Miyakogusa Predicted Gene
- Lj0g3v0172469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0172469.1 Non Chatacterized Hit- tr|D7M0D1|D7M0D1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.99,9e-18,coiled-coil,NULL; seg,NULL; TARGETING PROTEIN FOR
XKLP2,NULL; TPX2_importin,Cell cycle regulated mic,CUFF.10841.1
(341 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03780.3 | Symbols: TPX2 | targeting protein for XKLP2 | chr1... 410 e-115
AT1G03780.2 | Symbols: TPX2 | targeting protein for XKLP2 | chr1... 410 e-115
AT1G03780.1 | Symbols: TPX2 | targeting protein for XKLP2 | chr1... 326 1e-89
AT4G22860.2 | Symbols: | Cell cycle regulated microtubule assoc... 105 6e-23
AT4G22860.1 | Symbols: | Cell cycle regulated microtubule assoc... 105 6e-23
AT4G11990.1 | Symbols: | Cell cycle regulated microtubule assoc... 100 1e-21
AT5G44270.1 | Symbols: | TPX2 (targeting protein for Xklp2) pro... 57 2e-08
>AT1G03780.3 | Symbols: TPX2 | targeting protein for XKLP2 |
chr1:947555-951696 REVERSE LENGTH=790
Length = 790
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/341 (64%), Positives = 255/341 (74%), Gaps = 1/341 (0%)
Query: 1 MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
M+AK+PKFKARP+NKKIL P LP RSTPH PEF+EFHL+T+ARA+Q A+++SIASTE
Sbjct: 346 MLAKIPKFKARPVNKKILAAPALPAPQRSTPHLPEFQEFHLQTMARANQHAETSSIASTE 405
Query: 61 VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
VS + N K HLTEPK+PVLQT LRARP K++ ELEQEELEK PKFKA+PLNKKIFES
Sbjct: 406 VSKQHNDQKHHLTEPKSPVLQTMLRARPTIAKTTAELEQEELEKAPKFKAKPLNKKIFES 465
Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
KG++GIFC+TKKH+T PQEFHFAT+ERI P ++ D+FDKL L SE H P+PR T P
Sbjct: 466 KGEMGIFCNTKKHITIPQEFHFATDERISRPESVLDIFDKLSLNSESCH-EKPLPRNTAP 524
Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAVIPPKPEPKHCTK 240
NPF+L TEERGA ARVPKANPYPYTTD+ V+PPKPEPK CT+
Sbjct: 525 NPFNLKTEERGAEKEKKFYMELMYKKLGDVKARVPKANPYPYTTDYPVVPPKPEPKQCTQ 584
Query: 241 PEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQV 300
PEPFQLESLVRH FKAQPV+KEDPIPVPEKVR PLT++
Sbjct: 585 PEPFQLESLVRHEEEMRREREERRRMETEEAQKRLFKAQPVIKEDPIPVPEKVRMPLTEI 644
Query: 301 QEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
QEF+L + +RAV+RA FD KIKEKE YKRYREESEA +MV
Sbjct: 645 QEFNLHVEHRAVERADFDHKIKEKENQYKRYREESEAAKMV 685
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 65 ENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFESKGDI 124
+N K LT PK P TS RARP ++KSS ELE+E L KIPKFKARP+NKKI + +
Sbjct: 310 QNRPKLTLTRPKEPEFVTSQRARPLRVKSSAELEEEMLAKIPKFKARPVNKKILAAPA-L 368
Query: 125 GIFCHTKKHVTEPQEFHFATNER 147
+ H+ E QEFH T R
Sbjct: 369 PAPQRSTPHLPEFQEFHLQTMAR 391
>AT1G03780.2 | Symbols: TPX2 | targeting protein for XKLP2 |
chr1:947785-951696 REVERSE LENGTH=758
Length = 758
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/341 (64%), Positives = 255/341 (74%), Gaps = 1/341 (0%)
