Miyakogusa Predicted Gene

Lj0g3v0172469.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172469.2 tr|D7MMK0|D7MMK0_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683728
PE,71.43,6e-16,coiled-coil,NULL; seg,NULL; TARGETING PROTEIN FOR
XKLP2,NULL; TPX2,Xklp2 targeting protein,CUFF.10841.2
         (211 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03780.2 | Symbols: TPX2 | targeting protein for XKLP2 | chr1...   194   3e-50
AT1G03780.3 | Symbols: TPX2 | targeting protein for XKLP2 | chr1...   194   3e-50
AT1G03780.1 | Symbols: TPX2 | targeting protein for XKLP2 | chr1...   135   1e-32
AT5G44270.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    90   1e-18
AT5G15510.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    59   3e-09
AT3G01015.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    57   1e-08
AT5G15510.2 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    52   2e-07
AT5G37478.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    49   2e-06

>AT1G03780.2 | Symbols: TPX2 | targeting protein for XKLP2 |
           chr1:947785-951696 REVERSE LENGTH=758
          Length = 758

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 122/173 (70%)

Query: 13  ARVPKANPYPYTTDFAVIPPKPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXXXXXX 72
           ARVPKANPYPYTTD+ V+PPKPEPK CT+PEPFQLESLVRH                   
Sbjct: 556 ARVPKANPYPYTTDYPVVPPKPEPKQCTQPEPFQLESLVRHEEEMRREREERRRMETEEA 615

Query: 73  XXXXFKAQPVLKEDPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRY 132
               FKAQPV+KEDPIPVPEKVR PLT++QEF+L + +RAV+RA FD KIKEKE  YKRY
Sbjct: 616 QKRLFKAQPVIKEDPIPVPEKVRMPLTEIQEFNLHVEHRAVERADFDHKIKEKENQYKRY 675

Query: 133 RXXXXXXXXXXXXKALKQLRRTMVPHARPVPKFDHPFCPQKAAKEATKPKSPN 185
           R            +ALKQ+R+TMVPHARPVP F+ PF PQK+ K  TK KSPN
Sbjct: 676 REESEAAKMVEEERALKQMRKTMVPHARPVPNFNKPFLPQKSNKGTTKAKSPN 728


>AT1G03780.3 | Symbols: TPX2 | targeting protein for XKLP2 |
           chr1:947555-951696 REVERSE LENGTH=790
          Length = 790

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 122/173 (70%)

Query: 13  ARVPKANPYPYTTDFAVIPPKPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXXXXXX 72
           ARVPKANPYPYTTD+ V+PPKPEPK CT+PEPFQLESLVRH                   
Sbjct: 556 ARVPKANPYPYTTDYPVVPPKPEPKQCTQPEPFQLESLVRHEEEMRREREERRRMETEEA 615

Query: 73  XXXXFKAQPVLKEDPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRY 132
               FKAQPV+KEDPIPVPEKVR PLT++QEF+L + +RAV+RA FD KIKEKE  YKRY
Sbjct: 616 QKRLFKAQPVIKEDPIPVPEKVRMPLTEIQEFNLHVEHRAVERADFDHKIKEKENQYKRY 675

Query: 133 RXXXXXXXXXXXXKALKQLRRTMVPHARPVPKFDHPFCPQKAAKEATKPKSPN 185
           R            +ALKQ+R+TMVPHARPVP F+ PF PQK+ K  TK KSPN
Sbjct: 676 REESEAAKMVEEERALKQMRKTMVPHARPVPNFNKPFLPQKSNKGTTKAKSPN 728


>AT1G03780.1 | Symbols: TPX2 | targeting protein for XKLP2 |
           chr1:948064-951696 REVERSE LENGTH=687
          Length = 687

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 89/165 (53%), Gaps = 44/165 (26%)

Query: 13  ARVPKANPYPYTTDFAV---------------IPPKPEPKHCTKPEPFQLESLVRHXXXX 57
           ARVPKANPYPYTTD+ V               +PPKPEPK CT+PEPFQLESLVRH    
Sbjct: 508 ARVPKANPYPYTTDYPVKREMVLINLTCSNSQVPPKPEPKQCTQPEPFQLESLVRHEEEM 567

