Miyakogusa Predicted Gene

Lj0g3v0175809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0175809.1 Non Chatacterized Hit- tr|I3SFR5|I3SFR5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.44,0,ETF_ALPHA,Electron transfer flavoprotein, alpha subunit,
C-terminal, conserved site; DHS-like NAD/FA,CUFF.11074.1
         (360 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50940.1 | Symbols: ETFALPHA | electron transfer flavoprotein...   444   e-125

>AT1G50940.1 | Symbols: ETFALPHA | electron transfer flavoprotein
           alpha | chr1:18878038-18879939 REVERSE LENGTH=363
          Length = 363

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/332 (64%), Positives = 261/332 (78%), Gaps = 2/332 (0%)

Query: 30  RLGSTLVVAEHDGGAIRAPSLSALTATTCLPDXXXXXXXXXXXXXXXXHQAASHAASCHP 89
           R  STL++AEH+ G I+  ++S + A   L +                 +AAS AASCHP
Sbjct: 33  RCISTLILAEHESGTIKPQTVSTVVAANSLGESSSISLLLAGSGSSL-QEAASQAASCHP 91

Query: 90  SISQVLVADSDTFKSPLAEPWAKLVHMVQQRGGYSHIIAASSSFGKNVMPRAAALLDVSP 149
           S+S+VLVADSD F+  LAEPWAKLV  V+Q+G YSHI+A+SSSFGKN++PR AALLDVSP
Sbjct: 92  SVSEVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAALLDVSP 151

Query: 150 VTDVTGISDSHTFVRPIYAGNALCTVRYTGAGPCILTIRATSFPAPQKSVDSKSNEASIS 209
           +TDV  I  S  F+RPIYAGNALCTVRYTGAGPC+LTIR+TSFP    + +S+S +A++S
Sbjct: 152 ITDVVKILGSDQFIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKATVS 211

Query: 210 QVDLSTFDED-LGKSRYISQTTQEDERPDLGNARIVVSGGRALKNAENFKLIENLAEKLX 268
           Q+DLS F++D + KSRY+ ++TQ+ ERPDLG+AR+V++GGRALK+ ENFK+IE LAEKL 
Sbjct: 212 QIDLSNFEDDSVSKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFKMIEKLAEKLG 271

Query: 269 XXXXXXXXXXXXXFVPNELQVGQTGKIVAPELYMAFGVSGAIQHIAGMRDSKVIVAVNND 328
                        +VPN+LQVGQTGKIVAPELYMAFGVSGAIQH+AG++DSKVIVAVN D
Sbjct: 272 GAVGATRAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGIKDSKVIVAVNKD 331

Query: 329 ADAPIFQVADYGLVGDLFEVIPELLEKLPEKK 360
           ADAPIFQVADYGLVGDLFEVIPELLEKLPEKK
Sbjct: 332 ADAPIFQVADYGLVGDLFEVIPELLEKLPEKK 363