVEQR 184
PDV + +I+ C D G I D+ +++L++ LC R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 185 LSEAFDLFREM-LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-- 241
L EA +L M L P+ +TY L++ C G+ A + M P+ VT
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 242 -------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
G +VTY LIH C + VE+A+ M E
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLAEGN 334
G SPDA Y +ISGL ++ + AI +++ +D L+ Y+ ++ + + N
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA----YNMLIGLFCDKNN 561
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
++ ++ DM ++G + Y+ LI+ K +R + + DG P+ T Y
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL--DPTVTTY 619
Query: 395 DILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 453
+++ CS E ++L KD + H+ + + +YN+L
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGL----------HSKV-----------NPNTVIYNIL 658
Query: 454 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDD-------RMYNEMSWVIN 506
I + N +A ++ EM P++ + AL L++ ++ +EM +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLV 718
Query: 507 NTLRS 511
N +RS
Sbjct: 719 NQIRS 723
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/488 (20%), Positives = 176/488 (36%), Gaps = 83/488 (17%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ E+ K K + L +I WF + ++ + L+ E + S V N +V
Sbjct: 138 RLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQS-VLVYERLDSNMKNSQVR-NVVVDVL 195
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV-------D 162
R VD A +L M ++ V NR+ + +
Sbjct: 196 LRNGLVDDAFKVLDEMLQK---ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSS 252
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG------------------------ 198
G+ P++ + + +LC R + A+D+ ++++
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 199 -----------GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
+ PD +T L+N C +A + ++M +G D
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADS 370
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMP-EMGLSPDAVCYSTVISGL----KIETEDKAIW 302
+ +N LI GLC + R++EA E+L M E P+AV Y+ +I G K+ET + +
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
+ ED + T ++++ + A+ DM ++G + V Y LI+
Sbjct: 431 RMKEDEIKPNV------VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIH 484
Query: 363 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLS 422
+ +A +Y Y+ +LE + + K L+
Sbjct: 485 ACCSVSNVEKA----MYW-------------YEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 423 DDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHM 482
DA ++ +G D YN+LI C +N K Y M +M G P
Sbjct: 528 HDAIRV------VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 483 FSVLALIS 490
+ LIS
Sbjct: 582 ITYNTLIS 589
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 174/382 (45%), Gaps = 21/382 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L GR EA + + +G TY++++ S +L+S++ G P
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ +N+++ A ++D+A+ I M E G P ++N +I +
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 159 XXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ D+ + P+ T + L++A C ++++ EA+++ +M GV PD +T+ L A +
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G A ++MI L + V P + T +++G C ++EEAL M E+G
Sbjct: 509 GSTCTA----EDMIIPRMLHNKV---KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 278 LSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEG 333
+ P+ ++++I G L I D +D LM+ + T+S++MN + + G
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDGVGEVVD------LMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 334 NMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV 393
+M+R ++ DM G A+S+L G + +A++ L + G P+ +
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV--RPNVVI 673
Query: 394 YDILLEN-CSNSEFKSLVELVK 414
Y ++ CS E K +++ K
Sbjct: 674 YTQIISGWCSAGEMKKAMQVYK 695
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 124
RT +++ +C K++ A M G P++ +NSL+ + + +D ++
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
M E G+ PDV +++ +++ + ++ GI PD +S L +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
+A + +M + GV P+ + YT++++ C GE KA ++ +M + G S
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG-------IVGLS 704
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
P + TY LI G + +A E+L+ M + P + G K
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWK 753
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 157/369 (42%), Gaps = 45/369 (12%)
Query: 1 MALNVNIYNGMIRGFATAAGKS--DSESKKVGEAF--QSLKRLCREGRIPEAEQMLEVMK 56
++LN+ ++ ++ G A A KS D+ K Q +K L EG + EA ++ V+K
Sbjct: 114 VSLNI-LFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLK 172
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 116
G+ T +SV+ K+D L EM+ F + L+ A C V
Sbjct: 173 DMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCDGGDVS 230
Query: 117 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 176
+ +L+ ++GL P Y ++IS FC + FP Y ++
Sbjct: 231 EGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKII 290
Query: 177 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 236
+ LC+ ++ EA+ +F+ + G +PD + YT ++ C G A L EMI KG
Sbjct: 291 KGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR 350
Query: 237 PD---------------------------FVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
P+ G+ +++ N +I G C + +EA EI
Sbjct: 351 PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEI 410
Query: 270 LRGMPEMGLSPDAVCYSTVI----------SGLKIETEDKAIWWLDED-TYDSLMDSLSY 318
+ M E G++P+A+ Y+ +I GLK+ E KA+ Y +L+ +L
Sbjct: 411 FKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKM 470
Query: 319 EDTYSSVMN 327
D+ ++ +N
Sbjct: 471 SDSVATSLN 479
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 130/348 (37%), Gaps = 38/348 (10%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G P+ ++ L E + EA +++ + G+S +T +L C + +
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ LH EM+ F + + LI LC V E E+L+ + GL P
Sbjct: 200 WELHKEMVESEFDSERI----------RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQY 249
Query: 284 CYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD- 342
Y+ +ISG E + A + L +++ S + + +G QL+
Sbjct: 250 VYAKLISGF-CEIGNYAC------MSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA 302
Query: 343 ----HDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
++ GY V Y+ +I G +K A++ + G P+ Y++++
Sbjct: 303 YCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM--RPNEFAYNVMI 360
Query: 399 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH--------------LKNKTDGENK 444
SLVE + +R+ + TM+ KN ++
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 445 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+ YN LI C+ + V K +Y E+ G P + AL+ L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 35 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK- 93
+++ LC GR+ EA+ +++ + K D TY+ ++ C + + + EM
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
P +V++ L+ C ++ +A+ ++ + G PD YN ++ FC
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
++G+ PD TY++L+ L R+ EA + M+ G PD TYT L+N
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C GE A L +EM +G P+ TYN L+HGLC +++ +E+ M
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPN--------DCTYNTLLHGLCKARLMDKGMELYEMM 396
Query: 274 PEMGLSPDAVCYSTVISGL 292
G+ ++ Y+T++ L
Sbjct: 397 KSSGVKLESNGYATLVRSL 415
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 11/295 (3%)
Query: 80 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 139
I + H +L+ M+ G P VT + V + C VD+A +++ + E+ PD +YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 140 VISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
++ C D + PD +++ L++ +C + L EA L ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G PD Y ++ C + + ++A ++ +M +G PD +TYN LI GL
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGLS 311
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY 318
RVEEA L+ M + G PD Y+++++G+ + E L E+
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM--EARGCAPN 369
Query: 319 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
+ TY+++++ M + ++L M G Y+ L+ L K + EA
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
+C + EA ++ + G D Y++++ FC L+K A + +M +G P
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+TYN+L+F + V++A L+ M + G PD +Y +++ C
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+G P+ TY++L+ LC + + + +L+ M GV + Y L+ + G
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 219 EFTKAFHLHDEMIHKGFLPD 238
+ +A+ + D + L D
Sbjct: 420 KVAEAYEVFDYAVDSKSLSD 439
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K C + EA + + MK +G+ D+ TY+++I +++ A L M+ G+
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P TY SL+ CR+ A+ +L M RG +P+ +YN ++ C
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF 192
G+ ++ Y++L+ +L +++EA+++F
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 129/364 (35%), Gaps = 69/364 (18%)
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V+ G+ PD T + +LC R+ EA DL +E+ PD TY LL C +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL 210
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+ DEM DF P +V++ LI +C + EA+ ++ + G P
Sbjct: 211 HVVYEFVDEMRD-----DF--DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 281 DAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQ 340
D Y+T++ G L++G+ A+
Sbjct: 264 DCFLYNTIMKGFCT-----------------------------------LSKGS--EAVG 286
Query: 341 LDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 400
+ M +G + Y+ LI GL K R EA+ L + G+ P Y L+
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY--EPDTATYTSLMNG 344
Query: 401 -CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCR 459
C E + L+++ R + + T YN L+ C+
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPNDCT----------------------YNTLLHGLCK 382
Query: 460 SHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSEQ 519
+ + K +Y M G L+ +L E V + + S +LSD+
Sbjct: 383 ARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASA 442
Query: 520 LKVL 523
L
Sbjct: 443 YSTL 446
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 185/424 (43%), Gaps = 42/424 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L GR EA+ + + + G +Y++++ + S +++SE+ G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ +N+++ A+ +++ AV L M E GL+P +YN +I +
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 159 XXVDKG---IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+++G + P+ T++ L++A C ++++ EA+++ ++M GV PD +TY +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
GE +A E++ K + + P T ++ G C RV + L +R M E
Sbjct: 235 QKGETVRA---ESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED--------------- 320
M + + V ++++I+G +E D+ +DE T L+ S + E
Sbjct: 289 MRVEANLVVFNSLINGF-VEVMDRD--GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTL 345
Query: 321 -----------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
TYS+VMN + + G M++A Q+ +M + G AYS+L G R
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY---VR 402
Query: 370 TREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATA 428
+E K+ + + S P+ ++ ++ CSN + + +S + T
Sbjct: 403 AKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 462
Query: 429 HTTM 432
T M
Sbjct: 463 ETLM 466
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 159/399 (39%), Gaps = 54/399 (13%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+V + L+ R +A + + +AE G P + SY +++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
G D+ +++++ A + +A +M G++P TY L+ +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G+ ++ L D M+ +G + P I T+N L+ C +VEEA E+++ M E G
Sbjct: 164 GKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 278 LSPDAVCYSTVIS-----GLKIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYL 330
+ PD V Y+T+ + G + E + + +M + + T V+ Y
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRAESEVV-------EKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPS 390
EG ++ L+ M ++ V ++ LING + + DG +
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF------------VEVMDRDG---IDE 316
Query: 391 YTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY 450
T+ +L+ F VELV + M+ +L L + + K D Y
Sbjct: 317 VTLTLLLM------SFNEEVELVGNQKMK----------VQVLTLMKECN--VKADVITY 358
Query: 451 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAP--HMFSVLA 487
+ ++ + + KA ++ EMV G P H +S+LA
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 138/341 (40%), Gaps = 55/341 (16%)
Query: 8 YNGMIRGFATAAGKSDSESK-----------KVGEAFQSLKRL----CREGRIPEAEQML 52
YN +I+G+ A GK + S+ VG ++ L C++ ++ EA +++
Sbjct: 153 YNTLIKGYGIA-GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT-LLSEMIAK-GFSPSVVTYNSLVFAYC 110
+ M+ G+ D TY+++ + + A + ++ +M+ K P+ T +V YC
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX---------------------- 148
R V + +R M E + ++ +N +I+ F
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVE 331
Query: 149 ---XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
+ + D TYS++M A + +A +F+EM++ GV PD
Sbjct: 332 LVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 391
Query: 206 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 265
Y+ L E KA L + +I + P +V + +I G C +++
Sbjct: 392 AYSILAKGYVRAKEPKKAEELLETLIVES---------RPNVVIFTTVISGWCSNGSMDD 442
Query: 266 ALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
A+ + M + G+SP+ + T++ G E K W +E
Sbjct: 443 AMRVFNKMCKFGVSPNIKTFETLMWGY---LEVKQPWKAEE 480
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
Q+L +MK + D TYS+V+ + + ++ A + EM+ G P Y+ L Y
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
R KA +L + P+V + VIS +C G+ P+
Sbjct: 401 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVG 218
T+ +LM ++ +A ++ +M+RG GV P+ T+ L A + G
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVL-QMMRGCGVKPENSTFLLLAEAWRVAG 508
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 39 LCREGRIPEAEQ-MLEVMKCKGLFLD--ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+C G A+Q +++ MK K + +Y++++ + + + +M+ GF
Sbjct: 191 ICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF 250
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
SP V+TYN L++ R +D+ + MA G SPD +YN ++
Sbjct: 251 SPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALT 310
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ GI P Y++L++ L L EM++ G PD + YT ++
Sbjct: 311 TLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+ GE KA + EM KG LP+ + TYN++I GLC EA +L+ M
Sbjct: 371 VSGELDKAKEMFREMTVKGQLPN--------VFTYNSMIRGLCMAGEFREACWLLKEMES 422
Query: 276 MGLSPDAVCYSTVISGLK 293
G +P+ V YST++S L+
Sbjct: 423 RGCNPNFVVYSTLVSYLR 440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 134/323 (41%), Gaps = 18/323 (5%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
+Y ++ F + + L+ EM+ GF + T+N L+ + +AV
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
P SYN +++ ++ G PD TY+ L L RL
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL---LWTNYRL 267
Query: 186 S--EAFD-LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ FD LF EM R G SPD TY LL+ ++G+ K + H G
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMK-----EVG 319
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAI 301
P+++ Y LI GL +E L M + G PD VCY+ +I+G + E DKA
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 302 WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
E T + ++ TY+S++ G + A L +M G ++V YS L+
Sbjct: 380 EMFREMTVKGQLPNVF---TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 362 NGLHKKARTREAKRDLLYIASDG 384
+ L K + EA++ + + G
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 99/229 (43%), Gaps = 12/229 (5%)
Query: 49 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
+QMLE G D TY+ ++ L K+D L EM GFSP TYN L+
Sbjct: 243 KQMLE----DGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 298
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
+ + A+ L M E G+ P V Y +I V G PD
Sbjct: 299 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 358
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
Y+ ++ V L +A ++FREM G P+ TY ++ C+ GEF +A L
Sbjct: 359 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 418
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
EM +G P+F V Y+ L+ L ++ EA +++R M + G
Sbjct: 419 EMESRGCNPNF--------VVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G++ +++ + M G D TY+ ++ NK +A T L+ M G PSV+
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
Y +L+ R +++ L M + G PDV Y +I+ +
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
KG P+ TY+S++ LC+ EA L +EM G +P+ + Y+ L++ G+
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 221 TKAFHLHDEMIHKG 234
++A + EM+ KG
Sbjct: 446 SEARKVIREMVKKG 459
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+ G + +A ++ E M+ + ++ R ++S++ +C + K+ A +L +M GF
Sbjct: 225 LDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF 283
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +V Y +L+ Y + A +LR M RG P+ + Y +I C
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
D TY++L+ C ++ + + + +M++ G+ P ELTY ++ A
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
F + L ++M + PD I YN +I C L V+EA+ + M E
Sbjct: 404 KKESFEECLELMEKMRQIEYHPD--------IGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Query: 276 MGLSPDAVCYSTVISGL 292
GLSP + +I+GL
Sbjct: 456 NGLSPGVDTFVIMINGL 472
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 148/350 (42%), Gaps = 19/350 (5%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E+ K ++ + ++ F + + + A +L EM GF P + L+ A C+
Sbjct: 172 EMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKH 231
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
SV A + M R ++ + ++ +C + G PD Y
Sbjct: 232 GSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDY 290
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L+ ++++A+DL R+M R G P+ YT L+ A C V +A + EM
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER 350
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV-ISG 291
D +VTY AL+ G C ++++ +L M + GL P + Y + ++
Sbjct: 351 YECEAD--------VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAH 402
Query: 292 LKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRD 348
K E+ ++ + +++ M + Y Y+ V+ G ++ A++L ++M +
Sbjct: 403 EKKESFEECLELMEK------MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
G + ++INGL + EA + + G S+ Y +LL
Sbjct: 457 GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLL 506
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 8/239 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR G++ EA+ +L M G D Y++++ + N K+ A+ LL +M +GF P+
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
Y L+ A C+ D +++A+ + M DV +Y ++S FC
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ KG+ P TY +M A ++ E +L +M + PD Y ++ C +GE
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A L +EM G SP + T+ +I+GL + EA + + M GL
Sbjct: 443 VKEAVRLWNEMEE--------NGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ LC+ R+ EA ++ M+ D TY++++ FC KID + +L +MI KG
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
PS +TY ++ A+ +++S ++ + ++ M + PD+ YN VI C
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 448
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML-RGGVSPDEL-TYTRLLNA 213
+ G+ P T+ ++ L + L EA D F+EM+ RG S + T LLN
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNT 508
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
+ A + + KG ++++ IH L +EA M
Sbjct: 509 VLKDKKLEMAKDVWSCITSKG-------ACELNVLSWTIWIHALFSKGYEKEACSYCIEM 561
Query: 274 PEMGLSPDAVCYSTVISGLK 293
EM P ++ ++ GLK
Sbjct: 562 IEMDFMPQPDTFAKLMKGLK 581
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 136/317 (42%), Gaps = 52/317 (16%)
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
+ +A ++ EM + G PDE + LL+A C G A L ++M + F
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR---------FP 249
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWL 304
+ + +L++G C + ++ EA +L M E G PD V Y+ ++SG +
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA----- 304
Query: 305 DEDTYDSLMD--SLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
D YD L D +E + Y+ ++ M+ A+++ +M R + V Y+
Sbjct: 305 --DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLS---MPSYTVY-DILLENCSNSEFKSLVELVKD 415
L++G K + D YI D + MPS Y I++ + F+ +EL++
Sbjct: 363 LVSGFCKWGKI-----DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME- 416
Query: 416 YSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVH 475
MR + E D G+YN++I C+ V +A ++ EM
Sbjct: 417 -KMRQI--------------------EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Query: 476 YGHAPHMFSVLALISAL 492
G +P + + + +I+ L
Sbjct: 456 NGLSPGVDTFVIMINGL 472
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 8/205 (3%)
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX 148
+M+ GF+P V+TYN ++FA R D+ +L M + G SPD+ +YN ++
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 149 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT 208
+ G+ P +++L++ L +L E ++ G +PD + YT
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 268
++ GE KA + EM KG LP+ + TYN++I G C + +EA
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPN--------VFTYNSMIRGFCMAGKFKEACA 418
Query: 269 ILRGMPEMGLSPDAVCYSTVISGLK 293
+L+ M G +P+ V YST+++ LK
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLK 443
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 49 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
EQMLE G D TY+ V+ L K D + LL EM+ GFSP + TYN L+
Sbjct: 246 EQMLE----DGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHH 301
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
+ A+ +L M E G+ P V + +I V G PD
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
Y+ ++ L +A ++F+EM G P+ TY ++ C+ G+F +A L
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
EM +G P+F V Y+ L++ L +V EA E+++ M E G
Sbjct: 422 EMESRGCNPNF--------VVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 50/332 (15%)
Query: 86 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
L+ EMI G+ + T+N L+ C G+ R + E+ + +Y
Sbjct: 174 LIDEMIKDGYPTTACTFN-LLICTC------GEAGLARDVVEQFIKSKTFNYR------- 219
Query: 146 XXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL 205
P +Y++++ +L ++ ++ +ML G +PD L
Sbjct: 220 ---------------------PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVL 258
Query: 206 TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEE 265
TY ++ A +G+ + + L DEM+ GF PD + TYN L+H L ++
Sbjct: 259 TYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPD--------LYTYNILLHHLATGNKPLA 310
Query: 266 ALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAI-WWLDEDTYDSLMDSLSYEDTYSS 324
AL +L M E+G+ P + ++T+I GL + +A +++DE + Y+
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV---CYTV 367
Query: 325 VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 384
++ Y++ G +++A ++ +M+ G L + Y+ +I G + +EA L + S G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 385 FLSMPSYTVYDILLENCSNS-EFKSLVELVKD 415
P++ VY L+ N N+ + E+VKD
Sbjct: 428 --CNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G+ ++L+ M G D TY+ ++ NK +A LL+ M G P V+
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVI 328
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
+ +L+ R ++ + + G +PDV Y +I+ +
Sbjct: 329 HFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM 388
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+KG P+ TY+S++ C+ + EA L +EM G +P+ + Y+ L+N G+
Sbjct: 389 TEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Query: 221 TKAFHLHDEMIHKG 234
+A + +M+ KG
Sbjct: 449 LEAHEVVKDMVEKG 462
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L R G++ + ++ G D Y+ +I + + +++ A + EM KG P+
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
V TYNS++ +C +A +L+ M RG +P+ Y+ +++
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 8/265 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR G++ + ++L+ M+ G + +Y+++I C + SA L + M G P+V
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VT+N+L+ +CR + +A + M ++P+ +YN +I+ +
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
V GI D TY++L+ LC + + +A +E+ + + P+ T++ L+ C+
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ F L+ MI +G P T+N L+ C + + A ++LR M +
Sbjct: 429 ADRGFELYKSMIR--------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 280 PDAVCYSTVISGLKIETEDKAIWWL 304
D+ V +GLK + +D+ + L
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKL 505
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 53/362 (14%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV------------------------- 99
R + S+ F +L K +A +M GF P+V
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 100 ----------VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
T N ++ YCR +DK + +L+ M G SYN +I+ C
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
G+ P+ T+++L+ C +L EA +F EM V+P+ +TY
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
L+N G+ AF +++M+ G D I+TYNALI GLC + +A +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQF 400
Query: 270 LRGMPEMGLSPDAVCYSTVISGLKI-ETEDKAIWWLDEDTYDSLMDSLSY--EDTYSSVM 326
++ + + L P++ +S +I G + + D+ + Y S++ S + E T++ ++
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGF-----ELYKSMIRSGCHPNEQTFNMLV 455
Query: 327 NDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
+ + + A Q+ +M R L S + V NGL + + + K+ L + F
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV-CNGLKHQGKDQLVKKLLQEMEGKKF 514
Query: 386 LS 387
L
Sbjct: 515 LQ 516
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 167/415 (40%), Gaps = 62/415 (14%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS--PSVVTYNSLVFAYCRRDSVDKAVGILR 123
T++ V+ K SA ++L +++ G P+ V +++L+++Y DS
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKV-FDALLYSYRECDS--------- 166
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+P V ++ + F D G P + ++ M +L +
Sbjct: 167 -------TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
R+ A +REM R +SP+ T +++ C G+ K L +M GF
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER--------LGF 269
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG----LKIETEDK 299
V+YN LI G C + AL++ M + GL P+ V ++T+I G +K++ K
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 300 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
+ ++ TY++++N Y +G+ + A + DM +G + Y+
Sbjct: 330 VFGEMKA------VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
LI GL K+A+TR+A + + + + + S T +++ C EL K
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSS-TFSALIMGQCVRKNADRGFELYKSMIRS 442
Query: 420 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 474
+ T +N+L+ CR+ + A + EMV
Sbjct: 443 GCHPNEQT----------------------FNMLVSAFCRNEDFDGASQVLREMV 475
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR ++ EA ++ MK + + TY+++I + + A +M+ G
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
++TYN+L+F C++ KA ++ + + L P+ +++ +I C
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ G P+ T++ L+ A C + A + REM+R + D T ++ N G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 219 EFTKAFHLHDEMIHKGFLPD 238
+ L EM K FL +
Sbjct: 498 KDQLVKKLLQEMEGKKFLQE 517
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 8/265 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR G++ + ++L+ M+ G + +Y+++I C + SA L + M G P+V
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
VT+N+L+ +CR + +A + M ++P+ +YN +I+ +
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
V GI D TY++L+ LC + + +A +E+ + + P+ T++ L+ C+
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ F L+ MI +G P T+N L+ C + + A ++LR M +
Sbjct: 429 ADRGFELYKSMIR--------SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 280 PDAVCYSTVISGLKIETEDKAIWWL 304
D+ V +GLK + +D+ + L
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKL 505
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 53/362 (14%)
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV------------------------- 99
R + S+ F +L K +A +M GF P+V
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 100 ----------VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
T N ++ YCR +DK + +L+ M G SYN +I+ C
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
G+ P+ T+++L+ C +L EA +F EM V+P+ +TY
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
L+N G+ AF +++M+ G D I+TYNALI GLC + +A +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQF 400
Query: 270 LRGMPEMGLSPDAVCYSTVISGLKI-ETEDKAIWWLDEDTYDSLMDSLSY--EDTYSSVM 326
++ + + L P++ +S +I G + + D+ + Y S++ S + E T++ ++
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGF-----ELYKSMIRSGCHPNEQTFNMLV 455
Query: 327 NDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
+ + + A Q+ +M R L S + V NGL + + + K+ L + F
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV-CNGLKHQGKDQLVKKLLQEMEGKKF 514
Query: 386 LS 387
L
Sbjct: 515 LQ 516
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 167/415 (40%), Gaps = 62/415 (14%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS--PSVVTYNSLVFAYCRRDSVDKAVGILR 123
T++ V+ K SA ++L +++ G P+ V +++L+++Y DS
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKV-FDALLYSYRECDS--------- 166
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
+P V ++ + F D G P + ++ M +L +
Sbjct: 167 -------TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
R+ A +REM R +SP+ T +++ C G+ K L +M GF
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER--------LGF 269
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG----LKIETEDK 299
V+YN LI G C + AL++ M + GL P+ V ++T+I G +K++ K
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 300 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
+ ++ TY++++N Y +G+ + A + DM +G + Y+
Sbjct: 330 VFGEMKA------VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
LI GL K+A+TR+A + + + + + S T +++ C EL K
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSS-TFSALIMGQCVRKNADRGFELYKSMIRS 442
Query: 420 DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 474
+ T +N+L+ CR+ + A + EMV
Sbjct: 443 GCHPNEQT----------------------FNMLVSAFCRNEDFDGASQVLREMV 475
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
CR ++ EA ++ MK + + TY+++I + + A +M+ G
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
++TYN+L+F C++ KA ++ + + L P+ +++ +I C
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ G P+ T++ L+ A C + A + REM+R + D T ++ N G
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Query: 219 EFTKAFHLHDEMIHKGFLPD 238
+ L EM K FL +
Sbjct: 498 KDQLVKKLLQEMEGKKFLQE 517
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 54/300 (18%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-------GWFCNLNKIDSAHTLLS 88
L LC+EG + EA LE + G +D SV GWF + K+ A L
Sbjct: 219 LDALCKEGHVREASMYLERI---GGTMDSNWVPSVRIFNILLNGWFRS-RKLKQAEKLWE 274
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR--AMAERGLS--------------- 131
EM A P+VVTY +L+ YCR V A+ +L MAE ++
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 132 ------------------PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 173
P + +YN ++ FC + +G+ P TY+
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 174 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 233
+ + E +L+ +++ G SPD LTY +L C G+ + A ++ EM ++
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 234 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
G PD ++T LIH LC L+ +EEA E G+ P + + + +GL+
Sbjct: 455 GIDPD--------LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLR 506
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 11/183 (6%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDS----------ESKKVGEAFQSL-KRLCREGRIPEAE 49
M +N ++N +I G A S++ ES + SL K C+ G +P A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++L++M +G+ TY+ +F NK + L ++I G SP +TY+ ++
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
C + A+ + + M RG+ PD+ + +I C V +GI P
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
Query: 170 ATY 172
T+
Sbjct: 496 ITF 498
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 210/497 (42%), Gaps = 85/497 (17%)
Query: 5 VNIYNGMIRGFATAAGKSDSESKKVGE-----------AFQSL--KRLCREGRIPE-AEQ 50
V +YN M+ G + +GK + V +F +L RL G P A +
Sbjct: 225 VQVYNAMM-GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+L++++ GL D TY++++ + +D A + +M A P + TYN+++ Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R +A + + +G PD A
Sbjct: 344 RCGLAAEAERLFMELELKGFFPD-----------------------------------AV 368
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
TY+SL+ A E+ + +++++M + G DE+TY +++ G+ A L+ +M
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
KG ++G +P +TY LI L +R EA ++ M ++G+ P YS +I
Sbjct: 429 --KG-----LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 291 G-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYS-SVMNDYLAEGNMQR-ALQLDHDMSR 347
G K ++A EDT+ ++ S + D + SVM D L GN R A L DM
Sbjct: 482 GYAKAGKREEA-----EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Query: 348 DGYLSSYVAYSVLINGLHKKART---REAKRDLLYIASDGFLSMPSYTV----------- 393
DG+ SY Y ++I GL K+ R+ ++ RD+ + L + S V
Sbjct: 537 DGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQ 596
Query: 394 YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLL 453
+ + N E +L+ ++ YS S + A + LK G + + L
Sbjct: 597 LKVAITNGYELENDTLLSILGSYSS---SGRHSEAFELLEFLKEHASGSKRL---ITEAL 650
Query: 454 IFEHCRSHNVHKAYNMY 470
I HC+ +N+ A + Y
Sbjct: 651 IVLHCKVNNLSAALDEY 667
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 123/569 (21%), Positives = 212/569 (37%), Gaps = 90/569 (15%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R+ + A ++ E M+ D TY+++I + A L E+ KGF P V
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAE--------------------------------- 127
TYNSL++A+ R + +K + + M +
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 128 RGLS---PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
+GLS PD +Y +I +D GI P TYS+L+ +
Sbjct: 429 KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGK 488
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
EA D F MLR G PD L Y+ +L+ E KA+ L+ +MI G P +
Sbjct: 489 REEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY----- 543
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEM-GLSPDAVCYSTVISGLKIETEDKAIWW 303
Y +I GL +R ++ + +R M E+ G++P + S ++ G + + +
Sbjct: 544 ---TLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGECFDLAARQLKV 599
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
+ Y+ DT S++ Y + G A +L + S + LI
Sbjct: 600 AITNGYE------LENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV- 652
Query: 364 LHKKARTREAKRDLLYIASDGFLSMP--------SYTVYDILLENC-SNSEFKSLVELVK 414
LH K L A D + + P S T+Y+ LL C +N + ++
Sbjct: 653 LHCKVNN-------LSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFS 705
Query: 415 DYSMRDLSDDAA----------------TAHTTMLHLKNKTDGENKTDGGMYNLLIFEHC 458
D + + TAH + + K G + MY +I +
Sbjct: 706 DLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETK--GFHFACSPMYTDIIEAYG 763
Query: 459 RSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDSE 518
+ KA ++ + G P + + +L+SA Y + N +R E
Sbjct: 764 KQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVE 823
Query: 519 QLKVLSE---INVTKSEIYALLDVLAEMA 544
+ +L ++ E+Y +++ L +M
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMG 852
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 8/254 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L R G I E +++ MK G R Y +I C ++ A ++SEM F
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+ +NS++ Y + K V + + + E GL PD +YN +I +C
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ P TY SL+ A ++ L +A LF E+L G+ D Y ++
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G +KA L M + G P + T + L+ +EA ++L + +
Sbjct: 1044 DSGSDSKAEKLLQMMKN--------AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKD 1095
Query: 276 MGLSPDAVCYSTVI 289
+ + YS+VI
Sbjct: 1096 TEVELTTLPYSSVI 1109
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 185/456 (40%), Gaps = 41/456 (8%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF----SPSVVTY 102
EA Q+ ++ G E S++ +C L ++AH ++++ KGF SP Y
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MY 755
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
++ AY ++ KA ++ + + G +PD+ ++N ++S + +
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G P + + L+ ALCV+ RL E + + E+ G + + +L+A G +
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFE 875
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
++ M G+L P I Y +I LC RV +A ++ M E +
Sbjct: 876 VKKIYSSMKAAGYL--------PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVEL 927
Query: 283 VCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRAL 339
+++++ IE K + Y + ++ E TY++++ Y + +
Sbjct: 928 AIWNSMLKMYTAIEDYKKTV-----QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSY--TVYDIL 397
L M G Y LI+ K+ +A++ + S G S+ T+ I
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 398 LENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLH-------------LKNKTDGENK 444
++ S+S+ + L++++K+ + AT H M+ L N D E +
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAG---IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
Query: 445 TDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAP 480
Y+ +I + RS + + +EM G P
Sbjct: 1100 LTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 155/416 (37%), Gaps = 51/416 (12%)
Query: 40 CREGRIPEAEQMLEVMKCKGL-FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ G A Q++ + KG F Y+ +I + A +++ + G +P
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ T+NSL+ AY + ++A I M G SP V+S N ++ C
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 159 XXVDKG--------------------IFPDAATYSS---------------LMEALCVEQ 183
D G IF YSS ++E LC +
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
R+ +A + EM + + +L + ++ K ++ + TG
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE--------TGL 958
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIW 302
P TYN LI C R EE +++ M +GL P Y ++IS K + ++A
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
+E L S+ T + D ++ ++ LQ+ M G + +L+
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM---MKNAGIEPTLATMHLLMV 1075
Query: 363 GLHKKARTREAKRDL--LYIASDGFLSMPSYTVYDILLENCS-NSEFKSLVELVKD 415
+EA++ L L ++P +V D L + NS + L+E+ K+
Sbjct: 1076 SYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 127/331 (38%), Gaps = 68/331 (20%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
F + Y+ ++EA ++ +A + + + G +PD T+ L++A G + +A
Sbjct: 749 FACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARA 808
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+ + M+ G P SP + + N L+H LC R+EE ++ + +MG +
Sbjct: 809 IFNTMMRDG--P------SPTVESINILLHALCVDGRLEELYVVVEELQDMGFK---ISK 857
Query: 286 STVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 345
S+++ LM ++ + GN+ ++ M
Sbjct: 858 SSIL----------------------LM------------LDAFARAGNIFEVKKIYSSM 883
Query: 346 SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 405
GYL + Y ++I L K R R+A +I++ +
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDA---------------------EIMVSEMEEAN 922
Query: 406 FKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHK 465
FK VEL SM + T+ + + + D YN LI +CR +
Sbjct: 923 FK--VELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 466 AYNMYMEMVHYGHAPHMFSVLALISALDDDR 496
Y + +M + G P + + +LISA +
Sbjct: 981 GYLLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 176/404 (43%), Gaps = 46/404 (11%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A+ + ++ +G L+ Y+S++ N +D + +L+EM+ +G SP+ T N+ +
Sbjct: 341 ADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALC 400
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
+C+ VD+A+ + R+ +E G +P SYN +I C +D+G F
Sbjct: 401 FFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFL 460
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
T+S+L ALC + + A +L + P + ++++A C VG+ A +
Sbjct: 461 GGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMI- 519
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
+E+ +K +G + + +LI+G L R + A +++ M E G +P Y
Sbjct: 520 NELFNK-------SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRN 572
Query: 288 VISGL-KIETEDK-----------AIWWLDEDTYD-------------------SLMDSL 316
VI + ++E+ +K ++W Y+ +MD
Sbjct: 573 VIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRD 632
Query: 317 SYEDTYSS---VMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
T +S ++ YL + AL HD+ G + Y V+I GL K + +A
Sbjct: 633 GITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDA 691
Query: 374 KRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDY 416
L + +G PS Y++ ++ C+ ++ V LV ++
Sbjct: 692 MHFLEEMKGEGL--QPSIECYEVNIQKLCNEEKYDEAVGLVNEF 733
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/522 (22%), Positives = 196/522 (37%), Gaps = 89/522 (17%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGW----FCNLNKIDSAHTLLSE-- 89
+K+ C++G++ EAE L + L D S +G C+ K A LL E
Sbjct: 258 VKKFCKQGKLDEAEDYLRAL----LPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIK 313
Query: 90 -----------------MIAKGF-----------SP------SVVTYNSLVFAYCRRDSV 115
+I GF SP V YNS+VF + +++
Sbjct: 314 LVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNL 373
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
D IL M RG+SP+ + N + FC + G P A +Y+ L
Sbjct: 374 DGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYL 433
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ LC + + +A+D+ + + G T++ L NA C G+ A L +
Sbjct: 434 IHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDL 493
Query: 236 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG---- 291
LP + G +I LC + +VE+AL I + G+ ++++I G
Sbjct: 494 LPKRIAGCK--------IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITL 545
Query: 292 LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
++ + K I + E Y + SL Y + V E N L L +S +
Sbjct: 546 MRGDIAAKLIIRMQEKGY-TPTRSL-YRNVIQCVCEMESGEKNFFTTL-LKFQLSL--WE 600
Query: 352 SSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT--VYDILLENCSNSEFKSL 409
AY++ I G GF P VYD++ + S
Sbjct: 601 HKVQAYNLFIEGA-------------------GFAGKPKLARLVYDMMDRDGITPTVASN 641
Query: 410 VELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNM 469
+ +++ Y + DA LH + + KT +Y ++I C+++ + A +
Sbjct: 642 ILMLQSYLKNEKIADA-------LHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHF 694
Query: 470 YMEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRS 511
EM G P + I L ++ Y+E ++N +S
Sbjct: 695 LEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKS 736
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 15/270 (5%)
Query: 11 MIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSV 70
M R AA + D K++ + + LC G++ +A + E+ G+ + ++S+
Sbjct: 480 MARELVIAAAERDLLPKRIA-GCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSL 538
Query: 71 IGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGL 130
I L + D A L+ M KG++P+ Y +++ C +S +K + + L
Sbjct: 539 IYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEK--NFFTTLLKFQL 596
Query: 131 S---PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 187
S V +YN I GI P A+ ++++ +++++
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 188 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
A F ++ G + L Y ++ C + A H +EM KG G P+I
Sbjct: 657 ALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEM--KG------EGLQPSI 707
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMG 277
Y I LC ++ +EA+ ++ + G
Sbjct: 708 ECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 40/393 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L RE + A ++L+ + + LD R Y++++ + K + A L M G SP+
Sbjct: 185 LGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT 244
Query: 99 VVTYNSL--VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
+VTYN + VF R S K +G+L M +GL D + + V+S
Sbjct: 245 LVTYNVILDVFGKMGR-SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
G P TY++L++ +EA + +EM D +TY L+ A
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVT---------------------------GFSPAIVT 249
G +A + + M KG +P+ +T G P T
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTY 309
YNA++ L R E +++L M G SP+ ++T+++ + DK + + +
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE-- 481
Query: 310 DSLMDSLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
M S +E DT++++++ Y G+ A ++ +M+R G+ + Y+ L+N L +
Sbjct: 482 ---MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 367 KARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
K R + + + S GF P+ T Y ++L+
Sbjct: 539 KGDWRSGENVISDMKSKGF--KPTETSYSLMLQ 569
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 190/483 (39%), Gaps = 34/483 (7%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
REG + EA++ +K G TY++++ F A ++L EM V
Sbjct: 293 REGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TYN LV AY R +A G++ M ++G+ P+ +Y VI +
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ G P+ TY++++ L + R +E + +M G SP+ T+ +L C G
Sbjct: 413 KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG-- 470
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
D+ +++ F GF P T+N LI +A ++ M G +
Sbjct: 471 ------MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 281 DAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQR 337
Y+ +++ L + + W + S M S + E +YS ++ Y GN
Sbjct: 525 CVTTYNALLNALARKGD-----WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
++++ + S++ L+ K ++R G+ P +++ +
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY--KPDMVIFNSM 637
Query: 398 LENCSNSEFKSLVELVKDYSMRD--LSDDAATAHTTMLH-------------LKNKTDGE 442
L + + E + + S+R+ LS D T ++ M LK +
Sbjct: 638 LSIFTRNNMYDQAEGILE-SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 443 NKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMS 502
