Miyakogusa Predicted Gene
- Lj0g3v0173129.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0173129.1 tr|F4K4D6|F4K4D6_ARATH PWWP domain-containing
protein OS=Arabidopsis thaliana GN=At5g27650 PE=4
SV=1,32.02,2e-17,PWWP,PWWP; domain with conserved PWWP motif,PWWP; no
description,NULL; Tudor/PWWP/MBT,NULL; seg,NULL,CUFF.10874.1
(755 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 223 4e-58
AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 223 4e-58
AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 207 2e-53
AT3G54760.2 | Symbols: | dentin sialophosphoprotein-related | c... 147 2e-35
AT3G54760.1 | Symbols: | dentin sialophosphoprotein-related | c... 147 2e-35
AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 141 2e-33
AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 107 3e-23
AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 103 4e-22
AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 97 6e-20
AT3G48190.1 | Symbols: ATM, ATATM | ataxia-telangiectasia mutate... 74 4e-13
>AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 211/383 (55%), Gaps = 46/383 (12%)
Query: 181 MVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTFAWNEASQLKPFRTHF 240
+VW KVRSHPWWPGQ+FD S A+ A KHFKKGS+LV Y+GD TFAWNEAS++KPFR HF
Sbjct: 202 LVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIKPFRQHF 261
Query: 241 SSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQVVENVGIREELSV 300
S + +S+ F A+D A+EEV+RR+EFGLACSCI ++ Y KIK Q V N GIRE+ S
Sbjct: 262 SQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGIREDSSS 321
Query: 301 ANIVDESLNISSFSPEKLIEYLKTLSELPT-GGFDRLELSIAKAQLLAFYRLKGYSYLPQ 359
+ D+ + F P L+ Y+K L+ P+ D L+L +AQLLAF R KGY+ LP+
Sbjct: 322 IHGGDKVSSAVFFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNRWKGYTDLPE 381
Query: 360 -LQYCGGLEN--------DIDNLVDDADKNRSEVHELATHVSKNDGQSGTGNL----KTE 406
+ G +E+ + +LV+ +D ++ ++ T K + Q+ +L +
Sbjct: 382 FMTLQGSVESAPKISPAEEQSSLVEVSDPEPTKSKQVYTKRRKTNLQTEQSSLVEVSDPD 441
Query: 407 NGSCNKHKHN----LKDVVYTRKK----------KRFSEPVGGTSDSTDGDIWSNEVTDV 452
G C KH+ ++ + +KK KR S G TS G++ E
Sbjct: 442 KGDC---KHDGVFEYEETIVPKKKEKTLAEFIAEKRVSRHNGNTSHEKSGNVPHCEKKRK 498
Query: 453 LITPSLSKKRKTI----------VDVSGK-DRSKSVSLAK--VSNTAKQSFKIGDCIRRV 499
++ + K K I VS K DR ++S A++SF IG I +V
Sbjct: 499 VVQSKVPKSTKKIKANLQTEDPGSPVSPKNDRKNNLSAGDKITPQKARKSFGIGASILKV 558
Query: 500 ASQL--TGPSSMLKCSGAKSQIA 520
A+Q+ + P+ +L CS + S+ A
Sbjct: 559 ANQMHCSTPTRLLPCSDSTSKKA 581
>AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 211/383 (55%), Gaps = 46/383 (12%)
Query: 181 MVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTFAWNEASQLKPFRTHF 240
+VW KVRSHPWWPGQ+FD S A+ A KHFKKGS+LV Y+GD TFAWNEAS++KPFR HF
Sbjct: 202 LVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIKPFRQHF 261
Query: 241 SSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQVVENVGIREELSV 300
S + +S+ F A+D A+EEV+RR+EFGLACSCI ++ Y KIK Q V N GIRE+ S
