Miyakogusa Predicted Gene
- Lj0g3v0170279.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0170279.1 tr|G7LD46|G7LD46_MEDTR Ring finger protein
OS=Medicago truncatula GN=MTR_8g092990 PE=4
SV=1,37.01,0.0000000000002,no description,Zinc finger,
RING/FYVE/PHD-type; ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY
PROTEIN,,CUFF.10685.1
(170 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 162 1e-40
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 161 2e-40
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 149 8e-37
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 147 4e-36
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 119 1e-27
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 119 1e-27
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 111 2e-25
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 110 4e-25
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 107 5e-24
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 105 1e-23
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 102 1e-22
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 91 4e-19
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 89 1e-18
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 87 7e-18
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 86 1e-17
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 85 2e-17
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 84 6e-17
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 82 2e-16
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 82 2e-16
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 81 4e-16
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 80 6e-16
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 8e-16
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 9e-16
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 1e-15
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 2e-15
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 79 2e-15
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 78 2e-15
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 78 3e-15
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 77 6e-15
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 77 6e-15
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 7e-15
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 77 8e-15
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 1e-14
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 76 1e-14
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 1e-14
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 76 1e-14
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 76 1e-14
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 76 1e-14
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 76 1e-14
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 76 1e-14
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 76 1e-14
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 75 2e-14
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 75 2e-14
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 75 2e-14
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 75 2e-14
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 74 4e-14
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 4e-14
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 74 4e-14
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 74 5e-14
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 74 5e-14
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 73 1e-13
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 73 1e-13
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 73 1e-13
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 72 1e-13
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 1e-13
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 1e-13
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 2e-13
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 72 2e-13
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 2e-13
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 72 2e-13
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 72 2e-13
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 2e-13
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 72 3e-13
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 72 3e-13
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 71 3e-13
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 69 1e-12
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 1e-12
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 69 2e-12
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 2e-12
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 2e-12
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 3e-12
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 68 3e-12
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 4e-12
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 67 8e-12
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 8e-12
