Miyakogusa Predicted Gene
- Lj0g3v0173889.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0173889.1 Non Chatacterized Hit- tr|K3Y5S7|K3Y5S7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009566,28.37,2e-17,ZF_RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; zf-RING_2,Zinc
fin,CUFF.10924.1
(745 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 283 2e-76
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 263 3e-70
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 209 8e-54
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 191 2e-48
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 191 2e-48
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 191 2e-48
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 182 1e-45
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 152 9e-37
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 149 7e-36
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 149 7e-36
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 141 2e-33
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 141 2e-33
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 131 2e-30
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 129 6e-30
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 129 6e-30
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 125 8e-29
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 125 8e-29
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 115 2e-25
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 112 1e-24
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 112 1e-24
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 111 2e-24
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 89 1e-17
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 81 3e-15
AT1G36950.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 1e-14
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 4e-14
AT4G00070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 74 3e-13
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 74 4e-13
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 74 4e-13
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 4e-11
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 5e-09
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 6e-09
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 59 2e-08
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 58 3e-08
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 4e-08
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 57 6e-08
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 7e-08
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 7e-08
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 1e-07
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 2e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 2e-07
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 55 3e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 3e-07
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 3e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 3e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 54 3e-07
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 54 4e-07
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 4e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 5e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 54 5e-07
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 54 5e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 5e-07
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 6e-07
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 53 8e-07
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 9e-07
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 1e-06
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-06
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 2e-06
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-06
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 2e-06
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 2e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 2e-06
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 3e-06
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 3e-06
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 3e-06
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 3e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 3e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 51 4e-06
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 51 4e-06
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 51 4e-06
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 4e-06