Sbjct: 262 SQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGIREDSSS 321
Query: 301 ANIVDESLNISSFSPEKLIEYLKTLSELPT-GGFDRLELSIAKAQLLAFYRLKGYSYLPQ 359
+ D+ + F P L+ Y+K L+ P+ D L+L +AQLLAF R KGY+ LP+
Sbjct: 322 IHGGDKVSSAVFFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNRWKGYTDLPE 381
Query: 360 -LQYCGGLEN--------DIDNLVDDADKNRSEVHELATHVSKNDGQSGTGNL----KTE 406
+ G +E+ + +LV+ +D ++ ++ T K + Q+ +L +
Sbjct: 382 FMTLQGSVESAPKISPAEEQSSLVEVSDPEPTKSKQVYTKRRKTNLQTEQSSLVEVSDPD 441
Query: 407 NGSCNKHKHN----LKDVVYTRKK----------KRFSEPVGGTSDSTDGDIWSNEVTDV 452
G C KH+ ++ + +KK KR S G TS G++ E
Sbjct: 442 KGDC---KHDGVFEYEETIVPKKKEKTLAEFIAEKRVSRHNGNTSHEKSGNVPHCEKKRK 498
Query: 453 LITPSLSKKRKTI----------VDVSGK-DRSKSVSLAK--VSNTAKQSFKIGDCIRRV 499
++ + K K I VS K DR ++S A++SF IG I +V
Sbjct: 499 VVQSKVPKSTKKIKANLQTEDPGSPVSPKNDRKNNLSAGDKITPQKARKSFGIGASILKV 558
Query: 500 ASQL--TGPSSMLKCSGAKSQIA 520
A+Q+ + P+ +L CS + S+ A
Sbjct: 559 ANQMHCSTPTRLLPCSDSTSKKA 581
>AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:690953-692851 FORWARD LENGTH=632
Length = 632
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Query: 181 MVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTFAWNEASQLKPFRTHF 240
+VW K+RS+PWWPG +FD S AS AM+HFKKG+ LVAY+GD TFAWN ASQ+KPF +F
Sbjct: 100 LVWAKLRSYPWWPGLVFDKSVASKAAMRHFKKGNVLVAYFGDCTFAWNNASQIKPFHQNF 159
Query: 241 SSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQVVENVGIREELSV 300
S ++ +SNS FR A+DCA++EV+RRVEFGL+CSC+ ++ Y+K+K Q + N GIRE+ SV
Sbjct: 160 SQMQEQSNSAEFRDAIDCALDEVSRRVEFGLSCSCVSEEAYNKLKTQNIINAGIREDSSV 219
Query: 301 ANIVDESLNISSFSPEKLIEYLKTLSELPT-GGFDRLELSIAKAQLLAFYRLKGYSYL 357
D+ + SF P KL++Y+K L+ P ++L+ I +AQ+LAF + K YS+
Sbjct: 220 RYGGDKLSDGISFEPAKLVDYMKHLACFPCYDATEKLQFVINRAQVLAFQQWKDYSHF 277
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 669 DEESPAELVSSFSELDSVPSETSLSKIFRHFGPLKESETEIDRESSRARVVFKKRADAEV 728
D P LV +F++ SVPSE L++IF+ +GPL ES+T++ + RA+VVFK+ DA+
Sbjct: 542 DSLPPYALVLNFADSGSVPSEEKLNEIFKRYGPLHESKTKVTMKGKRAKVVFKRGEDAKT 601
Query: 729 AFSSAKKFNLFGSALVNYQLHYT-PGR 754
AFSSA K+++FG +L++Y+L Y P R
Sbjct: 602 AFSSAGKYSIFGPSLLSYRLEYVCPKR 628
>AT3G54760.2 | Symbols: | dentin sialophosphoprotein-related |
chr3:20269659-20272037 REVERSE LENGTH=761
Length = 761
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 156/320 (48%), Gaps = 75/320 (23%)
Query: 461 KRKTIV---DVSGKDRSKSVSLAKVSNTAKQSFKIGDCIRRVASQLTGPSSMLKCSGAKS 517
KRK V D G+ R K+VS AKVS + SFKIG CI R ASQ+ G S+LK S
Sbjct: 457 KRKADVLSEDSPGEGR-KTVSFAKVSFAERPSFKIGACIARAASQMAGSPSVLKGSN--- 512
Query: 518 QIADEGADDFSGNGTDVFSLNLEEAQKSGLIFHKGCXXXXXXXXXXQWVAHEPQGDYSFL 577
DE +L++E + C A +P +
Sbjct: 513 -FGDE-------------TLSVE-----SFVSQLHC------------AATDPVKENVVS 541
Query: 578 NVIVSFFSDFRNSITVGNDSGKEILPTNEVGTKRKK---GLIGGSPETCKFDDLGDTYLK 634
++ FF DFRNS S + + T +V KR + + G+ E +F+++GDTY
Sbjct: 542 DIATGFFLDFRNS------SASQQVTTEKVSKKRGRPSNSNVAGT-EAFEFEEMGDTYWT 594