Query: 1 MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
M+AK+PKFKARP+NKKIL P LP RSTPH PEF+EFHL+T+ARA+Q A+++SIASTE
Sbjct: 346 MLAKIPKFKARPVNKKILAAPALPAPQRSTPHLPEFQEFHLQTMARANQHAETSSIASTE 405
Query: 61 VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
VS + N K HLTEPK+PVLQT LRARP K++ ELEQEELEK PKFKA+PLNKKIFES
Sbjct: 406 VSKQHNDQKHHLTEPKSPVLQTMLRARPTIAKTTAELEQEELEKAPKFKAKPLNKKIFES 465
Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
KG++GIFC+TKKH+T PQEFHFAT+ERI P ++ D+FDKL L SE H P+PR T P
Sbjct: 466 KGEMGIFCNTKKHITIPQEFHFATDERISRPESVLDIFDKLSLNSESCH-EKPLPRNTAP 524
Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAVIPPKPEPKHCTK 240
NPF+L TEERGA ARVPKANPYPYTTD+ V+PPKPEPK CT+
Sbjct: 525 NPFNLKTEERGAEKEKKFYMELMYKKLGDVKARVPKANPYPYTTDYPVVPPKPEPKQCTQ 584
Query: 241 PEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQV 300
PEPFQLESLVRH FKAQPV+KEDPIPVPEKVR PLT++
Sbjct: 585 PEPFQLESLVRHEEEMRREREERRRMETEEAQKRLFKAQPVIKEDPIPVPEKVRMPLTEI 644
Query: 301 QEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
QEF+L + +RAV+RA FD KIKEKE YKRYREESEA +MV
Sbjct: 645 QEFNLHVEHRAVERADFDHKIKEKENQYKRYREESEAAKMV 685
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 65 ENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFESKGDI 124
+N K LT PK P TS RARP ++KSS ELE+E L KIPKFKARP+NKKI + +
Sbjct: 310 QNRPKLTLTRPKEPEFVTSQRARPLRVKSSAELEEEMLAKIPKFKARPVNKKILAAPA-L 368
Query: 125 GIFCHTKKHVTEPQEFHFATNER 147
+ H+ E QEFH T R
Sbjct: 369 PAPQRSTPHLPEFQEFHLQTMAR 391
>AT1G03780.1 | Symbols: TPX2 | targeting protein for XKLP2 |
chr1:948064-951696 REVERSE LENGTH=687
Length = 687
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/385 (49%), Positives = 223/385 (57%), Gaps = 93/385 (24%)
Query: 1 MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
M+AK+PKFKARP+NK KEFHL+T+ARA+Q A+++SIASTE
Sbjct: 346 MLAKIPKFKARPVNK---------------------KEFHLQTMARANQHAETSSIASTE 384
Query: 61 VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
VS + N K HLTEPK+PVLQT LRARP K++ ELEQEELEK PKFKA+PLNKKIFES
Sbjct: 385 VSKQHNDQKHHLTEPKSPVLQTMLRARPTIAKTTAELEQEELEKAPKFKAKPLNKKIFES 444
Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
KG++GIFC+TKKH+T PQEFHFAT+ERI P ++ D+FDK
Sbjct: 445 KGEMGIFCNTKKHITIPQEFHFATDERISRPESVLDIFDK-------------------- 484
Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAV------------ 228
ERGA ARVPKANPYPYTTD+ V
Sbjct: 485 --------ERGAEKEKKFYMELMYKKLGDVKARVPKANPYPYTTDYPVKREMVLINLTCS 536
Query: 229 ---IPPKPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKED 285
+PPKPEPK CT+PEPFQLESLVRH FKAQPV+KED
Sbjct: 537 NSQVPPKPEPKQCTQPEPFQLESLVRHEEEMRREREERRRMETEEAQKRLFKAQPVIKED 596
Query: 286 PIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEK------------------------- 320
PIPVPEKVR PLT++QEF+L + +RAV+RA FD K