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 4e-06
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 4e-06
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 6e-06
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-06
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 7e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 50 8e-06
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 260/781 (33%), Positives = 357/781 (45%), Gaps = 137/781 (17%)
Query: 1 MQGQRGTLGSLAETLEFEFEYGPTQGTAAADQ----HSFWNN-----ILSPTDMNPSYIN 51
MQG+R +LG L+E L FE +G + D HS +N +++ ++ N S N
Sbjct: 1 MQGERASLGYLSEALNFE--HGSSSSNGVIDHWENIHSLGDNDLQDYMIANSESNTSLAN 58
Query: 52 SVNHEWQNLSGWSLGEPSSSNTLNEVNTNEQKRELGLSSSMNAGAIGGPRLEQRRLEPTN 111
SV HE Q L +SLGE SSS T +E +++ ++ R+E R +
Sbjct: 59 SVYHEQQGLRRFSLGEASSSGTKDEASSHNEQ-----------------RMETRCFDGRG 101
Query: 112 AFSLDNVNSSPMYISNSNSHLVSQNLNLNAGLPDSGSGNSYHVEHPNLHKSSVPNVPVNE 171
+D P++ S ++ QN+NLNA + ++E
Sbjct: 102 NEIID---LDPVFAQPSGTNQPVQNVNLNAEY-----------------------IEIHE 135
Query: 172 HIPPAIGSGSFLQPSGSNNM-------FVEDTDGRPGYSLDTRRVSCKRKAIERXXXXXX 224
I P G F++ +G F E+ G G S++ RR SCKRKA+E
Sbjct: 136 DINPYRGRSGFIEANGPGTRVSQPGRSFEENGVG-TGSSVEGRRASCKRKALEGSISQSS 194
Query: 225 XXXXXXYTQHTDGSAWNILPTQDYAGSIFNRSAPAEQANARLGLSMGG--GASESIPESN 282
+ Q + S+W T G+ N S + N G+ G S P
Sbjct: 195 SGGYHDF-QRGESSSWTPGSTVFRPGNGLNISGSLD--NGPRGMVSGTVPNFPVSAPNFP 251
Query: 283 VAGSSESFHRNFRLRVNPSSQQIPVPPTTFSNGSVIRNSAVPSSLPVFQRFHPVDNSQDL 342
V+ +ES RN +R NPS Q V P+TF+ G+V+R PS L + + +S DL
Sbjct: 252 VSAIAESSSRNICVRSNPSDHQETVNPSTFAAGTVVRRPVPPSQLNLSRHLPADQHSLDL 311
Query: 343 XXXXXXXXXXDAMIPQSQPLRIRDLQRN-IESFRRSGGSSSTNNHSPNPVISANRDPRPN 401
+ P S P+ I R + FR +G SS + N R+ +
Sbjct: 312 RPGQSFVVSRN---PNSTPVSIPPGSRTMLPPFRWTG--SSLVGGTSNSTAPVERNLHLD 366
Query: 402 EEGSSRNMPRNILEHPVFVPPTNIRNVVRNPTRAPSSANVSIPGNVAPSSIPGNVASSSI 461
E SR++P N LE P+F P V N R+ SS NV+ GN+ S+S
Sbjct: 367 ET-RSRSIPGNTLEIPMFAAPE-----VGNFARSQSSRNVT----------NGNLNSAS- 409
Query: 462 PGNIAPARIPGNIAPASVPGNVAPSSIPGNVAPSLRTGLNSTINSSAASAWVSRPNPQQY 521
S G+ P + +L AW S N Y
Sbjct: 410 --------------SVSRTGSTTSVPPPPPPSSNL--------------AWTSYQNSPHY 441
Query: 522 PRR---LSEYVRRSLFSP-GSEAAGSPSNNYSSLH--GPPTSSESR-----GPSSGVNPG 570
RR SE RRSL S ++A S ++ +L PP SS+ G +S ++
Sbjct: 442 QRRRTERSELARRSLLSSLAADATNQRSGDHPTLRSLAPPASSDGLVLQPGGDNSQMHNR 501
Query: 571 AAS----WLERSADSEFGIPQSLRSLAVAGEGGNRLVSEXXXXXXXXXXXXXX----XXE 622
A S +R DS GIP LR+LA A G +RL+ E
Sbjct: 502 AYSRAGPLFDRQGDSVVGIPHPLRALAAASRGRSRLMVSQMQNVLDVMRRDANNNNLRLE 561
Query: 623 DVMILDQSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQ 682
DVM+L+ S+ A HDR+RDMRLDVDNMSYEELLALEERIG+V TG+ EETI LKQ
Sbjct: 562 DVMLLNHSVLFDGATGHDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQ 621
Query: 683 KKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTG 742
+KY + S DAEPCCVCQEEY +G+D+G+L CGH +H+ CIK+WL KNLCPICKTTG
Sbjct: 622 RKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKTTG 681
Query: 743 L 743
L
Sbjct: 682 L 682
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 251/769 (32%), Positives = 343/769 (44%), Gaps = 158/769 (20%)
Query: 1 MQGQRGTLGSLAETLEFEFEYGPTQGTAAADQHSFWNNIL------------SPTDMNPS 48
MQG+R +LGSL++ L FE G T A DQ W N+ S D NP+
Sbjct: 1 MQGERASLGSLSKALNFE--RGSTSSNAVVDQQIRWENLHNYGDNDLQDYMSSAADTNPT 58
Query: 49 YINSVNHEWQNLSGWSLGEPSSSNTLNE-VNTNEQKRELGLSSSMNAGAIGGPRLEQRRL 107
+ NSV HE + L +++GE SSS T NE + EQ + +G R E++R
Sbjct: 59 FANSVYHEKRGLQRFNIGEASSSGTKNEGASLTEQWKGIG-------------RFEEQR- 104
Query: 108 EPTNAFSLDNVNSSPMYISNSNSHLVSQNLNLNAGLPDSGSGNSYHVEHPNLHKSSVPNV 167
D + SP+++ SN V +++NLNA + H+E N
Sbjct: 105 -------NDKLELSPLFVQPSNGSRVVRDVNLNAEYNE-------HLEDMN--------- 141
Query: 168 PVNEHIPPAIGSGSFLQPSGSNNMFVEDTDGRPGYSLDTRRVSCKRKAIERXXXXXXXXX 227
P + G F + +G + F+ D R G S+D RR SCKRKA++
Sbjct: 142 ------PVTVHPGHF-EVNGLRSEFLLDNSVRAGSSVDGRRASCKRKALDASGGQSSSTG 194
Query: 228 XXXYTQHTDGSAWNILPTQDYAGSIFNRSAPAEQANARLGLSMGGGASESIPESNVAGSS 287
Q S+W PT ++ + A N L G S ++P + +
Sbjct: 195 GFREFQRGVSSSWISGPT------YYSPAMTANDLNISLDHGRRGLVSSAVPNLSPPTIT 248
Query: 288 ESFHRNFRLRVNPSSQQIPVPPTTFSNGSVIRNSAVPSSLPVFQRFHPVDNSQDLXXXXX 347
ES RN+ + VNP+ QQ T SN + NS P + P D+ Q
Sbjct: 249 ESSSRNYPVWVNPTYQQ-----ETVSNFAPSLNS--PGLI-------PADHQQISMRYGH 294
Query: 348 XXXXXDAMIPQSQPLRIRDLQRNIESFRRSGGSSSTNNHSPNPVISANRDPRPNEEGSSR 407
+ P + + + RN + S ++ ++ S PV + R
Sbjct: 295 ALGNFASQNPNAPATHMPPVSRNTFQWNTSPVAAVISSSSATPV---------DRNVIHR 345
Query: 408 NMPR---NILEHPVFVPPTNIRNVVRNPTRAPSSANVSIPGNVAPSSIPGNVASSSIPGN 464
N R N LE P+FVP +RNV A+ I N + + +VASSS +
Sbjct: 346 NATRQRSNTLEIPLFVPAPELRNV----------AHGHISRNASGAR---HVASSSSRTS 392