K D YN +I CR + +A M EM G P +F+ +S M+ E+
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 503 WVI 505
VI
Sbjct: 757 DVI 759
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
+E+ + K G D ++S++ F N D A +L + G SP +VTYNSL+
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
Y RR KA IL+ + + L PD+ SYN VI FC ++GI P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
TY++ + +E D+ M + P+ELT+ +++ C G++++A
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Query: 228 DEMIHKGFLPDF 239
++ K F P F
Sbjct: 795 SKI--KTFDPCF 804
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 126/335 (37%), Gaps = 32/335 (9%)
Query: 6 NIYNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLE 53
+ +N +I + + D+ SK GE ++ L L R+G E ++
Sbjct: 492 DTFNTLISAYGRCGSEVDA-SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 54 VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD 113
MK KG E +YS ++ + + + + PS + +L+ A +
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 114 SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 173
++ + + G PD+ +N ++S F + G+ PD TY+
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 174 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 233
SLM+ +A ++ + + + + PD ++Y ++ C G +A + EM +
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 234 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
G P I TYN + G + E +++ M + P+ + + V+ G
Sbjct: 731 GI--------RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG-- 780
Query: 294 IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMND 328
+ Y MD +S T+ +D
Sbjct: 781 ---------YCRAGKYSEAMDFVSKIKTFDPCFDD 806
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 8/259 (3%)
Query: 34 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
Q L LC + + A++ K G+ +TYS ++ + + A + EM+ +
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
++ YN+L+ A C+ VD + + M GL PD S+ I +C
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
+ P+ T++ +++ LC +++ +A+ L EM++ G +PD TY ++
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C E +A L M LPD TYN ++ L + R + A EI GM
Sbjct: 358 HCDHCEVNRATKLLSRMDRTKCLPD--------RHTYNMVLKLLIRIGRFDRATEIWEGM 409
Query: 274 PEMGLSPDAVCYSTVISGL 292
E P Y+ +I GL
Sbjct: 410 SERKFYPTVATYTVMIHGL 428
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 17/266 (6%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A ++ + M + +D Y++++ C +D + + EM G P ++ +
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
AYC V A +L M L P+V ++N +I C + KG P
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP 346
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D TY+S+M C ++ A L M R PD TY +L +G F +A +
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPDAVCYS 286
+ M + F P + TY +IHGL ++EEA M + G+ P YS
Sbjct: 407 EGMSERKFY--------PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP----YS 454
Query: 287 TVISGLKIETEDKAIWWLDEDTYDSL 312
T + L+ ++ + W D D L
Sbjct: 455 TTVEMLR----NRLVGWGQMDVVDVL 476
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 145/343 (42%), Gaps = 27/343 (7%)
Query: 68 SSVIGW-----FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
SS + W + N A + M+ G P V + L+ + C + V+ A
Sbjct: 137 SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFF 196
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
G+ P +Y+ ++ + +++ D Y++L++ALC
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ + +F+EM G+ PD ++ ++A C G+ A+ + D M +P+
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN---- 312
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS----GLKIETED 298
+ T+N +I LC ++V++A +L M + G +PD Y+++++ ++
Sbjct: 313 ----VYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRAT 368
Query: 299 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
K + +D L TY+ V+ + G RA ++ MS + + Y+
Sbjct: 369 KLLSRMDR------TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYT 422
Query: 359 VLINGL-HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 400
V+I+GL KK + EA R + +G +P Y+ +L N
Sbjct: 423 VMIHGLVRKKGKLEEACRYFEMMIDEG---IPPYSTTVEMLRN 462
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C G + A ++L+ MK L + T++ +I C K+D A+ LL EMI KG +P
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
TYNS++ +C V++A +L M PD +YN V+
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 160 XVDKGIFPDAATYSSLMEALCVEQ-RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
++ +P ATY+ ++ L ++ +L EA F M+ G+ P T L N LVG
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNR--LVG 466
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 16/348 (4%)
Query: 44 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
R E Q+ + M + F++E+TY ++ + +K+D A + G +V ++
Sbjct: 158 RFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFH 217
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
L+ CR V+ A + R D+ + N +++ +C +
Sbjct: 218 GLLMWLCRYKHVEFAETLF-CSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIAS 276
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
PD +Y +++ AL + +L +A +L+R M +PD +++A C +A
Sbjct: 277 KCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEA 336
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG--LSPD 281
+ E+ KG PD P +VTYN+L+ LC + R E+ E++ M G SP+
Sbjct: 337 LEVFREISEKG--PD------PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPN 388
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
V +S + LK K + + E + + S D Y+ + Y+ ++ ++
Sbjct: 389 DVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTS--DLYNLMFRLYVQWDKEEKVREI 443
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
+M R G Y++ I+GLH K + EA + S G + P
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 122/320 (38%), Gaps = 44/320 (13%)
Query: 10 GMIRGFATAAGKSDSESKKVGEAFQS-----LKRLCREGRIPEAEQMLEVMKCKGLFLDE 64
G +R F D SK+ G + L R ++ EA + E K G+ D
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDL 213
Query: 65 RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 124
+ ++ W C ++ A TL + F + N ++ +C +V +A +
Sbjct: 214 VAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKD 272
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
+ PDV SY +I+ D PD +++++ALC ++R
Sbjct: 273 IIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKR 332
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
+ EA ++FRE+ G P+ +TY LL C + K + L +EM KG S
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG------GSCS 386
Query: 245 PAIVTYNAL---------------------------IHGLCF-----LDRVEEALEILRG 272
P VT++ L ++ L F D+ E+ EI
Sbjct: 387 PNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSE 446
Query: 273 MPEMGLSPDAVCYSTVISGL 292
M GL PD Y+ I GL
Sbjct: 447 MERSGLGPDQRTYTIRIHGL 466
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG--FS 96
LC + RIPEA ++ + KG + TY+S++ C + + + L+ EM KG S
Sbjct: 327 LCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCS 386
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P+ VT++ L+ R VD +L MA+ D YN + +
Sbjct: 387 PNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREI 443
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELT 206
G+ PD TY+ + L + ++ EA F+EM+ G+ P+ T
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 159/397 (40%), Gaps = 74/397 (18%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G D TY++++G + + + LL EM+ G P+ VTYN L+ +Y R + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ + M E G PD RV TY +L++
Sbjct: 419 MNVFNQMQEAGCKPD-----RV------------------------------TYCTLIDI 443
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
L A D+++ M GG+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL------ 292
+VTYN ++ + AL++ R M G PD V YS V+ L
Sbjct: 504 --------LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 293 ----KIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 347
+ TE + W DE Y L+D + GN+++A Q M
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDL-------------WGKAGNVEKAWQWYQAMLH 602
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 407
G + + L++ + + EA L + + G PS Y +LL C++ K
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRSK 660
Query: 408 SLVELVKDYSMRDLSDDAATAHTTMLHLKNK-TDGEN 443
L + + ++ AH +L + DGEN
Sbjct: 661 ----LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R + EA + M+ G D TY ++I +D A + M A G SP
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ ++ + + A + M ++G +P++ +YN ++
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ G PD TYS +ME L L EA +F EM + PDE Y L++ G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
KA+ + M+H G P+ + T N+L+ ++++ EA E+L+ M +GL P
Sbjct: 591 EKAWQWYQAMLHAGLRPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 281 DAVCYSTVIS 290
Y+ ++S
Sbjct: 643 SLQTYTLLLS 652
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 36/207 (17%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A M + M+ GL D TYS +I + +AH L EM+ +G +P++VTYN ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK---- 163
+ + + A+ + R M G PD +Y+ V+ K
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 164 -------------------------------GIFPDAATYSSLMEALCVEQRLSEAFDLF 192
G+ P+ T +SL+ +++EA++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 193 REMLRGGVSPDELTYTRLLNACCLVGE 219
+ ML G+ P TYT LL +CC G
Sbjct: 633 QNMLALGLRPSLQTYTLLL-SCCTDGR 658
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 159/397 (40%), Gaps = 74/397 (18%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G D TY++++G + + + LL EM+ G P+ VTYN L+ +Y R + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ + M E G PD RV TY +L++
Sbjct: 419 MNVFNQMQEAGCKPD-----RV------------------------------TYCTLIDI 443
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
L A D+++ M GG+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL------ 292
+VTYN ++ + AL++ R M G PD V YS V+ L
Sbjct: 504 --------LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 293 ----KIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 347
+ TE + W DE Y L+D + GN+++A Q M
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDL-------------WGKAGNVEKAWQWYQAMLH 602
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 407
G + + L++ + + EA L + + G PS Y +LL C++ K
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRSK 660
Query: 408 SLVELVKDYSMRDLSDDAATAHTTMLHLKNK-TDGEN 443
L + + ++ AH +L + DGEN
Sbjct: 661 ----LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R + EA + M+ G D TY ++I +D A + M A G SP
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ ++ + + A + M ++G +P++ +YN ++
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ G PD TYS +ME L L EA +F EM + PDE Y L++ G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
KA+ + M+H G P+ + T N+L+ ++++ EA E+L+ M +GL P
Sbjct: 591 EKAWQWYQAMLHAGLRPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 281 DAVCYSTVIS 290
Y+ ++S
Sbjct: 643 SLQTYTLLLS 652
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 36/207 (17%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A M + M+ GL D TYS +I + +AH L EM+ +G +P++VTYN ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK---- 163
+ + + A+ + R M G PD +Y+ V+ K
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 164 -------------------------------GIFPDAATYSSLMEALCVEQRLSEAFDLF 192
G+ P+ T +SL+ +++EA++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 193 REMLRGGVSPDELTYTRLLNACCLVGE 219
+ ML G+ P TYT LL +CC G
Sbjct: 633 QNMLALGLRPSLQTYTLLL-SCCTDGR 658
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 159/397 (40%), Gaps = 74/397 (18%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G D TY++++G + + + LL EM+ G P+ VTYN L+ +Y R + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ + M E G PD RV TY +L++
Sbjct: 419 MNVFNQMQEAGCKPD-----RV------------------------------TYCTLIDI 443
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
L A D+++ M GG+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL------ 292
+VTYN ++ + AL++ R M G PD V YS V+ L
Sbjct: 504 --------LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYL 555
Query: 293 ----KIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 347
+ TE + W DE Y L+D + GN+++A Q M
Sbjct: 556 EEAEAVFTEMQQKNWIPDEPVYGLLVDL-------------WGKAGNVEKAWQWYQAMLH 602
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFK 407
G + + L++ + + EA L + + G PS Y +LL C++ K
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL--RPSLQTYTLLLSCCTDGRSK 660
Query: 408 SLVELVKDYSMRDLSDDAATAHTTMLHLKNK-TDGEN 443
L + + ++ AH +L + DGEN
Sbjct: 661 ----LDMGFCGQLMASTGHPAHMFLLKMPAAGPDGEN 693
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 8/250 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R + EA + M+ G D TY ++I +D A + M A G SP
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ ++ + + A + M ++G +P++ +YN ++
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ G PD TYS +ME L L EA +F EM + PDE Y L++ G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
KA+ + M+H G P+ + T N+L+ ++++ EA E+L+ M +GL P
Sbjct: 591 EKAWQWYQAMLHAGLRPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 281 DAVCYSTVIS 290
Y+ ++S
Sbjct: 643 SLQTYTLLLS 652
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 36/207 (17%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A M + M+ GL D TYS +I + +AH L EM+ +G +P++VTYN ++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK---- 163
+ + + A+ + R M G PD +Y+ V+ K
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 164 -------------------------------GIFPDAATYSSLMEALCVEQRLSEAFDLF 192
G+ P+ T +SL+ +++EA++L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 193 REMLRGGVSPDELTYTRLLNACCLVGE 219
+ ML G+ P TYT LL +CC G
Sbjct: 633 QNMLALGLRPSLQTYTLLL-SCCTDGR 658
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 9/266 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+E +P+A ++ M G D TYS ++ C ++D A ++ M P+
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
Y+ LV Y + +++AV M G+ DV +N +I FC
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
KG+ P++ + + ++ L EAFD+FR+M++ PD TYT ++ C E
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEM 427
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
A + M KG P++ T++ LI+GLC ++A +L M EMG+ P
Sbjct: 428 ETADKVWKYMRKKGVF--------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 281 DAVCYSTVISGLKIETEDKAIWWLDE 306
V + + L E + + +L+E
Sbjct: 480 SGVTFGRLRQLLIKEEREDVLKFLNE 505
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 18/319 (5%)
Query: 58 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 117
K L+ T+ V+ + K+D A + M P++V +N L+ A C+ +V K
Sbjct: 162 KKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRK 221
Query: 118 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
A + M +R +PD +Y+ ++ + +D G PD TYS +++
Sbjct: 222 AQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
LC R+ EA + R M P Y+ L++ +A EM G
Sbjct: 281 ILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 238 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE 297
D + +N+LI C +R++ +L+ M G++P++ + ++ L IE
Sbjct: 341 D--------VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL-IERG 391
Query: 298 DKAIWWLDE--DTYDSLMDSLSYE-DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
+K DE D + ++ + DTY+ V+ + + M+ A ++ M + G S
Sbjct: 392 EK-----DEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSM 446
Query: 355 VAYSVLINGLHKKARTREA 373
+SVLINGL ++ T++A
Sbjct: 447 HTFSVLINGLCEERTTQKA 465
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 138/339 (40%), Gaps = 57/339 (16%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKG 94
L LC+ + +A+++ E M+ + D +TYS ++ GW N + A + EMI G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN-LPKAREVFREMIDAG 267
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P +VTY+ +V C+ VD+A+GI+R+M P + C
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSM-----DPSI----------CK-------- 304
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
P YS L+ E RL EA D F EM R G+ D + L+ A
Sbjct: 305 ------------PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C + + EM KG P+ + N ++ L +EA ++ R M
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSC--------NIILRHLIERGEKDEAFDVFRKMI 404
Query: 275 EMGLSPDAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 330
++ PDA Y+ VI ++ET DK +W Y T+S ++N
Sbjct: 405 KV-CEPDADTYTMVIKMFCEKKEMETADK-VW-----KYMRKKGVFPSMHTFSVLINGLC 457
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
E Q+A L +M G S V + L L K+ R
Sbjct: 458 EERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D TY+ +I D A L EM+ K P+ VT+ +L+ C+ V +A+ +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 123 RAMAE-RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
M + G+ P V Y +I C + I DAA YS+L+ +L
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
R +E + EM G PD +TY L+N C+ + A + DEM+ KG PD
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD--- 327
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL--KIETEDK 299
+++YN ++ + + EEA + MP G SPD + Y V GL ++ E+
Sbjct: 328 -----VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 300 AIWWLDE 306
A+ LDE
Sbjct: 383 AV-ILDE 388
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 25/299 (8%)
Query: 8 YNGMIRGFATAAGKSDS----------ESKKVGEAFQSLKR-LCREGRIPEAEQML-EVM 55
YN +I G + + D+ + K G F +L LC++ R+ EA +M +++
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
K G+ Y+S+I C + ++ A L E Y++L+ + +
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
++ IL M+E+G PD +YN +I+ FC V+KG+ PD +Y+ +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ ++ EA LF +M R G SPD L+Y + + C +F +A + DEM+ KG+
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 236 LP--DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
P D + GF + LC ++E +++ + G++ DA +S +I +
Sbjct: 395 KPRRDRLEGF----------LQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMIPTM 442
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 108/262 (41%), Gaps = 19/262 (7%)
Query: 120 GILRAMAERGLS------PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 173
G L M ER S PD +YN +I V K + P T+
Sbjct: 132 GELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 174 SLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
+L+ LC + R+ EA + +ML+ GV P Y L+ A C +GE + AF L DE
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
D Y+ LI L R E IL M E G PD V Y+ +I+G
Sbjct: 252 GKIKVD--------AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
Query: 293 KIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
+E + + A LDE L + +Y+ ++ + + A L DM R G
Sbjct: 304 CVENDSESANRVLDEMVEKGLKPDVI---SYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 352 SSYVAYSVLINGLHKKARTREA 373
++Y ++ +GL + + EA
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEA 382
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 202 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD 261
PD TY L++ C G F A L DEM+ K P TG VT+ LIHGLC
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP---TG-----VTFGTLIHGLCKDS 201
Query: 262 RVEEALEILRGMPEM-GLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED 320
RV+EAL++ M ++ G+ P Y+++I L E + L ++ Y+ + +
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA-- 259
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYI 380
YS++++ + G + +MS G V Y+VLING + + A R L +
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 381 ASDGFLSMPSYTVYDILL 398
G P Y+++L
Sbjct: 320 VEKGL--KPDVISYNMIL 335
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 90/234 (38%), Gaps = 45/234 (19%)
Query: 4 NVNIYNGMIRG--------FATAAGKSDSESK-KVGEAFQS--LKRLCREGRIPEAEQML 52
V+IY +I+ FA E K KV A S + L + GR E +L
Sbjct: 222 TVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMIL 281
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E M KG D TY+ +I FC N +SA+ +L EM+ KG P V++YN ++ + R
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRI 341
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP----- 167
++A + M RG SPD SY V C + KG P
Sbjct: 342 KKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRL 401
Query: 168 -----------------------------DAATYSSLMEALCVEQRLSEAFDLF 192
DA +S ++ +C E +S++ DL
Sbjct: 402 EGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 153/388 (39%), Gaps = 76/388 (19%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
Q+ VM G+ + T++ + FCN + L +M +GF P +VTYN+LV +Y
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
CRR + +A + + M R + PD+ +Y +I C VD+GI PD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT----------RLLNAC----- 214
+Y++L+ A C E + ++ L EML V PD T RLL+A
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 215 --------------------CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 254
C G+ A HL D +I + G TYN LI
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEE-------EGHEAKPETYNNLI 454
Query: 255 HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL---------------KIETEDK 299
L D +EEAL + + DA Y +I L ++E K
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 300 AIWW------------LDEDTYDSLMDSLSYE------DTYSSVMNDYLAEG-NMQRALQ 340
+ LD D + L+ + E ++Y+S++ G ++AL+
Sbjct: 515 PDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALE 574
Query: 341 LDHDMSRDGYLSSYVAYSVLINGLHKKA 368
L M R G++ + + LI L + +
Sbjct: 575 LQERMQRLGFVPNRLTCKYLIQVLEQPS 602
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 33/299 (11%)
Query: 88 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 147
S M G P+ T+N L +C + + L M E G PD+ +YN ++S +C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
+ + PD TY+SL++ LC + R+ EA F M+ G+ PD ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 208 TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL 267
L+ A C G ++ L EM+ +PD T ++ G R+ A+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC--------KVIVEGFVREGRLLSAV 396
Query: 268 EILRGMPEMGLS-PDAVCYSTVISGLKIETEDKAIWWLDE-----------DTYDSLMDS 315
+ + + + P VC ++S + A LD +TY++L++S
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES 456
Query: 316 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
LS D ++ AL L + + Y LI L + R REA+
Sbjct: 457 LSRCDA-------------IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAE 502
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D + ++ + L ++ + E++ GFS SVVT N L+ + D ++ +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M G+ P+ ++N + + FC ++G PD TY++L+ + C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
RL EAF L++ M R V PD +TYT L+ C G +A M+ +G PD
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD---- 340
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
++YN LI+ C ++++ ++L M + PD ++ G
Sbjct: 341 ----CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 164/431 (38%), Gaps = 74/431 (17%)
Query: 79 KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN 138
++D L+S + P V ++ LV Y + V++ + R + + G S V + N
Sbjct: 148 EVDVFRVLVSATDECNWDP--VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCN 205
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+++ GI P+ T++ L C + E D +M
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEE 265
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G PD +TY L+++ C G +AF+L+ M + +PD +VTY +LI GLC
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD--------LVTYTSLIKGLC 317
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY 318
RV EA + M + G+ PD + Y+T+I
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA--------------------------- 350
Query: 319 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR--------- 369
Y EG MQ++ +L H+M + + V++ G ++ R
Sbjct: 351 ----------YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 370 -TREAKRDLLY---------IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
R K D+ + + +G + + I+ E ++ ++ L++ S
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 420 DLSDDAATAHTTMLHLKNKTDGENKT-DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGH 478
D ++A L LK K +N+ D Y LI CR +A ++ EM
Sbjct: 461 DAIEEA-------LVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEV 513
Query: 479 APHMFSVLALI 489
P F AL+
Sbjct: 514 KPDSFICGALV 524
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ L R I EA + +K + LD +TY ++IG C + + A +L++EM
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEV 513
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P +LV+ YC+ DKA +L A D +SYN ++ C
Sbjct: 514 KPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKAL 573
Query: 156 XXXXXVDK-GIFPDAATYSSLMEAL 179
+ + G P+ T L++ L
Sbjct: 574 ELQERMQRLGFVPNRLTCKYLIQVL 598
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 18/266 (6%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
++ ++ C + LL M + P T+N L F +CR KA+ +L M
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF---PDAATYSSLMEALCVEQ 183
E G P+ +Y I FC + KG P A T++ ++ AL
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND 355
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
+ E F+L M+ G PD TY ++ C+ + +A+ DEM +KG+ PD
Sbjct: 356 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD----- 410
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAI- 301
IVTYN + LC + +EAL++ M E +P Y+ +IS +++ D A
Sbjct: 411 ---IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 302 WWLDEDTYDSLMDSLSYEDTYSSVMN 327
W + D D + D +TY +++N
Sbjct: 468 TWTEMDKRDCVQDV----ETYCAMIN 489
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 22/309 (7%)
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P + +N L+ A C+ V + +LR M R + PD +++N + +C
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG---VSPDELTYTRLLN 212
++ G P+ TY + ++ C + EA DLF M+ G +P T+ ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
A + + F L MI G LPD + TY +I G+C ++V+EA + L
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPD--------VSTYKDVIEGMCMAEKVDEAYKFLDE 401
Query: 273 MPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYE--DTYSSVMNDY 329
M G PD V Y+ + L + D+A+ Y +++S TY+ +++ +
Sbjct: 402 MSNKGYPPDIVTYNCFLRVLCENRKTDEAL-----KLYGRMVESRCAPSVQTYNMLISMF 456
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
+ A +M + + Y +INGL R +EA L + + G L +P
Sbjct: 457 FEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG-LKLP 515
Query: 390 SYTVYDILL 398
Y V+D L
Sbjct: 516 -YRVFDSFL 523
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 1/197 (0%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + + E +++ M G D TY VI C K+D A+ L EM KG+ P
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+VTYN + C D+A+ + M E +P V +YN +IS F
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ D TY +++ L R EA L E++ G+ + L VG
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Query: 219 EFTKAFHLHDEMIHKGF 235
KA H E + K +
Sbjct: 531 NL-KAIHKVSEHMKKFY 546
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 110/301 (36%), Gaps = 63/301 (20%)
Query: 115 VDKAVGILRAMAERGLS----------------PDVDSYNRVISKFCXXXXXXXXXXXXX 158
VD + ILR ER L+ P+++++N ++ C
Sbjct: 199 VDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLR 258
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ + PDA T++ L C + +A L EM+ G P+ TY ++ C G
Sbjct: 259 RMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+A L D MI KG +P T+ +I L D+ EE E++ M G
Sbjct: 318 MVDEAADLFDFMITKG-----SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 279 SPDAVCYSTVISGLKI-ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
PD Y VI G+ + E D+A +LDE
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDE------------------------------- 401
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
MS GY V Y+ + L + +T EA + LY PS Y++L
Sbjct: 402 -------MSNKGYPPDIVTYNCFLRVLCENRKTDEALK--LYGRMVESRCAPSVQTYNML 452
Query: 398 L 398
+
Sbjct: 453 I 453
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 4/203 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDE---RTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
C+ G + EA + + M KG + +T++ +I +K + L+ MI+ G
Sbjct: 313 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V TY ++ C + VD+A L M+ +G PD+ +YN + C
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 432
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
V+ P TY+ L+ AF+ + EM + D TY ++N
Sbjct: 433 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 492
Query: 216 LVGEFTKAFHLHDEMIHKGF-LP 237
+A L +E+++KG LP
Sbjct: 493 DCHRAKEACFLLEEVVNKGLKLP 515
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 157/360 (43%), Gaps = 19/360 (5%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
GR A ++ + MK + E+ Y++++G + + K++ A L EM G SP+V TY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
L+ + VD+A G + M GL+PDV N +++
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 163 KGIFPDAATYSSLMEALCVEQ-RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
P +Y+++++AL + +SE F +M VSP E TY+ L++ C
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
KA L +EM KGF P PA Y +LI+ L R E A E+ + + E +
Sbjct: 427 KALLLLEEMDEKGFPP------CPA--AYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 282 AVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYEDTYS--SVMNDYLAEGNMQRA 338
+ Y+ +I K +A+ D ++ + + S D Y+ ++M+ + G + A
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAV-----DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
L M +G + ++++++NG + R A I G P Y+ LL
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI--KPDGVTYNTLL 591
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 166/396 (41%), Gaps = 25/396 (6%)
Query: 5 VNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCR---------------EGRIPEAE 49
V++ ++ A G++ SK + +Q+ R C+ EG+ +
Sbjct: 158 VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 50 QMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
++ M +G F D TYS++I + L + DSA L EM P+ Y +L+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
Y + V+KA+ + M G SP V +Y +I + G+ PD
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
++LM L R+ E ++F EM +P ++Y ++ A F H+ +
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL-----FESKAHVSE 392
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV 288
+ F SP+ TY+ LI G C +RVE+AL +L M E G P Y ++
Sbjct: 393 --VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 289 ISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
I+ L +A L ++ ++ + S Y+ ++ + G + A+ L ++M
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSS--RVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 384
G AY+ L++G+ K EA L + +G
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 8/251 (3%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
+ + E + MK + E TYS +I +C N+++ A LL EM KGF P
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
Y SL+ A + + A + + + E + Y +I F
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK 506
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
++G PD Y++LM + ++EA L R+M G D ++ +LN G
Sbjct: 507 NQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+A + + + H G PD VTYN L+ EEA ++R M + G D
Sbjct: 567 RAIEMFETIKHSGIKPDG--------VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 282 AVCYSTVISGL 292
A+ YS+++ +
Sbjct: 619 AITYSSILDAV 629
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + R A ++ + +K + R Y+ +I F K+ A L +EM +G P
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V YN+L+ + +++A +LR M E G D++S+N +++ F
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
GI PD TY++L+ EA + REM G D +TY+ +L+A
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 141/358 (39%), Gaps = 69/358 (19%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G D TY++++G + + LL EM+ G P+ VTYN L+ +Y R + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ + M E G PD RV TY +L++
Sbjct: 414 MNVFNQMQEAGCEPD-----RV------------------------------TYCTLIDI 438
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
L A D+++ M G+SPD TY+ ++N G A L EM+ +G P+
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS-----GLK 293
+VT+N +I E AL++ R M G PD V YS V+ G
Sbjct: 499 --------LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL 550
Query: 294 IETE------DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 347
E E + W DE Y L+D + GN+ +A Q M +
Sbjct: 551 EEAEGVFAEMQRKNWVPDEPVYGLLVDL-------------WGKAGNVDKAWQWYQAMLQ 597
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 405
G + + L++ + R EA L + + G PS Y +LL C+++
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL--HPSLQTYTLLLSCCTDAR 653
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 29/280 (10%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L R + E ++L+ M G + TY+ +I + N + A + ++M G P
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPD 428
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
VTY +L+ + + +D A+ + + M E GLSPD +Y+ +I+
Sbjct: 429 RVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFC 488
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSE-AFDLFREMLRGGVSPDELTYTRLLNACCLV 217
V +G P+ T+ ++M AL + R E A L+R+M G PD++TY+ ++
Sbjct: 489 EMVGQGCTPNLVTF-NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 218 GEFTKAFHLHDEMIHKGFLPD---------------------------FVTGFSPAIVTY 250
G +A + EM K ++PD G P + T
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC 607
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
N+L+ + R+ EA +L+ M +GL P Y+ ++S
Sbjct: 608 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 129/317 (40%), Gaps = 36/317 (11%)
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G D TYT ++ +F + L DEM+ G P+ VTYN LIH
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPN--------TVTYNRLIHSYG 405
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLD--EDTYDSLMDSL 316
+ ++EA+ + M E G PD V Y T+I + KA +LD D Y + ++
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLI-----DIHAKA-GFLDIAMDMYQRMQEAG 459
Query: 317 SYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
DT YS ++N G++ A +L +M G + V ++++I LH KAR E
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYETA 518
Query: 375 RDLLY-IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTML 433
L + + GF P Y I++E + F E V R + ++
Sbjct: 519 LKLYRDMQNAGF--QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 434 HLKNKTDGENKT--------DGGMY------NLLIFEHCRSHNVHKAYNMYMEMVHYGHA 479
L K +K G+ N L+ R H + +AYN+ M+ G
Sbjct: 577 DLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLH 636
Query: 480 PHMFSVLALISALDDDR 496
P + + L+S D R
Sbjct: 637 PSLQTYTLLLSCCTDAR 653
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 35/202 (17%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A M + M+ GL D TYS +I + +AH L EM+ +G +P++VT+N ++
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKF--CXXXXXXXXXXX--------- 156
+ + + + A+ + R M G PD +Y+ V+ C
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 157 -------------XXXXVDK-----------GIFPDAATYSSLMEALCVEQRLSEAFDLF 192
VDK G+ P+ T +SL+ R+SEA++L
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 193 REMLRGGVSPDELTYTRLLNAC 214
+ ML G+ P TYT LL+ C
Sbjct: 628 QSMLALGLHPSLQTYTLLLSCC 649
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 19/341 (5%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
+E Y+ +I +D + EM ++G S SV +Y +L+ AY R + ++ +L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD-KGIFPDAATYSSLMEALCV 181
M +SP + +YN VI+ + +GI PD TY++L+ A +
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
EA +FR M GG+ PD TY+ L+ + K L EM G LPD
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD--- 316
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS--GLKIETEDK 299
I +YN L+ ++EA+ + M G +P+A YS +++ G +D
Sbjct: 317 -----ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 300 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGN-MQRALQLDHDMSRDGYLSSYVAYS 358
+L+ + ++ D+ +Y +++ + EG + + L HDM + Y
Sbjct: 372 RQLFLEMKSSNTDPDAATY-----NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 359 VLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
+I K +A++ L Y+ ++ + PS Y ++E
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIV--PSSKAYTGVIE 465
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 11/253 (4%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L REG + + ++ + M +G+ +Y+++I + + +++ LL M + SPS
Sbjct: 151 LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPS 210
Query: 99 VVTYNSLVFAYCRRDSVD--KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
++TYN+++ A C R +D +G+ M G+ PD+ +YN ++S
Sbjct: 211 ILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
D GI PD TYS L+E +RL + DL EM GG PD +Y LL A
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
G +A + +M G +P TY+ L++ R ++ ++ M
Sbjct: 330 SGSIKEAMGVFHQMQ--------AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 277 GLSPDAVCYSTVI 289
PDA Y+ +I
Sbjct: 382 NTDPDAATYNILI 394
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 130/308 (42%), Gaps = 24/308 (7%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
EAE + M G+ D TYS ++ F L +++ LL EM + G P + +YN L+
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
AY + S+ +A+G+ M G +P+ ++Y+ +++ F
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
PDAATY+ L+E E LF +M+ + PD TY ++ AC G A +
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD----- 281
M D V P+ Y +I EEAL M E+G +P
Sbjct: 445 LQYMTAN----DIV----PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRAL 339
++ YS GL E+E AI L+DS DT+++ + Y G + A+
Sbjct: 497 SLLYSFARGGLVKESE--AI-------LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 340 QLDHDMSR 347
+ DM +
Sbjct: 548 KTYVDMEK 555
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
P+ Y+ ++ L E L + ++F EM GVS +YT L+NA G + + L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 227 HDEMIHKGFLPDFVT----------------------------GFSPAIVTYNALIHGLC 258
D M ++ P +T G P IVTYN L+
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLS 317
+EA + R M + G+ PD YS ++ K+ +K L E + ++
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 318 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 377
+Y+ ++ Y G+++ A+ + H M G + YSVL+N + R + ++
Sbjct: 319 ---SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 378 LYIASDGFLSMPSYTVYDILLENCSNSE-FKSLVELVKDYSMRDLSDDAAT 427
L + S + P Y+IL+E FK +V L D ++ D T
Sbjct: 376 LEMKSSN--TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 92/255 (36%), Gaps = 8/255 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ + G I EA + M+ G + TYS ++ F + D L EM +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P TYN L+ + + V + M E + PD+++Y +I
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
I P + Y+ ++EA EA F M G +P T+ LL +
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G ++ + ++ +G T+NA I + EEA++ M +
Sbjct: 504 RGGLVKESEAILSRLVD--------SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 276 MGLSPDAVCYSTVIS 290
PD V+S
Sbjct: 556 SRCDPDERTLEAVLS 570
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 115/295 (38%), Gaps = 38/295 (12%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
Y++V+ + +D A M + P V T+N L+ YCR D A+ + R M
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
E+G P+V S+N +I F ++ G AT L++ LC E R+
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV------ 240
+A L ++L V P E Y L+ C + +A + +E+ KG P F+
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 241 ---------------------TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
G P VT+N L+ LC D +A + G
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 280 PDAVCYSTVISGLKIETEDK-----AIWWLDED------TYDSLMDSLSYEDTYS 323
PD Y ++SG E K LD+D TY+ LMD LS +S
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKR------------LCREGRIPEAEQM 51
NV +N +IRGF ++ GK + K E + R LCREGR+ +A +
Sbjct: 262 NVVSFNTLIRGFLSS-GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGL 320
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
+ + K + E Y S++ C NK A ++ E+ KG +P + +LV +
Sbjct: 321 VLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRK 380
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+KA G + M G+ PD ++N ++ C KG PD T
Sbjct: 381 SGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETT 440
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
Y L+ E R E L EML + PD TY RL++ G+F++
Sbjct: 441 YHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 138/315 (43%), Gaps = 17/315 (5%)
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEM--IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
E + S I +C K+D A M + G P+V YN++V Y + +DKA+
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRF 215
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
+ M + PDV ++N +I+ +C +KG P+ ++++L+
Sbjct: 216 YQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
++ E + EM+ G E T L++ C G A L ++++K L
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL----- 330
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAI 301
P+ Y +L+ LC ++ A+E++ + + G +P + +T++ GL+ +
Sbjct: 331 ---PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 302 WWLDEDTYDS--LMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
E ++ L DS+ T++ ++ D + + A +L S GY Y V
Sbjct: 388 SGFMEKMMNAGILPDSV----TFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 360 LINGLHKKARTREAK 374
L++G K+ R +E +
Sbjct: 444 LVSGFTKEGRRKEGE 458
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
P+ Y++++ + +A ++ M + PD T+ L+N C +F A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYS 286
EM KG P+ +V++N LI G ++EE +++ M E+G
Sbjct: 251 FREMKEKGCEPN--------VVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCE 302
Query: 287 TVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMS 346
++ GL E L D + + L E Y S++ E RA+++ ++
Sbjct: 303 ILVDGLCREGRVDDACGLVLDLLNKRV--LPSEFDYGSLVEKLCGENKAVRAMEMMEELW 360
Query: 347 RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 405
+ G ++A + L+ GL K RT +A + + + G L P +++LL + +S+
Sbjct: 361 KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL--PDSVTFNLLLRDLCSSD 417
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKC---KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 92
+K + GR+ + +MLE M+ + DE TY++V+ F N +D A +L+EM
Sbjct: 421 MKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR 480
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE-RGLSPDVDSYNRVISKFCXXXXXX 151
G + +TYN L+ YC++ +D+A +LR M E G+ PDV SYN +I
Sbjct: 481 MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSA 540
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG-VSPDELTYTRL 210
+GI P +Y++LM+A + + A +F EM+ V D + + L
Sbjct: 541 GALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNML 600
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
+ C +G A + M GF P+ + TY +L +G+ + +AL +
Sbjct: 601 VEGYCRLGLIEDAQRVVSRMKENGFYPN--------VATYGSLANGVSQARKPGDALLLW 652
Query: 271 RGMPE 275
+ + E
Sbjct: 653 KEIKE 657
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 50/316 (15%)
Query: 63 DERTYSSVIGWFCNL--NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVG 120
DE + V+ F L N +D + ++ K F+P Y +L+ Y + V
Sbjct: 378 DEVSEEGVVDVFKKLLPNSVDPSGE--PPLLPKVFAPDSRIYTTLMKGYMKNGRVADTAR 435
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
+L AM + D+ PD TY++++ A
Sbjct: 436 MLEAMRRQD--------------------------------DRNSHPDEVTYTTVVSAFV 463
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
+ A + EM R GV + +TY LL C + +A L EM
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA------ 517
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKA 300
G P +V+YN +I G +D AL M G++P + Y+T++ + + K
Sbjct: 518 -GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPK- 575
Query: 301 IWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 357
L +D +M+ + ++ ++ Y G ++ A ++ M +G+ + Y
Sbjct: 576 ---LANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 358 SVLINGLHKKARTREA 373
L NG+ + + +A
Sbjct: 633 GSLANGVSQARKPGDA 648
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 12/240 (5%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G EAE++ M G+ D +YSS+I + ++ L M + P Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAE-RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
N++V A + V +A +++ M E +G+ P+V +YN +I C +
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
+KG+FP TY + M L + E F+L +M + G P TY L+ C +F
Sbjct: 401 EKGLFPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
L DEM K PD + +Y +IHGL ++EEA + M + G+ P+
Sbjct: 458 NVLLLWDEMKEKTVGPD--------LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 21/266 (7%)
Query: 33 FQSL-KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCN-LNKIDSAHTLLSEM 90
FQSL LCR + +A ++ K K F D ++++ V+ +CN + A + EM
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNGWCNVIGSPREAERVWMEM 293
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXX-X 149
G VV+Y+S++ Y + S++K + + M + + PD YN V+
Sbjct: 294 GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY-- 207
+KGI P+ TY+SL++ LC ++ EA +F EML G+ P TY
Sbjct: 354 SEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA 413
Query: 208 -TRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 266
R+L GE + F L +M G P + TY LI LC +
Sbjct: 414 FMRILRT----GE--EVFELLAKMRK--------MGCEPTVETYIMLIRKLCRWRDFDNV 459
Query: 267 LEILRGMPEMGLSPDAVCYSTVISGL 292
L + M E + PD Y +I GL
Sbjct: 460 LLLWDEMKEKTVGPDLSSYIVMIHGL 485
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 138/355 (38%), Gaps = 50/355 (14%)
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF---AYCRR 112
K +G R Y S+I + K D+A TL+ EM + FSPS+V +L+ YC
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAV 210
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
V KA+ A L +D + ++S C DK F DA ++
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSF 269
Query: 173 SSLMEALC-VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
+ ++ C V EA ++ EM GV D ++Y+ +++ G K L D M
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 329
Query: 232 HKGFLPD---------------FVT-------------GFSPAIVTYNALIHGLCFLDRV 263