Sbjct: 597 PIPVPEKVRMPLTEIQEFNLHVEHRAVERADFDHKVSILFSHFSKQKNASITSEIDESIL 656
Query: 321 ----IKEKETMYKRYREESEAERMV 341
IKEKE YKRYREESEA +MV
Sbjct: 657 FWNQIKEKENQYKRYREESEAAKMV 681
>AT4G22860.2 | Symbols: | Cell cycle regulated microtubule
associated protein | chr4:11997745-12001281 FORWARD
LENGTH=501
Length = 501
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 13/162 (8%)
Query: 7 KFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTEVSHKEN 66
+FKARP N+KI P+LP +STP PEF+EFHL+T RA Q S+ V+ + +
Sbjct: 280 RFKARPFNRKIFDAPSLPIRKKSTPKLPEFQEFHLKTSERAMQH-------SSAVTTRSH 332
Query: 67 SWKPHLTEPKTPVLQTSLR-ARPPKIKSSFELEQEEL-EKIPKFKARPLNKKIFESKGDI 124
++K T +L R +R P S ++ + ++ E FKARPLNKKI S+GD+
Sbjct: 333 AYKESDKSIITDMLDGDNRESRRP---SGMDISKHDVSEGSHVFKARPLNKKILSSRGDM 389
Query: 125 GIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSE 166
GIF ++K+ T P EF F + +R+ P DLF KL +KSE
Sbjct: 390 GIFKNSKRETTVPLEFSFHSEKRVQPDLP-TDLFSKLSIKSE 430
>AT4G22860.1 | Symbols: | Cell cycle regulated microtubule
associated protein | chr4:11997735-12001281 FORWARD
LENGTH=509
Length = 509
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 13/162 (8%)
Query: 7 KFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTEVSHKEN 66
+FKARP N+KI P+LP +STP PEF+EFHL+T RA Q S+ V+ + +
Sbjct: 288 RFKARPFNRKIFDAPSLPIRKKSTPKLPEFQEFHLKTSERAMQH-------SSAVTTRSH 340
Query: 67 SWKPHLTEPKTPVLQTSLR-ARPPKIKSSFELEQEEL-EKIPKFKARPLNKKIFESKGDI 124
++K T +L R +R P S ++ + ++ E FKARPLNKKI S+GD+
Sbjct: 341 AYKESDKSIITDMLDGDNRESRRP---SGMDISKHDVSEGSHVFKARPLNKKILSSRGDM 397
Query: 125 GIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSE 166
GIF ++K+ T P EF F + +R+ P DLF KL +KSE
Sbjct: 398 GIFKNSKRETTVPLEFSFHSEKRVQPDLP-TDLFSKLSIKSE 438
>AT4G11990.1 | Symbols: | Cell cycle regulated microtubule
associated protein | chr4:7186406-7189689 REVERSE
LENGTH=501
Length = 501
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 7 KFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARA--HQSADSASIASTEVSHK 64
+FKARPLN+KI + P+LP STP PEF+EF L+T RA H SA S S +HK
Sbjct: 280 RFKARPLNRKIFEAPSLPIRKNSTPKLPEFQEFRLKTSERAMQHSSAVSTSSYQGNNNHK 339
Query: 65 ENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFESKGDI 124
E KP+ T P R P+ + + ++ ++++ K FKARPLNKKI S +I
Sbjct: 340 EAD-KPNRTFPDGV-------NREPRRQRAIDIPKDDVRK-DLFKARPLNKKILSSGREI 390
Query: 125 GIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSE 166
G+F +K+ T P F F + ER P DLF KL L SE
Sbjct: 391 GMFTKSKRETTAPLGFSFHS-ERTAQPDLPTDLFSKLSLSSE 431
>AT5G44270.1 | Symbols: | TPX2 (targeting protein for Xklp2)
protein family | chr5:17833636-17835740 FORWARD
LENGTH=309
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 285 DPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
+ I V +K++ QEF+L + +R ++RA FD KIKEKE MYKR+ EE+EA +MV
Sbjct: 190 NQISVLDKLKASYRIFQEFNLHVDHRPIERADFDHKIKEKEMMYKRHLEEAEAAKMV 246