Query: 465 IAPARIPGNIAPASVPGNVAPSSIPGNVAPSLRTGLNSTINSSAASAWVSRPNPQQYPRR 524
+ P +PSS P+L N+++++ RR
Sbjct: 393 VQP----------------SPSS------PALTPYQNNSLHNQ---------------RR 415
Query: 525 LSEYVRRSLFS---PGSEAA------GSPSNNYSSLHGPPTSSESRGPSSGVNPGAASWL 575
LSE RRSL S AA SP+ + G TS SS P
Sbjct: 416 LSENFRRSLLSSLVTQQRAARSLAHPASPNEHVLQSGGDNTSQVHNRASSRAGP------ 469
Query: 576 ERSADSEFGIPQSLRSLAVAGEGGNRL-VSEXXXXXXXXXXXXXXXXEDVMILDQSMFAG 634
R GI SLR LA G R+ SE EDVM+L+QS+ G
Sbjct: 470 -RQGQDATGISHSLRGLASTSRGRTRMGASEIRNILEHMRRAGNLRLEDVMLLNQSIMLG 528
Query: 635 IANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGD 694
A+IHDR+RDMRLDVDNM+YEELL+LEERIG+V TGL EETI LKQ+KY + S +
Sbjct: 529 AADIHDRYRDMRLDVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSSTRSSQE 588
Query: 695 AEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGL 743
EPCCVCQEEY + ++IG L CGH +H+ CIK+WL KNLCPICKTTGL
Sbjct: 589 VEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICKTTGL 637
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Query: 575 LERSADSEFGIPQSLRSLAVAGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFAG 634
LER D + RSLA +G NRL+SE ED M+ D ++ G
Sbjct: 496 LERQND-HLHLRHLGRSLAADNDGRNRLISEIRQVLSAMRRGENLRFEDYMVFDPLIYQG 554
Query: 635 IANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKY-SAEPGSQG 693
+A +HDRHRDMRLDVDNMSYEELLAL ERIG+V+TGL+EE I+K++KQ K+ S+ GS
Sbjct: 555 MAEMHDRHRDMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQ 614
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGLA 744
D EPCCVCQEEY +GDD+G+L CGH +HT C+KQWLM KNLCPICKT L+
Sbjct: 615 DMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKTVALS 665
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 111/158 (70%), Gaps = 4/158 (2%)
Query: 590 RSLAVAGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFAGIANIHDRHRDMRLDV 649
RSLA G G N+++SE ED M+ D ++ G+ ++HDRHR+MRLDV
Sbjct: 544 RSLAADGNGRNQIISEIRQVLHAMRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDV 603
Query: 650 DNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKY-SAEPGS---QGDAEPCCVCQEEY 705
DNMSYEELLAL ERIG+V+TGL+EE I+K +KQ K+ S+ P S + EPCC+CQEEY
Sbjct: 604 DNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEY 663
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGL 743
+GD++G+L CGH +H CIKQW+M KNLCPICKT L
Sbjct: 664 VEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 111/158 (70%), Gaps = 4/158 (2%)
Query: 590 RSLAVAGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFAGIANIHDRHRDMRLDV 649
RSLA G G N+++SE ED M+ D ++ G+ ++HDRHR+MRLDV
Sbjct: 544 RSLAADGNGRNQIISEIRQVLHAMRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDV 603
Query: 650 DNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKY-SAEPGS---QGDAEPCCVCQEEY 705
DNMSYEELLAL ERIG+V+TGL+EE I+K +KQ K+ S+ P S + EPCC+CQEEY
Sbjct: 604 DNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEY 663
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGL 743
+GD++G+L CGH +H CIKQW+M KNLCPICKT L
Sbjct: 664 VEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 111/158 (70%), Gaps = 4/158 (2%)
Query: 590 RSLAVAGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFAGIANIHDRHRDMRLDV 649
RSLA G G N+++SE ED M+ D ++ G+ ++HDRHR+MRLDV
Sbjct: 544 RSLAADGNGRNQIISEIRQVLHAMRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDV 603
Query: 650 DNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKY-SAEPGS---QGDAEPCCVCQEEY 705
DNMSYEELLAL ERIG+V+TGL+EE I+K +KQ K+ S+ P S + EPCC+CQEEY
Sbjct: 604 DNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEY 663
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGL 743
+GD++G+L CGH +H CIKQW+M KNLCPICKT L
Sbjct: 664 VEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 108/154 (70%), Gaps = 4/154 (2%)
Query: 590 RSLAVAGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFAGIANIHDRHRDMRLDV 649
RSLA G G N+++SE ED M+ D ++ G+ ++HDRHR+MRLDV
Sbjct: 544 RSLAADGNGRNQIISEIRQVLHAMRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRLDV 603
Query: 650 DNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKY-SAEPGS---QGDAEPCCVCQEEY 705
DNMSYEELLAL ERIG+V+TGL+EE I+K +KQ K+ S+ P S + EPCC+CQEEY
Sbjct: 604 DNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEY 663
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
+GD++G+L CGH +H CIKQW+M KNLCPI +
Sbjct: 664 VEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPIFR 697
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 88/132 (66%), Gaps = 12/132 (9%)
Query: 622 EDVMILDQSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLK 681
ED++I++ + G + HD+HRDMRLD+DNMSYEELLALEERIG V+T LTEE I K LK
Sbjct: 362 EDLLIMETGLLLGGLSFHDQHRDMRLDIDNMSYEELLALEERIGTVSTALTEEAISKCLK 421
Query: 682 QKKYSAEPGSQG-----------DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLM 730