+ PD FV+ G P +VTYN+LI LC +
Sbjct: 330 KECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKT 389
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSL--MDSLSYE-- 319
EEA ++ M E GL P Y + L+ E+ ++ L M + E
Sbjct: 390 EEAKQVFDEMLEKGLFPTIRTYHAFMRILRT----------GEEVFELLAKMRKMGCEPT 439
Query: 320 -DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
+TY ++ + L L +M +Y V+I+GL + EA
Sbjct: 440 VETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 39 LCREGRIPEAEQMLEVMKC-KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
L + + EA +++ M+ KG+ + TY+S+I C K + A + EM+ KG P
Sbjct: 347 LAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP 406
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
++ TY++ + + V + + +R M G P V++Y +I K C
Sbjct: 407 TIRTYHAFMRILRTGEEVFELLAKMRKM---GCEPTVETYIMLIRKLCRWRDFDNVLLLW 463
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 204
+K + PD ++Y ++ L + ++ EA+ ++EM G+ P+E
Sbjct: 464 DEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
+E+ K G+ D TY+ +I FC S++++++EM KG P+ ++ ++ +
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
D D+ +L M +RG++ V +YN I C + G+ P+ T
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
YS L+ C E EA LF+ M+ G PD Y L+ C G+F A L E +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
K ++P F +L++GL +VEEA E++ + E
Sbjct: 355 EKNWVPSF--------SIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 48/313 (15%)
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
ER + I + N +D + + ++ S +V + N+L+FA +A +
Sbjct: 116 ERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYI 175
Query: 124 AMAER-GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M + G+ PD+++YNR+I FC KGI P+++++ ++ E
Sbjct: 176 EMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAE 235
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ E + M GV+ TY + + C + +A L D M+ G
Sbjct: 236 DKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS--------AG 287
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIW 302
P VTY+ LIHG C D EEA ++ + M G PD+ CY T+I
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIY------------ 335
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAE-GNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
YL + G+ + AL L + ++ S+ L+
Sbjct: 336 --------------------------YLCKGGDFETALSLCKESMEKNWVPSFSIMKSLV 369
Query: 362 NGLHKKARTREAK 374
NGL K ++ EAK
Sbjct: 370 NGLAKDSKVEEAK 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
E + E ++L +MK +G+ + TY+ I C K A LL M++ G P+ VT
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
Y+ L+ +C D ++A + + M RG PD + Y +I C +
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLF 192
+K P + SL+ L + ++ EA +L
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
TY+ ++ +C + + A + ++MI +G P +V +N ++ R A+ + M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+G P+V SY +I FC VD G+ PDAA Y+ L+ +++L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
++L +EM G PD TY L+ A ++++MI P
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ--------NEIEP 471
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDK-AIWWL 304
+I T+N ++ E + M + G+ PD Y+ +I GL E + + A +L
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 305 DE 306
+E
Sbjct: 532 EE 533
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 14/328 (4%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+LE M KGL E T++ + F + A + M F V T N L+ +
Sbjct: 217 VLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R +A + + ER +P++ +Y +++ +C +D+G+ PD
Sbjct: 276 RAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIV 334
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
++ ++E L ++ S+A LF M G P+ +YT ++ C A D+M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
+ G PD Y LI G +++ E+L+ M E G PD Y+ +I
Sbjct: 395 VDSGLQPD--------AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 291 GLKIET-EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
+ + + A ++ + + S+ T++ +M Y N + + +M + G
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIH---TFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDL 377
+Y+VLI GL + ++REA R L
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYL 531
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ L R + +A ++ VMK KG + R+Y+ +I FC + +++A +M+ G
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P Y L+ + + +D +L+ M E+G PD +YN +I
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ I P T++ +M++ + + ++ EM++ G+ PD+ +YT L+
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Query: 216 LVGEFTKAFHLHDEMIHKG----------FLPDFVTGFSPAI 247
G+ +A +EM+ KG F DF G P I
Sbjct: 520 GEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR + EA ++ M +GL D ++ ++ K A L M +KG P+V
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNV 368
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+Y ++ +C++ S++ A+ M + GL PD Y +I+ F
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KG PD TY++L++ + ++ A ++ +M++ + P T+ ++ + +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ + +EMI KG PD +Y LI GL + EA L M + G+
Sbjct: 489 YEMGRAVWEEMIKKGICPD--------DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
Query: 280 PDAVCYS 286
+ Y+
Sbjct: 541 TPLIDYN 547
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 176/417 (42%), Gaps = 36/417 (8%)
Query: 15 FATAAGKSDSESKKV------GEAF--------QSLKRLCREGRIPEAEQMLEVMKCKGL 60
F + G+ D K+ GE F Q L+ CR G + EA Q++ +M C G+
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 61 FLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVG 120
+ +S ++ F + A L ++MI G SP++VTY SL+ + VD+A
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
+L + GL+PD+ N +I + + + PD T++S++ +LC
Sbjct: 304 VLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Query: 181 VEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
LS FDL + G G D +T L N +G + A + M +K F D
Sbjct: 364 ----LSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALD- 418
Query: 240 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETED 298
TY + LC A+++ + + + DA +S +I L ++ +
Sbjct: 419 -------CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYN 471
Query: 299 KAIWWLDEDTYDSL-MDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAY 357
A+ + +D +S Y+ + + ++ A L DM G + Y
Sbjct: 472 TAVHLFKRCILEKYPLDVVS----YTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTY 527
Query: 358 SVLINGLHKKARTREAKRDLLYIASDGFLSMPS--YTVYDILLENCSN-SEFKSLVE 411
+I+GL K+ T + ++ L +G P+ + VY +L + SEF+S+ E
Sbjct: 528 RTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFE 584
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%)
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI-FPDAATYSSLMEAL 179
+L A GL P+ +N ++ C GI +P++ TYS+LM+ L
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 180 CVEQRLSEAFDLFREML-RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
R EA +LF +M+ + G+SPD +T+ ++N C GE +A + D M
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKK------ 296
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETED 298
G +P + Y+AL++G C + +++EA + + + GL D V Y+T
Sbjct: 297 --NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT----------- 343
Query: 299 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
+MN + G A++L +M + + Y+
Sbjct: 344 --------------------------LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 359 VLINGLHKKARTREAKRDLLYIASDGF-LSMPSYTVYDILLENCSNSEFKSLVELVKDYS 417
V++ GL + R+ EA + L S+G L+ SY + IL C N E + V+ + S
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI--ILNALCCNGELEKAVKFLSVMS 435
Query: 418 MRDLSDDAATAHTTMLHL 435
R + AT + ++ L
Sbjct: 436 ERGIWPHHATWNELVVRL 453
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 9/250 (3%)
Query: 44 RIPEAEQMLEVMKCK-GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
R EA ++ E M K G+ D T++ +I FC +++ A +L M G +P+V Y
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
++L+ +C+ + +A + + GL D Y +++ FC
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
D TY+ ++ L E R EA + + GV ++ +Y +LNA C GE K
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A M +G P T+N L+ LC E + +L G +GL P
Sbjct: 427 AVKFLSVMSERGIWPHH--------ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGP 478
Query: 283 VCYSTVISGL 292
+ V+ +
Sbjct: 479 KSWGAVVESI 488
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 46/231 (19%)
Query: 8 YNGMIRGFATAAG-----------KSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMK 56
+N MI GF A K + + V + C+ G+I EA+Q + +K
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF--------- 107
GL LD Y++++ FC + D A LL EM A +TYN ++
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 108 --------------------------AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
A C ++KAV L M+ERG+ P ++N ++
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 142 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF 192
+ C + G+ P ++ +++E++C E++L F+L
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 18/255 (7%)
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS-PDAVCYSTVISGLKIETEDKA 300
G P +N L+ C + A ++ M G+S P+++ YST++ L + K
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 301 IWWLDEDTYDSLMDSLSYED-TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
L ED + +S + T++ ++N + G ++RA ++ M ++G + YS
Sbjct: 251 AVELFEDMISK--EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMR 419
L+NG K + +EAK+ + G L + + ++ C N E ++L+ +
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTG-LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS 367
Query: 420 DLSDDAATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVHKA 466
D T + + L ++ E + G Y +++ C + + KA
Sbjct: 368 RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Query: 467 YNMYMEMVHYGHAPH 481
M G PH
Sbjct: 428 VKFLSVMSERGIWPH 442
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 37/366 (10%)
Query: 14 GFATAAGKSDSESKKVGEAFQSLKRLCRE--------------GRIPEAEQML---EVMK 56
G ++ DS++ K+ + + KR C R+ EA++ EV++
Sbjct: 52 GGQSSNDAKDSKNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQ 111
Query: 57 CKGLFLDERTYSSVIG---WFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD 113
+ F D ++ VI + + AH L EM +V ++N+L+ AY
Sbjct: 112 YQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSK 171
Query: 114 SVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+D+A+ + + E+ G++PD+ +YN +I C G PD ++
Sbjct: 172 KLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISF 231
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
++L+E + E ++ M +SP+ +Y + +FT A +L D M
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+G PD + TYNALI + +EE ++ M E GL+PD V Y +I L
Sbjct: 292 EGISPD--------VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 293 -KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
K D+A+ +E L LS + Y V+ + G + A QL ++G L
Sbjct: 344 CKKGDLDRAVEVSEEAIKHKL---LSRPNMYKPVVERLMGAGKIDEATQL----VKNGKL 396
Query: 352 SSYVAY 357
SY Y
Sbjct: 397 QSYFRY 402
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 8/216 (3%)
Query: 74 FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 133
C+ +A + + +M+ G +P +YNS++ + + ++ ++ + E PD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 134 VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFR 193
VD+Y V+++ C + G+ P A YSS++ +L + R+ EA + F
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 194 EMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNAL 253
+ML G+ PDE+ Y ++N G +A L +E++ K FL P+ TY L
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV-KHFL-------RPSSFTYTVL 658
Query: 254 IHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
I G + +E+ + L M E GLSP+ V Y+ +I
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 12/336 (3%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
+Y+SVI N I+ +L++ + F P V TY +V C+++ D A I+ AM
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
E GL P V Y+ +I ++ GI PD Y ++ R+
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
EA +L E+++ + P TYT L++ +G K D+M+ G SP
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED--------GLSP 685
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWL 304
+V Y ALI + + + M E + D + Y T++SGL + K +
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVI 745
Query: 305 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
E + L+ L S+ + G+ A+++ + + + Y+ ++ +I G
Sbjct: 746 VEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYL-HNTIITGY 804
Query: 365 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 400
R EA L + +G + P+ Y IL+++
Sbjct: 805 CAAGRLDEAYNHLESMQKEGIV--PNLVTYTILMKS 838
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 183/468 (39%), Gaps = 76/468 (16%)
Query: 1 MALNVNIYNGMIRGFATAAGKSDSES---------KKVGEAFQS--LKRLCREGRIPEAE 49
M L VN+Y + F +++E+ V + + +K C++ + A
Sbjct: 233 MPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAM 292
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ M + LD ++++I F L +D + S+MI KG +V TY+ ++ +Y
Sbjct: 293 RLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSY 352
Query: 110 CRRDSVDKAVGI-LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
C+ +VD A+ + + +S +V Y +I F +D GI PD
Sbjct: 353 CKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRG--GVSPD--------ELTYTRLL------- 211
TY L++ L L A + + +L G++P E+ LL
Sbjct: 413 HITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKD 472
Query: 212 ------------NACCLVGEFTKAFHLHDEMIHKGFLP-------------------DFV 240
A C + A ++M++ G P D
Sbjct: 473 ANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLA 532
Query: 241 T--------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+ F P + TY +++ LC + + A I+ M E+GL P YS++I L
Sbjct: 533 SLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSL 592
Query: 293 KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGY 350
+ + + E+T+ +++S D Y ++N Y G + A +L ++ +
Sbjct: 593 G--KQGRVVEA--EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Query: 351 LSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
S Y+VLI+G K + + L + DG P+ +Y L+
Sbjct: 649 RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL--SPNVVLYTALI 694
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 159/420 (37%), Gaps = 50/420 (11%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ G EAE + + M+ G ++D+ Y+ ++ +C N + A L M+ + F
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+N+L+ + + +DK + M ++G+ +V +Y+ +I +C
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 159 XXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ I + Y++L+ + + +A DL ML G+ PD +TY LL
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKC 426
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAI---------------------------VTY 250
E A + ++ G G +P + V
Sbjct: 427 HELKYAMVILQSILDNG------CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGL 480
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIET--EDKA--IWWLDE 306
+ LC AL + M +G +P Y++VI L E ED A + + E
Sbjct: 481 AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQE 540
Query: 307 DTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
+D + DTY V+N+ + + A + M G + YS +I L K
Sbjct: 541 ------LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGK 594
Query: 367 KARTREAKRDLLYIASDGFLSMPSYTVYDILL----ENCSNSEFKSLVELVKDYSMRDLS 422
+ R EA+ + G P Y I++ N E LVE V + +R S
Sbjct: 595 QGRVVEAEETFAKMLESGI--QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS 652
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 158/389 (40%), Gaps = 34/389 (8%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMK----CKG 59
NV+ Y +I GF G + +A L R+ G +P+ ++K C
Sbjct: 377 NVHCYTNLIFGFYKKGG--------MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHE 428
Query: 60 LFLDERTYSSVIGWFCNLNK--ID-------SAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
L S++ C +N ID +LL E+ K + + V + A C
Sbjct: 429 LKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALC 488
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
+ + A+ + M G +P SYN VI + PD
Sbjct: 489 SQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVD 548
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
TY ++ LC + AF + M G+ P Y+ ++ + G +A +M
Sbjct: 549 TYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
+ G PD + Y +I+ R++EA E++ + + L P + Y+ +IS
Sbjct: 609 LESGIQPDE--------IAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 291 G-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
G +K+ +K +LD+ D L ++ Y++++ +L +G+ + + L M +
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVL---YTALIGHFLKKGDFKFSFTLFGLMGEND 717
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLL 378
++AY L++GL +A R+ KR ++
Sbjct: 718 IKHDHIAYITLLSGLW-RAMARKKKRQVI 745
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 155/409 (37%), Gaps = 84/409 (20%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L ++GR+ EAE+ M G+ DE Y +I + +ID A+ L+ E++ PS
Sbjct: 592 LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPS 651
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
TY L+ + + ++K L M E GLSP+V Y +I F
Sbjct: 652 SFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFG 711
Query: 159 XXVDKGIFPDAATYSSLMEAL------------CVE-------QRL-------------- 185
+ I D Y +L+ L VE QRL
Sbjct: 712 LMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLG 771
Query: 186 ---SEAFDL-FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
S++F + ++ + P+ + ++ C G +A++ + M +G +P+
Sbjct: 772 NYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPN--- 828
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG---------- 291
+VTY L+ +E A+++ G PD V YST++ G
Sbjct: 829 -----LVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 292 --LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
L +E + I ++D+Y+ L+ L Y A+++ DM+
Sbjct: 881 LALMLEMQKSGINP-NKDSYEKLLQCLCYSRL-------------TMEAVKVVKDMAALD 926
Query: 350 YLSSYVAYSVLINGLHKKARTREAK----------RDLLYIASDGFLSM 388
+ ++ LI L ++ + REA+ R LL G L M
Sbjct: 927 IWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKM 975
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 169/452 (37%), Gaps = 45/452 (9%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G+ D S++ L + D A L +IA G++PS + + +V C +D +A
Sbjct: 126 GIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEA 185
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP-DAATYSSLME 177
+ ERG + R+ C P Y SL
Sbjct: 186 FHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFY 245
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
C +EA LF M G D++ YT L+ C T A L+ M+ + F
Sbjct: 246 CFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFEL 305
Query: 238 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI-SGLKIET 296
D P I +N LIHG L +++ + M + G+ + Y +I S K
Sbjct: 306 D------PCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 297 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
D A+ +T D Y++++ + +G M +A+ L M +G + ++
Sbjct: 358 VDYALRLFVNNTGSE--DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHIT 415
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDY 416
Y VL+ L K + A L I +G P ++++ N E K + L+ +
Sbjct: 416 YFVLLKMLPKCHELKYAMVILQSILDNGCGINPP------VIDDLGNIEVK-VESLLGEI 468
Query: 417 SMRD--LSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMV 474
+ +D L+ TT L C N A + +MV
Sbjct: 469 ARKDANLAAVGLAVVTTAL------------------------CSQRNYIAALSRIEKMV 504
Query: 475 HYGHAPHMFSVLALISALDDDRMYNEMSWVIN 506
+ G P FS ++I L + + +++ ++N
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVN 536
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 137/350 (39%), Gaps = 27/350 (7%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSE-MIAKGFSPSVVTYNSLVFAYCRRDSVDK 117
G+ LD Y ++I + + A T ++ +I G P +S+VF + D+
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 118 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
A L + G +P +S + V+ + C ++G L +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC-CLVGEFTKAFHLHDEMIHKGFL 236
LC L+EA + + P + + L C C G +A L D M G+
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 237 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIE 295
D V Y L+ C + + A+ + M E D ++T+I G +K+
Sbjct: 270 VD--------KVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLG 321
Query: 296 TEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL------DHDMSRDG 349
DK + + ++ TY ++ Y EGN+ AL+L D+SR+
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVF---TYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNV 378
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
+ Y+ LI G +KK +A L+ + +G + P + Y +LL+
Sbjct: 379 H-----CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV--PDHITYFVLLK 421
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 14/258 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC + R EA E +K +G L + C ++ A +L + P
Sbjct: 176 LCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPL 235
Query: 99 VVT-YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
V Y SL + +C+R +A + M G D Y ++ ++C
Sbjct: 236 PVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
V++ D +++L+ L + +F +M++ GV + TY ++ + C
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTG---FSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G A L F+ + TG S + Y LI G +++A+++L M
Sbjct: 356 GNVDYALRL--------FVNN--TGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRML 405
Query: 275 EMGLSPDAVCYSTVISGL 292
+ G+ PD + Y ++ L
Sbjct: 406 DNGIVPDHITYFVLLKML 423
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
TY+ ++ +C + + A + ++MI G P +V +N ++ R A+ + M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+G P+V SY +I FC VD G+ PDAA Y+ L+ +++L
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
++L +EM G PD TY L+ ++++MI P
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ--------NEIEP 471
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDK-AIWWL 304
+I T+N ++ E + M + G+ PD Y+ +I GL E + + A +L
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 305 DE 306
+E
Sbjct: 532 EE 533
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 18/330 (5%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+LE M KGL E T++ + F + A + M F V T N L+ +
Sbjct: 217 VLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R +A + + ER +P++ +Y +++ +C +D G+ PD
Sbjct: 276 RAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 334
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
++ ++E L + S+A LF M G P+ +YT ++ C A D+M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI- 289
+ G PD Y LI G +++ E+L+ M E G PD Y+ +I
Sbjct: 395 VDSGLQPD--------AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 290 --SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 347
+ K+ I+ ++ + + S+ T++ +M Y N + + +M +
Sbjct: 447 LMANQKMPEHGTRIY--NKMIQNEIEPSIH---TFNMIMKSYFVARNYEMGRAVWDEMIK 501
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDL 377
G +Y+VLI GL + ++REA R L
Sbjct: 502 KGICPDDNSYTVLIRGLISEGKSREACRYL 531
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ L R + +A ++ VMK KG + R+Y+ +I FC + +++A +M+ G
Sbjct: 340 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P Y L+ + + +D +L+ M E+G PD +YN +I
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 459
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ I P T++ +M++ V + ++ EM++ G+ PD+ +YT L+
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Query: 216 LVGEFTKAFHLHDEMIHKG----------FLPDFVTGFSPAI 247
G+ +A +EM+ KG F DF G P I
Sbjct: 520 SEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR + EA ++ M GL D ++ ++ K A L M +KG P+V
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+Y ++ +C++ S++ A+ M + GL PD Y +I+ F
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KG PD TY++L++ + ++ ++ +M++ + P T+ ++ + +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ + DEMI KG PD +Y LI GL + EA L M + G+
Sbjct: 489 YEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Query: 280 PDAVCYS 286
+ Y+
Sbjct: 541 TPLIDYN 547
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
TY+ ++ +C + + A + ++MI G P +V +N ++ R A+ + M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+G P+V SY +I FC VD G+ PDAA Y+ L+ +++L
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
++L +EM G PD TY L+ ++++MI P
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ--------NEIEP 470
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDK-AIWWL 304
+I T+N ++ E + M + G+ PD Y+ +I GL E + + A +L
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 305 DE 306
+E
Sbjct: 531 EE 532
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 18/330 (5%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+LE M KGL E T++ + F + A + M F V T N L+ +
Sbjct: 216 VLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 274
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R +A + + ER +P++ +Y +++ +C +D G+ PD
Sbjct: 275 RAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 333
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
++ ++E L + S+A LF M G P+ +YT ++ C A D+M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI- 289
+ G PD Y LI G +++ E+L+ M E G PD Y+ +I
Sbjct: 394 VDSGLQPD--------AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 290 --SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSR 347
+ K+ I+ ++ + + S+ T++ +M Y N + + +M +
Sbjct: 446 LMANQKMPEHGTRIY--NKMIQNEIEPSIH---TFNMIMKSYFVARNYEMGRAVWDEMIK 500
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDL 377
G +Y+VLI GL + ++REA R L
Sbjct: 501 KGICPDDNSYTVLIRGLISEGKSREACRYL 530
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ L R + +A ++ VMK KG + R+Y+ +I FC + +++A +M+ G
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 398
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P Y L+ + + +D +L+ M E+G PD +YN +I
Sbjct: 399 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 458
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ I P T++ +M++ V + ++ EM++ G+ PD+ +YT L+
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Query: 216 LVGEFTKAFHLHDEMIHKG----------FLPDFVTGFSPAI 247
G+ +A +EM+ KG F DF G P I
Sbjct: 519 SEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 560
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR + EA ++ M GL D ++ ++ K A L M +KG P+V
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+Y ++ +C++ S++ A+ M + GL PD Y +I+ F
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+KG PD TY++L++ + ++ ++ +M++ + P T+ ++ + +
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ + DEMI KG PD +Y LI GL + EA L M + G+
Sbjct: 488 YEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Query: 280 PDAVCYS 286
+ Y+
Sbjct: 540 TPLIDYN 546
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 9/255 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
CR G I EAE++ + MK G+ + TYS VI C +I AH + ++M+ G +P+
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA 325
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+T+N+L+ + + +K + + M + G PD +YN +I C
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNT 385
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ K +A+T++++ + ++ ++ A ++ +M+ P+ +TY L+
Sbjct: 386 MIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGL 278
+ EM K P+ + TY L+ C + A ++ + M E L
Sbjct: 446 TDMVLKMKKEMDDKEVEPN--------VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCL 497
Query: 279 SPDAVCYSTVISGLK 293
+P Y V++ L+
Sbjct: 498 TPSLSLYEMVLAQLR 512
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
Y+ +I + + D A L+ M ++ S+ T+ L+ Y R +AV M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
+ G PD +++ VIS D+ PD Y++L+ C +S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
EA +F+EM G+ P+ TY+ +++A C G+ ++A + +M+ +G +P
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD--------SGCAPN 324
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+T+N L+ R E+ L++ M ++G PD + Y+ +I
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEA 369
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 143/355 (40%), Gaps = 12/355 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++R R G EA M+ G D+ +S VI + A + + + F
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-F 251
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V+ Y +LV +CR + +A + + M G+ P+V +Y+ VI C
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+D G P+A T+++LM R + ++ +M + G PD +TY L+ A C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
A + + MI K + T+N + + V A + M E
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVN--------ASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 276 MGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
P+ V Y+ ++ + + ++ D ++ +TY ++ + G+
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE--PNVNTYRLLVTMFCGMGHW 481
Query: 336 QRALQLDHDMSRDGYLSSYVA-YSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
A +L +M + L+ ++ Y +++ L + + ++ + + + G ++ P
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARP 536
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 153/377 (40%), Gaps = 42/377 (11%)
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
YN ++ + D A ++ M R + ++++ +I ++
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
D G PD +S ++ L ++R SEA F + L+ PD + YT L+ C GE +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+A + EM + G P + TY+ +I LC ++ A ++ M + G +P+
Sbjct: 273 EAEKVFKEMK--------LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 282 AVCYSTVIS-GLKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQR 337
A+ ++ ++ +K +K + ++ M L E TY+ ++ + + N++
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQ------MKKLGCEPDTITYNFLIEAHCRDENLEN 378
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
A+++ + M + + ++ + + KK A R +Y P+ Y+IL
Sbjct: 379 AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR--MYSKMMEAKCEPNTVTYNIL 436
Query: 398 LENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEH 457
+ S+ +V +K K D E + + Y LL+
Sbjct: 437 MRMFVGSKSTDMVLKMK---------------------KEMDDKEVEPNVNTYRLLVTMF 475
Query: 458 CRSHNVHKAYNMYMEMV 474
C + + AY ++ EMV
Sbjct: 476 CGMGHWNNAYKLFKEMV 492
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 151/327 (46%), Gaps = 18/327 (5%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D T++S++ + +I++ + M+A+G P++V+YN+L+ AY A+ +L
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ + G+ PDV SY +++ + + P+ TY++L++A
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
L+EA ++FR+M + G+ P+ ++ LL AC + + + G
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR--------G 358
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAI 301
+ YN+ I +E+A+ + + M + + D+V ++ +ISG ++ +AI
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 302 WWLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
+L E M+ LS ++ YSSV+ Y +G + A + + M G +AY+
Sbjct: 419 SYLKE------MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 359 VLINGLHKKARTREAKRDLLYIASDGF 385
+++ + + +A L + ++G
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGI 499
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 193/488 (39%), Gaps = 66/488 (13%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G+ A +++ M + TY+++I + A + +M G P +V
Sbjct: 58 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 117
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
T+N ++ AY KA+ M + PD ++N +I
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 161 VDKG--IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+K PD T++S+M V+ + +F M+ G+ P+ ++Y L+ A + G
Sbjct: 178 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT--------GFS-------------------PAIVTYN 251
A + ++ G +PD V+ G S P +VTYN
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDS 311
ALI + EA+EI R M + G+ P+ V T+++ + ++ DT S
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK-----VNVDTVLS 352
Query: 312 LMDSLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
S Y+S + Y+ +++A+ L M + + V +++LI+G + +
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 369 RTREAKRDLLYIASDGFLSMP-SYTVYDILLENCSNSEFKSLVELVKDYSMRDLS--DDA 425
+ EA + Y+ LS+P + VY +L C+ S+ + E ++ ++ +
Sbjct: 413 KYPEA---ISYLKEMEDLSIPLTKEVYSSVL--CAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 426 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 485
A+T+MLH N S KA +++EM G P +
Sbjct: 468 VIAYTSMLHAYNA---------------------SEKWGKACELFLEMEANGIEPDSIAC 506
Query: 486 LALISALD 493
AL+ A +
Sbjct: 507 SALMRAFN 514
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 143/322 (44%), Gaps = 27/322 (8%)
Query: 54 VMKCKGLFL---------DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
V + +GLF D TY ++I + A L+ +M+ +PS TYN+
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
L+ A + +A+ + + M + G+ PD+ ++N V+S +
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREML--RGGVSPDELTYTRLLNACCLVGEFTK 222
+ PD T++ ++ L + S+A DLF M R PD +T+T +++ + GE
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
+ + M+ +G P+ IV+YNAL+ AL +L + + G+ PD
Sbjct: 207 CRAVFEAMVAEGLKPN--------IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 258
Query: 283 VCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRAL 339
V Y+ +++ + KA ++ + + + TY+++++ Y + G + A+
Sbjct: 259 VSYTCLLNSYGRSRQPGKA-----KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 340 QLDHDMSRDGYLSSYVAYSVLI 361
++ M +DG + V+ L+
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLL 335
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 153/340 (45%), Gaps = 24/340 (7%)
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX 150
I K + YN ++ + R + VD+A G+ M + PD ++Y+ +I+
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 151 XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
+ I P +TY++L+ A EA ++ ++M GV PD +T+ +
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
L+A +++KA + M PD T+N +I+ L L + +AL++
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPD--------TTTFNIIIYCLSKLGQSSQALDLF 174
Query: 271 RGMPEMGLS--PDAVCYSTVIS--GLKIETED-KAIWWLDEDTYDSLMDSLSYEDTYSSV 325
M E PD V +++++ +K E E+ +A++ + + L ++ +Y+++
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF--EAMVAEGLKPNIV---SYNAL 229
Query: 326 MNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
M Y G AL + D+ ++G + V+Y+ L+N + + +AK L + +
Sbjct: 230 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE-- 287
Query: 386 LSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 425
P+ Y+ L++ ++ F L E V+ + R + D
Sbjct: 288 RRKPNVVTYNALIDAYGSNGF--LAEAVEIF--RQMEQDG 323
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 164/422 (38%), Gaps = 26/422 (6%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
Y+ +I N +D A L EM P TY++L+ A+ R A+ ++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
++P +YN +I+ D G+ PD T++ ++ A ++ S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
+A F M V PD T+ ++ +G+ ++A L + M K P
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR------AECRPD 187
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIE-TEDKAIWWLD 305
+VT+ +++H +E + M GL P+ V Y+ ++ + A+ L
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 306 EDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
+ + ++ + +Y+ ++N Y +A ++ M ++ + V Y+ LI+
Sbjct: 248 DIKQNGIIPDVV---SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 366 KKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSM-RDLSDD 424
EA + DG P+ LL CS S+ K V+ V + R ++ +
Sbjct: 305 SNGFLAEAVEIFRQMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 362
Query: 425 AATAHTTMLHLKNKTDGEN-------------KTDGGMYNLLIFEHCRSHNVHKAYNMYM 471
A ++ + N + E K D + +LI CR +A +
Sbjct: 363 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 422
Query: 472 EM 473
EM
Sbjct: 423 EM 424
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 131/327 (40%), Gaps = 14/327 (4%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
+G I + E M +GL + +Y++++G + +A ++L ++ G P VV+
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
Y L+ +Y R KA + M + P+V +YN +I +
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
GI P+ + +L+ A ++ + G++ + Y + + E
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
KA L+ M K D VT+ LI G C + + EA+ L+ M ++ +
Sbjct: 381 KAIALYQSMRKKKVKADS--------VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 432
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRAL 339
YS+V+ + + E ++ + + D Y+S+++ Y A +A
Sbjct: 433 KEVYSSVLCAYSKQGQVTEA----ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 488
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHK 366
+L +M +G +A S L+ +K
Sbjct: 489 ELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 30/332 (9%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R + + +L + +G+ L+ Y+S IG + N +++ A L M K V
Sbjct: 340 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
T+ L+ CR +A+ L+ M + + + Y+ V+ +
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
G PD Y+S++ A ++ +A +LF EM G+ PD + + L+ A G+
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+ F L D M K +P F+ A+ + + L + A+++++ M
Sbjct: 520 SNVFVLMDLMREKE-IP-----FTGAV--FFEIFSACNTLQEWKRAIDLIQMM------- 564
Query: 281 DAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE----------DTYSSVMNDYL 330
+ L I ++ + + M L Y+ TY+ ++ L
Sbjct: 565 -----DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 619
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
A GN ++ +++ MS G S Y +I+
Sbjct: 620 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 116/309 (37%), Gaps = 39/309 (12%)
Query: 3 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----------------CREGRIP 46
LN YN I + AA E +K +QS+++ CR + P
Sbjct: 361 LNTAAYNSAIGSYINAA-----ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 415
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
EA L+ M+ + L + YSSV+ + ++ A ++ ++M G P V+ Y S++
Sbjct: 416 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
AY + KA + M G+ PD + + ++ F +K I
Sbjct: 476 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP 535
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
A + + A Q A DL + M P Y L+ +G + HL
Sbjct: 536 FTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DP----YLPSLS----IGLTNQMLHL 582
Query: 227 HD-----EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
E + K F +G + TY L+ L + + +E+L M G+ P
Sbjct: 583 FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPS 642
Query: 282 AVCYSTVIS 290
Y +IS
Sbjct: 643 NQMYRDIIS 651
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 187/486 (38%), Gaps = 57/486 (11%)
Query: 44 RIPEAEQMLEVMKCKGLFLDER-TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
++ A Q + GL +R T+ +I ++K++ A +L +M KG +
Sbjct: 129 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
L+ +Y + V ++V I + M + G+ + SYN + V
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+G+ P TY+ ++ + RL A F +M G+SPD+ T+ ++N C + +
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A L EM KG P++V+Y +I G +DRV++ L I M G+ P+A
Sbjct: 309 AEKLFVEM--KG------NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNA 360
Query: 283 VCYSTVISGL-----KIETED-------KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYL 330
YST++ GL +E ++ K I D + L+ S S
Sbjct: 361 TTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS------------- 407
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLI-NGLHKKARTREAK-------RDLLYIAS 382
G+M A ++ M+ + Y VLI N A R K ++++
Sbjct: 408 KAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 467
Query: 383 DGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDG 441
D PS Y+ ++E C+N + L + R + D A + H K
Sbjct: 468 DTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPD 525
Query: 442 EN------------KTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 489
+ + Y LLI + A MV GH P ++I
Sbjct: 526 SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Query: 490 SALDDD 495
+L +D
Sbjct: 586 ESLFED 591
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 8/245 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K L ++ A +L M KG+ DE + +I + + + + +M G
Sbjct: 157 IKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGV 216
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
++ +YNSL RR A M G+ P +YN ++ F
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+GI PD AT+++++ C +++ EA LF EM + P ++YT ++
Sbjct: 277 FFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL 336
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
V + +EM +G P TY+ L+ GLC ++ EA IL+ M
Sbjct: 337 AVDRVDDGLRIFEEMRS--------SGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 276 MGLSP 280
++P
Sbjct: 389 KHIAP 393
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 192/449 (42%), Gaps = 58/449 (12%)
Query: 8 YNGMIRGFATAAGKSDSES-------KKVGEAFQSLKRLCRE----GRIPEAEQMLEVMK 56
+N MI GF ++E K+G + S + + R+ + ++ E M+
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT-YNSLVFAYCRRDSV 115
G+ + TYS+++ C+ K+ A +L M+AK +P + + L+ + + +
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDM 412
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF--------P 167
A +L+AMA + + Y +I C ++K I
Sbjct: 413 AAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEM 472
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
+ + Y+ ++E LC + ++A LFR++++ GV D+ L+ G ++ +
Sbjct: 473 EPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEIL 531
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
M +G V S A Y LI +A L M E G PD+ + +
Sbjct: 532 KIMSRRG-----VPRESNA---YELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRS 583
Query: 288 VISGL----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDH 343
VI L +++T + + + D + D++ D + ++ L G+++ AL
Sbjct: 584 VIESLFEDGRVQTASRVMMIMI-DKNVGIEDNM---DLIAKILEALLMRGHVEEALGRID 639
Query: 344 DMSRDGYLSSYVAYSVLINGLHKKARTREA--------KRDL-LYIAS-----DGFL--- 386
++++G+ + + L++ L +K +T A +RDL L +S D L
Sbjct: 640 LLNQNGHTADLDS---LLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAG 696
Query: 387 -SMPSYTVYDILLENCSNSEFKSLVELVK 414
++ +Y+V ++E S++++KS EL+K
Sbjct: 697 KTLNAYSVLCKIMEKGSSTDWKSSDELIK 725
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
M +VM+ + +D Y+ +I C K D A + + ++ G P V TYN ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
R S+ +A + M RGL PD +YN +I C + + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
T+++L+ C R+ + +LF EM R G+ + +TYT L++ VG+F A + EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
+ G +S +I T+ ++ LC + +A+ +L
Sbjct: 168 VSNGV-------YSSSI-TFRDILPQLCSRKELRKAVAML 199
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC+ G+ EA + + GL D +TY+ +I + + + A L +EMI +G P
Sbjct: 24 LCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSLGRAEKLYAEMIRRGLVPD 79
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+TYNS++ C+++ + +A R +S ++N +I+ +C
Sbjct: 80 TITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFC 130
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+GI + TY++L+ + A D+F+EM+ GV +T+ +L C
Sbjct: 131 EMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRK 190
Query: 219 EFTKA 223
E KA
Sbjct: 191 ELRKA 195
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
YN ++ C+ D+A I + GL PDV +YN +I +F +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RF---SSLGRAEKLYAEMI 72
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
+G+ PD TY+S++ LC + +L++A VS T+ L+N C
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKATRVK 123
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+L EM +G + + ++TY LIHG + AL+I + M G+
Sbjct: 124 DGMNLFCEMYRRGIVAN--------VITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 282 AVCYSTVISGLKIETE-DKAIWWL 304
++ + ++ L E KA+ L
Sbjct: 176 SITFRDILPQLCSRKELRKAVAML 199
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D A Y+ ++ LC + EA ++F +L G+ PD TY ++ L +A L+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSL----GRAEKLY 68
Query: 228 DEMIHKGFLPDFVT------------------GFSPAIVTYNALIHGLCFLDRVEEALEI 269
EMI +G +PD +T S + T+N LI+G C RV++ + +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 270 LRGMPEMGLSPDAVCYSTVISGLK 293
M G+ + + Y+T+I G +
Sbjct: 129 FCEMYRRGIVANVITYTTLIHGFR 152
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWL----- 304
YN +IHGLC + +EA I + GL PD Y+ +I + +K +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGL 76
Query: 305 --DEDTYDSLMDSLSYED-------------TYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
D TY+S++ L ++ T+++++N Y ++ + L +M R G
Sbjct: 77 VPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRG 136
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSL 409
+++ + Y+ LI+G + A + S+G S S T DIL + CS E +
Sbjct: 137 IVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS-SSITFRDILPQLCSRKELRKA 195
Query: 410 VELV 413
V ++
Sbjct: 196 VAML 199
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 26/193 (13%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAF------------QSLKRLCREGRIPEAEQMLEVM 55
YN +I G AGK D + G F Q+ + R + AE++ M
Sbjct: 17 YNIIIHGLC-KAGKFD----EAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEM 71
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
+GL D TY+S+I C NK+ A + S S T+N+L+ YC+ V
Sbjct: 72 IRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRV 122
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
+ + M RG+ +V +Y +I F V G++ + T+ +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 176 MEALCVEQRLSEA 188
+ LC + L +A
Sbjct: 183 LPQLCSRKELRKA 195
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 38 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
R+ E RI E+ +L+ + K + +D YS V+ + SA + EM+ +GFS
Sbjct: 278 RVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSA 337
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ Y V C + V +A +L M E G+SP +++N +I F
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYC 397