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 66 1e-11
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 66 1e-11
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 66 1e-11
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 66 1e-11
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 65 3e-11
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 4e-11
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 5e-11
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 7e-11
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 1e-10
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 63 1e-10
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 1e-10
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 2e-10
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 2e-10
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 62 2e-10
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 2e-10
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 62 3e-10
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 61 4e-10
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 61 4e-10
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 60 6e-10
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 60 6e-10
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 60 7e-10
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 60 7e-10
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 60 8e-10
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 9e-10
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 2e-09
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 58 3e-09
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 3e-09
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 3e-09
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 4e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 7e-09
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 8e-09
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 9e-09
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 9e-09
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 56 1e-08
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 56 1e-08
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 2e-08
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 2e-08
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 2e-08
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 55 3e-08
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 3e-08
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 4e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 5e-08
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 5e-08
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 6e-08
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 7e-08
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 7e-08
AT5G43200.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 7e-08
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 8e-08
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 53 1e-07
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 53 1e-07
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 1e-07
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 53 1e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 1e-07
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 53 1e-07
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 1e-07
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-07
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 2e-07
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 2e-07
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 52 2e-07
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 3e-07
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 3e-07
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 51 3e-07
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 51 3e-07
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 51 3e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 51 3e-07
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 4e-07
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 4e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 51 4e-07
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 4e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 5e-07
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 9e-07
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 9e-07
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 50 9e-07
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 50 9e-07
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 50 9e-07
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 9e-07
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 49 1e-06
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 1e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 2e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 49 2e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 2e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 2e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 49 2e-06