Y +P S G DA+ C +CQEEY GD++G L+C H YH C+++WL
Sbjct: 422 TSIYQMKPLSYGSITKSPSDNKEDAK-CSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLR 480
Query: 731 HKNLCPICKTTG 742
K+ CPICK T
Sbjct: 481 IKSWCPICKATA 492
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 535 SPGSEAAGSPSNNYSSLHGPPTSSESRGPSSGVNPGAASWLERSADSEFGIPQSLRSLAV 594
S +EA+ SP N+YS P SS R S + PG+ S E G+ +SL +
Sbjct: 311 SRSAEASRSPLNSYSR----PISSNGR-LRSLMMPGSPS--------EAGLSRSLMNRDT 357
Query: 595 AGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFA-GIANIHDRHRDMRLDVDNMS 653
V+E E + +L+ ++F G+++ HD+HRDMRLD+DNMS
Sbjct: 358 FRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLFLNGMSSFHDQHRDMRLDIDNMS 417
Query: 654 YEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGS------QGDAEPCCVCQEEYND 707
YEELLALEE++G V+T L+EE ++K LK Y S + D C +CQEEY D
Sbjct: 418 YEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSICQEEYVD 477
Query: 708 GDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTG 742
GD++G+L C H YH C +QWL KN CPICKT+
Sbjct: 478 GDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSA 512
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 119/215 (55%), Gaps = 20/215 (9%)
Query: 535 SPGSEAAGSPSNNYSSLHGPPTSSESRGPSSGVNPGAASWLERSADSEFGIPQSLRSLAV 594
S +EA+ SP N+YS P SS R S + PG+ S E G+ +SL +
Sbjct: 311 SRSAEASRSPLNSYSR----PISSNGR-LRSLMMPGSPS--------EAGLSRSLMNRDT 357
Query: 595 AGEGGNRLVSEXXXXXXXXXXXXXXXXEDVMILDQSMFA-GIANIHDRHRDMRLDVDNMS 653
V+E E + +L+ ++F G+++ HD+HRDMRLD+DNMS
Sbjct: 358 FRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLFLNGMSSFHDQHRDMRLDIDNMS 417
Query: 654 YEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGS------QGDAEPCCVCQEEYND 707
YEELLALEE++G V+T L+EE ++K LK Y S + D C +CQEEY D
Sbjct: 418 YEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSICQEEYVD 477
Query: 708 GDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTG 742
GD++G+L C H YH C +QWL KN CPICKT+
Sbjct: 478 GDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSA 512
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 89/128 (69%), Gaps = 7/128 (5%)
Query: 622 EDVMILDQSMFA-GIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLL 680
E + ++ ++F+ G+ +D+HRDMRLD+DNMSYEELLAL +++G V+T L+EE + + L
Sbjct: 392 EQLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSL 451
Query: 681 KQKKY--SAEPGS----QGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNL 734
KQ Y + E GS + D C +CQEEY DGD++G++ C H YH C++QWL KN
Sbjct: 452 KQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNW 511
Query: 735 CPICKTTG 742
CPICKT+
Sbjct: 512 CPICKTSA 519
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 89/128 (69%), Gaps = 7/128 (5%)
Query: 622 EDVMILDQSMFA-GIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLL 680
E + ++ ++F+ G+ +D+HRDMRLD+DNMSYEELLAL +++G V+T L+EE + + L
Sbjct: 392 EQLASIETNLFSSGMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEALSRSL 451
Query: 681 KQKKY--SAEPGS----QGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNL 734
KQ Y + E GS + D C +CQEEY DGD++G++ C H YH C++QWL KN
Sbjct: 452 KQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNW 511
Query: 735 CPICKTTG 742
CPICKT+
Sbjct: 512 CPICKTSA 519
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
Query: 622 EDVMILDQSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLK 681
E +M+ + + G+ + D+ RDMRL+VDNM+YE+LL L ERIG+VNTGLTE+ I L+
Sbjct: 244 EMMMMQNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGERIGHVNTGLTEKQIKSCLR 303
Query: 682 QKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTT 741
+ K + + D + C +CQ+EY D++G L CGH +H C+ QWL+ KN CP+CKT
Sbjct: 304 KVKPCRQDTTVADRK-CIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKTM 362
Query: 742 GLAK 745
K
Sbjct: 363 AYNK 366
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 87/134 (64%), Gaps = 11/134 (8%)
Query: 622 EDVMILDQSMF-AGIANIH-DRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKL 679
++V +L+ F G N H D HRDMRLD++ MSYEELLAL ERIG VNTGL EE +
Sbjct: 355 DEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNH 414
Query: 680 LKQK--------KYSAEPGSQG-DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLM 730
LK + K S+ P ++ + EPC +CQE + + + I +L+CGH YH C+++WL+
Sbjct: 415 LKTRTCSGINFEKESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLI 474
Query: 731 HKNLCPICKTTGLA 744
KN+CPICK+ L
Sbjct: 475 VKNVCPICKSEALV 488
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 87/134 (64%), Gaps = 11/134 (8%)
Query: 622 EDVMILDQSMF-AGIANIH-DRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKL 679
++V +L+ F G N H D HRDMRLD++ MSYEELLAL ERIG VNTGL EE +
Sbjct: 355 DEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNH 414