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
V +G+ P + ++ +++++ + ++ A ++ + + G PDE TY+ L+
Sbjct: 398 EVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEG 457
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
+ +A L EM ++ SP + +LI GLC +VE + L+ M +
Sbjct: 458 NDIDQALKLFYEMEYR--------KMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 278 LSPDAVCYSTVISGLK 293
+ P+A Y +I +
Sbjct: 510 IEPNADIYDALIKAFQ 525
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 135/343 (39%), Gaps = 49/343 (14%)
Query: 58 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 117
K ++ +E T +I C ++ LL + K PSV+ SLVF +++
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 118 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
++ +L+ + + K + D YS ++
Sbjct: 288 SMSLLKRL-----------------------------------LMKNMVVDTIGYSIVVY 312
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
A E L A +F EML+ G S + YT + CC G+ +A L EM
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE----- 367
Query: 238 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIET 296
+G SP T+N LI G E+ LE M GL P ++ ++ + KIE
Sbjct: 368 ---SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 297 EDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA 356
++A L + + E TYS ++ ++ ++ +AL+L ++M +
Sbjct: 425 VNRANEILTKSIDKGFVPD---EHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEV 481
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLE 399
+ LI GL + EA L I + P+ +YD L++
Sbjct: 482 FRSLIVGLCTCGKV-EAGEKYLKIMKKRLIE-PNADIYDALIK 522
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 35/226 (15%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+EG + A ++ + M +G + Y+ + C + A LLSEM G SP
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
T+N L+ + R +K + M RGL P ++N ++
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 161 VDKGIFPDAATYSSLMEALC----VEQ-----------RLSEAFDLFREMLRGG------ 199
+DKG PD TYS L+ ++Q ++S F++FR ++ G
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKV 495
Query: 200 --------------VSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
+ P+ Y L+ A +G+ T A +++EMI
Sbjct: 496 EAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 111/285 (38%), Gaps = 43/285 (15%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ +C+EGR E+ ++L MK G+ + T + + G A LL +M GF
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGF 540
Query: 96 SPSVVTYNSLVFAYC-----------------------------------RRDSVDKAVG 120
P + LV C + + VD+ +
Sbjct: 541 EPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLE 600
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
+ R + G PDV +Y+ +I C V KG+ P ATY+S+++ C
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
E + M +PD +TYT L++ C G ++A +EM K P+
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR- 719
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
+T+ ALI GLC EAL R M E + PD+ Y
Sbjct: 720 -------ITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 16/222 (7%)
Query: 16 ATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFC 75
+TAA +++ V + + +C G P D Y +I C
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICANGHCP----------------DVIAYHVLIKALC 625
Query: 76 NLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 135
+ A L +EM++KG P+V TYNS++ +C+ +D+ + + M E +PDV
Sbjct: 626 KACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVI 685
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
+Y +I C K +P+ T+ +L++ LC EA FREM
Sbjct: 686 TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
+ PD Y L+++ F + EM+HKG P
Sbjct: 746 EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 179/451 (39%), Gaps = 71/451 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ G++ +A +++E+++ + + L+ +TY +I F ++ID A L +M G +
Sbjct: 258 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ Y+ L+ C+ ++ A+ + + G+ PD +++ F
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG----GVS------------- 201
+DK Y SL E + EA+ + ++ GVS
Sbjct: 378 GDIDKKSV--MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAI 435
Query: 202 -PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 260
PD + + ++N + A L +++ G + P + YN +I G+C
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI--------PGPMMYNNIIEGMCKE 487
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIW-------------WLDED 307
R EE+L++L M + G+ P + + L + W+
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 308 TY--------DSLMDSLSYED------------TYSSVMNDYLAEGNMQRALQLDHDMSR 347
T+ +D+ Y D ++ ++ + + R L+L D+
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 348 DGYLSSYVAYSVLINGLHKKARTREAKRDLLY--IASDGFLSMPSYTVYDILLEN-CSNS 404
+G+ +AY VLI L K RT EA D+L+ + S G P+ Y+ +++ C
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEA--DILFNEMVSKGL--KPTVATYNSMIDGWCKEG 663
Query: 405 EF-KSLVELVKDYSMRDLSDDAATAHTTMLH 434
E + L +V+ Y D + +T+++H
Sbjct: 664 EIDRGLSCIVRMYE--DEKNPDVITYTSLIH 692
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 43/270 (15%)
Query: 58 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK 117
K + D + S VI NK+D A TLL +++ G P + YN+++ C+ ++
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 118 AVGILRAMAERGLSPDVDSYNRV-----------------------------------IS 142
++ +L M + G+ P + N + +
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 143 KFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP 202
K C +G ++ ++ L + + +LFR++ G P
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Query: 203 DELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR 262
D + Y L+ A C +A L +EM+ K G P + TYN++I G C
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSK--------GLKPTVATYNSMIDGWCKEGE 664
Query: 263 VEEALEILRGMPEMGLSPDAVCYSTVISGL 292
++ L + M E +PD + Y+++I GL
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGL 694
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 184/478 (38%), Gaps = 80/478 (16%)
Query: 76 NLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVD 135
N + ++ L EM GF T ++ YC ++A+ + + RG +
Sbjct: 191 NSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHI 250
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
S V+S FC ++ I + TY L+ E R+ +AF LF +M
Sbjct: 251 STILVVS-FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKM 309
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD------FVTGFS----- 244
R G++ D Y L+ C + A L+ E+ G PD + FS
Sbjct: 310 RRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESEL 369
Query: 245 --------------PAIVTYNALIHGLCFLDRVEEALEILRGMPEMG-LSPDAVCYSTVI 289
++ Y +L G D V EA ++ + MG D V S ++
Sbjct: 370 SRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNL--MGNYESDGV--SEIV 425
Query: 290 SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
LK +KAI L DS D+ S V+N + + A+ L HD+ ++G
Sbjct: 426 KLLK--DHNKAI----------LPDS----DSLSIVINCLVKANKVDMAVTLLHDIVQNG 469
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT---VYDILLENCSNSEF 406
+ + Y+ +I G+ K+ R+ E+ + LL D + +T +Y L E C +F
Sbjct: 470 LIPGPMMYNNIIEGMCKEGRSEESLK-LLGEMKDAGVEPSQFTLNCIYGCLAERC---DF 525
Query: 407 KSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMY---------------- 450
++L+K MR + HTT L +K + D Y
Sbjct: 526 VGALDLLK--KMRFYGFEPWIKHTTFL-VKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 451 NLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL-------DDDRMYNEM 501
I ++ V + ++ ++ GH P + + LI AL + D ++NEM
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEM 640
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 156/382 (40%), Gaps = 56/382 (14%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ +LC R+ +A +++ M+ +G D T++++IG +C + +++ AH + EM G
Sbjct: 169 MNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGI 228
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILR------------AMAERGLSPDVDS------- 136
P+ +T + L+ + + V+ +++ +M + VDS
Sbjct: 229 RPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYF 288
Query: 137 ---------------------YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
Y +I C KG+ P +Y+++
Sbjct: 289 NDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAI 348
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
+ LC + A+ L E P E TY L+ + C + KA ++ + M+ K
Sbjct: 349 IHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK-- 406
Query: 236 LPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KI 294
G + YN + GLC +D E L +L M + PD +TVI+GL K+
Sbjct: 407 -----EGADRTRI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKM 460
Query: 295 ETEDKAIWWLDEDTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQ-LDHDMSRDGYL 351
D A+ LD D + D T ++VM LA+G + AL L+ M +
Sbjct: 461 GRVDDAMKVLD----DMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Query: 352 SSYVAYSVLINGLHKKARTREA 373
VAY+ +I GL K + EA
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEA 538
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 182/465 (39%), Gaps = 72/465 (15%)
Query: 34 QSLKRLCREGRIP-EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 92
+ + +C R P EA ++L+ + +G D SSVI C+ + D AH +A
Sbjct: 59 RRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLA 118
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
GF P T N V I R + R + +R+I
Sbjct: 119 SGFIPDERTCN---------------VIIARLLYSRSPVSTLGVIHRLIG---------- 153
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
K P Y+ LM LC R+ +A L +M G PD +T+T L+
Sbjct: 154 --------FKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIG 205
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
C + E A + DEM V G P +T + LI G + VE ++++
Sbjct: 206 GYCEIRELEVAHKVFDEM--------RVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKE 257
Query: 273 M-----PEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 327
+ E S A ++ ++ + E I+ + E+ SL +S++ E Y +++
Sbjct: 258 LWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM--SLCESVNVEFAYGHMID 315
Query: 328 DYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
A ++ + M G +Y+ +I+GL K A + LL S+ F
Sbjct: 316 SLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ-LLEEGSE-FEF 373
Query: 388 MPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDG 447
PS Y +L+E+ L K+ D A +L L + +G ++T
Sbjct: 374 FPSEYTYKLLMES-----------LCKEL-------DTGKAR-NVLELMLRKEGADRTR- 413
Query: 448 GMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+YN+ + C N + N+ + M+ P +++ +I+ L
Sbjct: 414 -IYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 151/327 (46%), Gaps = 18/327 (5%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D T++S++ + +I++ + M+A+G P++V+YN+L+ AY A+ +L
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ + G+ PDV SY +++ + + P+ TY++L++A
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
L+EA ++FR+M + G+ P+ ++ LL AC + + + G
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR--------G 490
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAI 301
+ YN+ I +E+A+ + + M + + D+V ++ +ISG ++ +AI
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 302 WWLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
+L E M+ LS ++ YSSV+ Y +G + A + + M G +AY+
Sbjct: 551 SYLKE------MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 359 VLINGLHKKARTREAKRDLLYIASDGF 385
+++ + + +A L + ++G
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGI 631
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 193/488 (39%), Gaps = 66/488 (13%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G+ A +++ M + TY+++I + A + +M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
T+N ++ AY KA+ M + PD ++N +I
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 161 VDKG--IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+K PD T++S+M V+ + +F M+ G+ P+ ++Y L+ A + G
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 219 EFTKAFHLHDEMIHKGFLPDFVT--------GFS-------------------PAIVTYN 251
A + ++ G +PD V+ G S P +VTYN
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDS 311
ALI + EA+EI R M + G+ P+ V T+++ + ++ DT S
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK-----VNVDTVLS 484
Query: 312 LMDSLSYE---DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKA 368
S Y+S + Y+ +++A+ L M + + V +++LI+G + +
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 369 RTREAKRDLLYIASDGFLSMP-SYTVYDILLENCSNSEFKSLVELVKDYSMRDLS--DDA 425
+ EA + Y+ LS+P + VY +L C+ S+ + E ++ ++ +
Sbjct: 545 KYPEA---ISYLKEMEDLSIPLTKEVYSSVL--CAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 426 ATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSV 485
A+T+MLH N S KA +++EM G P +
Sbjct: 600 VIAYTSMLHAYNA---------------------SEKWGKACELFLEMEANGIEPDSIAC 638
Query: 486 LALISALD 493
AL+ A +
Sbjct: 639 SALMRAFN 646
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
PDA TY +L+ A + A +L +MLR ++P TY L+NAC G + +A +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 227 HDEMIHKGFLPDFVT---------------------------GFSPAIVTYNALIHGLCF 259
+M G PD VT P T+N +I+ L
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 260 LDRVEEALEILRGMPEMGLS--PDAVCYSTVIS--GLKIETED-KAIWWLDEDTYDSLMD 314
L + +AL++ M E PD V +++++ +K E E+ +A+ + + L
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAV--FEAMVAEGLKP 353
Query: 315 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
++ +Y+++M Y G AL + D+ ++G + V+Y+ L+N + + +AK
Sbjct: 354 NIV---SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 375 RDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDA 425
L + + P+ Y+ L++ ++ F L E V+ + R + D
Sbjct: 411 EVFLMMRKE--RRKPNVVTYNALIDAYGSNGF--LAEAVEIF--RQMEQDG 455
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 131/327 (40%), Gaps = 14/327 (4%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
+G I + E M +GL + +Y++++G + +A ++L ++ G P VV+
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
Y L+ +Y R KA + M + P+V +YN +I +
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
GI P+ + +L+ A ++ + G++ + Y + + E
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
KA L+ M K D VT+ LI G C + + EA+ L+ M ++ +
Sbjct: 513 KAIALYQSMRKKKVKADS--------VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 564
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRAL 339
YS+V+ + + E ++ + + D Y+S+++ Y A +A
Sbjct: 565 KEVYSSVLCAYSKQGQVTEA----ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 620
Query: 340 QLDHDMSRDGYLSSYVAYSVLINGLHK 366
+L +M +G +A S L+ +K
Sbjct: 621 ELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 30/332 (9%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R + + +L + +G+ L+ Y+S IG + N +++ A L M K V
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
T+ L+ CR +A+ L+ M + + + Y+ V+ +
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
G PD Y+S++ A ++ +A +LF EM G+ PD + + L+ A G+
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+ F L D M K +P F+ A+ + + L + A+++++ M
Sbjct: 652 SNVFVLMDLMREKE-IP-----FTGAV--FFEIFSACNTLQEWKRAIDLIQMM------- 696
Query: 281 DAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYE----------DTYSSVMNDYL 330
+ L I ++ + + M L Y+ TY+ ++ L
Sbjct: 697 -----DPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 751
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
A GN ++ +++ MS G S Y +I+
Sbjct: 752 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 116/309 (37%), Gaps = 39/309 (12%)
Query: 3 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----------------CREGRIP 46
LN YN I + AA E +K +QS+++ CR + P
Sbjct: 493 LNTAAYNSAIGSYINAA-----ELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 547
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
EA L+ M+ + L + YSSV+ + ++ A ++ ++M G P V+ Y S++
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
AY + KA + M G+ PD + + ++ F +K I
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP 667
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
A + + A Q A DL + M P Y L+ +G + HL
Sbjct: 668 FTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DP----YLPSLS----IGLTNQMLHL 714
Query: 227 HD-----EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
E + K F +G + TY L+ L + + +E+L M G+ P
Sbjct: 715 FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPS 774
Query: 282 AVCYSTVIS 290
Y +IS
Sbjct: 775 NQMYRDIIS 783
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 9/228 (3%)
Query: 44 RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
R+ EA+++ EV+ +D ++IG ++ DSA L M++ G P++ T +
Sbjct: 308 RLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDP-DSAVEFLVYMVSTGKLPAIRTLS 366
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
L CR D D + ++ +G ++ SY+ +IS C +
Sbjct: 367 KLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKE 426
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G+ PD + Y++L+EA C + + A L+ EM G + TY L+ GE ++
Sbjct: 427 GLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEES 486
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
L D+M+ +G PD Y +LI GLC ++E A+E+ R
Sbjct: 487 LRLFDKMLERGIEPDE--------TIYMSLIEGLCKETKIEAAMEVFR 526
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 37 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 96
K LCR + + E++ KG F + ++YS +I + C ++ ++T L EM +G +
Sbjct: 370 KNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLA 429
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P V YN+L+ A C+ + + A + M G ++ +YN +I K
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR------L 210
+++GI PD Y SL+E LC E ++ A ++FR+ + D T TR +
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER----DHKTVTRRVLSEFV 545
Query: 211 LNACC--LVGEFTKAFHLHDEMIHKG 234
LN C GE ++ + + H G
Sbjct: 546 LNLCSNGHSGEASQLLREREHLEHTG 571
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 151/396 (38%), Gaps = 31/396 (7%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A+++ M+ KG+ L+ + IGWFC ++ + L+ E+ + + L+
Sbjct: 171 AQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLIL 230
Query: 108 -AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
+ C+ A IL + PD +Y + F G+
Sbjct: 231 HSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVA 290
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRG-----------------GVSPDE----- 204
P ++ Y + + L +RL+EA ++ ++ G V PD
Sbjct: 291 PRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFL 350
Query: 205 --LTYTRLLNACCLVGEFTKAFHLHDEMIH--KGFLPDFVTGFSPAIVTYNALIHGLCFL 260
+ T L A + + +K HD+ H K + G+ + +Y+ +I LC
Sbjct: 351 VYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKA 410
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYE 319
RV E+ L+ M + GL+PD Y+ +I K E A DE + +L+
Sbjct: 411 GRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT-- 468
Query: 320 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
TY+ ++ EG + +L+L M G Y LI GL K+ + A
Sbjct: 469 -TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Query: 380 IASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKD 415
++ + + +L CSN +L+++
Sbjct: 528 CMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 128/356 (35%), Gaps = 14/356 (3%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+ + +K + LD Y S+I K SA +L E + G N L+
Sbjct: 104 LFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLT 163
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
D A + M +G+S + + I FC + + +
Sbjct: 164 SDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGS 223
Query: 171 TYSSL-MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
+ L + +LC R +AF + E+ PD + Y + A + G +L++
Sbjct: 224 IIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTG------NLYER 277
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
+ G +P Y A I L R+ EA E+ + D +I
Sbjct: 278 QV--VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI 335
Query: 290 SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
+ D A+ +L Y L T S + + ++ +S G
Sbjct: 336 GSVSAVDPDSAVEFL---VYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKG 392
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSE 405
Y S +YS++I+ L K R RE+ L + +G P ++Y+ L+E C +E
Sbjct: 393 YFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGL--APDVSLYNALIEACCKAE 446
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVI-GWFCNLNKIDSAHTLLSEMIAKG 94
L+ LC+E + +A + +K + D +T++ ++ GW + A EM KG
Sbjct: 187 LRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW----KSSEEAEAFFEEMKGKG 241
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P VVTYNSL+ YC+ ++KA ++ M E +PDV +Y VI
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+ G +PD A Y++ + C+ +RL +A L EM++ G+SP+ TY
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPD 238
L + +++ L+ M+ LP+
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPN 385
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
MK KGL D TY+S+I +C +I+ A+ L+ +M + +P V+TY +++
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
DKA +L+ M E G PDV +YN I FC V KG+ P+A TY+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
L + L +++L+ ML P+ + L+ + A L ++M+
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV--- 413
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV 288
V GF + + L+ LC L +VEEA + L M E G P V + +
Sbjct: 414 -----VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
F D A +++L+ LC E+ +++A +++ L+ PD T+ LL+ G +
Sbjct: 177 FFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLS-----GWKSSEEA 230
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
KG G P +VTYN+LI C +E+A +++ M E +PD + Y
Sbjct: 231 EAFFEEMKG------KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITY 284
Query: 286 STVISGLK-IETEDKAIWWLDEDTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLD 342
+TVI GL I DKA + + + Y D Y++ + ++ + A +L
Sbjct: 285 TTVIGGLGLIGQPDKA-----REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339
Query: 343 HDMSRDGYLSSYVAYSVLINGL 364
+M + G + Y++ L
Sbjct: 340 DEMVKKGLSPNATTYNLFFRVL 361
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Query: 39 LCR-EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
LC+ +G I A++ML + + + +S VI C + + A LL +MI+KG +P
Sbjct: 346 LCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAP 405
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+N +V A + +D+A +L+ M RGL PDV +Y +IS +
Sbjct: 406 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 465
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
K TY +L+ C + EA L EM R GV P+ Y +L+ + CL
Sbjct: 466 AEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 218 G-EFTKAFHLHDEMIHKGF 235
++ KA L +EM KG
Sbjct: 526 ALDWEKAEVLFEEMKQKGL 544
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 42/322 (13%)
Query: 3 LNVNIYNGMIRGFATAAGKSD------SESKKVG------EAFQSLKRLCREGRIPEAEQ 50
LN+ I N +I F GKS S++++ G + +L+ LC+ + A
Sbjct: 229 LNLEILNELIALFGKL-GKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACS 287
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTL--LSEMIAKGFSPSVVTYNSLVFA 108
+ E M G+ + ++I WFC K + A+++ L++ K P V +L+ A
Sbjct: 288 VCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITA 345
Query: 109 YCRRDSV----DKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
C+ D + +G L A R G+ P ++ VI C + K
Sbjct: 346 LCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISK 401
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G P A ++ ++ A L EA ++ + M G+ PD TYT +++ G +A
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461
Query: 224 FHLHDEMI--HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+ E HK P VTY+ALI G C ++ +EAL++L M G+ P+
Sbjct: 462 QEILAEAKKKHKKLSP----------VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN 511
Query: 282 AVCYSTVISGLKIETEDKAIWW 303
A Y+ +I + KA+ W
Sbjct: 512 ADEYNKLIQSFCL----KALDW 529
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 127/341 (37%), Gaps = 62/341 (18%)
Query: 68 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 127
+ +I F L K +A + S+ GF+P+ TY + A C+R +D A + M +
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 128 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC------- 180
G+ + + +I+ FC K ++L+ ALC
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 181 -VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
++ L DL E R G+ P ++ ++++ C + A L +MI KG P
Sbjct: 355 FAQEMLG---DLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKG--P-- 403
Query: 240 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDK 299
+P +N ++H ++EA E+L+ M GL PD Y+ +ISG
Sbjct: 404 ----APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISG-------- 451
Query: 300 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
Y G M A ++ + + S V Y
Sbjct: 452 -----------------------------YAKGGMMDEAQEILAEAKKKHKKLSPVTYHA 482
Query: 360 LINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN 400
LI G K EA + L D F P+ Y+ L+++
Sbjct: 483 LIRGYCKIEEYDEALK--LLNEMDRFGVQPNADEYNKLIQS 521
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 8/224 (3%)
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
LE+ K G+ D TY+ +I C S++++++EM K P+ ++ ++ + +
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+ D+ ++R M E G+ V +YN +I C + + P++ T
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
YS L+ C E+ L EA +LF M+ G PD Y L++ C G+F A L E +
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
K ++P F +++ + L++GL +V+EA E++ + E
Sbjct: 350 EKNWVPSF------SVMKW--LVNGLASRSKVDEAKELIAVVKE 385
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 47/289 (16%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXXXXXX 156
+V + N+L+FA +A + M + G+ PD+++YNR+I C
Sbjct: 145 TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSI 204
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
K I P AA++ +++ E++ E + R M GV TY ++ C
Sbjct: 205 VAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCK 264
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
+ +A L D ++ P VTY+ LIHG C + ++EA+ + M
Sbjct: 265 RKKSAEAKALIDGVMS--------CRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCN 316
Query: 277 GLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 336
G PD+ CY T+I L G+ +
Sbjct: 317 GYKPDSECYFTLIHCL-------------------------------------CKGGDFE 339
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGF 385
AL L + ++ S+ L+NGL +++ EAK +L+ + + F
Sbjct: 340 TALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAK-ELIAVVKEKF 387
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+E + E +++ +M G+ + TY+ +I C K A L+ +++ P+ V
Sbjct: 229 KEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSV 288
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TY+ L+ +C +++D+A+ + M G PD + Y +I C
Sbjct: 289 TYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRES 348
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDL 191
++K P + L+ L ++ EA +L
Sbjct: 349 MEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P+ +TYNS++ +C++D VD A +L +MA +G SPDV +++ +I+ +C
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
+GI + TY++L+ C L A DL EM+ GV+PD +T+ +L C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 217 VGEFTKAFHLHDEM 230
E KAF + +++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%)
Query: 60 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 119
+F TY+S+I FC +++D A +L M +KG SP VVT+++L+ YC+ VD +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
I M RG+ + +Y +I FC + G+ PD T+ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 180 CVEQRLSEAFDLFREMLR 197
C ++ L +AF + ++ +
Sbjct: 126 CSKKELRKAFAILEDLQK 143
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 132 PDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDL 191
P +YN +I FC KG PD T+S+L+ C +R+ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 192 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 251
F EM R G+ + +TYT L++ C VG+ A L +EMI G PD+ +T++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFH 119
Query: 252 ALIHGLCFLDRVEEALEILRGMPE 275
++ GLC + +A IL + +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
IFP TY+S+++ C + R+ +A + M G SPD +T++ L+N C
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
+ EM +G + + VTY LIHG C + ++ A ++L M G++PD +
Sbjct: 66 EIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 285 YSTVISGLKIETEDKAIWWLDEDTYDS 311
+ +++GL + E + + + ED S
Sbjct: 118 FHCMLAGLCSKKELRKAFAILEDLQKS 144
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 61/107 (57%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C++ R+ +A++ML+ M KG D T+S++I +C ++D+ + EM +G +
Sbjct: 20 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 79
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
VTY +L+ +C+ +D A +L M G++PD +++ +++ C
Sbjct: 80 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWW 303
P +TYN++I G C DRV++A +L M G SPD V +ST+I+G K + D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 304 LDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
E ++ + TY+++++ + G++ A L ++M G Y+ + ++ G
Sbjct: 68 FCEMHRRGIVANTV---TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 364 LHKKARTREA 373
L K R+A
Sbjct: 125 LCSKKELRKA 134
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 8 YNGMIRGFATAAGKSDSE-------SKKVGEAFQSLKRL----CREGRIPEAEQMLEVMK 56
YN MI GF D++ SK + L C+ R+ ++ M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 57 CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVD 116
+G+ + TY+++I FC + +D+A LL+EMI+ G +P +T++ ++ C + +
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 117 KAVGILRAMAE 127
KA IL + +
Sbjct: 133 KAFAILEDLQK 143
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 195 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 254
MLR + P +TY +++ C A + D M KG PD +VT++ LI
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPD--------VVTFSTLI 52
Query: 255 HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+G C RV+ +EI M G+ + V Y+T+I G
Sbjct: 53 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 90
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 29/290 (10%)
Query: 31 EAFQSLKR-LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSE 89
E+F +L R LC + A+ + K F D +Y+ +I + L +++ +L E
Sbjct: 222 ESFNALLRCLCERSHVSAAKSVFNAKKGNIPF-DSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 90 MIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXX 149
M+ GF P ++Y+ L+ R ++ +V I + +G PD + YN +I F
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
+D+ P+ TYS L+ L +++S+A ++F EML GV P T
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 210 LLNACCLVGEFTKAFHLHD----------EMIHKGFLPDFV-----------------TG 242
L C G A ++ E +K L +G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+ + Y ++ GLC + +E A+ ++ G P+ YS + S L
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 138/351 (39%), Gaps = 35/351 (9%)
Query: 26 SKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT 85
+K VG L+ L R +L+ M C+G+ D + + F ++ + A
Sbjct: 148 TKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIE 207
Query: 86 LLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP-DVDSYNRVISKF 144
L E + G S ++N+L+ C R V A + A++G P D SYN +IS +
Sbjct: 208 LFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGW 265
Query: 145 CXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 204
V+ G PD +YS L+E L R++++ ++F + G PD
Sbjct: 266 SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDA 325
Query: 205 LTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVE 264
Y ++ +F ++ + M+ + P+ + TY+ L+ GL +V
Sbjct: 326 NVYNAMICNFISARDFDESMRYYRRMLDEECEPN--------LETYSKLVSGLIKGRKVS 377
Query: 265 EALEILRGMPEMGLSPDAVCYSTVISGL-----------KIETEDKAIWWLDEDTYDSLM 313
+ALEI M G+ P ++ + L + KA + E Y L+
Sbjct: 378 DALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL 437
Query: 314 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
LS ++N + +M GY S Y +++GL
Sbjct: 438 KRLSRFGKCGMLLNVW-------------DEMQESGYPSDVEVYEYIVDGL 475
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 13/243 (5%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQS------------LKRLCREGRIPEAEQMLEVM 55
YN MI G+ + G+ + K + E +S ++ L R GRI ++ ++ + +
Sbjct: 258 YNIMISGW-SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
K KG D Y+++I F + D + M+ + P++ TY+ LV + V
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
A+ I M RG+ P + C G + Y L
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF 235
++ L + +++ EM G D Y +++ C++G A + +E + KGF
Sbjct: 437 LKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Query: 236 LPD 238
P+
Sbjct: 497 CPN 499
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 161/378 (42%), Gaps = 22/378 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC++GR+ ++ MK K + +D Y +I F K+ SA L +++ G+
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ YN+++ C + VDKA + + E L PD ++ + ++ +
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLE 462
Query: 159 XXVDKGIFPDAATYSSLMEALCV-EQRLSEAFDLF---REMLRGGVSPDELTYTRLLNAC 214
+ G +P + + + LC E++ + A D+F + G VS Y L+ A
Sbjct: 463 RIGELG-YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS----VYNILMEAL 517
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDR--VEEALEILRG 272
+G+ K+ L EM GF PD + +S AI CF+++ V+ A
Sbjct: 518 YKMGDIQKSLSLFYEMRKLGFEPD-SSSYSIAIC---------CFVEKGDVKAACSFHEK 567
Query: 273 MPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 332
+ EM P Y ++ GL E A+ L + ++ +S E Y+ +
Sbjct: 568 IIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNV-ESGPMEFKYALTVCHVCKG 626
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
N ++ +++ +M+++G + V Y +I+G+ K + A+ + ++
Sbjct: 627 SNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMV 686
Query: 393 VYDILLENCSNSEFKSLV 410
VY+ +L + + LV
Sbjct: 687 VYEEMLIEQTKKKTADLV 704
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 27/278 (9%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L R G A+Q+ E+M +G E+ + +I + + + + +M GF P
Sbjct: 168 LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPR 227
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V YN ++ A + D A+ + E GL + ++ ++ C
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ PD Y+++++ L E L + ++ EM R + PD + Y L+ C G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 219 EFTKAFHLHDEMIHKGFLPD----------FV-----------------TGFSPAIVTYN 251
+ + L EM K L D FV +G+ I YN
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
A+I GLC +++V++A ++ + E L PD S ++
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 130/335 (38%), Gaps = 11/335 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + G A + E K GL + T+ ++ C +I+ +L M P
Sbjct: 238 LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD 297
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V Y +++ ++D ++ + M + PDV +Y ++ C
Sbjct: 298 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFM 357
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
K I D Y L+E + ++ A +L+ +++ G D Y ++ C V
Sbjct: 358 EMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVN 417
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
+ KA+ L I + PDF T SP +V Y ++R+ + +L + E+G
Sbjct: 418 QVDKAYKLFQVAIEEELEPDFET-LSPIMVAY-------VVMNRLSDFSNVLERIGELGY 469
Query: 279 SPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRA 338
Y T L E+K LD Y Y+ +M G++Q++
Sbjct: 470 PVSD--YLTQFFKLLCADEEKNAMALDV-FYILKTKGHGSVSVYNILMEALYKMGDIQKS 526
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
L L ++M + G+ +YS+ I +K + A
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA 561
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 99/254 (38%), Gaps = 33/254 (12%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D RT++ +I FC K D A ++ M F+P VVTY S V AYC+ + +L
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M E G +P+V +Y V+ + G PDA YSSL+ L
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH---KGFLPDF 239
R +A ++F +M GV D L Y +++A A L M + P+
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN- 450
Query: 240 VTGFSPA----------------------------IVTYNALIHGLCFLDRVEEALEILR 271
V ++P + TY LI GLC +VEEA
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 272 GMPEMGLSP-DAVC 284
G+ P D+ C
Sbjct: 511 EAVRKGMVPRDSTC 524
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 56/407 (13%)
Query: 114 SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYS 173
++D ++R +A+ G YN+ + F G+ D +
Sbjct: 202 TLDTMSKVMRRLAKSG------KYNKAVDAFLEMEKSY------------GVKTDTIAMN 243
Query: 174 SLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 233
SLM+AL E + A ++F ++ + PD T+ L++ C +F A + D M
Sbjct: 244 SLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMK-- 300
Query: 234 GFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL- 292
VT F+P +VTY + + C E+L M E G +P+ V Y+ V+ L
Sbjct: 301 ------VTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 293 KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLS 352
K + +A+ ++ D + + YSS+++ G + A ++ DM+ G
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKF---YSSLIHILSKTGRFKDAAEIFEDMTNQGVRR 411
Query: 353 SYVAYSVLINGLHKKARTREAKRDLLYIA-SDGFLSMPSYTVYDILLENCSNSEFKSLVE 411
+ Y+ +I+ +R A R L + +G P+ Y LL+ C + + L+
Sbjct: 412 DVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLG 471
Query: 412 LVKDYSMR-DLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMY 470
++ + ++ D+S D +T Y LLI C S V +A +
Sbjct: 472 ILLHHMVKNDVSIDVST----------------------YILLIRGLCMSGKVEEACLFF 509
Query: 471 MEMVHYGHAPHMFSVLALISALDDDRMYNEMSWVINNTLRSCNLSDS 517
E V G P + L+ L+ M E I + ++S + DS
Sbjct: 510 EEAVRKGMVPRDSTCKMLVDELEKKNMA-EAKLKIQSLVQSKTMIDS 555
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + ++ EA + E MK G D + YSS+I + A + +M +G
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAE---RGLSPDVDSYNRVISKFCXXXXXXXXXX 155
V+ YN+++ A + A+ +L+ M + SP+V++Y ++ C
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 472
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
V + D +TY L+ LC+ ++ EA F E +R G+ P + T L++
Sbjct: 473 LLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 140/338 (41%), Gaps = 35/338 (10%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
T++++I + +++ A L SEM+ G VT+N+++ + +A +L+ M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
E+G+SPD +YN ++S G+FPD T+ +++ LC + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA------FHLH------------ 227
+E + EM R + DE + ++ G +A F L
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 228 DEMIHKGFLPDFVTGFSPA---------IVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
D KG + T F ++ YN +I E+AL + +GM G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 279 SPDAVCYSTVISGLK-IETEDKAIWWLDEDTYDSLMDSLSYE--DTYSSVMNDYLAEGNM 335
PD Y+++ L ++ D+A L E ++DS TY++++ Y+ G +
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAE-----MLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA 373
A+ L M + G + V Y LING + EA
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 172/454 (37%), Gaps = 92/454 (20%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
+A + + MK +G + DE TY+S+ ++ +D A +L+EM+ G P TY +++
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
+Y R + AV + AM + G+ P N V+
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKP-----NEVV------------------------- 622
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
Y SL+ + EA FR M GV + + T L+ A VG +A +
Sbjct: 623 -----YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYS 286
+D+M PD + N+++ L V EA I + E G + D + ++
Sbjct: 678 YDKMKDSEGGPD--------VAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFA 728
Query: 287 TVISGLK-IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM 345
T++ K + D+AI +E L+ + +++ VM Y A+G + +L H+M
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSDCT---SFNQVMACYAADGQLSECCELFHEM 785
Query: 346 -SRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG-FLSMPSYT--------VYD 395
L + + L L K EA L ++ L+ P+ T +Y
Sbjct: 786 LVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYA 845
Query: 396 ILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIF 455
LE+C + T GE + YN +I+
Sbjct: 846 YALESC----------------------------------QELTSGEIPREHFAYNAVIY 871
Query: 456 EHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 489
+ S ++ A YM M G P + + L+
Sbjct: 872 TYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 147/363 (40%), Gaps = 49/363 (13%)
Query: 33 FQSLKRLC-REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
F ++ C G + EAE +L+ M+ KG+ D +TY+ ++ + I++A ++
Sbjct: 343 FNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR 402
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
G P VT+ +++ C+R V + ++ M + D S ++ +
Sbjct: 403 KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY------- 455
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLMEALCV--EQRLSEAFDLFRE---------MLRG-- 198
V++G+ A + CV L+ D++ E + G
Sbjct: 456 ---------VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKR 506
Query: 199 ---GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
G D L Y ++ A KA L M ++G PD TYN+L
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE--------CTYNSLFQ 558
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMD 314
L +D V+EA IL M + G P Y+ +I+ +++ A+ D Y+++
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV-----DLYEAMEK 613
Query: 315 S--LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTRE 372
+ E Y S++N + G ++ A+Q M G S+++ + LI K E
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEE 673
Query: 373 AKR 375
A+R
Sbjct: 674 ARR 676
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 170 ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
+T+++L++ RL++A +LF EML+ GV D +T+ +++ C G ++A L +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 230 MIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
M KG PD TYN L+ +E ALE R + ++GL PD V + V
Sbjct: 366 MEEKGISPD--------TKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV- 416
Query: 290 SGLKIETEDKAIWWLDEDTYDSLMDSLSY-EDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
L I + K + ++ + +S+ E + +M Y+ EG + +A L D
Sbjct: 417 --LHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD 474
Query: 349 GYLSSYVAYSVL 360
LSS +V+
Sbjct: 475 CVLSSTTLAAVI 486
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 120/304 (39%), Gaps = 23/304 (7%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVG-----------EAFQSLKRLCR----EGRIPEA 48
NV + G GK+ S K + QSL L G + +A
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 49 EQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFA 108
+ + K L + +++ +I F + ++A + EM+ PSVVTYNSL+
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 109 YCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPD 168
CR D + KA +L M ++ + P+ ++ ++ C +G P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
Y LM L R+ EA L EM + + PD + Y L+N C +A+ +
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTV 288
EM KG P+ TY +I G C ++ + L +L M P + +
Sbjct: 351 EMQMKGCKPN--------AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 289 ISGL 292
++GL
Sbjct: 403 VAGL 406
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P+ V++N L+ + + + A + M E + P V +YN +I C
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
+ K I P+A T+ LM+ LC + +EA L +M G P + Y L++
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
G +A L EM + PD +V YN L++ LC RV EA +L M
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPD--------VVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWLD 305
G P+A Y +I G +IE D + L+
Sbjct: 356 GCKPNAATYRMMIDGFCRIEDFDSGLNVLN 385
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 6/188 (3%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCR + +A+ +LE M K + + T+ ++ C + + A L+ +M +G P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+V Y L+ +R +D+A +L M +R + PDV YN +++ C
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
KG P+AATY +++ C + ++ ML P T+ C+V
Sbjct: 351 EMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFV------CMVA 404
Query: 219 EFTKAFHL 226
K +L
Sbjct: 405 GLIKGGNL 412
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC E R+PEA ++L M+ KG + TY +I FC + DS +L+ M+A P+
Sbjct: 336 LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
T+ +V + ++D A +L M ++ LS ++ ++S C
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 31/251 (12%)
Query: 245 PAIVTYNALIHGLCFLDRV--EEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIW 302
P V++N LI G FLD+ E A ++ M EM + P V Y+++I L +
Sbjct: 184 PNSVSFNILIKG--FLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 303 WLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
L ED + + T+ +M +G A +L DM G V Y +L++
Sbjct: 242 SLLEDMIKKRIRPNAV--TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 363 GLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDL 421
L K+ R EAK LL P +Y+IL+ + C+ ++ + M+
Sbjct: 300 DLGKRGRIDEAK--LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 422 SDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPH 481
+AAT Y ++I CR + N+ M+ H P
Sbjct: 358 KPNAAT----------------------YRMMIDGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 482 MFSVLALISAL 492
+ + +++ L
Sbjct: 396 PATFVCMVAGL 406
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 129/330 (39%), Gaps = 15/330 (4%)
Query: 81 DSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 140
+ A +L + GF +Y+SL++ + + D ILR + R + + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 141 ISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 200
I + + ++L+ L L +A F +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 201 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 260
P+ +++ L+ ++ A + DEM+ P V TYN+LI LC
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVV--------TYNSLIGFLCRN 234
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYE 319
D + +A +L M + + P+AV + ++ GL + E ++A + + Y L
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV-- 292
Query: 320 DTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLY 379
Y +M+D G + A L +M + V Y++L+N L + R EA R L
