Miyakogusa Predicted Gene

Lj0g3v0174279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174279.1 tr|B9N5N6|B9N5N6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_582565 PE=4 SV=1,65.97,0,no
description,NULL; no description,BolA protein; BOLA-LIKE PROTEIN
CGI-143,NULL; BOLA-LIKE PROTEIN-,CUFF.10945.1
         (358 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26500.1 | Symbols: EMB1374, CPSUFE, ATSUFE, SUFE1 | chloropl...   398   e-111
AT1G55805.1 | Symbols:  | BolA-like family protein | chr1:208589...   137   1e-32
AT1G67810.1 | Symbols: SUFE2 | sulfur E2 | chr1:25426488-2542726...    82   5e-16
AT5G50210.1 | Symbols: QS, OLD5, SUFE3 | quinolinate synthase | ...    81   1e-15
AT5G17560.1 | Symbols:  | BolA-like family protein | chr5:578847...    55   8e-08
AT5G09830.1 | Symbols:  | BolA-like family protein | chr5:305781...    51   1e-06

>AT4G26500.1 | Symbols: EMB1374, CPSUFE, ATSUFE, SUFE1 | chloroplast
           sulfur E | chr4:13382456-13383571 REVERSE LENGTH=371
          Length = 371

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/310 (67%), Positives = 237/310 (76%), Gaps = 36/310 (11%)

Query: 69  LQPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVW 128
           LQPIEELPPKLQEIVKLFQSVQEPKAKYEQL+FYGKNL PLDSQFK++ENKVEGCVSQVW
Sbjct: 77  LQPIEELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVW 136

Query: 129 VRAYLDQEKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDFAVLLGLQQSLTP 188
           VRA+ D+E+NVVYEADSDSVLTKGLAALLV+GLSGRPV E++R+TPDFAVLLGLQQSL+P
Sbjct: 137 VRAFFDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPDFAVLLGLQQSLSP 196

Query: 189 SRNNGFLNMLRLMQKKALMLYVED------------------EKGAELNSPGNSEVKDDS 230
           SRNNG LNML+LMQKKAL L V+                   E   E N P         
Sbjct: 197 SRNNGLLNMLKLMQKKALHLEVKGEEDSSSGESSESSFVSIPETKDEANVPEVDLESKPD 256

Query: 231 FVENSSGGHSSEIDNSETXXXXXXXXXXXXXXDGGELGGRGRRIKEKMEKELNPVELQVE 290
            VE+     + +ID+SE+                  LG RG RI+EK+EKEL+PVEL+VE
Sbjct: 257 LVEDLG---TEKIDDSESGSNVVA------------LGSRGMRIREKLEKELDPVELEVE 301

Query: 291 DVSYQHAGHAGVRGS---DGETHFNLKVVSAEFEGKSLVKRHRLIYSLLQEELQSGLHAL 347
           DVSYQHAGHA VRGS   DGETHFNL++VS  F+GKSLVKRHRLIY LLQ+EL+SGLHAL
Sbjct: 302 DVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHRLIYDLLQDELKSGLHAL 361

Query: 348 SIVAKTPSEV 357
           SIVAKTP+EV
Sbjct: 362 SIVAKTPAEV 371


>AT1G55805.1 | Symbols:  | BolA-like family protein |
           chr1:20858956-20859438 REVERSE LENGTH=160
          Length = 160

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/95 (67%), Positives = 80/95 (84%), Gaps = 1/95 (1%)

Query: 263 DGGELGGRGRRIKEKMEKELNPVELQVEDVSYQHAGHAGVRG-SDGETHFNLKVVSAEFE 321
           D G +  R  R++EK++KEL PVEL +EDVSYQHAGHAG++G +D ETHFN+K+VS  FE
Sbjct: 61  DSGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFE 120

Query: 322 GKSLVKRHRLIYSLLQEELQSGLHALSIVAKTPSE 356
           G +LVKRHRL+Y LL+EEL +GLHALSIV+KTPSE
Sbjct: 121 GMNLVKRHRLVYHLLREELDTGLHALSIVSKTPSE 155


>AT1G67810.1 | Symbols: SUFE2 | sulfur E2 | chr1:25426488-25427264
           FORWARD LENGTH=258
          Length = 258

 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 1/136 (0%)

Query: 78  KLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWVRAYLDQEK 137
           KL+ +V  F+S+ EP  + ++LL Y   L PLD   +  EN+V GC +QVW+   +D+  
Sbjct: 77  KLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFG 136

Query: 138 NVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRV-TPDFAVLLGLQQSLTPSRNNGFLN 196
            + ++ADSDS ++KG  + L+  L G   +EV+ V + D + +         SR N + N
Sbjct: 137 RMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHN 196

Query: 197 MLRLMQKKALMLYVED 212
           +L  MQK+ + L   D
Sbjct: 197 VLMSMQKRTMTLVATD 212


>AT5G50210.1 | Symbols: QS, OLD5, SUFE3 | quinolinate synthase |
           chr5:20442803-20445706 FORWARD LENGTH=718
          Length = 718

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 9/149 (6%)

Query: 70  QPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWV 129
           Q  E +P KLQ +VK F+S+ EP  + + +L Y   L  +    K++ N+V GC ++VW+
Sbjct: 79  QTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKTESNRVMGCTARVWL 138

Query: 130 RAYLDQEKNVVYEADSDSVLTKGLAALLVQGLS-GRPVQEVIRVTPDFAV----LLGLQQ 184
            A L Q+  + + ADSDS ++KG+ + L+Q L    PV+ +   T D A     LLG ++
Sbjct: 139 DAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTEDLAELNVGLLGGER 198

Query: 185 SLTPSRNNGFLNMLRLMQKKALMLYVEDE 213
               SR N + N+L  MQKK   L  E E
Sbjct: 199 ----SRVNTWYNVLVSMQKKTRRLVAERE 223


>AT5G17560.1 | Symbols:  | BolA-like family protein |
           chr5:5788474-5789671 FORWARD LENGTH=177
          Length = 177

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 13/82 (15%)

Query: 277 KMEKELNPVELQVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLIYSLL 336
           K++++LN   + V D+S            DG  H  + VVS+ FEG+S V R R++Y  +
Sbjct: 108 KIKEQLNAESVTVTDMS-----------GDGR-HVCINVVSSAFEGQSAVNRQRMVYKAI 155

Query: 337 QEELQSGLHALS-IVAKTPSEV 357
            EELQ+ +HA+  +  KTPSEV
Sbjct: 156 WEELQNVVHAVDQMTTKTPSEV 177


>AT5G09830.1 | Symbols:  | BolA-like family protein |
           chr5:3057816-3058769 REVERSE LENGTH=93
          Length = 93

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 13/85 (15%)

Query: 273 RIKEKMEKELNPVELQVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLI 332
           +++  +  +L P+ L+V D+S    G  G       + F ++VVS +FEGK L++RHR++
Sbjct: 6   QVEASLTSKLKPIHLEVIDIS----GGCG-------SSFEVEVVSEQFEGKRLLERHRMV 54

Query: 333 YSLLQEELQSGLHALSI-VAKTPSE 356
            + L+EE++  +HALSI  A+TP +
Sbjct: 55  NAALEEEMKE-IHALSIKKAQTPQQ 78