Query: 635 DMVI--------------------------QVXXXXXXXXXXXXXXXNHVEDPEKPSGYI 668
D VI QV +KP+ I
Sbjct: 595 DRVIHNGGEGQTPATEKGNYQVVPVELKPAQVQRTRRPYRRRQSQISIPHSATKKPAD-I 653
Query: 669 DEESPAELVSSFSELDSVPSETSLSKIFRHFGPLKESETEIDRESSRARVVFKKRADAEV 728
DE +PAE++ +F E D++P E SLSK+FRHFGP++E TE+DRE +RARVVF+K ADAEV
Sbjct: 654 DENAPAEIIMNFFETDTIPPEKSLSKMFRHFGPIQELRTEVDREKNRARVVFRKGADAEV 713
Query: 729 AFSSAKKFNLFGSALVNYQL 748
A++SA +FN+FG+ +V Y+L
Sbjct: 714 AYNSAGRFNIFGTKVVKYEL 733
>AT3G54760.1 | Symbols: | dentin sialophosphoprotein-related |
chr3:20269659-20272037 REVERSE LENGTH=792
Length = 792
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 156/320 (48%), Gaps = 75/320 (23%)
Query: 461 KRKTIV---DVSGKDRSKSVSLAKVSNTAKQSFKIGDCIRRVASQLTGPSSMLKCSGAKS 517
KRK V D G+ R K+VS AKVS + SFKIG CI R ASQ+ G S+LK S
Sbjct: 488 KRKADVLSEDSPGEGR-KTVSFAKVSFAERPSFKIGACIARAASQMAGSPSVLK----GS 542
Query: 518 QIADEGADDFSGNGTDVFSLNLEEAQKSGLIFHKGCXXXXXXXXXXQWVAHEPQGDYSFL 577
DE +L++E + C A +P +
Sbjct: 543 NFGDE-------------TLSVE-----SFVSQLHC------------AATDPVKENVVS 572
Query: 578 NVIVSFFSDFRNSITVGNDSGKEILPTNEVGTKRKK---GLIGGSPETCKFDDLGDTYLK 634
++ FF DFRNS S + + T +V KR + + G+ E +F+++GDTY
Sbjct: 573 DIATGFFLDFRNS------SASQQVTTEKVSKKRGRPSNSNVAGT-EAFEFEEMGDTYWT 625
Query: 635 DMVI--------------------------QVXXXXXXXXXXXXXXXNHVEDPEKPSGYI 668
D VI QV +KP+ I
Sbjct: 626 DRVIHNGGEGQTPATEKGNYQVVPVELKPAQVQRTRRPYRRRQSQISIPHSATKKPAD-I 684
Query: 669 DEESPAELVSSFSELDSVPSETSLSKIFRHFGPLKESETEIDRESSRARVVFKKRADAEV 728
DE +PAE++ +F E D++P E SLSK+FRHFGP++E TE+DRE +RARVVF+K ADAEV
Sbjct: 685 DENAPAEIIMNFFETDTIPPEKSLSKMFRHFGPIQELRTEVDREKNRARVVFRKGADAEV 744
Query: 729 AFSSAKKFNLFGSALVNYQL 748
A++SA +FN+FG+ +V Y+L
Sbjct: 745 AYNSAGRFNIFGTKVVKYEL 764
>AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:16131654-16134680 REVERSE LENGTH=1008
Length = 1008
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Query: 181 MVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTFAWNEASQLKPFRTHF 240
VWGK+++HPWWPGQI+DPSDAS LA+K +KG LVA +GDGTFAW ASQLKPF F
Sbjct: 130 FVWGKIKNHPWWPGQIYDPSDASDLALKIKQKGKLLVACFGDGTFAWCGASQLKPFAESF 189
Query: 241 SSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQVVENVGIREELSV 300
SNS F AV+ A+EE+ R +E L C C + ++ +V N GI+E + V
Sbjct: 190 KECSKVSNSRSFLGAVEEAVEEIGRHIERVLVCDCAEEKKHE-FDSPLVNNAGIKEGVLV 248
Query: 301 ANIVDESLNISSFSPEKLIEYLKTLSELP-TGGFD-RLELSIAKAQLLAFYRL-KGY 354
++ E ISS K E LK + T F LEL I K ++ AFYR +GY
Sbjct: 249 RDVRREM--ISSLLIGKHGEILKDVKSFAETVSFSGLLELEILKRKVSAFYRSNRGY 303
>AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:1567745-1571037 FORWARD LENGTH=965
Length = 965
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%)
Query: 176 FPLYGMVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTFAWNEASQLKP 235
F + MVWGKV+SHPWWPGQIF+ + AS + K G LVA++GD ++ W + ++L P
Sbjct: 133 FEVGDMVWGKVKSHPWWPGQIFNEAFASPSVRRVKKMGYVLVAFFGDNSYGWFDPAELIP 192
Query: 236 FRTHFSSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQ 287