AT1G57730.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT3G28620.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 48 3e-06
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 3e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 48 3e-06
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 4e-06
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 5e-06
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 5e-06
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 6e-06
AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 47 6e-06
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 47 7e-06
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 47 7e-06
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 47 7e-06
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 7e-06
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 47 7e-06
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 47 7e-06
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 8e-06
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 162 bits (409), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 106/152 (69%), Gaps = 10/152 (6%)
Query: 1 MTRTL-RILQASNDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRR- 58
M R L R+LQ +N S P + + SD V+I+A LLCAL C++GL A++RCAWLRR
Sbjct: 1 MARLLFRLLQEAN---STSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRI 57
Query: 59 GPVAAGDGT-PPRRASAAKGLKKKVLEALPKFTYV-DGGGTGKWVASSECAICLSEFAAG 116
D T PP A+A KGLKKKVL +LPK TY D K V ECAICL+EFAAG
Sbjct: 58 ASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLV---ECAICLTEFAAG 114
Query: 117 EEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+E+R LPQCGHGFHV CIDTWLGSHSSCPSCR
Sbjct: 115 DELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 109/158 (68%), Gaps = 15/158 (9%)
Query: 1 MTRTL-RILQASNDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRG 59
M R L R+L SN A TAA SD VVI+AALLCALICV+GL A++RC WLRR
Sbjct: 1 MARLLFRLLVESNTPSPAIDNSTAA-LNSDLVVILAALLCALICVLGLIAVSRCVWLRR- 58
Query: 60 PVAAGDGT---------PPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICL 110
+AAG+ T P A+A KGLKKKVL++LPK T+ + A ECAICL
Sbjct: 59 -LAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFA--ECAICL 115
Query: 111 SEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+EF+AG+E+R LPQCGHGFHV CIDTWLGSHSSCPSCR
Sbjct: 116 AEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 149 bits (376), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 99/155 (63%), Gaps = 18/155 (11%)
Query: 1 MTRTLRILQASNDAVSAPPPDTAANK---ESDFVVIMAALLCALICVVGLTAIARCAWLR 57
MTR R+L+ +APPP + ESD VVI++ALLCALICV GL A+ RCAWLR
Sbjct: 1 MTRPSRLLE-----TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLR 55
Query: 58 RGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVA----SSECAICLSEF 113
R A GD P KGLKKK L++LP+ T+ T A S+ECAICL++F
Sbjct: 56 RF-TAGGDSPSPN-----KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDF 109
Query: 114 AAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
A GEE+R LP CGH FHV CID WL S SSCPSCR
Sbjct: 110 ADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 101/164 (61%), Gaps = 25/164 (15%)
Query: 1 MTRTLRILQASNDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRR-- 58
MTR+ R L + S PPP+ E+D VVI++ALLCAL+CV GL A+ARCAWLRR
Sbjct: 1 MTRSSRFLGTA----SPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLT 56
Query: 59 --GPVAAGDGTPPRRASAAKGLKKKVLEALPKFTY------------VDGGGTGKWVASS 104
P A G+ PP KGLKKK L+ALPK TY + G +S+
Sbjct: 57 GVNPAAVGEAPPPN-----KGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSST 111
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
ECAIC++EF+ GEE+R LP C H FHV CID WL S SSCPSCR
Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 13/153 (8%)
Query: 3 RTLRILQASNDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVA 62
+ L+ + +++A A PD N + +++++ LLC +IC +GL I RCA++R
Sbjct: 26 KLLQQIPFAHNAQQAHVPD-KNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFM 84
Query: 63 AGDG----TPPRRASAAKGLKKKVLEALPKFTY---VDGGGTGKWVASSECAICLSEFAA 115
D + PR +S KG+KKK L+ LP Y ++ G G+ EC ICLS+F A
Sbjct: 85 ISDPISIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGE-----ECVICLSDFVA 139
Query: 116 GEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
GE++R LP+C HGFH+ CID WL H +CP CR
Sbjct: 140 GEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCR 172
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 4/125 (3%)
Query: 24 ANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVL 83
A+ ++ V+I+AALLCALIC +G+ ++ RC + A+ AKG+KK+ L
Sbjct: 35 ASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKRAL 94
Query: 84 EALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSS 143
+ +P VD + ++EC ICL +F GE VR LP+C HGFHV CIDTWL SHSS
Sbjct: 95 KVIP----VDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSS 150
Query: 144 CPSCR 148
CP+CR
Sbjct: 151 CPTCR 155
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 1 MTRTLRILQASNDAVSAPPPDTAANK---ESDFVVIMAALLCALICVVGLTAIARCAWLR 57
M R L QA+ A + P P N +++ V+I+AALLCALIC + L + RC
Sbjct: 1 MGRLLLEPQANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRI 60