Query: 680 LKQK--------KYSAEPGSQG-DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLM 730
LK + K S+ P ++ + EPC +CQE + + + I +L+CGH YH C+++WL+
Sbjct: 415 LKTRTCSGINFEKESSSPRTKDLETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLI 474
Query: 731 HKNLCPICKTTGLA 744
KN+CPICK+ L
Sbjct: 475 VKNVCPICKSEALV 488
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 632 FAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQK---KYSAE 688
F N D H+DMRLD+++MSYEELLAL ++IG V TGL+ E + +LLK++ + + E
Sbjct: 357 FYNAVNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLE 416
Query: 689 PGSQGDAEP--CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGLA 744
G D E C +CQE Y + D I +L+C H YH C+K+WL+ KN+CPICK+ L
Sbjct: 417 EGPSTDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALV 474
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 632 FAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQK---KYSAE 688
F N D H+DMRLD+++MSYEELLAL ++IG V TGL+ E + +LLK++ + + E
Sbjct: 357 FYNAVNYVDHHQDMRLDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLE 416
Query: 689 PGSQGDAEP--CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGLA 744
G D E C +CQE Y + D I +L+C H YH C+K+WL+ KN+CPICK+ L
Sbjct: 417 EGPSTDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEALV 474
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 625 MILDQSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKK 684
M+ + + I + D + ++RLDVD+MSYE+LL L +RIG VNTGL E I + L + K
Sbjct: 249 MLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLELGDRIGYVNTGLKESEIHRCLGKIK 308
Query: 685 YSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTGLA 744
S C +CQ+EY D++G LNCGH +H C+KQWL KN CP+CK
Sbjct: 309 PSVSHTLVD--RKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKKAAYG 366
Query: 745 K 745
K
Sbjct: 367 K 367
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 622 EDVMILD-QSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLL 680
E+ M+ D Q + G N+ D HRDMRLD+DNMSYEELL L ERIG+VNTGL++ I L
Sbjct: 416 EEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCL 475
Query: 681 KQKKYSAEPGSQGDAE-PCCVCQEEYNDGDDIGSLN-CGHFYHTGCIKQWLMHKNLCPIC 738
Y P Q + + C +C EEY + +++G + CGH YH CIK+WL KN CPIC
Sbjct: 476 LATMY--YPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 533
Query: 739 KTTGL 743
K+ L
Sbjct: 534 KSPAL 538
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 622 EDVMILD-QSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLL 680
E+ M+ D Q + G N+ D HRDMRLD+DNMSYEELL L ERIG+VNTGL++ I L
Sbjct: 416 EEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCL 475
Query: 681 KQKKYSAEPGSQGDAE-PCCVCQEEYNDGDDIGSLN-CGHFYHTGCIKQWLMHKNLCPIC 738
Y P Q + + C +C EEY + +++G + CGH YH CIK+WL KN CPIC
Sbjct: 476 LATMY--YPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 533
Query: 739 KTTGL 743
K+ L
Sbjct: 534 KSPAL 538
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 622 EDVMILD-QSMFAGIANIHDRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLL 680
E+ M+ D Q + G N+ D HRDMRLD+DNMSYEELL L ERIG+VNTGL++ I L
Sbjct: 469 EEFMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCL 528
Query: 681 KQKKYSAEPGSQGDAE-PCCVCQEEYNDGDDIGSLN-CGHFYHTGCIKQWLMHKNLCPIC 738
Y P Q + + C +C EEY + +++G + CGH YH CIK+WL KN CPIC
Sbjct: 529 LATMY--YPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 586
Query: 739 KTTGL 743
K+ L
Sbjct: 587 KSPAL 591
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 650 DNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGD 709
D +YEELL++ + G+ TGL+EE I + L ++KY E S + + C +CQ++ D +
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDENLIRRKY--EKRSDDETKRCVICQQKLKDNE 238
Query: 710 DIGSLNCGHFYHTGCIKQWLMHKNLCPIC 738
++ L CGH +H GCIK WLM N CP+C
Sbjct: 239 EVSKLGCGHDFHFGCIKNWLMVTNKCPLC 267
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 646 RLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEY 705
+D D +SYEELLAL + +G + GL+ +TI L K+Y G E C +C+ +Y
Sbjct: 237 EMDPDELSYEELLALGDIVGTESRGLSADTIASL-PSKRYKEGDNQNGTNESCVICRLDY 295
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPIC 738
D +D+ L C H YH+ CI WL +CP+C
Sbjct: 296 EDDEDLILLPCKHSYHSECINNWLKINKVCPVC 328
>AT1G36950.1 | Symbols: | RING/U-box superfamily protein |
chr1:14009673-14010822 REVERSE LENGTH=226
Length = 226
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 640 DRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCC 699
D ++++R+D D+M+YE+LL L +G N+ + I + + K S E S D + CC
Sbjct: 24 DPYQELRMDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRNTKPS-EFQSLAD-KICC 81
Query: 700 VCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKTTG 742
+CQ+ + +G LNCGH +H +K W++ K CP+C+ T
Sbjct: 82 ICQDRFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPVCQKTA 124