Sbjct: 293 -NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 380 IASDGFLSMPSYTVYDILLEN-CSNSEFKS 408
+ G P+ Y ++++ C +F S
Sbjct: 352 MQMKG--CKPNAATYRMMIDGFCRIEDFDS 379
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 39/271 (14%)
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF--PDAATY 172
V +A+ M E PDV +YN +I+ C G PD TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 173 SSLMEALC-----------VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
+ L+ + C + +R+ EA +FREML G PD +TY L++ CC
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS-P 280
+A L ++M KG +P+ VTYN+ I + +E A+E++R M ++G P
Sbjct: 301 RALELFEDMKTKGCVPN--------QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVP 352
Query: 281 DAVCYSTVISGL-----KIETEDKAIWWLD------EDTYDSLMDSLSYEDTYSSV---M 326
+ Y+ +I L E D + ++ E TY + D+LS E S++ +
Sbjct: 353 GSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Query: 327 NDYLAEGNMQ---RALQLDHDMSRDGYLSSY 354
+ + EG Q R +++ M+R + Y
Sbjct: 413 HKRMREGIQQRYSRVMKIKPTMARKEVVRKY 443
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 87/216 (40%), Gaps = 14/216 (6%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K L EG + EA MK D Y+++I C + A LL +M GF
Sbjct: 172 MKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGF 231
Query: 96 --SPSVVTYNSLVFAYCR-----------RDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
P TY L+ +YCR R + +A + R M RG PDV +YN +I
Sbjct: 232 RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLID 291
Query: 143 KFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR-GGVS 201
C KG P+ TY+S + V + A ++ R M + G
Sbjct: 292 GCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
Query: 202 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
P TYT L++A +A L EM+ G +P
Sbjct: 352 PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 37/177 (20%)
Query: 40 CREG---RIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 96
CR+ R+ EA +M M +G D TY+ +I C N+I A L +M KG
Sbjct: 256 CRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV 315
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P+ VTYNS + Y + ++ A+ ++R M + G
Sbjct: 316 PNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG--------------------------- 348
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
G+ P ++TY+ L+ AL +R +EA DL EM+ G+ P E TY + +A
Sbjct: 349 ------HGV-PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 90/237 (37%), Gaps = 43/237 (18%)
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
A+ + LM+ L E + EA F M PD Y ++NA C VG F KA L D
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 229 EMIHKGFL--PDFVT--------------------------------------GFSPAIV 248
+M GF PD T GF P +V
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDED 307
TYN LI G C +R+ ALE+ M G P+ V Y++ I + E + AI +
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM--R 342
Query: 308 TYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
T L + TY+ +++ + A L +M G + Y ++ + L
Sbjct: 343 TMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 143/360 (39%), Gaps = 40/360 (11%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL-------- 87
L L R G+ A +L+ M+ G L+ Y SV+ +++ A ++L
Sbjct: 134 LDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASD 193
Query: 88 -------SEMIAKGFSPSVVTYNSLVFAYCR---RDSVDKAVGILRAMAERGLSPDVDSY 137
+I + P V N L+ R R + L+ M + D SY
Sbjct: 194 NHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KRFKFDTWSY 251
Query: 138 NRVISKF-CXXXXXXXXXXXXXXXVDKGIF-----PDAATYSSLMEALCVEQRLSEAFDL 191
N I F C ++ PD TY+SL+ LC+ + +A +
Sbjct: 252 NICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIV 311
Query: 192 FREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYN 251
+ E+ G PD TY L+ CC A ++ EM + GF+PD + YN
Sbjct: 312 WDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD--------TIVYN 363
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWL--DEDTY 309
L+ G +V EA ++ M + G+ Y+ +I GL +A + L D
Sbjct: 364 CLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK 423
Query: 310 DSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
+D++ T+S V EG ++ A++L +M G+ V S L+ G HK+ R
Sbjct: 424 GQFVDAI----TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
TYNS++ ++ ++ A G+L M E + D+ +YN +I
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+G + D Y++L+ AL RL EA LF M G++PD ++Y ++ G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 221 TKAFHLHDEMIHKGFLPDFVT 241
+A+ M+ G LP+ VT
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT 772
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 10 GMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLF-LDERTYS 68
G+ RG A K DS + F S+ +G + A ++ E+ G+ L TY+
Sbjct: 578 GLARGQRVEA-KPDSFDVDMMNTFLSI--YLSKGDLSLACKLFEIFNGMGVTDLTSYTYN 634
Query: 69 SVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER 128
S++ F +A +L +M + + TYN ++ + D A +L + ++
Sbjct: 635 SMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQ 694
Query: 129 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 188
G D+ YN +I+ GI PD +Y++++E +L EA
Sbjct: 695 GGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEA 754
Query: 189 FDLFREMLRGGVSPDELTYTRL 210
+ + ML G P+ +T T L
Sbjct: 755 YKYLKAMLDAGCLPNHVTDTIL 776
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 46/256 (17%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+E R+ +A +L +K + + T++ I +C N+++ A + EM GF
Sbjct: 197 LDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V++Y +++ YC++ K +L M G SP
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG-SP----------------------- 291
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
P++ TY+++M +L ++ EA + M R G PD L Y C
Sbjct: 292 -----------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN------C 334
Query: 216 LVGEFTKAFHLHD-EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
L+ +A L + E + + +P+ G S TYN++I C D ++A+E+L+ M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPEL--GVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 275 EMGL-SPDAVCYSTVI 289
L +PD Y ++
Sbjct: 393 SSNLCNPDVHTYQPLL 408
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 140/345 (40%), Gaps = 30/345 (8%)
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
T + +M EA +F + G+ + + LL+ C +A
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA------- 209
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
+ L + +P T+N IHG C +RVEEAL ++ M G P + Y+T+I
Sbjct: 210 --RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 291 GLKIETEDKAIWWL--DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
+ E ++ + + + S +S+ TY+++M+ A+ + AL++ M R
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSI----TYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS 408
G + Y+ LI+ L + R EA+R + +S+ + T ++ C + E
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 409 LVELVKDYSMRDLSDDAATAHTTMLH--------------LKNKTDGENKT-DGGMYNLL 453
+EL+K+ +L + + +L LK + + D Y L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 454 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 498
I CR++ AY ++ EM+ P + L L+ + M+
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMH 488
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ R+ EA ++ MK G +Y+++I +C + + +LSEM A G P+
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+TY +++ + + ++A+ + M G PD YN +I
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 160 XVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV-SPDELTYTRLLNACCLV 217
+ + G+ + +TY+S++ C +A +L +EM + +PD TY LL +C
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G+ + L EM+ K L S TY LI LC + E A + M
Sbjct: 415 GDVVEVGKLLKEMVTKHHL-------SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 278 LSP 280
++P
Sbjct: 468 ITP 470
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 47 EAEQMLEV---MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS-EMIAKGFSPSVVTY 102
E E+ L V MK G D Y+ +I +++ A + EM G S + TY
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGL-SPDVDSYNRVI-SKFCXXXXXXXXXXXXXXX 160
NS++ YC D DKA+ +L+ M L +PDV +Y ++ S F
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ D +TY+ L++ LC A+ LF EM+ ++P T C L+ E
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT-------CLLLLEE 481
Query: 221 TKAFHLHD 228
K ++H+
Sbjct: 482 VKKKNMHE 489
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 46/256 (17%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC+E R+ +A +L +K + + T++ I +C N+++ A + EM GF
Sbjct: 197 LDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V++Y +++ YC++ K +L M G SP
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG-SP----------------------- 291
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
P++ TY+++M +L ++ EA + M R G PD L Y C
Sbjct: 292 -----------PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN------C 334
Query: 216 LVGEFTKAFHLHD-EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
L+ +A L + E + + +P+ G S TYN++I C D ++A+E+L+ M
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPEL--GVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 275 EMGL-SPDAVCYSTVI 289
L +PD Y ++
Sbjct: 393 SSNLCNPDVHTYQPLL 408
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 140/345 (40%), Gaps = 30/345 (8%)
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
T + +M EA +F + G+ + + LL+ C +A
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA------- 209
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
+ L + +P T+N IHG C +RVEEAL ++ M G P + Y+T+I
Sbjct: 210 --RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 291 GLKIETEDKAIWWL--DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRD 348
+ E ++ + + + S +S+ TY+++M+ A+ + AL++ M R
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSI----TYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 349 GYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKS 408
G + Y+ LI+ L + R EA+R + +S+ + T ++ C + E
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 409 LVELVKDYSMRDLSDDAATAHTTMLH--------------LKNKTDGENKT-DGGMYNLL 453
+EL+K+ +L + + +L LK + + D Y L
Sbjct: 384 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 443
Query: 454 IFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMY 498
I CR++ AY ++ EM+ P + L L+ + M+
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMH 488
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ R+ EA ++ MK G +Y+++I +C + + +LSEM A G P+
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
+TY +++ + + ++A+ + M G PD YN +I
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 160 XVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV-SPDELTYTRLLNACCLV 217
+ + G+ + +TY+S++ C +A +L +EM + +PD TY LL +C
Sbjct: 355 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G+ + L EM+ K L S TY LI LC + E A + M
Sbjct: 415 GDVVEVGKLLKEMVTKHHL-------SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD 467
Query: 278 LSP 280
++P
Sbjct: 468 ITP 470
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 47 EAEQMLEV---MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS-EMIAKGFSPSVVTY 102
E E+ L V MK G D Y+ +I +++ A + EM G S + TY
Sbjct: 309 EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTY 368
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGL-SPDVDSYNRVI-SKFCXXXXXXXXXXXXXXX 160
NS++ YC D DKA+ +L+ M L +PDV +Y ++ S F
Sbjct: 369 NSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ D +TY+ L++ LC A+ LF EM+ ++P T C L+ E
Sbjct: 429 TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT-------CLLLLEE 481
Query: 221 TKAFHLHD 228
K ++H+
Sbjct: 482 VKKKNMHE 489
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 8/258 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L LC A ++ M KGL D+RTY+ ++ +C+ K+ A L EM +GF
Sbjct: 189 LHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGF 248
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
+P + L+ ++ A ++ M + G PD+ ++N +I
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIE 308
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
G+ D TY +L+ A+ ++ EAF L + G P Y ++ C
Sbjct: 309 MYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
G F AF +M V P Y LI + +A L M E
Sbjct: 369 RNGMFDDAFSFFSDMK--------VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTE 420
Query: 276 MGLSPDAVCYSTVISGLK 293
MGL P + C+ V GLK
Sbjct: 421 MGLVPISRCFDMVTDGLK 438
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 126/328 (38%), Gaps = 15/328 (4%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDS 136
K +S +L +M S T ++ Y + VD+AV + + + G VD
Sbjct: 125 KKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV 184
Query: 137 YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML 196
YN ++ C + KG+ PD TY+ L+ C ++ EA + EM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 197 RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 256
R G +P L+ G A + +M GF+PD I T+N LI
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD--------IQTFNILIEA 296
Query: 257 LCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDS 315
+ VE +E+ ++GL D Y T+I + KI D+A L+ D
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG---H 353
Query: 316 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 375
+ Y+ ++ G A DM + + Y++LI + + +A
Sbjct: 354 KPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
Query: 376 DLLYIASDGFLSMPSYTVYDILLENCSN 403
L+ + G + P +D++ + N
Sbjct: 414 YLVEMTEMGLV--PISRCFDMVTDGLKN 439
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 9/251 (3%)
Query: 41 REGRIPEAEQMLE-VMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
+ G + +A ++ V K G Y+S++ C++ A+ L+ MI KG P
Sbjct: 158 KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDK 217
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
TY LV +C + +A L M+ RG +P + +I
Sbjct: 218 RTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
G PD T++ L+EA+ + +++ + G+ D TY L+ A +G+
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+AF L + + G P F + ++P +I G+C ++A M
Sbjct: 338 IDEAFRLLNNCVEDGHKP-FPSLYAP-------IIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 280 PDAVCYSTVIS 290
P+ Y+ +I+
Sbjct: 390 PNRPVYTMLIT 400
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 147/351 (41%), Gaps = 59/351 (16%)
Query: 21 KSDSESKKVGEAFQSLKRLCREG---RIPEAEQML-EVMKCKGLFLDERTYSSVIGWFCN 76
KS +SK++ A +++L G +I ++ EV + +G + Y V G +
Sbjct: 170 KSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGL--D 227
Query: 77 LNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVD 135
+D A +MI K P+ T+NS++ ++ R + I R M E G SP+V
Sbjct: 228 DVSVDEAK----KMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 136 SYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
SYN ++ +C +G+ D Y++++ LC + +A +LFR+M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
G+ LTY L+N C G+ ++ EM KGF D +T AL+
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADG--------LTIEALVE 394
Query: 256 GLC---FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSL 312
GLC RV EA +I++ DAV +A+++ + Y+ L
Sbjct: 395 GLCDDRDGQRVVEAADIVK---------DAV--------------REAMFYPSRNCYELL 431
Query: 313 MDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLING 363
+ L +G M RAL + +M G+ S Y I+G
Sbjct: 432 VKRLC-------------EDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 128/328 (39%), Gaps = 74/328 (22%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP-DVDS 136
+ID A ++ ++ ++G + + T N+L+ RR + R + GL VD
Sbjct: 176 KEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF--GLDDVSVDE 233
Query: 137 YNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREML 196
++I K I P+A T++S+M + E ++REM
Sbjct: 234 AKKMIGK---------------------IKPNATTFNSMMVSFYREGETEMVERIWREME 272
Query: 197 RG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
G SP+ +Y L+ A C G ++A + +EM +G + D IV YN +I
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD--------IVAYNTMIG 324
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDS 315
GLC V +A E+ R M G+ + C
Sbjct: 325 GLCSNFEVVKAKELFRDMGLKGI--ECTCL------------------------------ 352
Query: 316 LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL---HKKARTRE 372
TY ++N Y G++ L + +M R G+ + + L+ GL R E
Sbjct: 353 -----TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVE 407
Query: 373 AKRDLLYIASDGFLSMPSYTVYDILLEN 400
A D++ A + PS Y++L++
Sbjct: 408 AA-DIVKDAVREAMFYPSRNCYELLVKR 434
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 21/280 (7%)
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMI--AKGFSPSVVTYNSLVFAYCRRD--SVDK 117
LD + ++SV+ + ++ ++ L ++ F P T+ L+ CR S+
Sbjct: 83 LDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 118 AVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLME 177
+L M GL PD + + + C +K PD TY+ L++
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 178 ALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 236
LC + L ++ EM V PD +++T L++ C +A +L ++ + GF
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 237 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIET 296
PD YN ++ G C L + EA+ + + M E G+ PD + Y+T+I GL
Sbjct: 263 PD--------CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL---- 310
Query: 297 EDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAEG 333
KA + Y M YE TY+S+MN +G
Sbjct: 311 -SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 11/226 (4%)
Query: 36 LKRLCR--EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
L CR + I ++L +M GL D+ T + C ++D A L+ E+ K
Sbjct: 129 LSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK 188
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER-GLSPDVDSYNRVISKFCXXXXXXX 152
P TYN L+ C+ + + M + + PD+ S+ +I C
Sbjct: 189 HSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE 248
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
+ G PD Y+++M+ C + SEA ++++M GV PD++TY L+
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
G +A M+ G+ PD TY +L++G+C
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPD--------TATYTSLMNGMC 346
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 3 LNVNIYNGMIRGFATA--AGKSDSESKKVGEAFQSLKRLCREGRIPEAEQ----MLEVMK 56
LN+ + NG+ T A +S E+ +V EA +K L + P+ + + K
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 57 CKGL-----FLDER-----------TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
CK L F+DE +++ +I CN + A L+S++ GF P
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
YN+++ +C +AVG+ + M E G+ PD +YN +I
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 161 VDKGIFPDAATYSSLMEALC 180
VD G PD ATY+SLM +C
Sbjct: 327 VDAGYEPDTATYTSLMNGMC 346
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 105 LVFAYCRRDSV-DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
+V C + ++ D+A+ +LR E + D +YN VI F
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G++PD TY+S++ C ++ +A+ L +EM + + +TY+R+L C G+ +A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
L EM + D SP VTY +I C RVEEAL +L M G P+ V
Sbjct: 255 LELLAEMEKE----DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRV 310
Query: 284 CYSTVISGLKIETED 298
+I G+ ED
Sbjct: 311 TACVLIQGVLENDED 325
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 116/292 (39%), Gaps = 46/292 (15%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVT 101
+G + A+ +++ M C GL+ D TY+S+I +CN KID A L EM + VT
Sbjct: 178 KGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVT 237
Query: 102 YNSLVFAYCRRDSVDKAVGILRAMAERG----LSPDVDSYNRVISKFCXXXXXXXXXXXX 157
Y+ ++ C+ +++A+ +L M + +SP+ +Y VI FC
Sbjct: 238 YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Query: 158 XXXVDKGIFPDAAT------------------------------------YSSLMEALCV 181
++G P+ T +SS +L
Sbjct: 298 DRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIR 357
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+R EA +FR ML GV PD L + + CL+ + F L+ E+ K D +
Sbjct: 358 MKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKK----DVKS 413
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
I + L+ GLC EA ++ + M + + +I LK
Sbjct: 414 TIDSDI--HAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALK 463
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 13/235 (5%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D Y+ VI F + ++ A L+ EM G P V+TY S++ YC +D A +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 123 RAMAERGLSPDVDSYNRVISKFCXX--XXXXXXXXXXXXXVDKG--IFPDAATYSSLMEA 178
+ M++ + +Y+R++ C D G I P+A TY+ +++A
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF-HLHDEMIHKGFLP 237
C ++R+ EA + M G P+ +T L+ E KA L D+++ G +
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV- 342
Query: 238 DFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
FS A V+ L + R EEA +I R M G+ PD + S V L
Sbjct: 343 SLSECFSSATVS-------LIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFREL 390
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 96/238 (40%), Gaps = 11/238 (4%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G + ++ + M +G+ D +YS + C K A L EM ++ VV Y
Sbjct: 203 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 262
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
N+++ A V+ + + R M ERG P+V ++N +I C
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+G PD+ TY L L ++ SE LF M+R GV P TY L+ G
Sbjct: 323 RGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQP 379
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
++ M G PD YNA+I L ++ A E M E GLSP
Sbjct: 380 VLYVWKTMKESGDTPD--------SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 14/245 (5%)
Query: 4 NVNIYNGMIRGFATAA--GKSDSESKKVGEAFQS---------LKRLCREGRIPEAEQML 52
N I+N ++RG++ GK KK+ + + +C+ G+ +A ++
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
+ MK + + LD Y++VI ++ + EM +G P+V T+N+++ C
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+ A +L M +RG PD +Y + S+ + G+ P TY
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTY 364
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
LM L +++ M G +PD Y +++A G A +EMI
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Query: 233 KGFLP 237
+G P
Sbjct: 425 RGLSP 429
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 27/257 (10%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLL--SEMIAKGFSPSVVTYNSLVF-AYCRRDSVDKAV 119
DE ++ +++ C + A L +I GFS S ++L+ + + K
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
+ M G++ D+ SY+ + C + + D Y++++ A+
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 180 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
Q + +FREM G P+ T+ ++ C G A+ + DEM +G PD
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 240 VT------------------------GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+T G P + TY L+ ++ L + + M E
Sbjct: 330 ITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 389
Query: 276 MGLSPDAVCYSTVISGL 292
G +PD+ Y+ VI L
Sbjct: 390 SGDTPDSAAYNAVIDAL 406
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+G+ D +YS M+ +C + +A L++EM + D + Y ++ A
Sbjct: 218 EGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEF 277
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
+ EM +G P + T+N +I LC R+ +A +L MP+ G PD+
Sbjct: 278 GIRVFREMRERGC--------EPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 283 VCYSTVISGLKIETEDKAIWWLDEDTYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRALQ 340
+ Y + S L+ +E ++ + ++ S DTY +M + G +Q L
Sbjct: 330 ITYMCLFSRLEKPSEILSL-------FGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLY 382
Query: 341 LDHDMSRDGYLSSYVAYSVLINGLHKKA 368
+ M G AY+ +I+ L +K
Sbjct: 383 VWKTMKESGDTPDSAAYNAVIDALIQKG 410
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 130/314 (41%), Gaps = 61/314 (19%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
++SV+ +C K + A L+ EM +G SP +VT+N L+ Y + D A+ +++ M
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
G++ DV ++ +IS G+ + Y
Sbjct: 310 TFGITADVFTWTAMIS---------------------GLIHNGMRY-------------- 334
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS-- 244
+A D+FR+M GV P+ +T ++AC + + +H + GF+ D + G S
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 245 ---------------------PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ T+N++I G C +A E+ M + L P+ +
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 284 CYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLD 342
++T+ISG +K E +A+ D + + T++ ++ Y+ G AL+L
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA--TWNLIIAGYIQNGKKDEALELF 512
Query: 343 HDMSRDGYLSSYVA 356
M ++ + V
Sbjct: 513 RKMQFSRFMPNSVT 526
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 153/391 (39%), Gaps = 26/391 (6%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
RE R E ++ +M G+ D+ + ++ N +++ + S +I G S +
Sbjct: 158 RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
NS++ Y + +D A R M ER DV ++N V+ +C
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEM 273
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+GI P T++ L+ + A DL ++M G++ D T+T +++ G
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+A + +M F+ G P VT + + L + + E+ +MG
Sbjct: 334 YQALDMFRKM--------FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 281 DAVCYSTVISGL----KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 336
D + ++++ K+E K +DS+ + Y T++S++ Y G
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARK--------VFDSVKNKDVY--TWNSMITGYCQAGYCG 435
Query: 337 RALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDI 396
+A +L M + + ++ +I+G K EA + DG + + T I
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 397 LLENCSNSEFKSLVELVKDYSMRDLSDDAAT 427
+ N + +EL + ++ T
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/482 (21%), Positives = 189/482 (39%), Gaps = 104/482 (21%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS-- 96
LCR G + EAE+ L+ + +G + TY ++ + IDS L ++ F
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLE-----SCIDSGSIHLGRILHARFGLF 110
Query: 97 --PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
P V L+ Y + + A + +M ER L
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL------------------------ 146
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
T+S+++ A E R E LFR M++ GV PD+ + ++L C
Sbjct: 147 ---------------FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGC 191
Query: 215 CLVGEFTKAFHLHDEMIHKGFLP------------------DFVTGF-----SPAIVTYN 251
G+ +H +I G DF T F ++ +N
Sbjct: 192 ANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWN 251
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDE-DTY 309
+++ C + EEA+E+++ M + G+SP V ++ +I G ++ D A+ + + +T+
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 310 DSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
D T++++++ + G +AL DM R +L+ V +V I
Sbjct: 312 GITADVF----TWTAMISGLIHNGMRYQAL----DMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 370 TREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAH 429
+ + S +++ + D+L+ N SLV++ YS +DA
Sbjct: 364 CLKVINQGSEVHS---IAVKMGFIDDVLVGN-------SLVDM---YSKCGKLEDARKVF 410
Query: 430 TTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI 489
+ +KNK D +N +I +C++ KAY ++ M P++ + +I
Sbjct: 411 DS---VKNK-------DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 490 SA 491
S
Sbjct: 461 SG 462
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 107/253 (42%), Gaps = 13/253 (5%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+ G+ EA ++++ M+ +G+ T++ +IG + L K D+A L+ +M G + V
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
T+ +++ +A+ + R M G+ P+ + +S
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
V G D +SL++ +L +A +F + + D T+ ++ C G
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGY 433
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG-L 278
KA+ L M P+ I+T+N +I G EA+++ + M + G +
Sbjct: 434 CGKAYELFTRMQDANLRPN--------IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 279 SPDAVCYSTVISG 291
+ ++ +I+G
Sbjct: 486 QRNTATWNLIIAG 498
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 28/255 (10%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G D +S++ + K++ A + + K V T+NS++ YC+ KA
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG-IFPDAATYSSLME 177
+ M + L P++ ++N +IS + G + + AT++ ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC--------------CLVGEFTKA 223
+ EA +LFR+M P+ +T LL AC C++ A
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 224 FH-----LHDEMIHKGFLPDFVTGF----SPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
H L D G + T F + I+T+N+LI G AL + M
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 275 EMGLSPDAVCYSTVI 289
G++P+ S++I
Sbjct: 618 TQGITPNRGTLSSII 632
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 142/365 (38%), Gaps = 43/365 (11%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
+A M M G+ + T S + L I+ + S + GF V+ NSLV
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
Y + ++ A + ++ + DV ++N +I+ +C D +
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFH 225
P+ T+++++ EA DLF+ M + G V + T+ ++ G+ +A
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNAL-------IHGLCFLDRVEEALEILR-GMPEMG 277
L +M F+P+ VT S N L IHG C L R +A+ ++ + +
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG-CVLRRNLDAIHAVKNALTDTY 569
Query: 278 LSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
+ YS I L +ET+D W +S++ Y+ G+
Sbjct: 570 AKSGDIEYSRTIF-LGMETKDIITW--------------------NSLIGGYVLHGSYGP 608
Query: 338 ALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDIL 397
AL L + M G + S +I E K+ IA+D + +P+
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND-YHIIPA------- 660
Query: 398 LENCS 402
LE+CS
Sbjct: 661 LEHCS 665
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L E ++ +A + E K G L+ TY++++G +C +++ A+ + EM KG P+
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
TY+ ++ R +A + + M+ P V +Y ++ FC
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRL 210
KG+ P +SSL+ ALC E +L EA + F EML G+ P ++RL
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 25/295 (8%)
Query: 37 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 96
+R R ++ EA M+ G ++ ++ ++ + A + +M K F
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P + +Y L+ + + ++ + + R M + G PDV +Y +I+ C
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
+ P + SL+ L E++L++A + F G + TY L+ A C
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVT------------------------GFSPAIVTYNA 252
A+ DEM KG P+ T P + TY
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEI 409
Query: 253 LIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDE 306
++ C +R++ A++I M G+ P +S++I+ L E + D+A + +E
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C R+ +A + ++ M+ KG+ + RTY ++ + + A+ + M + P+V
Sbjct: 348 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTV 404
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
TY +V +C ++ +D A+ I M +G+ P + ++ +I+ C
Sbjct: 405 STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 197
+D GI P +S L + L E R + DL +M R
Sbjct: 465 MLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L L R R EA ++ + M C+ TY ++ FCN ++D A + EM KG
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMSCEPTV---STYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRV 140
P + ++SL+ A C + +D+A M + G+ P ++R+
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 109/280 (38%), Gaps = 35/280 (12%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAH----TLLSEMIAKGFS 96
R G+ AE + M+ G TY ++ F +K A TLL E +
Sbjct: 186 RGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-LK 244
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P Y+ +++ Y + + +KA + +M +G+ +YN ++S F
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSYKEVSKIYD 303
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
D I PD +Y+ L++A +R EA +F EML GV P Y LL+A +
Sbjct: 304 QMQRSD--IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 217 VGEFTKAFHLHDEMIHKGFLPDF---------------------------VTGFSPAIVT 249
G +A + M PD V GF P IVT
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
Y LI G + VE+ +E+ M G+ + +T++
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 20/302 (6%)
Query: 70 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERG 129
+I + L + A +LS + G +P+V++Y +L+ +Y R + A I R M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 130 LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG---IFPDAATYSSLMEALCVEQRLS 186
P +Y ++ F +D+ + PD Y ++
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
+A +F M+ GV +TY L++ E +K ++D+M PD
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD-------- 313
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+V+Y LI R EEAL + M + G+ P Y+ ++ I + +
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS----GMVEQAK 369
Query: 307 DTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+ S+ + D +Y+++++ Y+ +M+ A + + DG+ + V Y LI G
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 365 HK 366
K
Sbjct: 430 AK 431
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 28/250 (11%)
Query: 86 LLSEMIAK----GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
L+ +++AK G+ + + L+ Y +K + M E +P NR++
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 142 SKFCXXXXXXXXXXXXXXXVD-KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 200
G+ P+ +Y+ LM+A C+ LS A+ LF +ML V
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 201 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD---------------------- 238
PD +Y L+ C G+ A L D+M++KGF+PD
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEE 281
Query: 239 -FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE 297
GFSP N L+ G C +VEEA +++ + + G + + + VI + E E
Sbjct: 282 MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 341
Query: 298 DKAIWWLDED 307
+ I ED
Sbjct: 342 SEKIKLFLED 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
++ CR+G++ A ++L+ M KG F+ +RT +IG C+ D L EMI+KGF
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKG-FVPDRT---LIGGLCDQGMFDEGKKYLEEMISKGF 287
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
SP N LV +C V++A ++ + + G + D++ VI C
Sbjct: 288 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G + +A ++ + + G+ + R+Y+ ++ FC + + A+ L +M+ + P V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
L+ +CR+ V+ A+ +L M +G PD +I C +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
KG P + + L++ C ++ EA D+ +++ G + T+ ++ C
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 116/251 (46%), Gaps = 10/251 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK--GFSPS 98
R G++ +A +++ K + D ++++I +D A +L+EM A+ P
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
++ +L+ A C V++A + + + + G+ + Y ++
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK 668
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+K + PD +S+L++ + L EAF + ++ G+ ++Y+ L+ ACC
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK 728
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
++ KA L++++ P I T NALI LC +++ +A+E L + +GL
Sbjct: 729 DWKKALELYEKIKS--------IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Query: 279 SPDAVCYSTVI 289
P+ + YS ++
Sbjct: 781 KPNTITYSMLM 791
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 178/450 (39%), Gaps = 34/450 (7%)
Query: 22 SDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 81
S+ S + +A+ RL R+GRI + +LE + + L ++ Y + C +
Sbjct: 396 SNGRSPETSDAYN---RLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAV 452
Query: 82 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
+++I +P++ T+N L+ ++ A G+LR + E G++ D Y +I
Sbjct: 453 KEAFRFTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLI 509
Query: 142 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS 201
S + G+ + T+ +L++ ++++AF + + V
Sbjct: 510 SSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVK 569
Query: 202 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD 261
PD + + L++AC G +AF + EM + D P ++ AL+ C
Sbjct: 570 PDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPID------PDHISIGALMKACCNAG 623
Query: 262 RVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDS-LSYED 320
+VE A E+ + + + G+ Y+ ++ + W Y + + ++ ++
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD----WDFACSIYKDMKEKDVTPDE 679
Query: 321 TYSSVMNDYLAEGNM-QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL-L 378
+ S + D M A + D G ++YS L+ ++ K+ L L
Sbjct: 680 VFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC---CNAKDWKKALEL 736
Query: 379 YIASDGFLSMPSYTVYDILLEN-CSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 437
Y P+ + + L+ C ++ +E + + L + T ML +
Sbjct: 737 YEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASER 796
Query: 438 KTD--------GENKTDGGMYNLLIFEHCR 459
K D + K DG NL++ CR
Sbjct: 797 KDDFEVSFKLLSQAKGDGVSPNLIM---CR 823
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
MK K + DE +S++I + +D A +L + ++G ++Y+SL+ A C
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
KA+ + + L P + + N +I+ C G+ P+ TYS
Sbjct: 730 WKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
LM A + +F L + GVSP+ L R + + C
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDGVSPN-LIMCRCITSLC 829
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 109/280 (38%), Gaps = 35/280 (12%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAH----TLLSEMIAKGFS 96
R G+ AE + M+ G TY ++ F +K A TLL E +
Sbjct: 193 RGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP-LK 251
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P Y+ +++ Y + + +KA + +M +G+ +YN ++S F
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-FETSYKEVSKIYD 310
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
D I PD +Y+ L++A +R EA +F EML GV P Y LL+A +
Sbjct: 311 QMQRSD--IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 217 VGEFTKAFHLHDEMIHKGFLPDF---------------------------VTGFSPAIVT 249
G +A + M PD V GF P IVT
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
Y LI G + VE+ +E+ M G+ + +T++
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 20/302 (6%)
Query: 70 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERG 129
+I + L + A +LS + G +P+V++Y +L+ +Y R + A I R M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 130 LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG---IFPDAATYSSLMEALCVEQRLS 186
P +Y ++ F +D+ + PD Y ++
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
+A +F M+ GV +TY L++ E +K ++D+M PD
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD-------- 320
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+V+Y LI R EEAL + M + G+ P Y+ ++ I + +
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS----GMVEQAK 376
Query: 307 DTYDSLMDSLSYED--TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+ S+ + D +Y+++++ Y+ +M+ A + + DG+ + V Y LI G
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 365 HK 366
K
Sbjct: 437 AK 438
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 165/413 (39%), Gaps = 48/413 (11%)
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
L+ AY + + + A +L +++ G +P+V SY ++ + G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREML---RGGVSPDELTYTRLLNACCLVGEFT 221
P A TY +++ + EA ++F +L + + PD+ Y ++ G +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
KA + M+ KG +P + VTYN+L + F +E +I M + PD
Sbjct: 272 KARKVFSSMVGKG-VPQ-------STVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPD 320
Query: 282 AVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDS--LSYEDTYSSVMNDYLAEGNMQRA 338
V Y+ +I + E++A+ ++ ++D+ Y+ +++ + G +++A
Sbjct: 321 VVSYALLIKAYGRARREEEAL-----SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
+ M RD +Y+ +++ + A++ I DGF P+ Y L+
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF--EPNIVTYGTLI 433
Query: 399 ENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHC 458
+ + + + ++++ Y LS A+ T+L G
Sbjct: 434 KGYAKA--NDVEKMMEVYEKMRLS--GIKANQTILTTIMDASG----------------- 472
Query: 459 RSHNVHKAYNMYMEMVHYGHAPHMFS---VLALISALDDDRMYNEMSWVINNT 508
R N A Y EM G P + +L+L S D+ E++ + N T
Sbjct: 473 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNET 525
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 174/447 (38%), Gaps = 56/447 (12%)
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
L TY+++I + +I A M+ +G P+ VT+N+++ Y + + +
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL 355
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
++ M + +PD +YN +IS D G+ PD +Y +L+ A +
Sbjct: 356 MKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSI 414
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRL----LNACCLVGEFT--KAFHLHDEMI---- 231
+ EA L EM V DE T + L + A L ++ K FH+ M
Sbjct: 415 RHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGY 474
Query: 232 --------HKGFLPDFVTGF-------SPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
+G+L + F ++ YN +I E+A E+ M
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 277 GLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYLAE 332
G++PD Y+T++ L + K +L++ M Y Y +V++ ++
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEK------MRETGYVSDCIPYCAVISSFVKL 588
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
G + A ++ +M V Y VLIN A T ++ + Y+ + +P +
Sbjct: 589 GQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF---ADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 393 VYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNL 452
V + SL++L Y+ D+A + +L NKT D N
Sbjct: 646 VI-----------YNSLIKL---YTKVGYLDEAEAIYRKLLQSCNKT---QYPDVYTSNC 688
Query: 453 LIFEHCRSHNVHKAYNMYMEMVHYGHA 479
+I + V KA ++ M G A
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRGEA 715
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 15/260 (5%)
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
LE M+ G D Y +VI F L +++ A + EM+ P VV Y L+ A+
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVI---SKFCXXXXXXXXXXXXXXXVDKGIFPD 168
+V +A+ + AM E G+ + YN +I +K +K +PD
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 169 AATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
T + ++ + +A +F M + G +E T+ +L G F +A +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 229 EMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD-RVEEALEILRGMPEMGLSPDAVCYST 287
+M L D ++YN+++ GL LD R +EA+E + M G+ PD + +
Sbjct: 742 QMREMKILTD--------PLSYNSVL-GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 288 VISGL-KIETEDKAIWWLDE 306
+ + L K+ KA+ ++E
Sbjct: 793 LGTILMKLGMSKKAVRKIEE 812
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA---KGFSPSV 99
G + +A +E MK G+ + Y+S+I + + +D A + +++ K P V
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
T N ++ Y R V KA I +M +RG + + ++ ++ +
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ I D +Y+S++ ++ R EA + F+EM+ G+ PD+ T+ L +G
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 220 FTKAFHLHDEMIHK 233
KA +E+ K
Sbjct: 803 SKKAVRKIEEIRKK 816
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/493 (20%), Positives = 189/493 (38%), Gaps = 65/493 (13%)
Query: 48 AEQMLEVMKCKGLF-LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
A ++ E K KG + L+ Y+ ++ K +L EMI KG P TY +L+
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS------KFCXXXXXXXXXXXXXXX 160
Y + A+ L M++ G+ PD + V+ +F
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
D + + TY+++++ ++ EA + F+ ML G+ P +T+ +++ G+
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 221 TKAFHLHDEM-IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ L M +H +P TYN LI + +E A + M + GL
Sbjct: 350 GEVTSLMKTMKLH----------CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLK 399
Query: 280 PDAVCYSTVISGLKI----ETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNM 335
PD V Y T++ I E + I +D+D + +D E T S++ Y+ +
Sbjct: 400 PDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVE--ID----EYTQSALTRMYVEAEML 453
Query: 336 QRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTV-- 393
+++ G +SS YS I+ ++ EA+R + ++ Y V
Sbjct: 454 EKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMI 512
Query: 394 ---------------------YDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 432
Y + + C+ + +LV+++ M H
Sbjct: 513 KAYGISKSCEKACELFESMMSYGVTPDKCT---YNTLVQILASADM---------PHKGR 560
Query: 433 LHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISAL 492
+L+ + +D Y +I + ++ A +Y EMV Y P + LI+A
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 493 -DDDRMYNEMSWV 504
D + MS+V
Sbjct: 621 ADTGNVQQAMSYV 633
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G++ AE++ + M + D Y +I F + + A + + M G + V Y
Sbjct: 589 GQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIY 648
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAE---RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
NSL+ Y + +D+A I R + + + PDV + N +I+ +
Sbjct: 649 NSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDS 708
Query: 160 XVDKGIFPDAATYSSLMEALCVEQ---RLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
+G +A ++ M LC+ + R EA + ++M + D L+Y +L L
Sbjct: 709 MKQRG---EANEFTFAM-MLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFAL 764
Query: 217 VGEFTKAFHLHDEMIHKGFLPD 238
G F +A EM+ G PD
Sbjct: 765 DGRFKEAVETFKEMVSSGIQPD 786
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 49/263 (18%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
TY+ I +C L K + A L EM+ KGF VV Y++++ Y + + AV ++ M
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+RG P++ YN +I M ++ R
Sbjct: 450 KQRGCKPNIWIYNSLID---------------------------------MHGRAMDLRR 476
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM-IHKGFLPDFVTGFS 244
+E +++EM R V PD+++YT +++A E + L+ E +++G + + G
Sbjct: 477 AE--KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIM 534
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWL 304
+ + + R++E + +L+ M G DA YS+ ++ L+ + I WL
Sbjct: 535 VGVFSKTS---------RIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWL 585
