Miyakogusa Predicted Gene

Lj0g3v0177719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0177719.1 Non Chatacterized Hit- tr|I1KXQ0|I1KXQ0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,79.3,0,seg,NULL,CUFF.11279.1
         (584 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17900.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   600   e-172

>AT3G17900.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 45
           Blast hits to 44 proteins in 14 species: Archae - 0;
           Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39;
           Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
           | chr3:6128983-6133069 FORWARD LENGTH=838
          Length = 838

 Score =  600 bits (1547), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 326/547 (59%), Positives = 397/547 (72%), Gaps = 17/547 (3%)

Query: 42  GRIQVVLQLNVGIDFLKDPCIEILQYEKYQDKILSSEKQENSVYANQDPCRELLKWILPL 101
           G I V LQ+ + +D  K+P IEILQ+EK+QD       Q+ +   ++DP   LLKW++PL
Sbjct: 303 GDIVVSLQVYI-VDCPKEPIIEILQFEKHQD-------QDQNPENDKDPYGNLLKWLIPL 354

Query: 102 DNNLPPAFLPLSPHLSSNSGIGSTSQRSNISASSGSQLFSFGSHFRSYSMSSLPQSTSGP 161
           DN +      L P ++ +  I ST+ +  IS++SGSQLFSFG HFRSYSMS+LP +T+  
Sbjct: 355 DNTISQQPRSLPPPITPSPSISSTAHKPAISSTSGSQLFSFG-HFRSYSMSALPPNTAPV 413

Query: 162 TAPLKAASSKPNFDIDDWDQISSQRLR--KKHGVEELLSFRGVSLERERFSVCCGLEGIY 219
           T P+K  SSKP+FDI+DWD  S Q +R  +K G EELLSFRGV+LER+RFSV CGLEGI 
Sbjct: 414 TGPIKTQSSKPSFDIEDWDSYSGQTVRNGQKSGTEELLSFRGVALERDRFSVRCGLEGIC 473

Query: 220 TPGRRWRRKLEIIQPVEINSFAADCNSEDLLCVQIKNVAPAHAPDIVIFVDAITIIFEEA 279
            PGRRWRRKLEIIQP+EINSFAADCN++DLLCVQIKNVAP HAPDIVI++DAITI+FEEA
Sbjct: 474 IPGRRWRRKLEIIQPIEINSFAADCNTDDLLCVQIKNVAPTHAPDIVIYIDAITIVFEEA 533

Query: 280 TNSGPPSSLPIACIEAGNDHSLPNLALRRGEEHSFILKPATSMWNNLKVQNGSSHLSKLQ 339
             +  PSS+PIACIEAGN+HSLPNL LR+GEEHSFI+KPA S+ +NLK    S+  +KL+
Sbjct: 534 GKNASPSSVPIACIEAGNEHSLPNLTLRKGEEHSFIVKPAFSVGSNLKP---SAARNKLK 590

Query: 340 SGNLS-SKLSLERSKIAFLDDHYAIMVSCRCNYTASRLFFKQPTSWRPRTSRDIMISVAS 398
           S +LS   ++ ER       D YA+MVSCRCNYT SRLFFKQ T WRPR SRD+MISVAS
Sbjct: 591 SSSLSLPTVNFERKGSGLSGDQYAVMVSCRCNYTESRLFFKQRTKWRPRVSRDLMISVAS 650

Query: 399 EMSGQSPGPSERNSQLPVQVLTFQASNLTPEDLTLTVLAXXX-XXXXXXXXXXXXXXXXX 457
           EMSG+  GP  R SQLPVQ+LT QASNLT EDL+LTVLA                     
Sbjct: 651 EMSGEPCGPHGRASQLPVQILTLQASNLTSEDLSLTVLAPASFTSPPTVVSLNSTPTTPI 710

Query: 458 XXFIGFAEFLGRISGE-RLIGATQGHSLTFAKENDKQSDDGRCQTVSTNDVIPSSGLGCT 516
             F+GF++F  R+  E R     +  SL       +  ++   ++ + +DV+P SGLGCT
Sbjct: 711 SPFLGFSDFTERVQNEKRNTTVRKQQSLPPIPLETRTENNTNGESSNPSDVVPKSGLGCT 770

Query: 517 HLWLQSRVPLGSIPSQSTATIKLELLPLTDGIITLDSLQIDVKEKGVTYIPERSLKINAT 576
           HLWLQSRVPLG +PS+STATIKLELLPLTDGIITLD+LQI  KEKG  YIPE+SLKINAT
Sbjct: 771 HLWLQSRVPLGCVPSKSTATIKLELLPLTDGIITLDTLQIHAKEKGRRYIPEQSLKINAT 830

Query: 577 SSISKGI 583
           SSIS GI
Sbjct: 831 SSISSGI 837