Query: 58 RGPVAAGDGTPPR--------RASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAIC 109
+ D R +AA GLKK+ L+ +P Y G G A+ EC IC
Sbjct: 61 TRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLY--GSGIIDMKAT-ECLIC 117
Query: 110 LSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
L +F GE+VR LP+C HGFHV CIDTWL S SSCP+CR
Sbjct: 118 LGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCR 156
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 6 RILQASNDAVSAPPPDTAA---NKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPV- 61
++L ++D P P N +++ V++++ LLCAL+C +GL +I RCA V
Sbjct: 29 KLLFHTHDQSPTPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVP 88
Query: 62 --AAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEV 119
A GD P R + G+K+K L++ +Y +ECAICLSEF A E V
Sbjct: 89 SEAGGDNYPVRLTNT--GVKRKALKSFQTVSYSTELNLPG--LDTECAICLSEFVAEERV 144
Query: 120 RSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ LP C HGFHV CID WL SHSSCP+CR
Sbjct: 145 KLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 14 AVSAPPPDTAANKES-DFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPP--- 69
AV+ P T N S + +++++ L+C +IC +GL I RCA R + P
Sbjct: 41 AVAPSPLITHENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSS 100
Query: 70 RRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGF 129
R S+ KG+KKK L P +Y EC ICLS+F +GE++R LP+C HGF
Sbjct: 101 TRGSSNKGIKKKALRMFPVVSYSPEMNLPGL--DEECVICLSDFVSGEQLRLLPKCNHGF 158
Query: 130 HVPCIDTWLGSHSSCPSCR 148
HV CID WL H +CP CR
Sbjct: 159 HVRCIDKWLQQHLTCPKCR 177
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 16/144 (11%)
Query: 14 AVSAPPPDTAANKES-DFVVIMAALLCALICVVGLTAIARCAWLRRGPVA-----AGDGT 67
AV+ P T N S + +++++ L+C +IC +GL I RCA+ R AG T
Sbjct: 42 AVAPSPLITHENNLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLST 101
Query: 68 PPRRASAAKGLKKKVLEALPKFTY---VDGGGTGKWVASSECAICLSEFAAGEEVRSLPQ 124
P S+ KG+ KK L P +Y ++ G G+ EC ICLS+F +GE++R LP+
Sbjct: 102 PC--GSSNKGINKKALRMFPVVSYSPEMNLPGLGE-----ECVICLSDFVSGEQIRMLPK 154
Query: 125 CGHGFHVPCIDTWLGSHSSCPSCR 148
C HGFHV CID WL H +CP CR
Sbjct: 155 CHHGFHVRCIDKWLQQHLTCPKCR 178
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 12/142 (8%)
Query: 14 AVSAPPPDTAANK-ESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGD---GTPP 69
AV+ P T N + + +++++ L+C +IC +GL I RCA+ R +
Sbjct: 41 AVAPSPLITHENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLST 100
Query: 70 RRASAAKGLKKKVLEALPKFTY---VDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCG 126
R+S+ KG+KKK L P +Y ++ G G+ EC ICLS+F +GE++R LP+C
Sbjct: 101 PRSSSNKGIKKKALRMFPVVSYSREMNLPGIGE-----ECVICLSDFVSGEQLRLLPKCN 155
Query: 127 HGFHVPCIDTWLGSHSSCPSCR 148
HGFHV CID WL H +CP CR
Sbjct: 156 HGFHVRCIDKWLQHHLTCPKCR 177
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 66/112 (58%), Gaps = 19/112 (16%)
Query: 37 LLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGG 96
L CA+ C GL++ +A GT RA GLKK+ L+ P Y G G
Sbjct: 55 LRCAMRCGFGLSS------------SAAAGTVADRA----GLKKRELKKFPVAEY--GSG 96
Query: 97 TGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
K +A++ECAICL EFA GE VR LP C H FH+ CIDTWL SHSSCP+CR
Sbjct: 97 EVK-IAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 147
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 14/129 (10%)
Query: 31 VVIMAALLCALICVVGLTAIARCAWLRRGPVAA--------GDG---TPPRRASAAKGLK 79
+ ++ L ALI V T I++ ++ G+G + R ++ GL
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLG 139
+ +++++ + Y G G +V S+C++CLSEF E +R LP+C H FH+PCIDTWL
Sbjct: 119 ESMIKSITVYKYKSGDG---FVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
Query: 140 SHSSCPSCR 148
SHS+CP CR
Sbjct: 176 SHSNCPLCR 184
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 33 IMAALLCALICVVGLTAI-ARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTY 91
I+A ++ A+ +G+ + C + R AAG RA +GL+K+V+E+ P F Y
Sbjct: 51 IIAIVVLAIFISLGMVSCCLHCIFYREEIGAAGQDVLHSRAR--RGLEKEVIESFPTFLY 108
Query: 92 VDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ G ECAICLSEF E +R +P C H FH CID WL S S+CP CR
Sbjct: 109 SEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 25 NKESDF--VVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKV 82
N++++F ++A ++ A+ + + A R V A + A +GL+K++
Sbjct: 41 NRKTNFPTETVIAIIVLAIFISLSMVACFLHKTFYRAEVEAA-SQEVFHSRARRGLEKEL 99
Query: 83 LEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHS 142
+E+ P F Y + G ECAICLSEF E +R +P C H FH CID WL S S
Sbjct: 100 VESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQS 159
Query: 143 SCPSCR 148
+CP+CR
Sbjct: 160 TCPACR 165
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 47/87 (54%)
Query: 62 AAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRS 121
A D T +KGL ++E +PK T T + C++CL +F GE VRS
Sbjct: 152 AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRS 211
Query: 122 LPQCGHGFHVPCIDTWLGSHSSCPSCR 148
LP C H FH+PCID WL H SCP CR
Sbjct: 212 LPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 78 LKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
L + +++++ + Y G +V SS+C++CLSEF E +R LP+C H FHVPCIDTW
Sbjct: 134 LDESLIKSITVYKYRKMDG---FVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTW 190