Query: 305 DEDTYDSLMDSLSYEDTYSSVMN 327
E ++D+ S S YS+ N
Sbjct: 586 QE-SFDAAQTSTS---KYSNTKN 604
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 139/350 (39%), Gaps = 53/350 (15%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + GR EA ++LE MK KG+ YS +I F ++ L E K
Sbjct: 258 LAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKD 317
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+V Y R +++ + ++ AM + L
Sbjct: 318 PEMCLKVVLMYVREGNMETTLEVVAAMRKAELK--------------------------- 350
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
V I +++ ++ +EA ++ ++ ++TY +NA C +
Sbjct: 351 --VTDCIL------CAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLE 402
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
++ KA L DEM+ K GF +V Y+ ++ R+ +A+ ++ M + G
Sbjct: 403 KYNKAEMLFDEMVKK--------GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGC 454
Query: 279 SPDAVCYSTVIS--GLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQ 336
P+ Y+++I G ++ W + L D +S Y+S+++ Y ++
Sbjct: 455 KPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVS----YTSMISAYNRSKELE 510
Query: 337 RALQL--DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDG 384
R ++L + M+R G + +A +++ K +R E R L + +G
Sbjct: 511 RCVELYQEFRMNR-GKIDRAMA-GIMVGVFSKTSRIDELMRLLQDMKVEG 558
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 7 IYNGM--IRGFATA------AGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCK 58
I NG RGFA A A K + E+ +V A ++ CR + +AE + + M K
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAI-AINAYCRLEKYNKAEMLFDEMVKK 417
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G YS+++ + ++ A L+++M +G P++ YNSL+ + R + +A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX-XXXXXXXXVDKGIFPDAATYSSLME 177
I + M + PD SY +IS + +++G D A ++
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI-DRAMAGIMVG 536
Query: 178 ALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
R+ E L ++M G D Y+ LNA
Sbjct: 537 VFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNA 572
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 56/319 (17%)
Query: 3 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFL 62
+ V +YN I G G ++ EA +R+ R+ P E
Sbjct: 248 IGVTVYNAYIEGLMKRKGNTE-------EAIDVFQRMKRDRCKPTTE------------- 287
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
TY+ +I + +K + L EM + P++ TY +LV A+ R +KA I
Sbjct: 288 ---TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ E GL PDV YN ++ + G PD A+Y+ +++A
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD-FV- 240
S+A +F EM R G++P ++ LL+A + TK + EM G PD FV
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 241 ------------------------TGFSPA-IVTYNALIH---GLCFLDRVEEALEILRG 272
G A I TYN LI+ FL+R+EE L+
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK- 523
Query: 273 MPEMGLSPDAVCYSTVISG 291
E PD V +++ I
Sbjct: 524 --EKNFRPDVVTWTSRIGA 540
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 185/476 (38%), Gaps = 45/476 (9%)
Query: 77 LNKIDSAHTLLSEMIAK--GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDV 134
LNK + L+ E I + F P V+ +N L+ AY ++ +A + + E P
Sbjct: 153 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 135 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA---ATYSSLMEALCVEQ-RLSEAFD 190
D+Y +I +C + + P Y++ +E L + EA D
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 272
Query: 191 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 250
+F+ M R P TY ++N L G+ +K++ M K + P I TY
Sbjct: 273 VFQRMKRDRCKPTTETYNLMIN---LYGKASKSY-----MSWKLYCEMRSHQCKPNICTY 324
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYD 310
AL++ E+A EI + E GL PD Y+ + +E+ +A +
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL-----MESYSRAGYPYGAAEIF 379
Query: 311 SLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
SLM + E +Y+ +++ Y G A + +M R G + ++ +L++ + K
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA-YSK 438
Query: 368 ARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAAT 427
AR ++ S+ + ++ + +L +F + ++
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI--------------- 483
Query: 428 AHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLA 487
L +G D YN+LI + ++ + + +++E+ P + + +
Sbjct: 484 -------LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Query: 488 LISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 543
I A ++Y + V + S D KVL ++ ++ + VL M
Sbjct: 537 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G +AE + E MK G+ +++ ++ + + ++ EM G P
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
NS++ Y R K IL M + D+ +YN +I+ +
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+K PD T++S + A ++ + ++F EM+ G +PD T LL+AC
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS---VVTYNSLVFAYCRRD-SVDKAV 119
E TY+ +I +C I+ A +L EM SP V YN+ + +R + ++A+
Sbjct: 212 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 271
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
+ + M P ++YN +I+ + P+ TY++L+ A
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 331
Query: 180 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
E +A ++F ++ G+ PD Y L+ + G A + M H G PD
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 240 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+YN ++ +A + M +G++P
Sbjct: 392 --------ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 8/233 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G A ++ +M+ G D +Y+ ++ + A + EM G +P++
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
++ L+ AY + V K I++ M+E G+ PD N +++ +
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ D +TY+ L+ L +LF E+ PD +T+T + A +
Sbjct: 488 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 547
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
K + +EMI G PD T L+ ++VE+ +LR M
Sbjct: 548 VKCLEVFEEMIDSGCAPDGGTA--------KVLLSACSSEEQVEQVTSVLRTM 592
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----------------CREGRIPEAEQM 51
YN M+ + A SD+E+ F+ +KRL + + + E +
Sbjct: 394 YNIMVDAYGRAGLHSDAEA-----VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAI 448
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
++ M G+ D +S++ + L + +L+EM + + TYN L+ Y +
Sbjct: 449 VKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 508
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+++ + + E+ PDV ++ I + +D G PD T
Sbjct: 509 AGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRG 198
L+ A E+++ + + R M +G
Sbjct: 569 AKVLLSACSSEEQVEQVTSVLRTMHKG 595
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 52/286 (18%)
Query: 31 EAFQSLK-RLCREGRIPEAEQMLEVMKCKGLF-LDERTYSSVIGWFCNL----------- 77
EAFQ L LCR G I +AE+ + + K LF +D ++ ++ +CN+
Sbjct: 225 EAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIW 282
Query: 78 ----------NKIDSAH---------------TLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
NK +H L EM +G +P + YNSLV+ R
Sbjct: 283 REMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRE 342
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
D D+A+ +++ + E GL PD +YN +I C + + + P T+
Sbjct: 343 DCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF 402
Query: 173 SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIH 232
+ +EA+ E+ L ++ +M + P E T+ +L + A + EM
Sbjct: 403 HAFLEAVNFEKTL----EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEM-- 456
Query: 233 KGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
F +PA+ Y A I GL +E+A EI M G
Sbjct: 457 ----DRFEIVANPAL--YLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 139/324 (42%), Gaps = 74/324 (22%)
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSP-DVDSYNRVISKFCXXXXXXXXX 154
+P + L+ A CR ++KA + +A + L P DV+ +N +++ +C
Sbjct: 221 TPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWC--------- 269
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
I+ D ++EA ++REM ++P++ +Y+ +++
Sbjct: 270 ---------NIWTD----------------VTEAKRIWREMGNYCITPNKDSYSHMISCF 304
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
VG + L+DEM +G +P I YN+L++ L D +EA+++++ +
Sbjct: 305 SKVGNLFDSLRLYDEMKKRGL--------APGIEVYNSLVYVLTREDCFDEAMKLMKKLN 356
Query: 275 EMGLSPDAVCYSTVISGL----KIETEDKAIWWL-------DEDTYDSLMDSLSY----- 318
E GL PD+V Y+++I L K++ + + DT+ + ++++++
Sbjct: 357 EEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLE 416
Query: 319 -------------EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLH 365
E+T+ ++ + AL++ +M R +++ Y I GL
Sbjct: 417 VLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLL 476
Query: 366 KKARTREAKRDLLYIASDGFLSMP 389
+A+ + S GF+ P
Sbjct: 477 SCGWLEKAREIYSEMKSKGFVGNP 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 17/209 (8%)
Query: 28 KVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL 87
KVG F SL+ + + MK +GL Y+S++ + D A L+
Sbjct: 306 KVGNLFDSLR-------------LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 88 SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXX 147
++ +G P VTYNS++ C +D A +L M LSP VD+++ +
Sbjct: 353 KKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLE--AVN 410
Query: 148 XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTY 207
D G P T+ ++ L ++ A ++ EM R + + Y
Sbjct: 411 FEKTLEVLGQMKISDLG--PTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 208 TRLLNACCLVGEFTKAFHLHDEMIHKGFL 236
+ G KA ++ EM KGF+
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMKSKGFV 497
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 56/319 (17%)
Query: 3 LNVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFL 62
+ V +YN I G G ++ EA +R+ R+ P E
Sbjct: 226 IGVTVYNAYIEGLMKRKGNTE-------EAIDVFQRMKRDRCKPTTE------------- 265
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
TY+ +I + +K + L EM + P++ TY +LV A+ R +KA I
Sbjct: 266 ---TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ E GL PDV YN ++ + G PD A+Y+ +++A
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD-FV- 240
S+A +F EM R G++P ++ LL+A + TK + EM G PD FV
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 241 ------------------------TGFSPA-IVTYNALIH---GLCFLDRVEEALEILRG 272
G A I TYN LI+ FL+R+EE L+
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK- 501
Query: 273 MPEMGLSPDAVCYSTVISG 291
E PD V +++ I
Sbjct: 502 --EKNFRPDVVTWTSRIGA 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 185/476 (38%), Gaps = 45/476 (9%)
Query: 77 LNKIDSAHTLLSEMIAK--GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDV 134
LNK + L+ E I + F P V+ +N L+ AY ++ +A + + E P
Sbjct: 131 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 135 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA---ATYSSLMEALCVEQ-RLSEAFD 190
D+Y +I +C + + P Y++ +E L + EA D
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 250
Query: 191 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTY 250
+F+ M R P TY ++N L G+ +K++ M K + P I TY
Sbjct: 251 VFQRMKRDRCKPTTETYNLMIN---LYGKASKSY-----MSWKLYCEMRSHQCKPNICTY 302
Query: 251 NALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYD 310
AL++ E+A EI + E GL PD Y+ + +E+ +A +
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL-----MESYSRAGYPYGAAEIF 357
Query: 311 SLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
SLM + E +Y+ +++ Y G A + +M R G + ++ +L++ + K
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA-YSK 416
Query: 368 ARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAAT 427
AR ++ S+ + ++ + +L +F + ++
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI--------------- 461
Query: 428 AHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLA 487
L +G D YN+LI + ++ + + +++E+ P + + +
Sbjct: 462 -------LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 514
Query: 488 LISALDDDRMYNEMSWVINNTLRSCNLSDSEQLKVLSEINVTKSEIYALLDVLAEM 543
I A ++Y + V + S D KVL ++ ++ + VL M
Sbjct: 515 RIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G +AE + E MK G+ +++ ++ + + ++ EM G P
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
NS++ Y R K IL M + D+ +YN +I+ +
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
+K PD T++S + A ++ + ++F EM+ G +PD T LL+AC
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS---VVTYNSLVFAYCRRD-SVDKAV 119
E TY+ +I +C I+ A +L EM SP V YN+ + +R + ++A+
Sbjct: 190 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 249
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
+ + M P ++YN +I+ + P+ TY++L+ A
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 180 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
E +A ++F ++ G+ PD Y L+ + G A + M H G PD
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 240 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+YN ++ +A + M +G++P
Sbjct: 370 --------ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 8/233 (3%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G A ++ +M+ G D +Y+ ++ + A + EM G +P++
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
++ L+ AY + V K I++ M+E G+ PD N +++ +
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ D +TY+ L+ L +LF E+ PD +T+T + A +
Sbjct: 466 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 525
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
K + +EMI G PD T L+ ++VE+ +LR M
Sbjct: 526 VKCLEVFEEMIDSGCAPDGGTA--------KVLLSACSSEEQVEQVTSVLRTM 570
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 21/207 (10%)
Query: 8 YNGMIRGFATAAGKSDSESKKVGEAFQSLKRL----------------CREGRIPEAEQM 51
YN M+ + A SD+E+ F+ +KRL + + + E +
Sbjct: 372 YNIMVDAYGRAGLHSDAEA-----VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAI 426
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
++ M G+ D +S++ + L + +L+EM + + TYN L+ Y +
Sbjct: 427 VKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 486
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+++ + + E+ PDV ++ I + +D G PD T
Sbjct: 487 AGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRG 198
L+ A E+++ + + R M +G
Sbjct: 547 AKVLLSACSSEEQVEQVTSVLRTMHKG 573
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 140/345 (40%), Gaps = 20/345 (5%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
L+ + R + A + + M+ + L D TYS++I F DSA + L +M
Sbjct: 162 LRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRV 221
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
S +V Y++L+ R KA+ I + G++PD+ +YN +I+ +
Sbjct: 222 SGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARL 281
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ P+ +YS+L+ + EA +F EM + D L C
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD-------LTTCN 334
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
++ + + E + F P +V+YN ++ + EA+ + R M
Sbjct: 335 IMIDVYGQLDMVKEA-DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 276 MGLSPDAVCYSTVIS--GLKIETEDKAIWWLDEDTYDSLMDSLSYED---TYSSVMNDYL 330
+ + V Y+T+I G +E E KA + E M S E TYS++++ +
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHE-KATNLVQE------MQSRGIEPNAITYSTIISIWG 446
Query: 331 AEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKR 375
G + RA L + G V Y +I + AKR
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 43/302 (14%)
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
++PSV YN ++ R D A G+ M +R L+PD +Y+ +I+ F
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRL---SEAFDLFREMLRGGVSPDELTYTRLL 211
+ D YS+L+E + +RL S+A +F + R G++PD + Y ++
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIE---LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVT------------GFSPA------------- 246
N F +A L EM G LP+ V+ F A
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 247 --IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWW 303
+ T N +I LD V+EA + + +M + P+ V Y+T++ + E +AI
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 304 LDEDTYDSLMDSLSYED---TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 360
LM E TY++++ Y ++A L +M G + + YS +
Sbjct: 388 F------RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 441
Query: 361 IN 362
I+
Sbjct: 442 IS 443
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
+Y+++I C + + A LL E+ KG P +VT+N+L+ + + + I M
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
E+ ++ D+ +YN + G+ PD ++++++ E ++
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
EA ++E+++ G PD+ T+ LL A C G+F A L E K +L
Sbjct: 302 DEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL--------V 353
Query: 246 AIVTYNALIHGLCFLDRVEEALEILR 271
T L+ L + EEA EI++
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 148/356 (41%), Gaps = 46/356 (12%)
Query: 34 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
++++RL R+ E++LE K E + +I + ++A + EM +
Sbjct: 79 RTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNR 138
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
SV+++N+L+ AY + K ++ + +N + K
Sbjct: 139 DCKRSVLSFNALLSAY----RLSKKFDVVEEL-----------FNELPGKL--------- 174
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
I PD +Y++L++ALC + L EA L E+ G+ PD +T+ LL +
Sbjct: 175 ----------SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
L G+F + +M+ K D I TYNA + GL + +E + + +
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAID--------IRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 274 PEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 332
GL PD ++ +I G E + D+A W E + T++ ++
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA---TFALLLPAMCKA 333
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSM 388
G+ + A++L + YL L++ L K ++ EA+ + ++ FL +
Sbjct: 334 GDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLKL 389
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 28/332 (8%)
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
LM+ LC R A +F+EM G PD +Y L+ CL G+ +A HL ++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL----LYSM 213
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
F G IV Y L+ LC V++A+EIL + GL CY + +G
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG-HW 272
Query: 295 ETEDKAIWWLDEDTYDSLM-DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 353
E+ + I + ++L+ ++ D+YS++ D EG + ++ M G+ +
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 354 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELV 413
Y + L + + +EA + G +P+ VY++L+
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGH-CLPTVGVYNVLI--------------- 376
Query: 414 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 473
+ L DD + K + Y L+ CR +A + EM
Sbjct: 377 -----KGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 474 VHYGHAPHMFSVLALISALDD-DRMYNEMSWV 504
+ H P + + +I L D DR Y + W+
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 12/257 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIG--WFCNLNKIDSAHTLLSEMIAK 93
L LC G + +A ++L + KGL +R Y + W + I+ LL+E + +
Sbjct: 233 LDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
G P + +Y+++ + + +L AM +G P Y + C
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 154 XXXXXXXVDKG-IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLL 211
+ +G P Y+ L++ LC + + EA ++M + +E TY L+
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
+ C G+F +A + +EM+ K P + TY+ +I GLC +DR EA+ L
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFP--------GVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 272 GMPEMGLSPDAVCYSTV 288
M + P++ + +
Sbjct: 465 EMVSQDMVPESSVWKAL 481
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 141/371 (38%), Gaps = 51/371 (13%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI---- 91
+K LC+ R A Q+ + M +G + D +Y ++ FC K++ A LL M
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX- 150
KG +V Y L+ A C VD A+ IL + +GL Y+ + +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 151 -XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
+ +G P +YS++ L E +L E ++ M G P Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
+ A C G+ +A + ++ + +G P + YN LI GLC + EA+
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHC-------LPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 270 LRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 329
L+ M S C + +E+TY +L+D L
Sbjct: 392 LKKM-----SKQVSCVA------------------NEETYQTLVDGLC------------ 416
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
+G A Q+ +M + Y ++I GL R EA L + S + P
Sbjct: 417 -RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV--P 473
Query: 390 SYTVYDILLEN 400
+V+ L E+
Sbjct: 474 ESSVWKALAES 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDS 136
K+ +L M +KGF P+ Y + V A CR + +AV ++ + M + P V
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 137 YNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
YN +I C + + TY +L++ LC + + EA + EM
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
L P TY ++ C + +A +EM+ + +P+ + AL
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES--------SVWKALAE 483
Query: 256 GLCF--LDRVE 264
+CF +D VE
Sbjct: 484 SVCFCAIDVVE 494
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 28/332 (8%)
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG 234
LM+ LC R A +F+EM G PD +Y L+ CL G+ +A HL ++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL----LYSM 213
Query: 235 FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
F G IV Y L+ LC V++A+EIL + GL CY + +G
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG-HW 272
Query: 295 ETEDKAIWWLDEDTYDSLM-DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSS 353
E+ + I + ++L+ ++ D+YS++ D EG + ++ M G+ +
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 354 YVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELV 413
Y + L + + +EA + G +P+ VY++L+
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGH-CLPTVGVYNVLI--------------- 376
Query: 414 KDYSMRDLSDDAATAHTTMLHLKNKTDGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEM 473
+ L DD + K + Y L+ CR +A + EM
Sbjct: 377 -----KGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 474 VHYGHAPHMFSVLALISALDD-DRMYNEMSWV 504
+ H P + + +I L D DR Y + W+
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 12/257 (4%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIG--WFCNLNKIDSAHTLLSEMIAK 93
L LC G + +A ++L + KGL +R Y + W + I+ LL+E + +
Sbjct: 233 LDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
G P + +Y+++ + + +L AM +G P Y + C
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 154 XXXXXXXVDKG-IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLL 211
+ +G P Y+ L++ LC + + EA ++M + +E TY L+
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
+ C G+F +A + +EM+ K P + TY+ +I GLC +DR EA+ L
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFP--------GVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 272 GMPEMGLSPDAVCYSTV 288
M + P++ + +
Sbjct: 465 EMVSQDMVPESSVWKAL 481
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 141/371 (38%), Gaps = 51/371 (13%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI---- 91
+K LC+ R A Q+ + M +G + D +Y ++ FC K++ A LL M
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXX- 150
KG +V Y L+ A C VD A+ IL + +GL Y+ + +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Query: 151 -XXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTR 209
+ +G P +YS++ L E +L E ++ M G P Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEI 269
+ A C G+ +A + ++ + +G P + YN LI GLC + EA+
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHC-------LPTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 270 LRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 329
L+ M S C + +E+TY +L+D L
Sbjct: 392 LKKM-----SKQVSCVA------------------NEETYQTLVDGLC------------ 416
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMP 389
+G A Q+ +M + Y ++I GL R EA L + S + P
Sbjct: 417 -RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV--P 473
Query: 390 SYTVYDILLEN 400
+V+ L E+
Sbjct: 474 ESSVWKALAES 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL-RAMAERGLSPDVDS 136
K+ +L M +KGF P+ Y + V A CR + +AV ++ + M + P V
Sbjct: 312 GKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGV 371
Query: 137 YNRVISKFCXXXXXXXXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
YN +I C + + TY +L++ LC + + EA + EM
Sbjct: 372 YNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Query: 196 LRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIH 255
L P TY ++ C + +A +EM+ + +P+ + AL
Sbjct: 432 LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPES--------SVWKALAE 483
Query: 256 GLCF--LDRVE 264
+CF +D VE
Sbjct: 484 SVCFCAIDVVE 494
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 145/349 (41%), Gaps = 19/349 (5%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
T S+ G NL+ +D L+SEM G + T+ L+ Y + + K + + M
Sbjct: 194 TMLSIAGEARNLDMVDE---LVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 250
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+ G D +YN +I C ++KGI TY L++ + +++
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
+ +M+R + + LL + C+ G+ +A L E+ +K D
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD------- 363
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWL 304
+ L+ GLC +R+ +ALEI+ M L D+ Y +ISG L+ KA+
Sbjct: 364 -AKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQF 421
Query: 305 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
+ +S TY+ +M ++ L ++M +G VA + ++ G
Sbjct: 422 EVIKKSGRPPRVS---TYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGH 478
Query: 365 HKKARTREAKRDLLYIASDGFLSMPSYTVYDILL-ENCSNSEFKSLVEL 412
+ R EA + + G P++ Y I + E C +S + ++++
Sbjct: 479 LGQNRVAEAWKVFSSMEEKGI--KPTWKSYSIFVKELCRSSRYDEIIKI 525
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 39 LC-REGR-IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 96
LC ++GR + EA + M G D +G C + A + L + GF
Sbjct: 758 LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF- 816
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P V Y+ + A CR +++A+ L + ER L D +Y ++
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSL-LDQYTYGSIVHGLLQRGDLQKALD 875
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G P Y+SL+ E++L + + ++M P +TYT ++
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYM 935
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE 275
+G+ +A++ M +G PDF T Y+ I+ LC + E+AL++L M +
Sbjct: 936 SLGKVEEAWNAFRNMEERGTSPDFKT--------YSKFINCLCQACKSEDALKLLSEMLD 987
Query: 276 MGLSPDAVCYSTVISGLKIE 295
G++P + + TV GL E
Sbjct: 988 KGIAPSTINFRTVFYGLNRE 1007
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 104/273 (38%), Gaps = 42/273 (15%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRD- 113
M+ +G + + T++ +I + + A EM G PS T+ L+ C +
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 114 -SVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATY 172
+V++A R M G PD + + C G FP Y
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAY 822
Query: 173 SSLMEALC----VEQRLSE--AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
S + ALC +E+ LSE +F+ R +L D+ TY +++ G+ KA
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLL------DQYTYGSIVHGLLQRGDLQKALDK 876
Query: 227 HDEMIHKGFLP------DFVTGF---------------------SPAIVTYNALIHGLCF 259
+ M G P + F P++VTY A+I G
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 260 LDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
L +VEEA R M E G SPD YS I+ L
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 101/276 (36%), Gaps = 42/276 (15%)
Query: 51 MLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYC 110
+ E M+ G LD Y+ +I C + D A EM+ KG + + TY L+
Sbjct: 246 VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIA 305
Query: 111 RRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAA 170
+ + VD I M + D++ ++ FC +K + DA
Sbjct: 306 KSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 171 TYSSLMEALCVEQRL----------------------------------SEAFDLFREML 196
+ L++ LC R+ S+A + F +
Sbjct: 366 YFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIK 425
Query: 197 RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 256
+ G P TYT ++ + +F K +L +EMI G PD V A++ G
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS--------VAITAVVAG 477
Query: 257 LCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+RV EA ++ M E G+ P YS + L
Sbjct: 478 HLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKEL 513
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 122/327 (37%), Gaps = 68/327 (20%)
Query: 94 GFSPSVVTYN-SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
G+ + YN S+ A C +D + + M +G D++ +I ++
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKD-FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNI 731
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQ--RLSEAFDLFREMLRGGVSPDELTYTRL 210
D G+ P ++T+ L+ LC ++ + EA FREM+R G PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
L C VG A D + GF P V Y+ I LC + ++EEAL L
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF---------PVTVAYSIYIRALCRIGKLEEALSEL 842
Query: 271 ------------------------RG-----------MPEMGLSPDAVCYSTVISGLKIE 295
RG M E+G P Y+++I
Sbjct: 843 ASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI------ 896
Query: 296 TEDKAIWWLDEDTYDSLMDSLSYED---------TYSSVMNDYLAEGNMQRALQLDHDMS 346
+++ E + ++++ + TY++++ Y++ G ++ A +M
Sbjct: 897 -----VYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 347 RDGYLSSYVAYSVLINGLHKKARTREA 373
G + YS IN L + ++ +A
Sbjct: 952 ERGTSPDFKTYSKFINCLCQACKSEDA 978
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/358 (18%), Positives = 143/358 (39%), Gaps = 17/358 (4%)
Query: 15 FATAAGKSDSESKKVGEAFQSLKRLCREGR-IPEAEQMLEVMKCKGLFLDERTYSSVIGW 73
F + D S +VG + ++ + E R + ++++ M+ G D RT++ +I
Sbjct: 175 FFNWVKQKDGFSHRVG-IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISV 233
Query: 74 FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 133
+ KI + +M GF YN ++ + C D A+ + M E+G++
Sbjct: 234 YGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFG 293
Query: 134 VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFR 193
+ +Y ++ V + + L+++ CV ++ EA +L R
Sbjct: 294 LRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIR 353
Query: 194 EMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNAL 253
E+ + D + L+ C A + D M + V Y +
Sbjct: 354 ELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV---------YGII 404
Query: 254 IHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL-KIETEDKAIWWLDEDTYDSL 312
I G + V +ALE + + G P Y+ ++ L K++ +K +E + +
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 313 M-DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
DS++ ++V+ +L + + A ++ M G ++ +YS+ + L + +R
Sbjct: 465 EPDSVA----ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR 518
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 10/246 (4%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G+ ++ Y+ VI +D EMI GF+P+ VT+N L+ Y + + K
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA-KLFKK 717
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
V L +A+R DV SYN +I+ + G Y++L++A
Sbjct: 718 VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
++++ + + + M + PD TY ++N G + + E+ G PD
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETED 298
+ +YN LI VEEA+ +++ M + PD V Y+ +++ L+ E
Sbjct: 838 --------LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 299 -KAIWW 303
+AI W
Sbjct: 890 LEAIKW 895
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/477 (19%), Positives = 192/477 (40%), Gaps = 37/477 (7%)
Query: 45 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
+ EAE M+ G+ E YSS+I + L D A ++ M + +
Sbjct: 261 VEEAEFAFSHMRKFGIVC-ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV 319
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
++ AY ++ ++ A IL +M G SP++ +YN +I+ + + G
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
+ PD +Y S++E EA ++E+ R G P+ L+N G+ A
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
++M G + G ++ + +++ +L+G + +
Sbjct: 440 KTIEDMTGIGCQYSSILGI---------ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTS 490
Query: 285 YST-VISGLKIETEDKAIWWLDEDTY-DSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL- 341
+S+ V++ +K D + L E + DS +S Y S G + A+++
Sbjct: 491 FSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKES----GQLTDAVKIY 546
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL--SMPSYTVYDILLE 399
+H M D ++ ++ S +I+ EA++ L + S G + + V + ++
Sbjct: 547 NHKMESDEEINLHIT-STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVK 605
Query: 400 NCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKNKTDGENKT-------------- 445
S E S++E++ + +D+ D ML + K D ++K
Sbjct: 606 AGSLEEACSVLEIMDE--QKDIVPDVYL-FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHW 662
Query: 446 DGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALISALDDDRMYNEMS 502
+ MYN +I R+ + + + EM+ YG P+ + L+ +++ +++
Sbjct: 663 NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVN 719
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 22/263 (8%)
Query: 36 LKRL--CREGRIPEAEQMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIA 92
LKRL C + A + + M+C G L + YS ++ + D A L+ E+
Sbjct: 146 LKRLESCSD---TNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCG 202
Query: 93 -KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
F S +N++++A ++ +V A M E G+ P+V + ++ +
Sbjct: 203 FHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVE 262
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLME---ALCVEQRLSEAFDLFREMLRGGVSPDELTYT 208
GI ++A YSS++ L + + E DL ++ +
Sbjct: 263 EAEFAFSHMRKFGIVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQ---------DRVRL 312
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALE 268
+L N ++ +++ + E+ + GFSP I+ YN LI G + ++E A
Sbjct: 313 KLENWLVMLNAYSQQGKM--ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 370
Query: 269 ILRGMPEMGLSPDAVCYSTVISG 291
+ + +GL PD Y ++I G
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEG 393
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%)
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
M+ G + Y++++ + +++ ++L M P TYN ++ Y +
Sbjct: 759 MQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGW 818
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
+D+ +L+ + E GL PD+ SYN +I + + I PD TY++
Sbjct: 819 IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTN 878
Query: 175 LMEALCVEQRLSEAFDLFREMLRGGV 200
L+ AL EA M + G+
Sbjct: 879 LVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 152/341 (44%), Gaps = 43/341 (12%)
Query: 22 SDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKID 81
S S +V + + LC+ G+I EA ++ + + + D T++ VI + L +
Sbjct: 39 SSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMR 94
Query: 82 SAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
A L + ++ +VVT+ ++V Y R + A + + M ER +V S+N +I
Sbjct: 95 EARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMI 147
Query: 142 SKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS 201
+ ++ I +++S+++AL R+ EA +LF M R
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPR---- 199
Query: 202 PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLD 261
D +++T +++ G+ +A L D M + I+++NA+I G +
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN------------IISWNAMITGYAQNN 247
Query: 262 RVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYED 320
R++EA ++ + MPE D ++T+I+G E +KA D +++
Sbjct: 248 RIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI------- 296
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
++++++ Y+ + AL + M RDG + V V I
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 137/316 (43%), Gaps = 51/316 (16%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQS--------LKRLCREGRIPEAEQMLEVM 55
NV +N MI G+A + G+ D + E + +K L + GRI EA + E M
Sbjct: 139 NVVSWNTMIDGYAQS-GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
+ D ++++++ K+D A L M + +++++N+++ Y + + +
Sbjct: 198 PRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRI 249
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
D+A + + M ER D S+N +I+ F +K + +++++
Sbjct: 250 DEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI----SWTTM 301
Query: 176 MEALCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACC-----LVGE-----FTKAF 224
+ + EA ++F +MLR G V P+ TY +L+AC + G+ +K+
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 225 HLHDEMIHKGFL-------------PDFVTGF--SPAIVTYNALIHGLCFLDRVEEALEI 269
H +E++ L F G ++++N++I +EA+E+
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 270 LRGMPEMGLSPDAVCY 285
M + G P AV Y
Sbjct: 422 YNQMRKHGFKPSAVTY 437
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 112/280 (40%), Gaps = 43/280 (15%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G++ + ++ MK + L +++S++ + L +D A LL EM G P +V
Sbjct: 136 RNGKLELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIV 191
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN---------------RVISKFC 145
T+NSL+ Y + A+ +L+ M GL P S + + I +
Sbjct: 192 TWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 146 XXXXXXXXXXXXXXXVD----KGIFPDA------------ATYSSLMEALCVEQRLSEAF 189
+D G P A ++SL+ L L +A
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 190 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 249
L M + G+ PD +T+ L + +G+ KA + +M KG P+ +V+
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN--------VVS 363
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI 289
+ A+ G AL++ M E G+ P+A ST++
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 136/367 (37%), Gaps = 64/367 (17%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G +A ++ M+ G + T ++ N + ++ G +V
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
NSL+ Y R ++ + + +M +R LS S+N ++S +
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG-- 218
G+ PD T++SL+ + +A + + M G+ P + + LL A G
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 219 EFTKAFH-----------------LHDEMIHKGFLPDFVTGF----SPAIVTYNALIHGL 257
+ KA H L D I G+LP F + IV +N+L+ GL
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 258 CFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLS 317
+ +++A ++ M + G+ PDA+ ++++ SG
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASG-------------------------- 335
Query: 318 YEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDL 377
Y G ++AL + M G + V+++ + +G K R A +
Sbjct: 336 -----------YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 378 LYIASDG 384
+ + +G
Sbjct: 385 IKMQEEG 391
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 113/284 (39%), Gaps = 41/284 (14%)
Query: 45 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
+ +AE ++ M+ +G+ D T++S+ + L K + A ++ +M KG +P+VV++ +
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYN---------------RVISKFCXXXX 149
+ + + A+ + M E G+ P+ + + + + FC
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 150 XXXXXXXXXXXVD----KGIFPDA------------ATYSSLMEALCVEQRLSEAFDLFR 193
VD G A A+++ ++ + R E F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 194 EMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNAL 253
ML G+ PD +T+T +L+ C G + + D M + G P I + +
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR-------YGIIPTIEHCSCM 539
Query: 254 IHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE 297
+ L ++EA + ++ M L PDA + +S KI +
Sbjct: 540 VDLLGRSGYLDEAWDFIQ---TMSLKPDATIWGAFLSSCKIHRD 580
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 79/194 (40%), Gaps = 6/194 (3%)
Query: 129 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 188
GL D +S V+ K C ++ IFPD L+ C+ ++L EA
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEA 264
Query: 189 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIV 248
L EM RGG Y +L+ C + F L E + K L G
Sbjct: 265 TRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPE-VEKVLLEMEFRGVPRNTE 323
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKAIWWL 304
T+N LI+ LC + R EEA+ + M E G PDA Y +I L +I D+ I +
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKM 383
Query: 305 DEDTYDSLMDSLSY 318
Y L++ Y
Sbjct: 384 KSAGYGELLNKKEY 397
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K+LC +G AE+M++ +F DE +I +C K+D A L EM GF
Sbjct: 218 VKKLCEKGHASIAEKMVKNT-ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGF 276
Query: 96 SPSVVTYNSL---VFAYCRRDSVDK----AVGILRAMAERGLSPDVDSYNRVISKFCXXX 148
YN + V CR+ K +L M RG+ + +++N +I+ C
Sbjct: 277 EIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIR 336
Query: 149 XXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSP--DELT 206
+ G PDA TY L+ +L R+ E ++ +M G ++
Sbjct: 337 RTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKE 396
Query: 207 YTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 266
Y L C + A + M G P I TY+ L+ +C +++ A
Sbjct: 397 YYGFLKILCGIERLEHAMSVFKSMK--------ANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 267 LEILRGMPEMGLSPDAVCYSTVISGLKIETED 298
+ + + G++ Y +K +T++
Sbjct: 449 NGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKE 480
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 13/251 (5%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
E ++L M+ +G+ DE T++ ++ + + S+ LS MI+KG P+ + ++
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 107 FAYCRRDSVDKAVGILRAMAERG--LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKG 164
+ C V KA+ + + M +G L V +++ G
Sbjct: 987 SSLCDNGDVKKALDLWQVMESKGWNLGSSV-VQTKIVETLISKGEIPKAEDFLTRVTRNG 1045
Query: 165 IFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAF 224
+ A Y ++++ L L A L ML+ P +Y ++N + KA
Sbjct: 1046 MM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAM 1103
Query: 225 HLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
H EM+ G SP+I T++ L+H C +V E+ +++ M +G SP
Sbjct: 1104 DFHTEMVE--------LGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEM 1155
Query: 285 YSTVISGLKIE 295
+ TVI ++E
Sbjct: 1156 FKTVIDRFRVE 1166
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L +G IP+AE L + G+ Y ++I + +D A LL+ M+ P
Sbjct: 1025 LISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPG 1082
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+Y+S++ R + +DKA+ M E GLSP + +++ ++ KFC
Sbjct: 1083 SSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIK 1142
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
V G P + ++++ VE+ +A ++ M + G D T+ L++
Sbjct: 1143 SMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLIS 1196
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 18/197 (9%)
Query: 3 LNVNIYNGMIRGFATAAGKSD-----SESKKVGEAF---QSLKRLCREGRIPEAEQMLEV 54
LN +IY+ + G+ D E K + F + L LCR A +E
Sbjct: 289 LNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEE 348
Query: 55 MKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
++ G DE T+ +IGW C I A LSE+++KG+ P V +YN+++ R+
Sbjct: 349 LEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGL 408
Query: 115 VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSS 174
IL M E G+ + ++ +++ +C K I Y
Sbjct: 409 WQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEA---------KRIVNKMFGY-G 458
Query: 175 LMEALCVEQRLSEAFDL 191
L+EA VE LSEAF L
Sbjct: 459 LIEASKVEDPLSEAFSL 475
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 120/316 (37%), Gaps = 27/316 (8%)
Query: 39 LCREGRIPEAEQMLEVMKCKG-LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
L REG + E E +L M+ G ++E + +IG + + A L M KG P
Sbjct: 157 LIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVP 216
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLS---PDVDSYNRVISKFCXXXXXXXXX 154
Y L+ R + A I E ++DS +VI C
Sbjct: 217 LTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEAR 276
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
V G +++ YS + +Q + E+ PD R+L++
Sbjct: 277 VLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV---KYEPDVFVGNRILHSL 333
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C +A+ +E+ H GF D VT+ LI C+ ++ A+ L +
Sbjct: 334 CRRFGSERAYVYMEELEHLGFKQD--------EVTFGILIGWCCYEGDIKRAVLYLSEIM 385
Query: 275 EMGLSPDAVCYSTVISGLKIETEDKAIWW-----LDEDTYDSLMDSLSYEDTYSSVMNDY 329
G PD Y+ ++SGL K +W LDE + +M SLS T+ ++ Y
Sbjct: 386 SKGYKPDVYSYNAILSGLF----RKGLWQHTHCILDEMKENGMMLSLS---TFKIMVTGY 438
Query: 330 LAEGNMQRALQLDHDM 345
+ A ++ + M
Sbjct: 439 CKARQFEEAKRIVNKM 454
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 173/492 (35%), Gaps = 108/492 (21%)
Query: 48 AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
A +++ ++ +G +++ Y+ +I C K +A +L EM+ K PS+ + L+
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 108 AYCRRDSVDKAVGI-----------------------------LRAMAERGLSPDVDSYN 138
CR + A + LR M GLS YN
Sbjct: 783 RLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYN 842
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG 198
+ +C V K I +Y + +C+E + A L +L G
Sbjct: 843 VMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLG 902
Query: 199 GVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLC 258
+P + +L + F HL ++K L G P T+N L+HG
Sbjct: 903 ESNPGGVIIYNML----IFYMFRAKNHLE---VNKVLLEMQGRGVLPDETTFNFLVHGYS 955
Query: 259 FLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSY 318
+L L M G+ P+ V S SL D+
Sbjct: 956 SSADYSSSLRYLSAMISKGMKPNNRSLRAVTS--------------------SLCDN--- 992
Query: 319 EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGY-LSSYVAYSVLINGLHKKARTREAKRDL 377
G++++AL L M G+ L S V + ++ L K +A+ L
Sbjct: 993 --------------GDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFL 1038
Query: 378 LYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDYSMRDLSDDAATAHTTMLHLKN 437
+ +G ++ P+Y ++K S R D A TM LKN
Sbjct: 1039 TRVTRNGMMA-PNYD------------------NIIKKLSDRGNLDIAVHLLNTM--LKN 1077
Query: 438 KT-DGENKTDGGMYNLLIFEHCRSHNVHKAYNMYMEMVHYGHAPHMFSVLALI------- 489
++ G + D + LL R + + KA + + EMV G +P + + L+
Sbjct: 1078 QSIPGSSSYDSVINGLL-----RYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEAC 1132
Query: 490 SALDDDRMYNEM 501
L+ +R+ M
Sbjct: 1133 QVLESERLIKSM 1144