F H +++SD F AV+ AM EV RR GL C C ++ + I Q
Sbjct: 193 FEPHVKEKSQQTSSDHFAKAVEEAMNEVGRRSALGLTCKCRNQYNFRPINAQ 244
>AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:10326128-10328086 FORWARD LENGTH=652
Length = 652
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 19/207 (9%)
Query: 171 EKEGEFPLYGMVWGK-VRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGT-FAWN 228
E E F + VWG+ S WWPGQI+D DAS LA+K +KG LVAY+GDG+ F W
Sbjct: 56 ELENGFHVGDFVWGEEANSQQWWPGQIYDSLDASDLALKTMQKGKLLVAYFGDGSFFGWC 115
Query: 229 EASQLKPFRTHFSSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKV-Q 287
+LKPF +F S+S F AV+ A+ E+ VE L C D V
Sbjct: 116 NPLELKPFLENFKEFSKMSDSRRFLLAVEDAVREIGEHVEKFLVCD-------DAALVSS 168
Query: 288 VVENVGIREELSVANIVDESLNISSF---SPEKLIEYLKTLSELPTGGFDRLELSIAKAQ 344
V N+GI++ + V ++ + ISS +P ++E +K L+ + D LE+ + + +
Sbjct: 169 VALNLGIKDGVVVPDVRRKI--ISSLVLENPGVVLEDVKRLA-MTVRFDDLLEIEVLRRK 225
Query: 345 LLAFYRLKGYSYLPQL---QYCGGLEN 368
+ AFYR KG L + +Y GLE+
Sbjct: 226 ISAFYRCKGRFDLAKFDEHRYIIGLED 252
>AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:9785511-9789094 FORWARD LENGTH=1072
Length = 1072
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 176 FPLYGMVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTFAWNEASQLKP 235
F + +VWGKV+SHPWWPG IF+ + AS + + LVA++GD ++ W + ++L P
Sbjct: 171 FEVGDLVWGKVKSHPWWPGHIFNEAFASPSVRRMRRIDHVLVAFFGDSSYGWFDPAELIP 230
Query: 236 FRTHFSSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQVVENVGIR 295
F + ++ S F AV+ A +E +RR GL C C + + V+ V +
Sbjct: 231 FEPNLEEKSQQTVSKHFVRAVEEAKDEASRRSALGLTCKCRNPYNFRPSNVEDYFAVDVP 290
Query: 296 E-ELSVANIVDESLNIS-SFSPEKLIEYLKTLSELPT-GGFDRLELSIAKAQLLAFYR 350
+ EL VD+ N F P + I ++K L+ P D L+ KA + AF +
Sbjct: 291 DYELQAVYSVDQIKNSRDKFLPAETISFVKQLALAPQECDPDSLKFMKKKAVVFAFRK 348
>AT3G48190.1 | Symbols: ATM, ATATM | ataxia-telangiectasia mutated |
chr3:17797628-17828361 FORWARD LENGTH=3845
Length = 3845
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 175 EFPLYGMVWGKVRSHPWWPGQIFDPSDASALAMKHFKKGSYLVAYYGDGTF-AWNEASQL 233
EF + +VW + WWPG++ D K K S++V G +W +S+L
Sbjct: 105 EFLVGNLVWVMTKYKKWWPGEVVD--------FKADAKESFMVRSIGQSHLVSWFASSKL 156
Query: 234 KPFRTHFSSIENKSNSDIFRSAVDCAMEEVTRRVEFGLACSCIHKDTYDKIKVQVVENVG 293
KPF+ F + N+ N + F A+ AM ++ ++ + CSCI D + +N+
Sbjct: 157 KPFKESFEQVLNQRNDNGFFDALQKAMSLLSNSLKLDMTCSCIA----DGNGIVSAQNIT 212
Query: 294 IREELSVANIVDESLNISSFSPEKLIEYLKTLSELPTGGFDRLELSIAKAQLLAFYRLKG 353
R+ ++ ++ P++ + LK +++ LE ++ ++QL AFY L G
Sbjct: 213 TRKN---KPLILREFSVDRLEPKEFVTQLKNIAKCVLNA-GVLESTVMQSQLSAFYTLFG 268
Query: 354 YSYLPQLQ 361
+ +P Q
Sbjct: 269 HKQIPMAQ 276
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 676 LVSSFSELDSVPSETSLSKIFRHFGPLKESETEIDRESSRARVVFKKRADAEVAFSSAKK 735
L FS S+PS L+ F FGPL SET + E S A+V F ADA A S +K
Sbjct: 691 LFLKFSSQVSMPSRDDLTSTFSAFGPLDSSETHVSEEFSGAQVAFVSSADAIEAVKSLEK 750
Query: 736 FNLFGSALVNYQLH 749
N FG LVN++L
Sbjct: 751 ANPFGETLVNFRLQ 764