Miyakogusa Predicted Gene

Lj0g3v0178059.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0178059.2 tr|E9BWP6|E9BWP6_CAPO3 MSF1 OS=Capsaspora
owczarzaki (strain ATCC 30864) GN=CAOG_00747 PE=4
SV=1,31.67,2e-18,PRELI,PRELI/MSF1; SUBFAMILY NOT NAMED,NULL; MSF1/PX19
RELATED,NULL; PRELI_MSF1,PRELI/MSF1,CUFF.11257.2
         (183 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13070.1 | Symbols:  | MSF1-like family protein | chr5:414821...   298   2e-81

>AT5G13070.1 | Symbols:  | MSF1-like family protein |
           chr5:4148216-4149062 FORWARD LENGTH=183
          Length = 183

 Score =  298 bits (762), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 136/181 (75%), Positives = 160/181 (88%), Gaps = 2/181 (1%)

Query: 1   MVKAYRQEHVYKHPWERVTSASWRKFADAENKRVLSHILEVDTLSQSIDPSSGKLYTTRA 60
           MVKAYRQEHVYKHPWERV++ASWRKFAD ENKR+LSHILEVDTL++ +D  +GKL+TTRA
Sbjct: 1   MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRA 60

Query: 61  ITVQCP--WLVRRLIGEDICHCVESTVVDAPSRSMQQVYRNVSLQKFIEVEEKTRYDPHP 118
           +T+  P  W + R+IG+DICHCVESTVVD  SRSMQ   +N+SL+KFIEVEE+ RYDPHP
Sbjct: 61  LTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHP 120

Query: 119 DNTAGWTVCQQETRIRIKPLSALASMAEKVEQRCADRFLQNSAKSREVMERICKYLEAES 178
           DN + WTVC QET IRIKPLSALASMAEKVEQ+CA++F+QNSAK REVMERICKY+EAES
Sbjct: 121 DNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAES 180

Query: 179 S 179
           +
Sbjct: 181 A 181