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 163/418 (38%), Gaps = 78/418 (18%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K L G++ +AE L +M GL + Y+ + +C N +L M+ K
Sbjct: 810 IKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNI 869
Query: 96 SPS------------------------------------VVTYNSLVFAYCRRDSVDKAV 119
S V+ YN L+F R + +
Sbjct: 870 ICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVN 929
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
+L M RG+ PD ++N ++ + + KG+ P+ + ++ +L
Sbjct: 930 KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSL 989
Query: 180 CVEQRLSEAFDLFREMLRGGVS-PDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL-P 237
C + +A DL++ M G + + T+++ GE KA + G + P
Sbjct: 990 CDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP 1049
Query: 238 DF---VTGFS---------------------PAIVTYNALIHGLCFLDRVEEALEILRGM 273
++ + S P +Y+++I+GL +++++A++ M
Sbjct: 1050 NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEM 1109
Query: 274 PEMGLSPDAVCYSTVI----SGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDY 329
E+GLSP +S ++ ++ ++ I + L +S S E + +V++ +
Sbjct: 1110 VELGLSPSISTWSGLVHKFCEACQVLESERLI-----KSMVGLGESPSQE-MFKTVIDRF 1163
Query: 330 LAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
E N +A ++ M + GY + + LI+ + + ++E K A +GFLS
Sbjct: 1164 RVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM---SSSKEKKTT---TAGEGFLS 1215
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D SS+I + ++ +A + S++ + +V +N+++ Y D+A+ ++
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLV 206
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
+ M G+ PDV ++N +IS F G PD +++S++ L
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ +AFD F++ML G+ P+ T LL AC T A+ H + IH G+ VTG
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACT-----TLAYMKHGKEIH-GY--SVVTG 318
Query: 243 FSPAIVTYNALI--HGLCFLDRVEEALEILRGMPE 275
+AL+ +G C + EA+ + R P+
Sbjct: 319 LEDHGFVRSALLDMYGKCGF--ISEAMILFRKTPK 351
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 97/234 (41%), Gaps = 22/234 (9%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGIL 122
D ++++I + N ++ D A L+ +M G P V+T+N+L+ + + +K IL
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 123 RAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
M G PDV S+ +IS + G++P++AT +L+ A
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+ ++ + G+ + LL+ G ++A L + K
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK--------- 352
Query: 243 FSPAIVTYNALI-----HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
VT+N++I HGL ++A+E+ M G D + ++ +++
Sbjct: 353 ---TTVTFNSMIFCYANHGL-----ADKAVELFDQMEATGEKLDHLTFTAILTA 398
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%)
Query: 80 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNR 139
+ + +L +M + G P N ++ AY + VD+A+ + + MA G P+ +Y+
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 140 VISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG 199
++ C KG+ P+ + Y L+ +L +E+RL EA ++ +ML
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 200 VSPDELTYTRLLNACCLVGEFTKAFHLHDE 229
+SPD LTY +L C G ++A + +E
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 29/282 (10%)
Query: 58 KGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV-D 116
+G + Y ++I + + TL+ E+IA SV YN ++ C R + +
Sbjct: 102 RGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFN 161
Query: 117 KAVGILRAMAERGLS-PDVDSYNRVISKFCXXXXXXXXXXXXXXXV--------DKGIFP 167
+A + M S PD+++Y ++S V G+ P
Sbjct: 162 RAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIP 221
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D + +++A + EA +F+EM G P+ TY+ L+ C G + +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
EM KG +P+ Y LI L R++EA+E++ M LSPD + Y+T
Sbjct: 282 KEMQVKGMVPNG--------SCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 288 VISGL-----------KIETEDKAIWWLDEDTYDSLMDSLSY 318
V++ L +E K + E Y +LMD + +
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYF 375
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+G+ + TY++L++ L A ++F+EM+ GV PD +TY LL+ C G+ K
Sbjct: 10 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEK 69
Query: 223 AFHLHDEMIHKG---FLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
A L + G F + G P +VTY +I G C EEA + R M E G
Sbjct: 70 A--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL 127
Query: 280 PDAVCYSTVI 289
PD+ Y+T+I
Sbjct: 128 PDSGTYNTLI 137
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++ M +GL + TY+++I D A + EM++ G P ++TYN L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 110 CRRDSVDKAV---------GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
C+ ++KA+ + +++ +G+ P+V +Y +IS FC
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
+ G PD+ TY++L+ A + + + +L +EM + D TY + +
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-------- 173
Query: 221 TKAFHLHDEMIHKGFL 236
LHD + KGFL
Sbjct: 174 ----MLHDGRLDKGFL 185
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 190 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 249
+LFREM + G+ + +TYT L+ G+ A + EM+ G PD I+T
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPD--------IMT 53
Query: 250 YNALIHGLCFLDRVEEAL---------EILRGMPEMGLSPDAVCYSTVISGL-KIETEDK 299
YN L+ GLC ++E+AL ++ + G+ P+ V Y+T+ISG K +++
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 300 AIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSV 359
A + D L TY++++ +L +G+ + +L +M + Y +
Sbjct: 114 AYTLFRKMKEDG---PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL 170
Query: 360 LINGLH 365
+ + LH
Sbjct: 171 VTDMLH 176
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHT---------L 86
++ L + G A+++ + M G+ D TY+ ++ C K++ A L
Sbjct: 23 IQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDL 82
Query: 87 LSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI 141
+ KG P+VVTY +++ +C++ ++A + R M E G PD +YN +I
Sbjct: 83 FCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 122/302 (40%), Gaps = 18/302 (5%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L G+ EAE + K + LD Y+++I K+ A + M G S
Sbjct: 749 LTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCS 808
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+ TYN+++ Y R +DKA+ I GL D Y +I +
Sbjct: 809 IQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFS 868
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFD-LFREMLRGGVSPDELTYTRLLNACCLV 217
KGI P +Y ++M +C RL D L + M R G D TY L+
Sbjct: 869 EMQKKGIKPGTPSY-NMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAES 927
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
+F +A + KG +P + +AL+ +EEA M E G
Sbjct: 928 SQFAEAEKTITLVKEKG-IPLSHSH---FSSLLSALVKA----GMMEEAERTYCKMSEAG 979
Query: 278 LSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYDSLMDSLSYEDTY-SSVMND-YLAEGN 334
+SPD+ C T++ G + +K I + Y+ ++ S +D + SSV+ D Y A G
Sbjct: 980 ISPDSACKRTILKGYMTCGDAEKGILF-----YEKMIRSSVEDDRFVSSVVEDLYKAVGK 1034
Query: 335 MQ 336
Q
Sbjct: 1035 EQ 1036
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 18/300 (6%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMA 126
Y+ V+ + + KI A EM+ G P V +++ Y R + +A+
Sbjct: 191 YTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQ 250
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
ER + YN ++S V++G+ P+ TY+ ++ + +
Sbjct: 251 ERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKE 310
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
EA F EM G P+E+TY+ +++ G++ KA L+++M +G +P T +
Sbjct: 311 EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML 370
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+ Y + +AL + M + D VI GL I K + D
Sbjct: 371 SLYYKT--------ENYPKALSLFADMERNKIPADE-----VIRGLIIRIYGKLGLFHDA 417
Query: 307 DTY---DSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDM-SRDGYLSSYVAYSVLIN 362
+ ++ L+ E TY ++ +L GN+ +AL + M +RD LS + AY V++
Sbjct: 418 QSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRF-AYIVMLQ 476
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 8/196 (4%)
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
+ PSVV Y ++ Y + + A M E G PD + ++ +
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAML 243
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
++ I + Y+ ++ +L + + DL+ EM+ GV P+E TYT ++++
Sbjct: 244 TFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSY 303
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G +A EM GF+P+ VTY+++I E+A+ + M
Sbjct: 304 AKQGFKEEALKAFGEMKSLGFVPEE--------VTYSSVISLSVKAGDWEKAIGLYEDMR 355
Query: 275 EMGLSPDAVCYSTVIS 290
G+ P +T++S
Sbjct: 356 SQGIVPSNYTCATMLS 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 140/364 (38%), Gaps = 55/364 (15%)
Query: 35 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSV------------------------ 70
+++ C+EG + EA+ ++ M + D R ++
Sbjct: 543 AMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDV 602
Query: 71 --IGWFCNLN----KIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA 124
+G NL ++ +L+ M S V N ++ ++ R V KA I
Sbjct: 603 MALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADI 660
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQR 184
+ GL + ++ +I+ + + P + S+++A
Sbjct: 661 IIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRCGW 719
Query: 185 LSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
L +A+ LF E G P +T + L+NA G+ +A H+ + K D
Sbjct: 720 LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELD------ 773
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS----GLKIETEDKA 300
V YN LI + +++ A EI M G+ Y+T+IS GL++ DKA
Sbjct: 774 --TVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL---DKA 828
Query: 301 IWWLDEDTYDSLMDSLSY--EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYS 358
I + + + S Y E Y++++ Y G M AL L +M + G +Y+
Sbjct: 829 I-----EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN 883
Query: 359 VLIN 362
+++
Sbjct: 884 MMVK 887
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 19/236 (8%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEM--IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
T +++I C+ + A ++ + G SV Y SL+F + + +V +A +++
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSV--YRSLLFGWSVQRNVKEARRVIQ 232
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD-------KGIFPDAATYSSLM 176
M G++PD+ +N +++ C ++ I P + +Y+ L+
Sbjct: 233 DMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILL 292
Query: 177 EALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFL 236
L +R+ E+ + +M R G PD +Y ++ L G F K + DEMI +GF
Sbjct: 293 SCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFR 352
Query: 237 PDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
P+ F Y LI LC ++RV AL++ M + Y +I L
Sbjct: 353 PE--RKF------YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 104/266 (39%), Gaps = 8/266 (3%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
GRI A ++L M G + ++++ ++ + D H + G
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
N L+ C +++ A+ +L ++ P+V +++ +I FC
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+ I PD T++ L+ L + R+ E DL M G P+ TY +L +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A + +MI G P F ++Y ++ GLC V E +LR M G P
Sbjct: 326 AKEMMSQMISWGMRPSF--------LSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Query: 283 VCYSTVISGLKIETEDKAIWWLDEDT 308
+ + V+ + + D + LD T
Sbjct: 378 LMWWKVVQCVVSKNNDDSQANLDRIT 403
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 106/272 (38%), Gaps = 53/272 (19%)
Query: 162 DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFT 221
D G +P + +++ ++ L + E +F + GV D L+ C G
Sbjct: 160 DFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLE 219
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
A L DE + P+ +T FSP LI G C + EEA ++L M + + PD
Sbjct: 220 AALQLLDEFPQQKSRPNVMT-FSP-------LIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQL 341
+ ++ +ISGL+ +G ++ + L
Sbjct: 272 TITFNILISGLR-------------------------------------KKGRVEEGIDL 294
Query: 342 DHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY-DILLEN 400
M G + Y ++ GL K R EAK + + S G PS+ Y ++L
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGM--RPSFLSYKKMVLGL 352
Query: 401 CSNSEFKSLVELVKDYSMRDLSDDAATAHTTM 432
C E KS+VE+ D+ +R + + T M
Sbjct: 353 C---ETKSVVEM--DWVLRQMVNHGFVPKTLM 379
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCRE-------------------GR 44
NV ++ +IRGF K EAF+ L+R+ +E GR
Sbjct: 236 NVMTFSPLIRGFCNKG--------KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 45 IPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNS 104
+ E +LE MK KG + TY V+ + + A ++S+MI+ G PS ++Y
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 105 LVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
+V C SV + +LR M G P + +V+
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 123/318 (38%), Gaps = 24/318 (7%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLL-------SEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
++ S+ C + K S L E+ K F V +N L+ A+C + +A
Sbjct: 138 SFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFG--VDEFNILLRAFCTEREMKEA 195
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
I + R +PDV + N ++ F V +G P++ TY ++
Sbjct: 196 RSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDG 254
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
C ++ EA LF +M R T L++ + KA L DE+ +G PD
Sbjct: 255 FCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPD 314
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE- 297
YNAL+ L V A+++++ M E G+ PD+V + ++ G+ E
Sbjct: 315 --------CGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEF 366
Query: 298 --DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYV 355
+ + + SL+ T +M + G + L L M GY
Sbjct: 367 GFNGVCEYYQKMKERSLVPKTP---TIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 423
Query: 356 AYSVLINGLHKKARTREA 373
A +L L + R +A
Sbjct: 424 ALELLTTALCARRRANDA 441
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 145/355 (40%), Gaps = 46/355 (12%)
Query: 34 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
++++RL + E++LE E + +I + + ++A + EM +
Sbjct: 76 RTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER 135
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
+ +++N+L+ A D GI + + + LS
Sbjct: 136 NCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK-LS---------------------- 172
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
I PD A+Y++L++ LC + +EA L E+ G+ PD +T+ LL+
Sbjct: 173 -----------IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE 221
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
G+F + + M+ K D I +YNA + GL ++ EE + + +
Sbjct: 222 SYTKGKFEEGEQIWARMVEKNVKRD--------IRSYNARLLGLAMENKSEEMVSLFDKL 273
Query: 274 PEMGLSPDAVCYSTVISGLKIETE-DKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE 332
L PD ++ +I G E + D+AI W E + L + ++S++
Sbjct: 274 KGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR-PLKF--VFNSLLPAICKA 330
Query: 333 GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
G+++ A +L ++ L +++ L K ++ EA+ + ++ +L
Sbjct: 331 GDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYLQ 385
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 19/313 (6%)
Query: 3 LNVNIYNGMIRGFATA----------AGKSDSESKKVGEAFQSLKRLCREGRIP-EAEQM 51
L+ N YN +I+ A A +S K + + +L L +P +A ++
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 52 LEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
E M+ LD TY +I ++D+A L +M + PS ++SLV + +
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+D ++ + M G P + +I + G P+
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
Y+ ++E+ +L A +F++M + G P TY+ LL G+ A +++ M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+ G P + +Y +L+ L V+ A +IL M MG S D ++
Sbjct: 481 N--------AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIY 532
Query: 292 LKIETEDKAIWWL 304
+K + D A+ WL
Sbjct: 533 IKDASVDLALKWL 545
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 135 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFRE 194
++YN+VI + G D TY++LM + +AF+++
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 195 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 254
M + D TY ++ + G AF L +M + P F +++L+
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSV--------FSSLV 355
Query: 255 HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVI-SGLKIETEDKAIWWLDEDTYDSLM 313
+ R++ ++++ M G P A + ++I S K D A+ DE
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 314 DSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLI 361
+ Y+ ++ + G ++ A+ + DM + G+L + YS L+
Sbjct: 416 PNFGL---YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLL 460
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 128/311 (41%), Gaps = 63/311 (20%)
Query: 166 FPDAATY------SSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
PD +T +S++ L +L LF +M R G+ PD +TY LL C V
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN 216
Query: 220 -FTKAFHLHDEMIHKGFLPDF---------------------------VTGFSPAIVTYN 251
+ KA L E+ H G D V G SP I Y+
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 252 ALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG-LKIETEDKAIWWLDEDTYD 310
+L++ + ++A E++ M +GL P+ V +T++ +K D++ L E
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE---- 332
Query: 311 SLMDSLSY---EDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKK 367
++S Y E Y +M+ G ++ A + DM G S A S++I+ L +
Sbjct: 333 --LESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRS 390
Query: 368 ARTREAKRDLLYIASDGFLSMPSYTVY---DILLEN------CSNSEFKSLVELVKDYSM 418
R +EAK LS S T Y D+++ N C E +S++ ++K
Sbjct: 391 KRFKEAKE----------LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDE 440
Query: 419 RDLSDDAATAH 429
+ +S D T H
Sbjct: 441 QAVSPDYNTFH 451
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 117/300 (39%), Gaps = 19/300 (6%)
Query: 68 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR-RDSVDKAVGILRAMA 126
+S++ K+DS L +M G P VVTYN+L+ + ++ KA+ ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 127 ERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLS 186
G+ D Y V++ +G P+ YSSL+ + +
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 187 EAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
+A +L EM G+ P+++ T LL G F ++ L E+ G++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES--------AGYAEN 341
Query: 247 IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE 306
+ Y L+ GL ++EEA I M G+ D S +IS L K L
Sbjct: 342 EMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR 401
Query: 307 DTYDSLMDSLSYEDTYSSVMND----YLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLIN 362
D+ +YE ++N Y G M+ +++ M Y + +LI
Sbjct: 402 DS------ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 100/245 (40%), Gaps = 10/245 (4%)
Query: 46 PEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSL 105
P+A +++ + G+ +D Y +V+ + + + A + +M +G SP++ Y+SL
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 106 VFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 165
+ +Y + KA ++ M GL P+ ++ + G
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
+ Y LM+ L +L EA +F +M GV D + +++A C F +A
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 226 LHDEMIHKGFLPDFVTGFSPA-IVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVC 284
L D T + +V N ++ C +E + +++ M E +SPD
Sbjct: 399 LSR---------DSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
Query: 285 YSTVI 289
+ +I
Sbjct: 450 FHILI 454
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
GR EAE ++ MK +G + YSS++ + A L++EM + G P+ V
Sbjct: 251 GRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM 310
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
+L+ Y + D++ +L + G + + Y ++
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG 370
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
KG+ D S ++ ALC +R EA +L R+ D + +L A C GE
Sbjct: 371 KGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMES 430
Query: 223 AFHLHDEMIHKGFLPDFVT 241
+ +M + PD+ T
Sbjct: 431 VMRMMKKMDEQAVSPDYNT 449
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L + G++ EA + + MK KG+ D S +I C + A L +
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCD 411
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+V N+++ AYCR ++ + +++ M E+ +SPD ++++ +I F
Sbjct: 412 LVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTL 471
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 197
KG + SSL+ L + +EAF ++ MLR
Sbjct: 472 DMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVY-NMLR 509
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 38 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
R R+ ++ E E LE++K G+ LD TYS++I N + A M G P
Sbjct: 197 RFGRQFQLIE-EMALEMVK-DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMP 254
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
VTY++++ Y + V++ + + G PD +++ + F
Sbjct: 255 DEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVL 314
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ P+ Y++L+EA+ + A LF EML G++P+E T T L+
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKA 374
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPE-M 276
A L +EM K + DF + YN L++ + EEA + M E +
Sbjct: 375 RWARDALQLWEEMKAKKWPMDF--------ILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 277 GLSPDAVCYSTVIS 290
PD Y+ +++
Sbjct: 427 QCRPDNFSYTAMLN 440
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 7/233 (3%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
+A + E M GL DE TYS+++ + K++ +L +A G+ P + ++ L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF 166
+ D +L+ M + P+V YN ++ ++ G+
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
P+ T ++L++ + +A L+ EM D + Y LLN C +G +A L
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
++M P +Y A+++ + E+A+E+ M + G+
Sbjct: 419 FNDMKES-------VQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 110/271 (40%), Gaps = 63/271 (23%)
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V G+ D TYS+++ ++A + F M + G+ PDE+TY+ +L+ G+
Sbjct: 213 VKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFS----------------------------PAIVTYNA 252
+ L++ + G+ PD + FS P +V YN
Sbjct: 273 EEVLSLYERAVATGWKPDAI-AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 253 LIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS----------GLKIETEDKAIW 302
L+ + + A + M E GL+P+ + ++ L++ E KA
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 303 W-LDEDTYDSLMD---SLSYED--------------------TYSSVMNDYLAEGNMQRA 338
W +D Y++L++ + E+ +Y++++N Y + G ++A
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 339 LQLDHDMSRDGYLSSYVAYSVLINGLHKKAR 369
++L +M + G + + + L+ L K R
Sbjct: 452 MELFEEMLKAGVQVNVMGCTCLVQCLGKAKR 482
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 3/196 (1%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
+ G++ E + E G D +S + F D +L EM + P+VV
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
YN+L+ A R A + M E GL+P+ + ++ +
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 161 VDKGIFPDAATYSSLMEALCVEQRL-SEAFDLFREMLRG-GVSPDELTYTRLLNACCLVG 218
K D Y++L+ +C + L EA LF +M PD +YT +LN G
Sbjct: 388 KAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGG 446
Query: 219 EFTKAFHLHDEMIHKG 234
+ KA L +EM+ G
Sbjct: 447 KAEKAMELFEEMLKAG 462
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 136/372 (36%), Gaps = 75/372 (20%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+K L + G EA + MK +GL +D+ + SV+ L I+ + + +I F
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 96 S-------------------------------PSVVTYNSLVFAYCRRDSVDKAVGILRA 124
+VV++ ++V Y + ++AV I
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 125 MAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIF------------------ 166
M G+ PD + + IS + G+
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 167 -------------PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
DA ++++++ A R E LF +M++ G+ PD +T T +++A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
C G K M + G P+I Y+ +I R+EEA+ + GM
Sbjct: 482 CSRAGLVEKGQRYFKLMTSE-------YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 274 PEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
P PDA+ ++T++S + + + W E + +D + Y+ + + Y ++G
Sbjct: 535 P---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE--LDP-HHPAGYTLLSSIYASKG 588
Query: 334 NMQRALQLDHDM 345
QL M
Sbjct: 589 KWDSVAQLRRGM 600
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX-XXX 159
T+ L+ A CR VD A ++R M++ + D Y+R++S C
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 160 XVDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ K F P Y+ +M L R E + +M V PD + YT +L
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
++ KA L DE++ G PD + TYN I+GLC + +E AL+++ M ++G
Sbjct: 301 DYPKADKLFDELLLLGLAPD--------VYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352
Query: 279 SPDAVCYSTVISGL 292
P+ V Y+ +I L
Sbjct: 353 EPNVVTYNILIKAL 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G+ + +T+ L++ALC + A +L R M + V D Y+RLL++ C + +
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSC 232
Query: 224 FHLHDEMIHKGFLPDF-VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
F + G+L D T FSP + Y ++ L R +E + +L M + PD
Sbjct: 233 FDV------IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDL 286
Query: 283 VCYSTVISGLKIETED--KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQ 340
VCY+ V+ G+ I ED KA DE L + TY+ +N + +++ AL+
Sbjct: 287 VCYTIVLQGV-IADEDYPKADKLFDELLLLGLAPDVY---TYNVYINGLCKQNDIEGALK 342
Query: 341 LDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
+ M++ G + V Y++LI L K AK
Sbjct: 343 MMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAK 376
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 101/260 (38%), Gaps = 17/260 (6%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTL---LSEMIAKGF 95
LCR G + A +++ M + +D R YS ++ C +K S + L ++ F
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLEDLRKTRF 247
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
SP + Y ++ + V +L M + PD+ Y V+
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADK 307
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
+ G+ PD TY+ + LC + + A + M + G P+ +TY L+ A
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEAL-------- 267
G+ ++A L EM G + T F I Y + +C +EEA
Sbjct: 368 KAGDLSRAKTLWKEMETNGVNRNSHT-FDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKS 426
Query: 268 ----EILRGMPEMGLSPDAV 283
E++ + E GL AV
Sbjct: 427 SRIEEVISRLCEKGLMDQAV 446
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 13/258 (5%)
Query: 35 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 94
+++RL + R + E ++E K +E YS++I + + + A +M G
Sbjct: 73 TVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYG 132
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER--GLSPDVDSYNRVISKFCXXXXXXX 152
S V++N+L+ A + DK + + +R + PD SY +I +C
Sbjct: 133 TPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEK 192
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYT-RLL 211
KG+ +++++ +L + L A +L+ EM++ G D Y R++
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
+A E K L +EM G PD ++YN L+ C ++EA ++
Sbjct: 253 SAQKESPERVK--ELIEEMSSMGLKPD--------TISYNYLMTAYCERGMLDEAKKVYE 302
Query: 272 GMPEMGLSPDAVCYSTVI 289
G+ +P+A + T+I
Sbjct: 303 GLEGNNCAPNAATFRTLI 320
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
YS+L+ + + A F +M + G +++ LLNAC F K L DE
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDE-- 162
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+P P ++Y LI C E+A+EI+R M G+ + ++T++S
Sbjct: 163 ----IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 292 L--KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
L K E E W + +D+ +Y S + + +R +L +MS G
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKE-----SPERVKELIEEMSSMG 273
Query: 350 YLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILL 398
++Y+ L+ ++ EAK+ +Y +G P+ + L+
Sbjct: 274 LKPDTISYNYLMTAYCERGMLDEAKK--VYEGLEGNNCAPNAATFRTLI 320
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P ++Y L+ +YC + +KA+ I+R M +G+ ++ ++S
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVE--QRLSEAFDLFREMLRGGVSPDELTYTRLLNAC 214
V KG D A Y+ + + E +R+ E L EM G+ PD ++Y L+ A
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAY 288
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
C G +A + +++G + +P T+ LI LC+ E+ I +
Sbjct: 289 CERGMLDEA-----KKVYEGLEGN---NCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
Query: 275 EMGLSPDAVCYSTVISGL 292
M PD ++ GL
Sbjct: 341 YMHKIPDFNTLKHLVVGL 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
Query: 60 LFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAV 119
+ D+ +Y +I +C+ + A ++ +M KG + + + +++ + ++ ++ A
Sbjct: 170 IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229
Query: 120 GILRAMAERGLSPDVDSYN-RVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
+ M ++G D +YN R++S G+ PD +Y+ LM A
Sbjct: 230 NLWNEMVKKGCELDNAAYNVRIMS--AQKESPERVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
C L EA ++ + +P+ T+ L+ C + + + + + ++ +PD
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
Query: 239 FVT 241
F T
Sbjct: 348 FNT 350
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 58/331 (17%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKV----------GEAFQSLKRLCREGRIPEAEQMLE 53
++ I+N M RG++ + S V F SL + C + E + L
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 54 VMKCKGLFLDERTY--SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCR 111
+ K L LD+ Y ++I + +DSA + ++ P VV YN+++ Y R
Sbjct: 153 CLSMK-LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV----EPCVVCYNAMITGYAR 207
Query: 112 RDSVDKAVGILRAMAERGLSPDVDSYNRVISK---------------------FCXXXXX 150
R+ ++A+ + R M + L P+ + V+S FC
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 151 XXXXXX----------XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV 200
+K + D +S+++ A + ++ +F M V
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 201 SPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFL 260
PDE+T+ LLNAC G + +M+ K G P+I Y +++ L
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK-------FGIVPSIKHYGSMVDLLSRA 380
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
+E+A E + +P +SP + + +++
Sbjct: 381 GNLEDAYEFIDKLP---ISPTPMLWRILLAA 408
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 101/280 (36%), Gaps = 53/280 (18%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
PD ++S+ E F LF E+L G+ PD T+ LL AC + + L
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 227 HDEMIHKGF------LPDFVTGFS-----------------PAIVTYNALIHGLCFLDRV 263
H + G P + ++ P +V YNA+I G +R
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 264 EEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDE----------------- 306
EAL + R M L P+ + +V+S + W+ +
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 307 ----------DTYDSLMDSLSYEDT--YSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSY 354
D S+ + + Y+DT +S+++ Y G ++++ + M +
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331
Query: 355 VAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVY 394
+ + L+N R E ++ + S F +PS Y
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSK-FGIVPSIKHY 370
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 37 KRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 96
+ L GR EAE++ + M+ G D TYS ++ C +++ A +L +M A+G
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
P + T+ L+ +C+ + +DKA+ M E+G D + + +I F
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIF 497
Query: 157 XXXXV-DKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM 195
V + + P +TY L++ L ++ EA DL + M
Sbjct: 498 LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 84/204 (41%), Gaps = 2/204 (0%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G L + Y + ++ + D A + M G+ P +TY+ LVF C+ +++A
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
G+L M +G PD+ ++ +I C ++KG D+ L++
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG 484
Query: 179 LCVEQRLSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLP 237
+ + A EM++ V P + TY L++ + + +A L +M+ K P
Sbjct: 485 FVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYP 543
Query: 238 DFVTGFSPAIVTYNALIHGLCFLD 261
+ F + + L FLD
Sbjct: 544 AYAEAFDGYLAKFGTLEDAKKFLD 567
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 134/362 (37%), Gaps = 76/362 (20%)
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
+ S VTYN+ + R +SV + ++ M G D+D+Y +V +F
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 155 XXXXXXVDKGIFPDAATYSSLMEALC--VEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
+D P S L+ L L F + R+ G S + Y +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
+ VG F +A + M + G+ PD +TY+ L+ GLC R+EEA +L
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPD--------NITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 273 MPEMGLSPDAVCYSTVISGLKIETE-DKAI----------WWLDEDTYDSLMDSL----- 316
M G PD ++ +I G E DKA+ + +D + D L+D
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 317 ------------------SYEDTYSSVMNDYLAEGNMQRALQLDHDMSR----------D 348
++ TY +++ L + AL L M + D
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFD 550
Query: 349 GYLS---------------------SYVAYSVLINGLHKKARTREAKRDLLYIASDGFLS 387
GYL+ S+ AY +I +++ R +AK +LL+I F +
Sbjct: 551 GYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAK-NLLFICPHHFKT 609
Query: 388 MP 389
P
Sbjct: 610 HP 611
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 82 SAHTLLSEMIAKGFSPSVVTY-------NSLVFAYCRRDSVDKAVGILRAMAERGLSPDV 134
+A + +++ +G P+ ++Y N L+ A +R V +L M ++GL P
Sbjct: 399 AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQR 458
Query: 135 DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFRE 194
+N V+ VD G P +Y +L+ AL + EAF ++
Sbjct: 459 RHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNH 518
Query: 195 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 254
M++ G+ P+ YT + A L G+ + F+L D ++ + G P++VT+NA+I
Sbjct: 519 MIKVGIEPNLYAYTTM--ASVLTGQ--QKFNLLDTLLKEM----ASKGIEPSVVTFNAVI 570
Query: 255 HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
G A E M + P+ + Y +I L
Sbjct: 571 SGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 50 QMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAY 109
++L M+ KGL R +++V+ ++ +A + M+ G P+V++Y +L+ A
Sbjct: 444 RLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL 503
Query: 110 CRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDA 169
+ D+A + M + G+ P++ +Y + S KGI P
Sbjct: 504 EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSV 563
Query: 170 ATYSSLMEALCVEQRLSE-AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD 228
T+++++ C LS A++ F M V P+E+TY L+ A + A+ LH
Sbjct: 564 VTFNAVISG-CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHV 622
Query: 229 EMIHKGF 235
+ ++G
Sbjct: 623 KAQNEGL 629
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 33 FQSLKRLCREGRIPE-AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
F ++ R+ +P+ A + E M G D T +++I + +D A +L
Sbjct: 213 FTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRAR 272
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
+ + VT+++L+ Y + D + I M G+ P++ YNR+I
Sbjct: 273 TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPW 332
Query: 152 XXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLL 211
+ G P+ +TY++L+ A + +A ++REM G+S + Y LL
Sbjct: 333 QAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL 392
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
+ C +AF + +M + P T+++LI RV EA L
Sbjct: 393 SMCADNRYVDEAFEIFQDMKN-------CETCDPDSWTFSSLITVYACSGRVSEAEAALL 445
Query: 272 GMPEMGLSPDAVCYSTVI 289
M E G P ++VI
Sbjct: 446 QMREAGFEPTLFVLTSVI 463
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDK-AVGILRAM 125
Y+ + F ++ + L EM+ +G P T+ +++ + R++ V K AV M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII-SCARQNGVPKRAVEWFEKM 236
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+ G PD + +I + + DA T+S+L+ V
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT-GFS 244
+++ EM GV P+ + Y RL+++ +G + + ++I+K D +T GF+
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDS---MGRAKRPWQA--KIIYK----DLITNGFT 347
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
P TY AL+ ++AL I R M E GLS + Y+T++S
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 53 EVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRR 112
E MK G+ + Y+ +I + A + ++I GF+P+ TY +LV AY R
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 113 DSVDKAVGILRAMAERGLSPDVDSYNRVIS-----KFCXXXXXXXXXXXXXXXVDKGIFP 167
D A+ I R M E+GLS V YN ++S ++ D P
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD----P 419
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D+ T+SSL+ R+SEA +M G P T ++ +
Sbjct: 420 DSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTF 479
Query: 228 DEMIHKGFLPD 238
D+++ G PD
Sbjct: 480 DQVLELGITPD 490
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 11/243 (4%)
Query: 41 REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVV 100
R G + A + + + + +D T+S++I + D + EM A G P++V
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLV 316
Query: 101 TYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXX 160
YN L+ + R +A I + + G +P+ +Y ++ +
Sbjct: 317 IYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREM 376
Query: 161 VDKGIFPDAATYSSLMEALCVEQR-LSEAFDLFREMLR-GGVSPDELTYTRLLNACCLVG 218
+KG+ Y++L+ ++C + R + EAF++F++M PD T++ L+ G
Sbjct: 377 KEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
++A L GF P + ++I +V++ + + E+G+
Sbjct: 436 RVSEA--------EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGI 487
Query: 279 SPD 281
+PD
Sbjct: 488 TPD 490
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 166/372 (44%), Gaps = 39/372 (10%)
Query: 38 RLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
RLC + +P A + ++ ++ GL+ D TYS +I + + + + + G P
Sbjct: 35 RLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ N L+ Y + + ++ A + M +R +V S+ +IS +
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELL 150
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+ + P+ TYSS++ + +S+ L +++ G+ D + L++ +
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
GE A + DEM VTG + + +N++I G R + ALE+ + M G
Sbjct: 208 GEPEDALSVFDEM---------VTGDA---IVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 278 LSPDAVCYSTVI---SGLK-IETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEG 333
+ ++V+ +GL +E +A + + D +++ +++++ Y G
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--------NALVDMYCKCG 307
Query: 334 NMQRALQLDHDMS-RDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYT 392
+++ AL++ + M RD + +S +I+GL + ++EA + + S G + P+Y
Sbjct: 308 SLEDALRVFNQMKERD-----VITWSTMISGLAQNGYSQEALKLFERMKSSG--TKPNYI 360
Query: 393 VYDILLENCSNS 404
+L CS++
Sbjct: 361 TIVGVLFACSHA 372
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNAC-----CLVG 218
GI DA +++ +++ C L A+ REM + G++PD +TYT L++A C++G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
L + M+ KG P+ + T+N I L R +A ++L MP++ +
Sbjct: 232 N-----GLWNLMVLKGCKPN--------LTTFNVRIQFLVNRRRAWDANDLLLLMPKLQV 278
Query: 279 SPDAVCYSTVISGLKIET-EDKAIWWLDEDTYDSLMDSLSYEDT---YSSVMNDYLAEGN 334
PD++ Y+ VI G + D A E Y + M Y+ Y ++++ GN
Sbjct: 279 EPDSITYNMVIKGFFLARFPDMA-----ERVYTA-MHGKGYKPNLKIYQTMIHYLCKAGN 332
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAK 374
A + D R + + +L+ GL KK + +AK
Sbjct: 333 FDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAK 372
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
G+ +D +++ I FC L +D A+ + EM G +P VVTY +L+ A + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 119 VGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEA 178
G+ M +G P++ ++N I + PD+ TY+ +++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 179 LCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD 238
+ + A ++ M G P+ Y +++ C G F A+ + + + K + P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 239 FVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
+ T L+ GL ++++A I+
Sbjct: 352 --------LDTVEMLLKGLVKKGQLDQAKSIM 375
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 35 SLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG 94
++K C G + A + M+ GL D TY+++I + + L + M+ KG
Sbjct: 183 AIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKG 242
Query: 95 FSPSVVTYN-SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXX 153
P++ T+N + F RR + D A +L M + + PD +YN VI F
Sbjct: 243 CKPNLTTFNVRIQFLVNRRRAWD-ANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 154 XXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNA 213
KG P+ Y +++ LC A+ + ++ +R P+ T LL
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 214 CCLVGEFTKAFHLHDEMIHKGFLP 237
G+ +A + E++H+ P
Sbjct: 362 LVKKGQLDQAKSIM-ELVHRRVPP 384
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 70 VIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER- 128
+I F +ID +L EM P V+TYNS++ R V++ +G+L M E
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDC 242
Query: 129 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 188
+S ++ +YN V++ V GI PD +Y++++++L + E+
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 189 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
LF EM + + P Y L++ G+F A L DE+
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 9/185 (4%)
Query: 74 FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPD 133
F N + +LL E+ ++ N ++FA+ +DK + IL+ M E PD
Sbjct: 152 FINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPD 211
Query: 134 VDSYNRVISKFCXX-XXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLF 192
V +YN V+ D + + TY++++ + R ++
Sbjct: 212 VITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIY 271
Query: 193 REMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNA 252
EM++ G+ PD L+YT ++++ G ++ L DEM + P++ Y A
Sbjct: 272 NEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR--------QIRPSVYVYRA 323
Query: 253 LIHGL 257
LI L
Sbjct: 324 LIDCL 328
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 33/259 (12%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
P+ Y++L + + +L+ MLR VSP TY+ L+ A F ++
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQA 893
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYS 286
H + F GF I T LI R+ EA ++ MPE D + ++
Sbjct: 894 H--------IWKFGFGFHVKIQT--TLIDFYSATGRIREARKVFDEMPER----DDIAWT 939
Query: 287 TVISGLKIETEDKAIWWLDEDTYDSLMDSLS--YEDTYSSVMNDYLAEGNMQRALQLDHD 344
T++S + LD D+ +SL + +S E T + ++N Y+ GN+++A L +
Sbjct: 940 TMVSAYR--------RVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQ 991
Query: 345 MSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNS 404
M + ++++ +I G + R REA + +G + P ++ C++
Sbjct: 992 MP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII--PDEVTMSTVISACAH- 1044
Query: 405 EFKSLVELVKDYSMRDLSD 423
++E+ K+ M L +
Sbjct: 1045 --LGVLEIGKEVHMYTLQN 1061
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/391 (18%), Positives = 150/391 (38%), Gaps = 83/391 (21%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK---RLCREGRIPEAEQMLEVMKCK-- 58
NV +YN + +GF T + +SL+ R+ R+ P + ++K
Sbjct: 835 NVFVYNALFKGFVTCS-----------HPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 59 ---------------GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYN 103
G + +++I ++ +I A + EM + + +
Sbjct: 884 ASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWT 939
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDK 163
++V AY R +D A + M+E+ + + N +I+ + ++
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEKNEA----TSNCLINGY----MGLGNLEQAESLFNQ 991
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
D +++++++ +R EA +F +M+ G+ PDE+T + +++AC +G
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 224 FHLHDEMIHKGFLPDFVTGFS-----------------------PAIVTYNALIHGLCFL 260
+H + GF+ D G + + +N++I GL
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 261 DRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMDSLSYED 320
+EAL++ M + P+AV + +V + T+ L+D
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTAC---------------THAGLVD--EGRR 1154
Query: 321 TYSSVMNDYLAEGNMQRALQLDHDMSRDGYL 351
Y S+++DY N++ + H S+ G +
Sbjct: 1155 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 141/364 (38%), Gaps = 44/364 (12%)
Query: 85 TLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKF 144
TL + + G + T N+L+ Y +D A+ + +R DV +YN +I
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGL 193
Query: 145 CXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDE 204
D D +++SL+ EA LF EM+ G+ PD
Sbjct: 194 VKAREIVRAREL----FDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 205 LTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPD--FVTGF------------------- 243
+ L+AC G++ K +HD K D TG
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 244 --SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK---IETED 298
+ T+NA+I GL E ++ R M G+ PD V + +V+ G + E
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEA 369
Query: 299 KAIWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAE-GNMQRALQLDHDMSRD-GYLSSYVA 356
+ ++ D SL D ++ E + M D L G ++ A ++ M +D G +A
Sbjct: 370 RNLF----DQMRSLYD-VNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 357 YSVLINGLHKKARTREAKRDLLYIASDGFLSMPSYTVYDILLENCSNSEFKSLVELVKDY 416
+S L+ G A++ + + LS VY +++E +N+E V V++
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKA---LSPEDGGVYKVMVEMYANAERWEEVVKVREI 481
Query: 417 SMRD 420
RD
Sbjct: 482 IDRD 485
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 103/266 (38%), Gaps = 45/266 (16%)
