Miyakogusa Predicted Gene

Lj0g3v0173849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0173849.1 tr|A9RXL8|A9RXL8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_179181,75.47,9e-19,ARM repeat,Armadillo-type fold;
B56,Protein phosphatase 2A, regulatory B subunit, B56;
SERINE/THREON,CUFF.10913.1
         (71 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13460.2 | Symbols:  | Protein phosphatase 2A regulatory B su...    97   2e-21
AT1G13460.1 | Symbols:  | Protein phosphatase 2A regulatory B su...    97   2e-21
AT3G26020.3 | Symbols:  | Protein phosphatase 2A regulatory B su...    94   1e-20
AT3G26020.4 | Symbols:  | Protein phosphatase 2A regulatory B su...    92   8e-20
AT3G26020.2 | Symbols:  | Protein phosphatase 2A regulatory B su...    91   1e-19
AT3G26020.1 | Symbols:  | Protein phosphatase 2A regulatory B su...    91   1e-19
AT4G15415.1 | Symbols: ATB' GAMMA | Protein phosphatase 2A regul...    86   4e-18
AT4G15415.2 | Symbols: ATB' GAMMA | Protein phosphatase 2A regul...    86   4e-18
AT3G21650.1 | Symbols:  | Protein phosphatase 2A regulatory B su...    86   7e-18
AT3G09880.1 | Symbols: ATB' BETA | Protein phosphatase 2A regula...    86   7e-18
AT5G03470.1 | Symbols: ATB' ALPHA | Protein phosphatase 2A regul...    80   2e-16
AT3G26030.1 | Symbols: ATB' DELTA | serine/threonine protein pho...    79   6e-16
AT3G54930.1 | Symbols:  | Protein phosphatase 2A regulatory B su...    76   4e-15
AT5G25510.1 | Symbols:  | Protein phosphatase 2A regulatory B su...    75   1e-14

>AT1G13460.2 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr1:4616504-4618180 FORWARD
           LENGTH=492
          Length = 492

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNNDHI NLI QNRKVIL IIFPALE+NT+ HWNQAVHSLTLNVQKIF D
Sbjct: 392 RALFLWNNDHIENLIMQNRKVILPIIFPALERNTQKHWNQAVHSLTLNVQKIFND 446


>AT1G13460.1 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr1:4616504-4618180 FORWARD
           LENGTH=492
          Length = 492

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNNDHI NLI QNRKVIL IIFPALE+NT+ HWNQAVHSLTLNVQKIF D
Sbjct: 392 RALFLWNNDHIENLIMQNRKVILPIIFPALERNTQKHWNQAVHSLTLNVQKIFND 446


>AT3G26020.3 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr3:9514363-9516585 FORWARD
           LENGTH=512
          Length = 512

 Score = 94.4 bits (233), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/55 (76%), Positives = 48/55 (87%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNN+HI NLI QNRKVIL IIFPALE+N + HWNQAVHSLTLNV+KIF D
Sbjct: 415 RALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSLTLNVRKIFHD 469


>AT3G26020.4 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr3:9514363-9516585 FORWARD
           LENGTH=529
          Length = 529

 Score = 91.7 bits (226), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 48/55 (87%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNN+HI NLI QNRKVIL IIFPALE+N + HWNQAVHSLTLNV+KIF D
Sbjct: 432 RALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSLTLNVRKIFHD 486


>AT3G26020.2 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr3:9514363-9516585 FORWARD
           LENGTH=510
          Length = 510

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 48/55 (87%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNN+HI NLI QNRKVIL IIFPALE+N + HWNQAVHSLTLNV+KIF D
Sbjct: 413 RALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSLTLNVRKIFHD 467


>AT3G26020.1 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr3:9514363-9516585 FORWARD
           LENGTH=510
          Length = 510

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 48/55 (87%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNN+HI NLI QNRKVIL IIFPALE+N + HWNQAVHSLTLNV+KIF D
Sbjct: 413 RALFLWNNNHIENLIMQNRKVILPIIFPALERNAQKHWNQAVHSLTLNVRKIFHD 467


