Miyakogusa Predicted Gene

Lj0g3v0171439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0171439.1 Non Chatacterized Hit- tr|I1NH37|I1NH37_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.14,0,60S RIBOSOMAL
PROTEIN L3-RELATED,NULL; seg,NULL; no description,NULL;
Ribosomal_L3,Ribosomal protein,CUFF.11615.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43170.8 | Symbols: RP1 | ribosomal protein 1 | chr1:16266992...   478   e-135
AT1G43170.9 | Symbols: RP1 | ribosomal protein 1 | chr1:16266992...   478   e-135
AT1G43170.7 | Symbols: RP1 | ribosomal protein 1 | chr1:16266992...   478   e-135
AT1G43170.6 | Symbols: RP1 | ribosomal protein 1 | chr1:16266992...   478   e-135
AT1G43170.5 | Symbols: RP1 | ribosomal protein 1 | chr1:16266992...   478   e-135
AT1G43170.3 | Symbols: ARP1, RPL3A, RP1 | ribosomal protein 1 | ...   478   e-135
AT1G43170.2 | Symbols: ARP1, RPL3A, RP1 | ribosomal protein 1 | ...   478   e-135
AT1G43170.1 | Symbols: ARP1, emb2207, RPL3A, RP1 | ribosomal pro...   478   e-135
AT1G61580.1 | Symbols: RPL3B, ARP2 | R-protein L3 B | chr1:22720...   464   e-131
AT1G43170.4 | Symbols: ARP1, RPL3A, RP1 | ribosomal protein 1 | ...   329   1e-90

>AT1G43170.8 | Symbols: RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.9 | Symbols: RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.7 | Symbols: RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.6 | Symbols: RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.5 | Symbols: RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.3 | Symbols: ARP1, RPL3A, RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.2 | Symbols: ARP1, RPL3A, RP1 | ribosomal protein 1 |
           chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.1 | Symbols: ARP1, emb2207, RPL3A, RP1 | ribosomal
           protein 1 | chr1:16266992-16268631 FORWARD LENGTH=389
          Length = 389

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/304 (78%), Positives = 261/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD +K  K TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRG+R+LNTVWAQHLSEEV+RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q++SE+GKK +QAQLEK+KKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  +A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G61580.1 | Symbols: RPL3B, ARP2 | R-protein L3 B |
           chr1:22720833-22722402 REVERSE LENGTH=390
          Length = 390

 Score =  464 bits (1193), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/304 (75%), Positives = 260/304 (85%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDP+K  +LT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRG+R+L TVWAQHLSEE++RRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          + E+EEGKK++Q+QLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           + EIQ+NGG +A+KVD+A S FEKQVP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHR                  SA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 283 EFDR 286
           E+DR
Sbjct: 301 EYDR 304


>AT1G43170.4 | Symbols: ARP1, RPL3A, RP1 | ribosomal protein 1 |
           chr1:16267519-16268631 FORWARD LENGTH=306
          Length = 306

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 158/211 (74%), Positives = 176/211 (83%), Gaps = 18/211 (8%)

Query: 94  KTPRGMRTLNTVWAQHLSEEVKRRFYXXXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKI 153
           KTPRG+R+LNTVWAQHLSEEV+RRFY                Q++SE+GKK +QAQLEK+
Sbjct: 11  KTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKM 70

Query: 154 KKYATVVRVLAHTQIRKMKGLKQKKAHIMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQ 213
           KKYATV+RVLAHTQIRKMKGLKQKKAH+MEIQ+NGGT+AQKVDFAYSFFEKQ+PI+AVFQ
Sbjct: 71  KKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQ 130

Query: 214 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 273
           KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQN
Sbjct: 131 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 190

Query: 274 GYHHR------------------SAITEFDR 286
           GYHHR                  +A+TE+DR
Sbjct: 191 GYHHRTELNKKIYRLGKVGTEAHTAMTEYDR 221