Query: 138 LGSHSSCPSCR 148
L SHS+CP CR
Sbjct: 191 LKSHSNCPLCR 201
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 9 QASNDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVA------ 62
+A+ + S PPD + A L+ L + GL ++ R P +
Sbjct: 25 KANAQSFSPSPPDLQTGHTPSKTTVFAVLV-TLFFLTGLLSVYIRHCARSNPDSSTRYFR 83
Query: 63 --AGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVR 120
A DG+ R GL V+E+ P F Y + ECAICL+E E VR
Sbjct: 84 NRANDGSSRR-----GGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVR 138
Query: 121 SLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
LP C H FH+ CIDTWL SH++CP CR
Sbjct: 139 LLPICNHLFHIDCIDTWLYSHATCPVCR 166
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 74 AAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPC 133
A++GL V+++LP FT+ D ECA+CLSEF E R LP C H FHV C
Sbjct: 91 ASRGLDPNVIKSLPVFTFSDETHKDPI----ECAVCLSEFEESETGRVLPNCQHTFHVDC 146
Query: 134 IDTWLGSHSSCPSCR 148
ID W SHS+CP CR
Sbjct: 147 IDMWFHSHSTCPLCR 161
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 71/150 (47%), Gaps = 20/150 (13%)
Query: 14 AVSAPPPDTAANKESDFVVIMAALLCALICVVG-----LTAIARCAWLRRGPVAAGDGTP 68
A S PPP+ A SD A++ + +V L A+C DG
Sbjct: 22 AQSPPPPNLYAT--SDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGER 79
Query: 69 PR----------RASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEE 118
R R+S GL KK +E+LP F + G + + EC++CLS+F E
Sbjct: 80 IRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGL---ECSVCLSKFEDVEI 136
Query: 119 VRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+R LP+C H FH+ CID WL H++CP CR
Sbjct: 137 LRLLPKCRHAFHIGCIDQWLEQHATCPLCR 166
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 25 NKESDFV----VIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKK 80
+ +DF V++ ++ ALIC + L A RC +LR D P A+A+
Sbjct: 31 SNSTDFTANASVLLILVISALICALSLYAAIRC-FLRPTLETEDDHKPDPEAAASST--- 86
Query: 81 KVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS 140
P Y A +ECAICLSEF GE ++ L +C HGFHV CI WL +
Sbjct: 87 ---PTTPTLVYSSDLELAG--AEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLST 141
Query: 141 HSSCPSCR 148
SSCP+CR
Sbjct: 142 RSSCPTCR 149
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 26 KESDFVVIMAALLCALICVVGLTAIARCAWLRR--------GPVAAGDGTPPRRASAAKG 77
K SD +++ ++ I +VGL ++ W R P D +A +G
Sbjct: 9 KASDLTLLVITIILFAIFIVGLASVC-FRWTSRQFYSQESINPFTDSDVESRTSITAVRG 67
Query: 78 LKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
L + ++ + P F Y + + ECA+C+ EF E +R +P+C H FH C+ W
Sbjct: 68 LDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVW 127
Query: 138 LGSHSSCPSCR 148
L HS+CP CR
Sbjct: 128 LSDHSTCPLCR 138
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%)
Query: 30 FVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKF 89
F+VI + ++ C +R + R A R A+GL + +E P F
Sbjct: 59 FLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTF 118
Query: 90 TYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
Y + ECA+CL EF E +R +P C H FH C+D WL HS+CP CR
Sbjct: 119 LYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR 177
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 24 ANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGD--------GTPPRRASAA 75
+N ++ ++C ICV+ L + +RR D T ++A
Sbjct: 12 SNSTESQILKFTFIVCVPICVI-LIVLLVLYIMRRNSNTNVDWSSLGGFVPTNNNLSTAE 70
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
GL K + E LP Y + V ++C++CL ++ A E+++ +P CGH FH+ CID
Sbjct: 71 LGLSKDIREMLPIVIYKESFT----VNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECID 126
Query: 136 TWLGSHSSCPSCR 148
WL SH++CP CR
Sbjct: 127 LWLTSHTTCPLCR 139
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 13 DAVSAPPPDTAA---NKESDFVVIMAALLCAL-ICVVGLTA-IARCAWLRRGPVAAGD-- 65
D P P+T A + ES+ + + A + ++ IC + + +LRR D
Sbjct: 5 DPNQNPIPETYAPSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWS 64
Query: 66 ----------GTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAA 115
T ++A GL K + E LP Y + V S+C++CL ++ A
Sbjct: 65 SLGMRGGTFVPTNNNLSTAELGLSKDIREMLPVVIYKESF----IVKDSQCSVCLGDYQA 120
Query: 116 GEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
E+++ +P CGH FH+ CID WL SH++CP CR
Sbjct: 121 EEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCR 153
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 31 VVIMAALLCALICVVGLTAIA--RCAWLRRGPVAAGDGTPPRRA--SAAKGLKKKVLEAL 86
+ ++ +L A + +G +I C+ + V+ G R +AA+GL V+E
Sbjct: 49 MAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETF 108
Query: 87 PKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPS 146
P F Y D ECAICL+EF E +R LP+C H FH CID WL +H +CP
Sbjct: 109 PTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPV 168
Query: 147 CR 148
CR
Sbjct: 169 CR 170
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL + +++ALP F Y + GT + +CA+CL EF+ +++R LP C H FH+ CIDT
Sbjct: 118 GLDQALIDALPVFLYKEIKGTKEPF---DCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDT 174
Query: 137 WLGSHSSCPSCR 148
WL S+S+CP CR
Sbjct: 175 WLLSNSTCPLCR 186
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
Query: 14 AVSAPPP----DTAANKESDFVVIMAALLCALICVVGLTAIARCAW--LRRGP------- 60
+ PPP D AN E V+ L L A+C LR G
