Miyakogusa Predicted Gene

Lj0g3v0179269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0179269.1 tr|C7J3G3|C7J3G3_ORYSJ Os06g0137100 protein
OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=4
SV=,70.91,0.00000000000001,ARM repeat,Armadillo-type fold; no
description,Armadillo-like helical,CUFF.11363.1
         (179 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01950.3 | Symbols: ARK2 | armadillo repeat kinesin 2 | chr1:...   313   3e-86
AT1G01950.1 | Symbols: ARK2 | armadillo repeat kinesin 2 | chr1:...   313   3e-86
AT1G01950.2 | Symbols: ARK2 | armadillo repeat kinesin 2 | chr1:...   313   3e-86
AT1G12430.1 | Symbols: PAK, ARK3 | armadillo repeat kinesin 3 | ...   296   4e-81
AT1G12430.2 | Symbols: ARK3 | armadillo repeat kinesin 3 | chr1:...   292   1e-79
AT3G54870.1 | Symbols: MRH2, ARK1, CAE1 | Armadillo/beta-catenin...    50   6e-07

>AT1G01950.3 | Symbols: ARK2 | armadillo repeat kinesin 2 |
           chr1:325473-330403 FORWARD LENGTH=915
          Length = 915

 Score =  313 bits (803), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 146/177 (82%), Positives = 167/177 (94%)

Query: 3   EGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDV 62
           +GGI+LLS+TA+DAEDPQTLRMVAGAIANLCGNDK+   L S GGIKALLG+VRCGHPDV
Sbjct: 739 QGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWSDGGIKALLGMVRCGHPDV 798

Query: 63  LSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELALCH 122
           L+QVARGIANFAKCESRA+ QG+KSGRS+LIEDGALPWIVQ+AN+EAAPIRRHIELALCH
Sbjct: 799 LAQVARGIANFAKCESRATTQGVKSGRSLLIEDGALPWIVQHANDEAAPIRRHIELALCH 858

Query: 123 LAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVEY 179
           LAQHEVNAK+MISGGALWELVRIS++CSREDIRSLA RTLSS P F++E+RRL +++
Sbjct: 859 LAQHEVNAKEMISGGALWELVRISKECSREDIRSLAHRTLSSSPVFRSEIRRLGIQF 915


>AT1G01950.1 | Symbols: ARK2 | armadillo repeat kinesin 2 |
           chr1:325473-330403 FORWARD LENGTH=894
          Length = 894

 Score =  313 bits (803), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 146/177 (82%), Positives = 167/177 (94%)

Query: 3   EGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDV 62
           +GGI+LLS+TA+DAEDPQTLRMVAGAIANLCGNDK+   L S GGIKALLG+VRCGHPDV
Sbjct: 718 QGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWSDGGIKALLGMVRCGHPDV 777

Query: 63  LSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELALCH 122
           L+QVARGIANFAKCESRA+ QG+KSGRS+LIEDGALPWIVQ+AN+EAAPIRRHIELALCH
Sbjct: 778 LAQVARGIANFAKCESRATTQGVKSGRSLLIEDGALPWIVQHANDEAAPIRRHIELALCH 837

Query: 123 LAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVEY 179
           LAQHEVNAK+MISGGALWELVRIS++CSREDIRSLA RTLSS P F++E+RRL +++
Sbjct: 838 LAQHEVNAKEMISGGALWELVRISKECSREDIRSLAHRTLSSSPVFRSEIRRLGIQF 894


>AT1G01950.2 | Symbols: ARK2 | armadillo repeat kinesin 2 |
           chr1:325473-330403 FORWARD LENGTH=877
          Length = 877

 Score =  313 bits (803), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 146/177 (82%), Positives = 167/177 (94%)

Query: 3   EGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDV 62
           +GGI+LLS+TA+DAEDPQTLRMVAGAIANLCGNDK+   L S GGIKALLG+VRCGHPDV
Sbjct: 701 QGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWSDGGIKALLGMVRCGHPDV 760

