Miyakogusa Predicted Gene

Lj0g3v0176749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176749.1 tr|D5GI94|D5GI94_TUBMM Whole genome shotgun
sequence assembly, scaffold_45, strain Mel28 OS=Tuber
me,50.57,7e-19,seg,NULL; XYLULOSE KINASE,NULL; SUGAR
KINASE,NULL,25082_g.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49650.1 | Symbols: XK-2, XK2 | xylulose kinase-2 | chr5:2015...   141   1e-34
AT5G49650.2 | Symbols: XK-2, XK2 | xylulose kinase-2 | chr5:2015...   141   1e-34

>AT5G49650.1 | Symbols: XK-2, XK2 | xylulose kinase-2 |
           chr5:20152898-20155574 FORWARD LENGTH=558
          Length = 558

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 65/87 (74%), Positives = 73/87 (83%)

Query: 28  NSNLTIVASELVHFDSDLPHYKTKDGVCRDPSGNGRIVSPILMWVEALDLIFQKLSKSNF 87
           +SNL I+ +ELVHFDSDLP YKTKDGV RD + NGRIVSP LMWVEA DLI QKLS +NF
Sbjct: 28  DSNLNIIKTELVHFDSDLPQYKTKDGVYRDTTVNGRIVSPTLMWVEAFDLILQKLSNANF 87

Query: 88  DFSKVAGVFGSGQQHGSVYWKKGSSQI 114
           DF+KV  V GSGQQHGSVYW KGSS++
Sbjct: 88  DFAKVIAVSGSGQQHGSVYWSKGSSEV 114


>AT5G49650.2 | Symbols: XK-2, XK2 | xylulose kinase-2 |
           chr5:20152898-20155093 FORWARD LENGTH=426
          Length = 426

 Score =  141 bits (355), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 65/87 (74%), Positives = 73/87 (83%)

Query: 28  NSNLTIVASELVHFDSDLPHYKTKDGVCRDPSGNGRIVSPILMWVEALDLIFQKLSKSNF 87
           +SNL I+ +ELVHFDSDLP YKTKDGV RD + NGRIVSP LMWVEA DLI QKLS +NF
Sbjct: 28  DSNLNIIKTELVHFDSDLPQYKTKDGVYRDTTVNGRIVSPTLMWVEAFDLILQKLSNANF 87

Query: 88  DFSKVAGVFGSGQQHGSVYWKKGSSQI 114
           DF+KV  V GSGQQHGSVYW KGSS++
Sbjct: 88  DFAKVIAVSGSGQQHGSVYWSKGSSEV 114