Query: 63 DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKG---FSPSVVTYNSLVFAYCRRDS----- 114
+E Y+S+I +F K+ A + M+ P++ TY+ L A R +
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 115 ---VDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX-XXXXXXXXXVDKGIFPDAA 170
++ + R M + G+ PDV + N ++ + V P++
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 171 TYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEM 230
TY L+ LC + R A +L EM G P+ +Y L+NA L GE A EM
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 231 IHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS 290
I G + DF ++Y L+ C + +EA +L + E L
Sbjct: 386 IENGRVVDF--------ISYRTLVDESCRKGKYDEATRLLEMLREKQL------------ 425
Query: 291 GLKIETEDKAIWWLDEDTYDSLMDSL 316
+D D+YD L++ L
Sbjct: 426 -------------VDRDSYDKLVNVL 438
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 191 LFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHD--EMIHKGFLPDFVTGFSPAIV 248
LFR+M+ G+ PD LN CLV + + H++D + H+ V P
Sbjct: 275 LFRQMVDSGIEPDVFA----LN--CLVKGYVLSLHVNDALRIFHQM---SVVYDCEPNSF 325
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI--ETED--KAIWWL 304
TY+ LIHGLC R A E+L M G P+ Y+++++ + E +D K +W +
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 305 DEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGL 364
E+ ++D +SY +++++ +G A +L +M R+ L +Y L+N L
Sbjct: 386 IEN--GRVVDFISYR----TLVDESCRKGKYDEATRL-LEMLREKQLVDRDSYDKLVNVL 438
Query: 365 HK 366
HK
Sbjct: 439 HK 440
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LC +GR A ++L MK KG + ++Y+S++ F +ID A L EMI G
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVIS 142
++Y +LV CR+ D+A +L + E+ L D DSY+++++
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVN 436
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 145/374 (38%), Gaps = 51/374 (13%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLD 63
NV ++N MI+ ++ VG +SL MK +G++ D
Sbjct: 66 NVLVFNAMIKCYSL-----------VGPPLESL-------------SFFSSMKSRGIWAD 101
Query: 64 ERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILR 123
E TY+ ++ +L+ + + E+I GF +V Y + A +
Sbjct: 102 EYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFD 161
Query: 124 AMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
M+ER +V +N +I FC ++ I +++S++ +L
Sbjct: 162 EMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCG 213
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGF 243
R EA +LF EM+ G PDE T +L +G +H G DF+T
Sbjct: 214 RDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT-- 271
Query: 244 SPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWW 303
NAL+ C +E A I R M + V ++T+ISG + + +
Sbjct: 272 -----VGNALVDFYCKSGDLEAATAIFRKMQRR----NVVSWNTLISGSAVNGKGE---- 318
Query: 304 LDEDTYDSLMDS---LSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVA-YSV 359
D +D++++ E T+ V+ G ++R +L M L + Y
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 360 LINGLHKKARTREA 373
+++ + + R EA
Sbjct: 379 MVDLMSRSGRITEA 392
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 119/314 (37%), Gaps = 59/314 (18%)
Query: 39 LC-REGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
LC R + E E++ VMK G E TYS ++ F + + A + EM+ S
Sbjct: 223 LCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISL 282
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+++ A + + D A+ I ++M ++G+ P++ + N +I+
Sbjct: 283 REDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVY 342
Query: 158 XXXVDKGIFPDAATYSSLMEAL----------------------CVEQRL---------- 185
G PD T+++L+ AL C+ + L
Sbjct: 343 SVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQK 402
Query: 186 ----SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+A L EM G++ +Y +++AC + A +++ M + P+ T
Sbjct: 403 LGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFT 462
Query: 242 GFS----------------------PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
S P + YNA IHG+C + A E+ M EMGL
Sbjct: 463 YLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLE 522
Query: 280 PDAVCYSTVISGLK 293
PD + ++ LK
Sbjct: 523 PDGKTRAMMLQNLK 536
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 64/303 (21%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSV 99
C+E + A++ + MK K D R++++++ F L +++A + +M + +
Sbjct: 282 CKESGL--AKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR----DL 331
Query: 100 VTYNSLVFAYCRRDS--------------VDKA-------VGILRAMAERG--------- 129
V++NSL+F Y ++ V+K V ++ A G
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 130 -------LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVE 182
L D + +I +C +K D A ++S++ L
Sbjct: 392 GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK----DVALWTSMITGLAFH 447
Query: 183 QRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG 242
+A LF M GV+P+ +T +L AC G + H+ + M K G
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK-------FG 500
Query: 243 FSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVIS----GLKIETED 298
F P Y +L+ LC RVEEA +I++ +M + P + +++S G IET +
Sbjct: 501 FDPETEHYGSLVDLLCRAGRVEEAKDIVQ--KKMPMRPSQSMWGSILSACRGGEDIETAE 558
Query: 299 KAI 301
A+
Sbjct: 559 LAL 561
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 138/348 (39%), Gaps = 63/348 (18%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLK---RLCREGRIPEAEQMLEVMKCKGL 60
+V+ +N MI G+A K G + ++LK ++ +G P+ +L ++ C G
Sbjct: 196 DVSSFNVMIVGYA-----------KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 61 FLDERTYSSVIGWFCNLNKIDSAHTLLSE-------------MIAKGF----SPSVVTYN 103
D R V GW + S++ +LS + + F + ++N
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVI---SKFCXXXXXXXXXXXXXXX 160
++V + R ++ A + M +R D+ S+N ++ SK
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 161 VDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEF 220
V+K + PD T SL+ LS + ++R + D + L++ C G
Sbjct: 361 VEK-VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 221 TKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSP 280
+AF + F T + + ++I GL F ++AL++ M E G++P
Sbjct: 420 ERAFMV------------FKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 281 DAVCYSTVIS----------GLKIETEDKAIWWLDEDT--YDSLMDSL 316
+ V V++ GL + K + D +T Y SL+D L
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLL 515
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 32 AFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMI 91
+F L+R R G +P + L L D W S +++EM
Sbjct: 119 SFAILQRTLRSGCLPNPQTHL-------LLSD--------AWLERRRGSQSVADIINEMK 163
Query: 92 AKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXX 151
G+SP T N LV + C D +D+A+ ++ M+ G PDV+SY VI+ C
Sbjct: 164 LIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTT 223
Query: 152 XXXXXXXXXVDK-GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDEL-TYTR 209
V K GI P + + AL + + +A ++ E + P E +Y
Sbjct: 224 DVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMI-EFVESRDYPVEFESYEV 282
Query: 210 LLNACCLVGEFTKAFHLHDEMIHKGFLP 237
++ C V E+ A + M +GF+P
Sbjct: 283 VVEGCLEVREYILAGKVVMRMTDRGFIP 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAF-DLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
G P+ T+ L +A +R S++ D+ EM G SPD T L+++ C V + +
Sbjct: 130 GCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDE 189
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM-PEMGLSPD 281
A + +EM G +PD + +Y A+I+ LC + + ++I++ M + G+SP
Sbjct: 190 AIKVVEEMSAAGCIPD--------VESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPR 241
Query: 282 AVCYSTVISGLKIETEDKAIW 302
+ V + L+ ++ IW
Sbjct: 242 KGMLTKVAAALR---ANREIW 259
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 24/276 (8%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
T++S+I + LNK + A LL EM+ GF P+ +T S++ R ++ +
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
R D Y + + D D TY+SL++ +
Sbjct: 408 LRRKCFKD---YTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKG---FLP-DFVT 241
A LF+EM R G+ PD +T +L+AC H +++H+G F+
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACS-----------HSKLVHEGERLFMKMQCEY 513
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAI 301
G P + ++ ++ + +A +I+ MP P ++T+++ I +
Sbjct: 514 GIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP---YKPSGATWATLLNACHIHGNTQIG 570
Query: 302 WWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQR 337
W E + ++ Y Y + N Y A G+ +
Sbjct: 571 KWAAEKLLEMKPENPGY---YVLIANMYAAAGSWSK 603
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 95 FSPS--VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
F P VVT N+L+ Y + D + A + M ER DV S+N ++S +
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER----DVISWNSLLSGYARLGQMKK 193
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
+DK I A S C EA D FREM G+ PDE++ +L
Sbjct: 194 AKGLFHLMLDKTIVSWTAMISGYTGIGC----YVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 213 ACCLVG--EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
+C +G E K HL+ E +GFL TG NALI + +A+++
Sbjct: 250 SCAQLGSLELGKWIHLYAE--RRGFLKQ--TGVC------NALIEMYSKCGVISQAIQLF 299
Query: 271 RGMPEMGLSPDAVCYSTVISG 291
M D + +ST+ISG
Sbjct: 300 GQME----GKDVISWSTMISG 316
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 99/246 (40%), Gaps = 19/246 (7%)
Query: 53 EVMKCKGLF---LDER--TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
++ K KGLF LD+ +++++I + + A EM G P ++ S++
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 108 AYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFP 167
+ + S++ I RG N +I + K
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK---- 305
Query: 168 DAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH 227
D ++S+++ A + F EM R V P+ +T+ LL+AC VG + +
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 228 DEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYST 287
D M D+ P I Y LI L ++E A+EI + MP + PD+ + +
Sbjct: 366 DMMRQ-----DY--QIEPKIEHYGCLIDVLARAGKLERAVEITKTMP---MKPDSKIWGS 415
Query: 288 VISGLK 293
++S +
Sbjct: 416 LLSSCR 421
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 16/214 (7%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP------SVVTYNSLVFAYCRRDSVDKAV 119
Y+ V+ K D A L + + K +P ++ T+N +V YC ++A+
Sbjct: 312 AYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 120 GILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEAL 179
+ R M + SPD S+N ++++ C +K + PD TY LM+
Sbjct: 371 EVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTC 430
Query: 180 CVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDF 239
E ++ E ++ M+ + P+ Y RL + G+ A D M+ K + D
Sbjct: 431 FKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDD- 489
Query: 240 VTGFSPAIVTYNALIHGLCFLDRVEEALEILRGM 273
Y ++ L R++E L+I+ M
Sbjct: 490 --------EAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 20/237 (8%)
Query: 95 FSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXX 154
+PS+ T+ LV D+++KA+ I MA +G D Y+ ++
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 155 XXXXXXVDK--GIFPDAATYSSLMEALCVEQRLSEAFDLFREML--RGGVSPDELTYTRL 210
+K G D Y LM+ +++ EA + + E + V + Y +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 211 LNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEIL 270
L A G+F +A L D + + P + + + T+N +++G C + EEA+E+
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHL---AVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 271 RGMPEMGLSPDAVCYSTVISGL----------KI--ETEDKAIWWLDEDTYDSLMDS 315
R M + SPD + ++ +++ L K+ E E+K + DE TY LMD+
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP-DEYTYGLLMDT 429
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAE-----RGLSPDVDSYNRVISKFCXXXXXXX 152
S + YN ++ A D+A+ + A+ + R L+ ++ ++N +++ +C
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
D PD ++++LM LC + L+EA L+ EM V PDE TY L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEA 266
C G+ + + M+ + P + YN L L ++++A
Sbjct: 429 TCFKEGKIDEGAAYYKTMVE--------SNLRPNLAVYNRLQDQLIKAGKLDDA 474
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/335 (18%), Positives = 134/335 (40%), Gaps = 45/335 (13%)
Query: 47 EAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLV 106
EA ++ M+ +G+ + T++ +I ++D A + +M + G P+++++ +++
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 107 FAYCRRDSVDKAVGILRAMAERGLSPDVDSYN---------------RVI---------- 141
+ ++A+ LR M E GL P+ S R I
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 142 SKFCXXXXXXXXXXXXXXXVDKG-------IFPDAATYSSLMEALCVEQRLSEAFDLFRE 194
S ++K ++ + ++++ A + L EA L+R
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 195 MLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALI 254
+ G+ PD +T T +L+AC G+ +A + +++ K P + Y ++
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK-------RSMKPCLEHYGLMV 691
Query: 255 HGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETEDKAIWWLDEDTYDSLMD 314
L E+AL ++ MP PDA ++++ + + + + +L +S +
Sbjct: 692 DLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPE 748
Query: 315 SLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDG 349
+ Y ++ N Y EG+ +++ M G
Sbjct: 749 N---SGNYVTISNAYAVEGSWDEVVKMREMMKAKG 780
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G + E +Q + G+ LD +S++ ++C + I+ A + M F VVT+
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTW 343
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
N ++ Y ++ V+ A+ + + M L D + ++S +
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR 403
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
D S++M+ + +A +F V D + + LL A G +
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDST----VEKDLILWNTLLAAYAESGLSGE 459
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
A L F + G P ++T+N +I L +V+EA ++ M G+ P+
Sbjct: 460 ALRL--------FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL 511
Query: 283 VCYSTVISGL 292
+ ++T+++G+
Sbjct: 512 ISWTTMMNGM 521
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 14/224 (6%)
Query: 34 QSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK 93
+ ++ LC+E + EA+ + +K + + DE TY ++I FC++ + A L + M+ +
Sbjct: 186 RGVETLCKEKLVEEAKFVFIKLK-EFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDE 244
Query: 94 GFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYNRVISKFCXXXXXXX 152
GF + ++ +++ D+A + M ++RG D Y +I C
Sbjct: 245 GFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDM 304
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++G++ D T++SL+ L V++R+ EA+ L + G +PD Y L+
Sbjct: 305 ARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGL----VEGVENPDISIYHGLIK 360
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHG 256
+ ++A + +MI + G P + TY L+ G
Sbjct: 361 GLVKIKRASEATEVFRKMIQR--------GCEPIMHTYLMLLQG 396
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%)
Query: 56 KCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSV 115
+ KG D TY++++ F +I S +++ M KG VTY SL+ V
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 116 DKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSL 175
D A+ + M + G P V SY + + + P+ TY+ L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 176 MEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
ME L + EA D+F +M GV PD+ L+ GE
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGE 277
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 106/251 (42%), Gaps = 9/251 (3%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS-PS 98
C+ GR + ++ M G+ TY+++I + + ++L++MI G S P
Sbjct: 226 CKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD 285
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V T NS++ +Y ++ K G+ PD+ ++N +I F
Sbjct: 286 VCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMD 345
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
+ TY+ ++E R+ + D+FR+M GV P+ +TY L+NA G
Sbjct: 346 FMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Query: 219 EFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGL 278
K + ++++ + D T F +N +I+ + E+ M E
Sbjct: 406 LVVKIDSVLRQIVNSDVVLD--TPF------FNCIINAYGQAGDLATMKELYIQMEERKC 457
Query: 279 SPDAVCYSTVI 289
PD + ++T+I
Sbjct: 458 KPDKITFATMI 468
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 109/290 (37%), Gaps = 30/290 (10%)
Query: 32 AFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDE-RTYSSVIGWFCNLNKIDSAHTLLSEM 90
++L +E R A ++ +++ + + +TY+ + N + D A L M
Sbjct: 111 VLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVM 170
Query: 91 IAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE-RGLSPDVDSYNRVISKFCXXXX 149
+++G P++ Y SL+ Y + + +DKA L M PDV ++ +IS C
Sbjct: 171 LSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR 230
Query: 150 XXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVS-PDELTYT 208
G+ TY+++++ E + +M+ G S PD T
Sbjct: 231 FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLN 290
Query: 209 RLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT--------------------------- 241
++ + K + G PD T
Sbjct: 291 SIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR 350
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
FS VTYN +I R+E+ ++ R M G+ P+++ Y ++++
Sbjct: 351 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNA 400
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 40 CREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLL--SEMIAKGFSP 97
CR G + EA+ M+ K L T++++I L + DS+ LL ++GF P
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLI----TWNTLIS---ELERSDSSEALLMFQRFESQGFVP 311
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ T+ SLV A +++ + + RG + +V+ N +I +
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
VD+ + +++S+M +EA +LF +M+ G+ PD + + +L+AC
Sbjct: 372 GEIVDR---RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 218 GEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
G K + M + G +P YN ++ L ++ EA E++ MP
Sbjct: 429 GLVEKGLKYFNVM-------ESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP--- 478
Query: 278 LSPDAVCYSTVISGLKIETEDKAI 301
PD + ++ K + I
Sbjct: 479 FKPDESTWGAILGACKAHKHNGLI 502
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 188 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAI 247
A M G+ P L YT L++ + GE KA + EM KG LP+ +
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPN--------V 759
Query: 248 VTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLK 293
TYN++I GLC EA +L+ M G +P+ V YST++ L+
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLR 805
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 78 NKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSY 137
NK +A T L+ M G PSV+ Y +L+ Y +DKA + R M +G P+V +Y
Sbjct: 703 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 138 NRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLR 197
N +I C +G P+ YS+L+ L +LSEA + +EM++
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 198 GG 199
G
Sbjct: 823 KG 824
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
GI P Y++L++ V L +A ++FREM G P+ TY ++ C+ GEF +A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMG 277
L EM +G P+F V Y+ L+ L ++ EA ++++ M + G
Sbjct: 779 CWLLKEMESRGCNPNF--------VVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
LCREGR+ EA + + M+ + + T++++I + N++D A L M K +
Sbjct: 182 LCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNNRVDVARKLFEVMPEK----T 233
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
V++ S++ Y ++ A M + P V + N +I F
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMP---MKP-VIACNAMIVGFGEVGEISKARRVFD 289
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG 218
D+ D AT+ +++A + EA DLF +M + GV P + +L+ C +
Sbjct: 290 LMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 219 EFTKAFHLHDEMIHKGFLPD-----------------------FVTGFSPAIVTYNALIH 255
+H ++ F D F S I+ +N++I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 256 GLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
G EEAL+I MP G P+ V +++
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 103/262 (39%), Gaps = 25/262 (9%)
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
S + +TY SL+ YC+ +KA G+L M E ++P SYN +++ +
Sbjct: 120 SKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 179
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGG-VSPDELTYTRLLNAC 214
+ + PD+ TY+ M AL +S + EM R G V+PD TY+ + +
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 215 CLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMP 274
G KA E+ K DF Y LI L ++ E I R +
Sbjct: 240 VDAGLSQKAEKALQELEMKNTQRDF--------TAYQFLITLYGRLGKLTEVYRIWRSLR 291
Query: 275 EMGLSPDAVCYSTVISGL-------KIETEDKAIWWLDEDTYDSLMDSLSYEDTYSSVMN 327
V Y +I L ET K W + TYD + ++ ++
Sbjct: 292 LAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKE-WQANCSTYDIRIVNV--------LIG 342
Query: 328 DYLAEGNMQRALQLDHDMSRDG 349
Y EG +Q+A +L R G
Sbjct: 343 AYAQEGLIQKANELKEKAPRRG 364
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
L R+ +I EA +++E M+ K + +D Y+ + C +++SA ++ ++ G SP
Sbjct: 152 LTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPD 211
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXX 158
+Y++LV CR V+ A+ ILR M E G++ ++ VI+
Sbjct: 212 SRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVM 271
Query: 159 XXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREM-LRGGVSPDEL 205
K + D+ ++ L L +R EA + +EM +RG DEL
Sbjct: 272 AYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGDEL 319
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK--GFSPSVVTYNSLVFAYCRRDSVD 116
G F + Y +I C L +ID A ++ +M G +PS TY+ ++ + R+ ++
Sbjct: 102 GGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPS--TYHPILCSLTRKYKIE 159
Query: 117 KAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLM 176
+A ++ +M + +S DV +YN ++ C + G PD+ +Y +L+
Sbjct: 160 EAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALV 219
Query: 177 EALCVEQRLSEAFDLFREMLRGGVS 201
C ++ A + R M GV+
Sbjct: 220 LGACRAGKVEAAMAILRRMEEDGVT 244
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 164 GIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKA 223
G+ P +TY ++ +L + ++ EA+ + M VS D Y L + C GE A
Sbjct: 139 GLTP--STYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESA 196
Query: 224 FHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ ++ G PD +Y+AL+ G C +VE A+ ILR M E G++ V
Sbjct: 197 SEVMRKIEEDGNSPD--------SRSYDALVLGACRAGKVEAAMAILRRMEEDGVT---V 245
Query: 284 CYST---VISGL 292
YST VI+GL
Sbjct: 246 LYSTHAHVITGL 257
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 154/382 (40%), Gaps = 59/382 (15%)
Query: 4 NVNIYNGMIRGFATAAGKSDSESKKVGEAFQSLKRLCREGRI--PEAEQMLEVMKCKGLF 61
N+ ++N +IR F+T A SK G Q LK I P + M+C +
Sbjct: 81 NLFVFNLLIRCFSTGA----EPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC--VL 134
Query: 62 LDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGI 121
+ E+T+S ++ + GF V NSLV Y + A I
Sbjct: 135 VGEQTHSQIVRF--------------------GFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 122 LRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCV 181
M R DV S+ +++ +C + +F T+S ++
Sbjct: 175 FGQMGFR----DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF----TWSIMINGYAK 226
Query: 182 EQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVT 241
+A DLF M R GV +E ++++C +G ++ ++ + +
Sbjct: 227 NNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLIL 286
Query: 242 GFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKIETE-DKA 300
G AL+ +E+A+ + G+PE D++ +S++I GL + KA
Sbjct: 287 G--------TALVDMFWRCGDIEKAIHVFEGLPE----TDSLSWSSIIKGLAVHGHAHKA 334
Query: 301 IWWLDEDTYDSLMDSLSY---EDTYSSVMNDYLAEGNMQRALQLDHDMSRD-GYLSSYVA 356
+ Y S M SL + + T+++V++ G +++ L++ +M +D G
Sbjct: 335 M------HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 357 YSVLINGLHKKARTREAKRDLL 378
Y +++ L + + EA+ +L
Sbjct: 389 YGCIVDMLGRAGKLAEAENFIL 410
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 35/286 (12%)
Query: 41 REGRIPEAEQMLEVMK----CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFS 96
R GR A +LE MK C+ D TYS +I F + D LLS+M +G
Sbjct: 197 RSGRFDAAFTLLERMKSSHNCQP---DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIR 253
Query: 97 PSVVTYNSLVFAYCR-RDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
P+ +TYN+L+ AY + + V+ +++ + E PD + N + F
Sbjct: 254 PNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMEN 313
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACC 215
GI P+ T++ L+++ + + M + S +TY +++A
Sbjct: 314 CYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFG 373
Query: 216 LVGEFTKAFHLHDEMIHKGFLPDFVT------GFSPA---------------------IV 248
G+ + +L M + P VT + A +V
Sbjct: 374 RAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLV 433
Query: 249 TYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGLKI 294
+N L+ +++ E +L M + G PD + Y T++ +I
Sbjct: 434 FFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRI 479
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 46 PE-AEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAK-GFSPSVVTYN 103
PE A ++ + M +G ++ Y++++ + + D+A TLL M + P V TY+
Sbjct: 166 PEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYS 225
Query: 104 SLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXV-D 162
L+ ++ + + DK +L M +G+ P+ +YN +I + + +
Sbjct: 226 ILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGE 285
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
PD+ T +S + A ++ + + + G+ P+ T+ LL++ G + K
Sbjct: 286 DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345
Query: 223 AFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDA 282
+ + M +S IVTYN +I +++ + R M + P
Sbjct: 346 MSAVMEYMQK--------YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSC 397
Query: 283 VCYSTVI 289
V +++
Sbjct: 398 VTLCSLV 404
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 86/228 (37%), Gaps = 10/228 (4%)
Query: 67 YSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM- 125
Y +I + + AH L EMI +G + Y +LV AY R D A +L M
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+ PDV +Y+ +I F +GI P+ TY++L++A +
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 186 SEAFDLFREML-RGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFS 244
E +ML PD T L A G+ EM+ + +G
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI--------EMMENCYEKFQSSGIE 324
Query: 245 PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
P I T+N L+ ++ ++ M + S V Y+ VI
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 41/234 (17%)
Query: 167 PDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHL 226
P+ Y L+ L ++ +A +LF+EM+ G + YT L++A G F AF L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 227 HDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYS 286
+ M P + TY+ LI + ++ ++L M G+ P+ + Y+
Sbjct: 208 LERMKSSH-------NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYN 260
Query: 287 TVI-----SGLKIETEDKAIWWLDED-------TYDSLMDSLS-----------YED--- 320
T+I + + +E E I L ED T +S + + YE
Sbjct: 261 TLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQS 320
Query: 321 --------TYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHK 366
T++ +++ Y GN ++ + M + Y + V Y+V+I+ +
Sbjct: 321 SGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 29 VGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 88
+ A L LC++G + EA ++ +M+ KG + Y++V+ FC +KI+ A +
Sbjct: 131 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 190
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
+M G +P+ +Y LV + +D AV M E G SP+V ++ ++ C
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
I + M E GL P+ + ++ C DKG P+ Y++++EA C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
++ +A +FR+M G++P+ +Y L+ A EM+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE-------- 229
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+G SP + T+ L+ LC + VE+A + + + G +
Sbjct: 230 SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 190 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 249
++F++M GG+ P+ + +L+ C G +A L M KG +P+ +V
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPE--------VVI 168
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
Y A++ C ++E+A I R M G++P+A Y ++ GL
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 211
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ +I +A+++ M+ G+ + +Y ++ N N +D A SEM+ G SP+
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISK 143
V T+ LV A CR V++A + + ++G + +V + + K
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 29 VGEAFQSLKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLS 88
+ A L LC++G + EA ++ +M+ KG + Y++V+ FC +KI+ A +
Sbjct: 131 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 190
Query: 89 EMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFC 145
+M G +P+ +Y LV + +D AV M E G SP+V ++ ++ C
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 121 ILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALC 180
I + M E GL P+ + ++ C DKG P+ Y++++EA C
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 181 VEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFV 240
++ +A +FR+M G++P+ +Y L+ A EM+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE-------- 229
Query: 241 TGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+G SP + T+ L+ LC + VE+A + + + G +
Sbjct: 230 SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 190 DLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVT 249
++F++M GG+ P+ + +L+ C G +A L M KG +P+ +V
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPE--------VVI 168
Query: 250 YNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
Y A++ C ++E+A I R M G++P+A Y ++ GL
Sbjct: 169 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGL 211
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPS 98
C+ +I +A+++ M+ G+ + +Y ++ N N +D A SEM+ G SP+
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 99 VVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISK 143
V T+ LV A CR V++A + + ++G + +V + + K
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 80 IDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM-AERGLSPDVDSYN 138
+D+A L + + P+V T N+++ A R +++ + + + + P+V SYN
Sbjct: 161 LDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYN 220
Query: 139 RVISKFCXXXXXXXXXXXXXXXVDKGIF-PDAATYSSLMEALCVEQRLSEAFDLFREMLR 197
++I+ C + F P + TY L + L R+ +A L REML
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLS 280
Query: 198 GGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHK 233
G + D Y L+ +G+F KA DE+ K
Sbjct: 281 KGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 21/252 (8%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G++ A+ + + MK L L ++++I + A + EMI K P ++
Sbjct: 271 GQVATAKILFDKMKSPNLIL----WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
S + A + S+++A + + DV + +I F +D
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTK 222
+ D +S+++ + R EA L+R M RGGV P+++T+ LL AC G +
Sbjct: 387 R----DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 223 AFHLHDEMI-HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+ + M HK +P Y +I L +++A E+++ MP + P
Sbjct: 443 GWWFFNRMADHK---------INPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPG 490
Query: 282 AVCYSTVISGLK 293
+ ++S K
Sbjct: 491 VTVWGALLSACK 502
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
Query: 68 SSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAE 127
+++IG + ++ A + EM P++V +N+++ A R + V A I M
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 128 RGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSE 187
R + S+N +++ + + D ++S+++ + +E
Sbjct: 201 RNHT----SWNVMLAGYIKAGELESAKRIFSEMPHR----DDVSWSTMIVGIAHNGSFNE 252
Query: 188 AFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGF---------LPD 238
+F FRE+ R G+SP+E++ T +L+AC G F LH + G+ L D
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALID 312
Query: 239 FVT--GFSP-------------AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAV 283
+ G P IV++ ++I GL + EEA+ + M G++PD +
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 284 CYSTVI-----SGLKIETED 298
+ +++ +GL E ED
Sbjct: 373 SFISLLHACSHAGLIEEGED 392
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 31/256 (12%)
Query: 42 EGRIPEAEQMLEVMKCKGLFLDERTYSSVI-----GWFCNLNKIDSAHTLLSEMIAKGFS 96
G EA +M+ M G+ LDE TY SVI L K A+ L E + F
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 97 PSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXX 156
NSLV Y + D+A RA+ E+ + D+ S+N ++S +
Sbjct: 324 ------NSLVSLYYKCGKFDEA----RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 157 XXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCL 216
+K I S L E E E LF M R G P + ++ + +C +
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGE----EGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 217 VGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEM 276
+G + H +++ GF G NALI VEEA ++ R MP +
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAG--------NALITMYAKCGVVEEARQVFRTMPCL 481
Query: 277 GLSPDAVCYSTVISGL 292
D+V ++ +I+ L
Sbjct: 482 ----DSVSWNALIAAL 493
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 100/262 (38%), Gaps = 61/262 (23%)
Query: 39 LCREGRIPEAEQMLEVMKCKGLFLDERTYS------SVIGWFCNLNKIDSAHTLLSEMIA 92
L G E ++ MK +G + +S +V+G +CN ++++
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN------GQQYHAQLLK 445
Query: 93 KGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXX 152
GF S+ N+L+ Y + V++A + R M P +DS
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTM------PCLDS---------------- 483
Query: 153 XXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLN 212
++++L+ AL +EA D++ EML+ G+ PD +T +L
Sbjct: 484 -----------------VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 213 ACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRG 272
AC G + D M + V P Y LI LC + +A ++
Sbjct: 527 ACSHAGLVDQGRKYFDSM-------ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 273 MPEMGLSPDAVCYSTVISGLKI 294
+P P A + ++SG ++
Sbjct: 580 LP---FKPTAEIWEALLSGCRV 598
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 156/394 (39%), Gaps = 41/394 (10%)
Query: 36 LKRLCREGRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGF 95
+ L + G + + + M G+ +D T+S V F +L + L ++ GF
Sbjct: 167 MNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF 226
Query: 96 SPSVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXX 155
NSLV Y + VD A + M ER DV S+N +I+ +
Sbjct: 227 GERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAEKGLS 282
Query: 156 XXXXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGV----SPDELTYTRLL 211
+ GI D AT S+ A C + RL L R + GV S ++ LL
Sbjct: 283 VFVQMLVSGIEIDLATIVSVF-AGCADSRL---ISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 212 NACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILR 271
+ G+ A + EM + ++V+Y ++I G EA+++
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDR------------SVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 272 GMPEMGLSPDAVCYSTVI---SGLKIETEDKAIW-WLDEDTYDSLMDSLSYEDTYSSVMN 327
M E G+SPD + V+ + ++ E K + W+ E + L ++ S+ +
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE-------NDLGFDIFVSNALM 439
Query: 328 DYLAE-GNMQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREAKRDLLYIASDGFL 386
D A+ G+MQ A + +M + ++++ +I G K EA + +
Sbjct: 440 DMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 387 SMPSYTVYDILLENCSNSEFKSLVELVKDYSMRD 420
S TV +L S S F E + Y MR+
Sbjct: 496 SPDERTVACVLPACASLSAFDKGRE-IHGYIMRN 528
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 102/260 (39%), Gaps = 23/260 (8%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWF---CNLNKIDSAHTLLSEMIAKGFSPSV 99
G + EAE + M+ K + +++++IG + C N+ S LL E K FSP
Sbjct: 446 GSMQEAELVFSEMRVKDII----SWNTIIGGYSKNCYANEALSLFNLLLE--EKRFSPDE 499
Query: 100 VTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXX 159
T ++ A + DK I + G D N ++ +
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 160 XVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
K D +++ ++ + EA LF +M + G+ DE+++ LL AC G
Sbjct: 560 IASK----DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
+ + + M H+ P + Y ++ L R + ++ R + M +
Sbjct: 616 VDEGWRFFNIMRHE-------CKIEPTVEHYACIVD---MLARTGDLIKAYRFIENMPIP 665
Query: 280 PDAVCYSTVISGLKIETEDK 299
PDA + ++ G +I + K
Sbjct: 666 PDATIWGALLCGCRIHHDVK 685
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 100/265 (37%), Gaps = 47/265 (17%)
Query: 70 VIGWFCNLNKIDSAHTL--LSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRA--- 124
VI N+N D +TL M + + +YN L+ C VD A I +
Sbjct: 304 VINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKR 363
Query: 125 MAERGL-SPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQ 183
M GL D +Y +I F G+ P+ T+SSL+ A
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 184 RLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLH--------------DE 229
+ +A LF EML G P+ + LL+AC ++ +AF L D+
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADD 483
Query: 230 MIHKGFL--PDFVTG-----------------------FSPAIVTYNALIHGLCFLDRVE 264
++ KG P+ + F P TYN L+ C D
Sbjct: 484 IVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYY- 541
Query: 265 EALEILRGMPEMGLSPDAVCYSTVI 289
E++ M +GLSP+ + +ST+I
Sbjct: 542 RGKELMDEMKSLGLSPNQITWSTLI 566
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 42/263 (15%)
Query: 61 FLDERTYSSVIGW------FCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDS 114
DE ++ +V W F + SA +L EM+A G P+ T++S+V +
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 115 VDKAVGILRAMAERGLSPDV---DSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+ + ++ + G + S + + SK C D +
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSK-CGQFKEACELFSSLQNAD------TIS 192
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVG-EFTKAFHLHDEM 230
++ ++ +L ++ EA + EM++ GV P+E T+ +LL A +G EF K +H +
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKT--IHSNI 250
Query: 231 IHKGF---------LPDFVTGFSPA--------------IVTYNALIHGLCFLDRVEEAL 267
I +G L DF + FS + + +++ G R +EA+
Sbjct: 251 IVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAV 310
Query: 268 EILRGMPEMGLSPDAVCYSTVIS 290
M +GL P+ YS ++S
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILS 333
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 121/314 (38%), Gaps = 38/314 (12%)
Query: 69 SVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAMAER 128
S++ + ++ A + E + S++ +N L+ YCR + A + R+M ER
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 129 GLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRLSEA 188
+ S++ +I + +K + ++++L+ A
Sbjct: 226 ----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV----VSWTTLINGFSQTGDYETA 277
Query: 189 FDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTG------ 242
+ EML G+ P+E T +L+AC G +H ++ G D G
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDM 337
Query: 243 -------------FS----PAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
FS I+++ A+I G R +A++ R M G PD V +
Sbjct: 338 YAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF 397
Query: 286 STVISGLKIETEDKAIWWLDEDTYDSLMDSLSYEDT---YSSVMNDYLAEGNMQRALQLD 342
V++ +E L + +DS+ + E T Y V++ G + A +L
Sbjct: 398 LAVLTACLNSSEVD----LGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Query: 343 HDMSRDGYLSSYVA 356
+M + L+++ A
Sbjct: 454 ENMPINPDLTTWAA 467
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 119/302 (39%), Gaps = 41/302 (13%)
Query: 7 IYNGMIRGF--------ATAAGKSDSESKKVGEAFQSLKRLCREGRIPEAEQMLEVMKCK 58
I+N +I G+ AT +S E + G +K G + A+Q+ E+M K
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPE-RNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 59 GLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKA 118
+ +++++I F ++A + EM+ KG P+ T +++ A + ++
Sbjct: 257 NVV----SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Query: 119 VGILRAMAERGLSPD-------VDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAAT 171
+ I + + G+ D VD Y + C D +
Sbjct: 313 IRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK-----------DILS 361
Query: 172 YSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMI 231
++++++ V R +A FR+M+ G PDE+ + +L AC E + D M
Sbjct: 362 WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM- 420
Query: 232 HKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISG 291
P + Y ++ L ++ EA E++ MP ++PD ++ +
Sbjct: 421 ------RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAALYRA 471
Query: 292 LK 293
K
Sbjct: 472 CK 473
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 21/254 (8%)
Query: 53 EVMKCKGLFL-----DERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVF 107
+V + GLF D T++ +I A +LLS+M+ G P TY+ L+
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 108 AYCRRDSVDKAVGILRAMAERG--LSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGI 165
+ ++D+ I +A+ PD+ N ++S + V K
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK-- 532
Query: 166 FPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFH 225
D +++S++ L +A +LF+EML G P+ +T+ +L+AC G T+
Sbjct: 533 --DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 590
Query: 226 LHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCY 285
L M P I Y ++I L +++EA E + +P +PD Y
Sbjct: 591 LFKAMKE-------TYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP---FTPDHTVY 640
Query: 286 STVISGLKIETEDK 299
++ + DK
Sbjct: 641 GALLGLCGLNWRDK 654
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 59/297 (19%)
Query: 111 RRDSVDKAVGILRAMAERGLS---------PDVDSYNRVISKFCXXXXXXXXXXXXXXXV 161
RR ++ ILR ++E GL P S NRV+ V
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARV 98
Query: 162 DKGIFPDA--ATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLVGE 219
+ P+ T ++++ +R++EA+ LFREM + VS +T +L A C G
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS-----WTVMLTALCDDGR 153
Query: 220 FTKAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLS 279
A L DEM + +V++N L+ GL +E+A ++ MP S
Sbjct: 154 SEDAVELFDEMPERN------------VVSWNTLVTGLIRNGDMEKAKQVFDAMP----S 197
Query: 280 PDAVCYSTVISGLKIETEDKAIWWLDEDTYDS---LMDSLSYED--TYSSVMNDYLAEGN 334
D V ++ +I G +++ D + L +S ++ T++S++ Y G+
Sbjct: 198 RDVVSWNAMIKG-----------YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGD 246
Query: 335 MQRALQLDHDMSRDGYLSSYVAYSVLINGLHKKARTREA-------KRDLLYIASDG 384
++ A +L +M + V+++ +I+G REA K+D+ ++ +G
Sbjct: 247 VREAYRLFCEMPE----RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNG 299
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Query: 39 LCREGRIPEAEQMLEVMK-CKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSP 97
LC G I A +++E M KG+ + T+ S+IG + +L M +
Sbjct: 220 LCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVML 279
Query: 98 SVVTYNSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXX 157
+ +Y L+ + V++A ++ M ++ L + YN +++ +
Sbjct: 280 DLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELY 339
Query: 158 XXXVDKGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRGGVSPDELTYTRLLNACCLV 217
+G+ P+ TY LM LC ++ EA E+ DE Y+ L C V
Sbjct: 340 SEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRV 399
Query: 218 GEFTKAFHLHDEMIHKGFLP 237
G K+ + EMI GF+P
Sbjct: 400 GMIDKSLEVVAEMIRDGFIP 419
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 22/193 (11%)
Query: 188 AFDLFREMLRGGVSPDEL-TYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSPA 246
A D F M+ G+ + + T ++ C GE T+A L +EM V G
Sbjct: 193 ARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEM-------GLVKGVKAN 245
Query: 247 IVTYNALIHGLCFLDR--VEEALEILRGMPEMGLSPDAVCYSTVISGL----KIETEDKA 300
IVT+ ++I C + R EE +L+ M + + D Y +I G K+E ++
Sbjct: 246 IVTFKSMIG--CCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERL 303
Query: 301 IWWLDEDTYDSLMDSLSYEDTYSSVMNDYLAEGNMQRALQLDHDMSRDGYLSSYVAYSVL 360
+ + +D + SY Y+ +MN Y G +++ ++L +MS G + Y VL
Sbjct: 304 VLMM----HDKKLRVESY--LYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVL 357
Query: 361 INGLHKKARTREA 373
+NGL K + EA
Sbjct: 358 MNGLCKAGKVCEA 370
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 66 TYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTYNSLVFAYCRRDSVDKAVGILRAM 125
TY SV + L + L +I +G N+++ Y + +A I M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 126 AERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVDKGIFPDAATYSSLMEALCVEQRL 185
+ DV ++N +I F + + +++S++ R
Sbjct: 188 ----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRF 239
Query: 186 SEAFDLFREMLRGGVSPDELTYTRLLNACCLVGEFTKAFHLHDEMIHKGFLPDFVTGFSP 245
+A D+FREM V PD T LLNAC +G + +H+ ++ F +
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF------ELNS 293
Query: 246 AIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPDAVCYSTVISGL 292
+VT ALI C +EE L + P+ LS C++++I GL
Sbjct: 294 IVVT--ALIDMYCKCGCIEEGLNVFECAPKKQLS----CWNSMILGL 334
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 128/313 (40%), Gaps = 32/313 (10%)
Query: 43 GRIPEAEQMLEVMKCKGLFLDERTYSSVIGWFCNLNKIDSAHTLLSEMIAKGFSPSVVTY 102
G + A ++ + M K L ++SVI F K + A L +EM +KG P T
Sbjct: 37 GDVASAYKVFDKMPEKDLV----AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 103 NSLVFAYCRRDSVDKAVGILRAMAERGLSPDVDSYNRVISKFCXXXXXXXXXXXXXXXVD 162
SL+ A + ++ + M + GL+ ++ S N ++ + VD
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 163 KGIFPDAATYSSLMEALCVEQRLSEAFDLFREMLRG-GVSPDELTYTRLLNACCLVGEFT 221
K ++ +++SL+ L V EA +LF+ M G+ P E+T+ +L AC G
Sbjct: 153 K----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 222 KAFHLHDEMIHKGFLPDFVTGFSPAIVTYNALIHGLCFLDRVEEALEILRGMPEMGLSPD 281
+ F M + P I + ++ L +V++A E ++ MP + P+
Sbjct: 209 EGFEYFRRMREE-------YKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP---MQPN 258
Query: 282 AVCYSTVISGLKIETEDKAIWWLDEDTYD-SLMDSLSYEDTYSS----VMNDYLAEGNMQ 336
V + T++ + D D + + + L E +S + N Y +E
Sbjct: 259 VVIWRTLLGACTVHG--------DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 310
Query: 337 RALQLDHDMSRDG 349
++ M RDG
Sbjct: 311 DVQKIRKQMLRDG 323