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 648 DVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQ----------GDAEP 697
D +NM+YEEL L + +G+V GL++E I +L + KY + S D
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRL-RTHKYGTKTKSWYCLHMKKKFVADDSQ 233
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C +C EY GD I +L C H YH CI QWL +C ICK
Sbjct: 234 CSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICK 275
>AT4G00070.1 | Symbols: | RING/U-box superfamily protein |
chr4:29672-31426 REVERSE LENGTH=179
Length = 179
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 640 DRHRDMRLDVDNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCC 699
D ++++R+D D+M+YE+LL L +G N+G+ I + L+ K S E S D + CC
Sbjct: 88 DPYQELRMDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRNTKPS-EFQSLAD-KICC 145
Query: 700 VCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHK 732
+CQ+ + +G LNCGH +H C+K W++ K
Sbjct: 146 ICQDGFQKRAGVGKLNCGHNFHVNCVKPWILTK 178
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 647 LDVDNMSYEELLALEERIGNVNTGLTEETIMKL-LKQKKYSAEPGSQGDAEPCCVCQEEY 705
+D D M+YEEL+ L E +G + GL++E I L K+ K+ + + E C +CQ +Y
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKY 204
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPIC 738
G+ +L C H YH+ CI +WL +CP+C
Sbjct: 205 KIGERQMNLPCKHVYHSECISKWLSINKVCPVC 237
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 647 LDVDNMSYEELLALEERIGNVNTGLTEETIMKL-LKQKKYSAEPGSQGDAEPCCVCQEEY 705
+D D M+YEEL+ L E +G + GL++E I L K+ K+ + + E C +CQ +Y
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKY 204
Query: 706 NDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPIC 738
G+ +L C H YH+ CI +WL +CP+C
Sbjct: 205 KIGERQMNLPCKHVYHSECISKWLSINKVCPVC 237
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 650 DNMSYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGD 709
D +SYEEL+AL + IG N GLT I L Y ++ + + C VCQ E+ + +
Sbjct: 115 DQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVF-SHNKNEIDRCVVCQMEFEERE 173
Query: 710 DIGSLN-CGHFYHTGCIKQWLMHKNLCPIC 738
+ L C H YH+ CI +WL K +CPIC
Sbjct: 174 SLVVLRPCDHPYHSECITKWLETKKICPIC 203
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 676 IMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLC 735
++ L +K Y+ + S DA C +C EE+ G+ + +L CGH + GCI +W + ++C
Sbjct: 136 VVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWFLKDHVC 195
Query: 736 PICK 739
P+C+
Sbjct: 196 PLCR 199
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 677 MKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDG---DDIGSLNCGHFYHTGCIKQWLMHKN 733
M LL + K + + EPC +C E G D+ + C H +H GC+ +WL KN
Sbjct: 136 MVLLGRMKAEEFKSLKMETEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKN 195
Query: 734 LCPICKT 740
CP+C+T
Sbjct: 196 TCPLCRT 202
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 677 MKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGD---DIGSLNCGHFYHTGCIKQWLMHKN 733
M LL + K + + EPC +C E G DI + C H +H GC+ +WL KN
Sbjct: 1 MVLLGRIKTEELKSLKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKN 60
Query: 734 LCPICKT 740
CP+C+T
Sbjct: 61 TCPLCRT 67
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 692 QGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
Q DAE CC+C Y DG ++ L CGH +H C+ +WL CP+CK
Sbjct: 348 QEDAE-CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 394
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 680 LKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
L +K Y G + + C +C EE++DG I +L CGH + C+ +W + ++CP+C+
Sbjct: 259 LNRKTYKKASGVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLCR 318
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWL-MHKNLCPICK 739
CC+C E Y GD + L C H +H C+ WL K+ CP+CK
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCK 276
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 692 QGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
Q DAE CC+C Y DG ++ L CGH +H C+ +WL CP+CK
Sbjct: 277 QEDAE-CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 323
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 685 YSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
++ + G+ E C +C+EE ++G D+ + C HF+H CI WL KN CP C+
Sbjct: 202 FNVAASNAGEVE-CVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCR 255
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 650 DNMSYEELL----ALEERIGNVNTGLTEETIMKLLK--QKKYSAEPGSQGDAEPCCVCQE 703
+ +S+EEL AL++R G L ++ +K QK +P C VCQ+
Sbjct: 74 EQLSFEELFNRLPALQDRRGPPPASLAAINSLQKIKIRQKHLGLDPY-------CPVCQD 126
Query: 704 EYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
++ G D + C H YH+ CI WL+ +N CP+C+
Sbjct: 127 QFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCR 162