Query: 58  XXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQ 117
                              FKAQPV+KEDPIPVPEKVR PLT++QEF+L + +RAV+RA 
Sbjct: 568 RREREERRRMETEEAQKRLFKAQPVIKEDPIPVPEKVRMPLTEIQEFNLHVEHRAVERAD 627

Query: 118 FDEK-----------------------------IKEKETMYKRYR 133
           FD K                             IKEKE  YKRYR
Sbjct: 628 FDHKVSILFSHFSKQKNASITSEIDESILFWNQIKEKENQYKRYR 672


>AT5G44270.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr5:17833636-17835740 FORWARD
           LENGTH=309
          Length = 309

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 61/99 (61%)

Query: 86  DPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYRXXXXXXXXXXXX 145
           + I V +K++      QEF+L + +R ++RA FD KIKEKE MYKR+             
Sbjct: 190 NQISVLDKLKASYRIFQEFNLHVDHRPIERADFDHKIKEKEMMYKRHLEEAEAAKMVEEE 249

Query: 146 KALKQLRRTMVPHARPVPKFDHPFCPQKAAKEATKPKSP 184
           +ALKQLRRT+VP  RPV   ++PF P K+ KE TKP SP
Sbjct: 250 RALKQLRRTIVPQTRPVSNLNNPFLPHKSNKETTKPNSP 288


>AT5G15510.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr5:5034120-5036614 FORWARD LENGTH=497
          Length = 497

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%)

Query: 96  KPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYRXXXXXXXXXXXXKALKQLRRTM 155
           K +T+  + +L    RAV+RA+FD ++ EK +  ++Y+            + +++LR+ +
Sbjct: 376 KDITRPVDLTLHSDVRAVERAEFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRKEL 435

Query: 156 VPHARPVPKFDHPFCPQKAAKEATKPKSP 184
           VP A+P+P FD PF P++++K  T P+ P
Sbjct: 436 VPKAQPMPYFDRPFIPRRSSKHPTAPRDP 464


>AT3G01015.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr3:1798-4017 REVERSE LENGTH=488
          Length = 488

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 46/74 (62%)

Query: 111 RAVDRAQFDEKIKEKETMYKRYRXXXXXXXXXXXXKALKQLRRTMVPHARPVPKFDHPFC 170
           RAV+RA+FD ++ EK  + ++Y+            + +++LR+ +VP A+P+P FD PF 
Sbjct: 381 RAVERAEFDYQVTEKINLVEQYKTERERQQKLAEEEEIRRLRKELVPKAQPMPYFDRPFI 440

Query: 171 PQKAAKEATKPKSP 184
           P+++ K  T P+ P
Sbjct: 441 PKRSNKHPTVPRDP 454


>AT5G15510.2 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr5:5034120-5036588 FORWARD LENGTH=519
          Length = 519

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 47/78 (60%)

Query: 96  KPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYRXXXXXXXXXXXXKALKQLRRTM 155
           K +T+  + +L    RAV+RA+FD ++ EK +  ++Y+            + +++LR+ +
Sbjct: 376 KDITRPVDLTLHSDVRAVERAEFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRKEL 435

Query: 156 VPHARPVPKFDHPFCPQK 173
           VP A+P+P FD PF P++
Sbjct: 436 VPKAQPMPYFDRPFIPRR 453


>AT5G37478.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr5:14881560-14883799 FORWARD
           LENGTH=178
          Length = 178

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 95  RKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYRXXXXXXXXXXXXKALKQLRRT 154
           +KPL    EF L    RAV RA F+  +     + K  +            + ++ LR+ 
Sbjct: 65  KKPL----EFKLHSGERAVKRAMFNYSVATNYYIQKLQKKQEERLQKMIEEEEIRMLRKE 120

Query: 155 MVPHARPVPKFDHPFCPQKAAKEATKPKSPNXXXXXXXXXXXXFN 199
           MVP A+ +P FD PF PQ++++  T PK P+            FN
Sbjct: 121 MVPKAQLMPFFDRPFLPQRSSRPLTMPKEPSFGNVNSTCWTCVFN 165