Query: 63  LSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELALCH 122
           L+QVARGIANFAKCESRA+ QG+KSGRS+LIEDGALPWIVQ+AN+EAAPIRRHIELALCH
Sbjct: 761 LAQVARGIANFAKCESRATTQGVKSGRSLLIEDGALPWIVQHANDEAAPIRRHIELALCH 820

Query: 123 LAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVEY 179
           LAQHEVNAK+MISGGALWELVRIS++CSREDIRSLA RTLSS P F++E+RRL +++
Sbjct: 821 LAQHEVNAKEMISGGALWELVRISKECSREDIRSLAHRTLSSSPVFRSEIRRLGIQF 877


>AT1G12430.1 | Symbols: PAK, ARK3 | armadillo repeat kinesin 3 |
           chr1:4234122-4238552 REVERSE LENGTH=919
          Length = 919

 Score =  296 bits (759), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 141/178 (79%), Positives = 155/178 (87%)

Query: 1   MAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHP 60
           M +GGI LLS TA++AEDPQTLRMVAGAIANLCGNDK+   LRS+GGI ALLG+VRCGHP
Sbjct: 740 MDQGGIGLLSSTAANAEDPQTLRMVAGAIANLCGNDKLQTKLRSEGGIAALLGMVRCGHP 799

Query: 61  DVLSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELAL 120
           DVL+QVARGIANFAKCESRAS QG K G+S+LIEDGAL WIVQNA  E A IRRHIELAL
Sbjct: 800 DVLAQVARGIANFAKCESRASTQGTKRGKSLLIEDGALSWIVQNAKTETAAIRRHIELAL 859

Query: 121 CHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVE 178
           CHLAQHE NAK+M+  GA+WELVRISRDCSREDIRSLA RTL+S P F  ELRRLRV+
Sbjct: 860 CHLAQHEGNAKEMVKEGAMWELVRISRDCSREDIRSLAHRTLTSSPTFLTELRRLRVD 917


>AT1G12430.2 | Symbols: ARK3 | armadillo repeat kinesin 3 |
           chr1:4234122-4238552 REVERSE LENGTH=920
          Length = 920

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 141/179 (78%), Positives = 155/179 (86%), Gaps = 1/179 (0%)

Query: 1   MAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHP 60
           M +GGI LLS TA++AEDPQTLRMVAGAIANLCGNDK+   LRS+GGI ALLG+VRCGHP
Sbjct: 740 MDQGGIGLLSSTAANAEDPQTLRMVAGAIANLCGNDKLQTKLRSEGGIAALLGMVRCGHP 799

Query: 61  DVLSQVARGIANFAKCESRASNQ-GIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELA 119
           DVL+QVARGIANFAKCESRAS Q G K G+S+LIEDGAL WIVQNA  E A IRRHIELA
Sbjct: 800 DVLAQVARGIANFAKCESRASTQAGTKRGKSLLIEDGALSWIVQNAKTETAAIRRHIELA 859

Query: 120 LCHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVE 178
           LCHLAQHE NAK+M+  GA+WELVRISRDCSREDIRSLA RTL+S P F  ELRRLRV+
Sbjct: 860 LCHLAQHEGNAKEMVKEGAMWELVRISRDCSREDIRSLAHRTLTSSPTFLTELRRLRVD 918


>AT3G54870.1 | Symbols: MRH2, ARK1, CAE1 | Armadillo/beta-catenin
           repeat family protein / kinesin motor family protein |
           chr3:20330806-20335823 FORWARD LENGTH=941
          Length = 941

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 28/37 (75%)

Query: 1   MAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDK 37
           M +GG  LL+   +  +DPQTLRMVAGA+ANLCGN K
Sbjct: 882 MNKGGAQLLAKMVTKTDDPQTLRMVAGALANLCGNGK 918