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 24/46 (52%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
D C VC EE+ G D L C H YH CI WL N CPIC+
Sbjct: 220 DMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICR 265
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
D CC+C +Y D +++ L C H +H+ C+ QWL + CP+CK
Sbjct: 293 DDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
D CC+C +Y D +++ L C H +H+ C+ QWL + CP+CK
Sbjct: 293 DDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCK 338
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
DAE CC+C EY DG ++ L C H +H CI +WL + CP+CK
Sbjct: 335 DAE-CCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
DA+ CC+C Y DG ++ SL C H +H+ CI +WL CP+CK
Sbjct: 289 DAD-CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCK 333
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
DAE CC+C Y D ++ L CGH +H GC+ +WL CP+CK
Sbjct: 322 DAE-CCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C VC +E+ DG D+ + C H +H C+ WL N CP+C+
Sbjct: 216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
DA+ CC+C Y DG ++ +L C H +H+ CI +WL + CP+CK
Sbjct: 304 DAD-CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCK 348
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 691 SQGDAEP-CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
SQ + +P CC+C +Y + +++ L C H +H C+ QWL + CP+CK
Sbjct: 281 SQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCK 330
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 691 SQGDAEP-CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
SQ + +P CC+C +Y + +++ L C H +H C+ QWL + CP+CK
Sbjct: 281 SQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCK 330
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 688 EPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICKT 740
E G+ CC+C +Y + +++ L C HF+H C+ +WL CP+CK+
Sbjct: 353 ERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKS 405
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 676 IMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWL--MHKN 733
++ LL K Y+ D C +C EY + D I +L C H +H C+ +WL +H
Sbjct: 470 VVDLLPIKLYTKSQSE--DPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSR 527
Query: 734 LCPICK 739
+CP+C+
Sbjct: 528 VCPLCR 533
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 668 NTGLTEETIMKLLKQKKYSAEPGS-----QGDAEPCCVCQEEYNDGDDIGSLN-CGHFYH 721
N GL ++ + L + +AE S +GD+ C +C ++ DG++I L CGH +H
Sbjct: 67 NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFH 126
Query: 722 TGCIKQWLMHKNLCPICK 739
CI +WL+ ++ CP C+
Sbjct: 127 VECIDKWLVSRSSCPSCR 144
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 693 GDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
G+ CC+C Y D + + L C H +H C+ +WL CP+CK
Sbjct: 350 GEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 696 EPCCVCQEEYNDGDDIGSL-NCGHFYHTGCIKQWLM-HKNLCPICKT 740
E C +CQ+E++ GD++ L NC H YH CI +W+ K CP+C+T
Sbjct: 69 ESCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMTCPLCRT 115
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 13/69 (18%)
Query: 671 LTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLM 730
TEE + KK+ AE AE CC+C+E GD + L C H +H C+K WL
Sbjct: 216 FTEELL------KKFGAE------AE-CCICKENLVIGDKMQELPCKHTFHPPCLKPWLD 262
Query: 731 HKNLCPICK 739
N CPIC+
Sbjct: 263 EHNSCPICR 271
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 667 VNTGLTEETI-----MKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSL-NCGHFY 720
VN GL E I K K+ + E +++ C VC E+ + + + + NC H +
Sbjct: 98 VNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVF 157
Query: 721 HTGCIKQWLMHKNLCPICKTT 741
H CI WL CP+C+T+
Sbjct: 158 HIDCIDIWLQGNANCPLCRTS 178
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
DA C VC+EE G ++ L C H YH+ CI WL +N CP+C+
Sbjct: 368 DAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCR 413
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 670 GLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWL 729
GLT++ I L +Q SAE S+ C +C E + GD + SL C H +H+ C+ WL
Sbjct: 177 GLTQDAINCLHRQTFSSAEVKSE--MRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWL 234
Query: 730 MHKNLCPICK 739
CP C+
Sbjct: 235 RACGDCPCCR 244
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 655 EELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSL 714
E + A E N++ + ++ L +K Y S E C +C EE+NDG + +L
Sbjct: 135 EAVRASLEETNNISLRPANKLVVNSLARKIYKKTTSS---TERCTICLEEFNDGTKVMTL 191
Query: 715 NCGHFYHTGCIKQWLMHKNLCPICK 739
CGH + C+ W + CP+C+
Sbjct: 192 PCGHEFDDECVLTWFETNHDCPLCR 216
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 679 LLKQKKYSAEPGSQGDAEPCCVCQEEYNDG---DDIGSLNCGHFYHTGCIKQWLMHKNLC 735
LL + K + + E C +C E G D+ + C H +H C+ +W M KN C