>AT4G15415.1 | Symbols: ATB' GAMMA | Protein phosphatase 2A
           regulatory B subunit family protein |
           chr4:8817707-8819349 FORWARD LENGTH=522
          Length = 522

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 46/55 (83%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNNDHI NLI QN KVI+ I+FPA+E+NTR HWNQAV SLTLNV+K+  +
Sbjct: 401 RALFLWNNDHIRNLITQNHKVIMPIVFPAMERNTRGHWNQAVQSLTLNVRKVMAE 455


>AT4G15415.2 | Symbols: ATB' GAMMA | Protein phosphatase 2A
           regulatory B subunit family protein |
           chr4:8817707-8819349 FORWARD LENGTH=522
          Length = 522

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 46/55 (83%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNNDHI NLI QN KVI+ I+FPA+E+NTR HWNQAV SLTLNV+K+  +
Sbjct: 401 RALFLWNNDHIRNLITQNHKVIMPIVFPAMERNTRGHWNQAVQSLTLNVRKVMAE 455


>AT3G21650.1 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr3:7621680-7623412 REVERSE
           LENGTH=546
          Length = 546

 Score = 85.5 bits (210), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 45/53 (84%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
           + +FLWNNDHI NLI QN KVI+ I+FPALE+NTR HWNQAV SLT+NV+K+ 
Sbjct: 422 RALFLWNNDHIRNLITQNHKVIMPIVFPALERNTRGHWNQAVQSLTINVRKVL 474


>AT3G09880.1 | Symbols: ATB' BETA | Protein phosphatase 2A
           regulatory B subunit family protein |
           chr3:3029902-3031931 FORWARD LENGTH=499
          Length = 499

 Score = 85.5 bits (210), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 45/55 (81%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNN+HIV LI QNR VIL II+P LEKN +SHWNQAVH LT N++K+F +
Sbjct: 391 RALFLWNNEHIVGLIAQNRSVILPIIYPTLEKNIQSHWNQAVHGLTTNIKKMFME 445


>AT5G03470.1 | Symbols: ATB' ALPHA | Protein phosphatase 2A
           regulatory B subunit family protein | chr5:866795-868872
           FORWARD LENGTH=495
          Length = 495

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/55 (60%), Positives = 44/55 (80%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNN+H+V LI QNR VIL IIF +LEKN  SHWNQAVH L+ N++++F +
Sbjct: 391 RALFLWNNEHVVGLIAQNRGVILPIIFASLEKNIESHWNQAVHGLSANIKRMFME 445


>AT3G26030.1 | Symbols: ATB' DELTA | serine/threonine protein
           phosphatase 2A 55 kDa regulatory subunit B prime delta |
           chr3:9517741-9519260 FORWARD LENGTH=477
          Length = 477

 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 44/55 (80%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + ++LWNNDH+ NL++QN ++IL I+FPALEKN  SHWNQAV +LT NV K+  D
Sbjct: 380 RALYLWNNDHVTNLVRQNSRIILPIVFPALEKNGSSHWNQAVKNLTENVLKVLSD 434


>AT3G54930.1 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr3:20351084-20352659 REVERSE
           LENGTH=497
          Length = 497

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/53 (60%), Positives = 42/53 (79%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
           + +FLWNN+HIV LI QN+ VI  IIF ALE+N + HWNQAVH L+ NV+++F
Sbjct: 400 RALFLWNNEHIVGLIAQNKDVIFPIIFEALERNMKGHWNQAVHGLSENVRRMF 452


>AT5G25510.1 | Symbols:  | Protein phosphatase 2A regulatory B
           subunit family protein | chr5:8882728-8884325 REVERSE
           LENGTH=500
          Length = 500

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 44/53 (83%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
           + +FLWNND IVNLI  NR+ IL I+F ALEKN ++HWNQ+V +LTLNV+K+F
Sbjct: 386 RALFLWNNDQIVNLIGHNRQAILPIMFTALEKNAQNHWNQSVLNLTLNVRKMF 438