Sbjct: 134 LLGRIKAEELKSLKMETESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTC 193
Query: 736 PICKT 740
P+C+T
Sbjct: 194 PLCRT 198
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C +C+EE+ G++ L C H YH+ CI WL N CPIC+
Sbjct: 138 CAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICR 179
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 680 LKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
L +K Y G+ E C +C EE++DG I +L CGH + C +W + CP+C+
Sbjct: 226 LNRKTYKKASDVVGENEMCSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHDCPLCR 285
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 655 EELLALEERIGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSL 714
E + + +I N + ++K L +K Y S G E C +C EE+++G + +L
Sbjct: 18 EGTITVNAKIDGYNPTPASKLVVKSLARKIYKMTTSSTG--EMCIICLEEFSEGRRVVTL 75
Query: 715 NCGHFYHTGCIKQWLMHKNLCPICK 739
CGH + C+ +W + CP+C+
Sbjct: 76 PCGHDFDDECVLKWFETNHSCPLCR 100
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 698 CCVCQEEYNDGDDIGSL-NCGHFYHTGCIKQWLMHKNLCPICKTT 741
C +C EEY D I L NCGH +H CI WL K CP C+ +
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRS 124
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 623 DVMILDQSMFAGIANIHDRHRDMRLDVDN----MSYEELLALEERIGNVNTGLTEETIMK 678
+V++L + GI H +R M E + L G+ N G+ ++ ++
Sbjct: 58 NVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKA-LR 116
Query: 679 LLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSL-NCGHFYHTGCIKQWLMHKNLCPI 737
+ YS E G E C +C ++ G+ I L C H +H CI +WL CP
Sbjct: 117 MFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPK 176
Query: 738 CK 739
C+
Sbjct: 177 CR 178
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C VC++E+ G + + C H YH+ CI WL+ N CP+C+
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C VC++E+ G + + C H YH+ CI WL+ N CP+C+
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C VC++E+ G + + C H YH+ CI WL+ N CP+C+
Sbjct: 190 CPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 684 KYSAEPGSQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
+++AE + C +C+EE + + L C H+YH CI WL ++N CP+C+
Sbjct: 83 EFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCR 138
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 694 DAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
D C VC E+ G+ + +L C H +H GCI WL + CP+CK
Sbjct: 207 DELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCK 252
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 692 QGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNL-CPICKT 740
Q D E C VC ++ +I L CGH +H C+++W+ + N+ CP+C+T
Sbjct: 98 QADNE-CSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 692 QGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNL-CPICKT 740
Q D E C VC ++ +I L CGH +H C+++W+ + N+ CP+C+T
Sbjct: 98 QADNE-CSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 664 IGNVNTGLTEETIMKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSL-NCGHFYHT 722
+ N GL ++ + L K P S+ AE C +C E++ GD++ L CGH +H
Sbjct: 78 VAAANKGLKKKVLQSLPKLTFSPESPESEKFAE-CAICLAEFSAGDELRVLPQCGHGFHV 136
Query: 723 GCIKQWLMHKNLCPICK 739
CI WL + CP C+
Sbjct: 137 ACIDTWLGSHSSCPSCR 153
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 677 MKLLKQKKYSAEPGSQGDAEPCCVCQEEYNDGDDIGSL-NCGHFYHTGCIKQWLMHKNLC 735
+K L Q KY EP S+ + C VC + + G L CGH +H C+ WL+ + C
Sbjct: 95 VKRLPQFKY-CEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTC 153
Query: 736 PICK 739
PIC+
Sbjct: 154 PICR 157
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 653 SYEELLALEERIGNVNTGLTEETIMKLLKQKKYSAEP-GSQGDAEPCCVCQEEYNDGDDI 711
++EEL ++ + G+ GLT + + K+ K K + G+ + C VC +++ G+ +
Sbjct: 147 TFEELSSIFDTGGS--KGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETV 204
Query: 712 GSL-NCGHFYHTGCIKQWLMHKNLCPICK 739
SL +C H +H CI WL CP+C+
Sbjct: 205 RSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 694 DAEPCCVCQEEYNDGDDIGSL-NCGHFYHTGCIKQWLMHKN--LCPICKT 740
++E C VC ++ + D+I L NC H +H GC+ +W+M N CP+C+T
Sbjct: 85 ESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLCRT 134
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 698 CCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNLCPICK 739
C VC++E N G+ L C H YH+ CI WL +N CP+C+
Sbjct: 309 CAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCR 350
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 689 PGSQGDAEPCCVCQEEYNDGDDIGSL-NCGHFYHTGCIKQWLMHKN--LCPICKT 740
PG ++ C VC E+ + D+I L NC H +H C+ +W+M N CP+C+T
Sbjct: 96 PGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCRT 150
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 691 SQGDAEPCCVCQEEYNDGDDIGSLNCGHFYHTGCIKQWLMHKNL-CPICKT 740
S A C VC + G+++ L+C H +H C++ WL H N CP+C++
Sbjct: 67 SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 117