Sbjct: 17 SAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHD 76
Query: 61 VAAGDGTPPRRASAAK----GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAG 116
G R++A+ GL K +E+LP F + G+ + + +C++CLS+F +
Sbjct: 77 RRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGL---DCSVCLSKFESV 133
Query: 117 EEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
E +R LP+C H FH+ CID WL H++CP CR
Sbjct: 134 EILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 65 DGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQ 124
D T + +KGL L +PK D T + S C++CL +F GE VRSLP
Sbjct: 164 DHTDIFDTAISKGLTGDSLNRIPKVRITD---TSPEIVS--CSVCLQDFQVGETVRSLPH 218
Query: 125 CGHGFHVPCIDTWLGSHSSCPSCR 148
C H FH+PCID WL H+SCP CR
Sbjct: 219 CHHMFHLPCIDKWLRRHASCPLCR 242
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 70 RRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGF 129
RR S +GL K V+ + P F Y G ECAICL+EF E +R +P C H F
Sbjct: 94 RRTS--RGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAF 151
Query: 130 HVPCIDTWLGSHSSCPSCR 148
H CID WL S S+CP CR
Sbjct: 152 HASCIDVWLSSRSTCPVCR 170
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 65 DGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQ 124
D T + +KGL L +PK D T + S C++CL +F GE VRSLP
Sbjct: 140 DHTDIFDTAISKGLTGDSLNRIPKVRITD---TSPEIVS--CSVCLQDFQVGETVRSLPH 194
Query: 125 CGHGFHVPCIDTWLGSHSSCPSCR 148
C H FH+PCID WL H+SCP CR
Sbjct: 195 CHHMFHLPCIDKWLRRHASCPLCR 218
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 70 RRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGF 129
R S +GL + + +LP + Y + +C ICLS+F GE V+ +P CGH F
Sbjct: 108 RPYSFRRGLDSQAVRSLPVYRYTKAAKQ----RNEDCVICLSDFEEGETVKVIPHCGHVF 163
Query: 130 HVPCIDTWLGSHSSCPSCR 148
HV C+DTWL S+ +CP CR
Sbjct: 164 HVDCVDTWLSSYVTCPLCR 182
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 46 GLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSE 105
G T I R RR A P A GL K+L+++ + + E
Sbjct: 68 GSTVIGRNPRRRRFVFAQSQEDPLHNA----GLDSKILQSIHVVVF----KCTDFKDGLE 119
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
CA+CLS+ G++ R LP+C HGFHV CID W SHS+CP CR
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 74 AAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPC 133
+KGL +++ +PK C++CL +F GE VRSLP C H FH+PC
Sbjct: 159 GSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPC 218
Query: 134 IDTWLGSHSSCPSCR 148
ID WL H SCP CR
Sbjct: 219 IDNWLFRHGSCPMCR 233
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL++ ++ ++ Y G G + ++C +CL+EF E +R LP+C H FH+ CIDT
Sbjct: 151 GLQQSIINSITICNYKRGDG---LIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDT 207
Query: 137 WLGSHSSCPSCR 148
WL SH++CP CR
Sbjct: 208 WLSSHTNCPLCR 219
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL + ++ALP F Y G T +CA+CL+EF+ +++R LP C H FH+ CIDT
Sbjct: 180 GLDQTAIDALPVFLY--GNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDT 237
Query: 137 WLGSHSSCPSCR 148
WL S+S+CP CR
Sbjct: 238 WLLSNSTCPLCR 249
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 21 DTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKK 80
D AAN +++ L C+ ICV+ L A RC LR PV P L+
Sbjct: 32 DFAANA----FLLLIILFCSFICVLSLHAAIRCC-LR--PVLQHVPKP------DPDLEA 78
Query: 81 KVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWL-G 139
+A P Y G +EC ICLSEF G+ +R L +C HGFHV CI WL
Sbjct: 79 THPDAPPTLVYSPGLNLAG--NEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSS 136
Query: 140 SHSSCPSCR 148
SHSSCP+CR
Sbjct: 137 SHSSCPTCR 145
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 31 VVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTP--PRRASAAKG----------- 77
+V++ L ++I V +L R D ++A +G
Sbjct: 35 IVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNLHDA 94
Query: 78 -LKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
+ + ++ALP Y G S+CA+CL EF A +E+R LP+C H FHV CIDT
Sbjct: 95 EIDQSFIDALPLLHY--KTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDT 152
Query: 137 WLGSHSSCPSCR 148
WL ++S+CP CR
Sbjct: 153 WLLTNSTCPLCR 164
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 18 PPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRR--ASAA 75
P P T + +A+L ++ V L AR RR G R
Sbjct: 20 PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVIFRHPFEMPK 79
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
+GL V+ +LP FT G G +++ECA+CLS ++ R LP C H FHV C+D
Sbjct: 80 RGLNPTVIASLPTFTV--GATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVD 137
Query: 136 TWLGSHSSCPSCR 148
TWL + S+CP CR
Sbjct: 138 TWLTTCSTCPVCR 150
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASS-------ECAICLSEFAAGEEVRSLPQCGHGF 129
GL V++ LP F Y TGK +CA+CL EF G+ VR+LP C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 130 HVPCIDTWLGSHSSCPSCR 148
H+ CID WL SH +CP CR
Sbjct: 180 HLECIDEWLRSHPNCPLCR 198
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASS-------ECAICLSEFAAGEEVRSLPQCGHGF 129
GL V++ LP F Y TGK +CA+CL EF G+ VR+LP C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 130 HVPCIDTWLGSHSSCPSCR 148
H+ CID WL SH +CP CR
Sbjct: 180 HLECIDEWLRSHPNCPLCR 198
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
G+ + V+E+LP F + G ECA+CL+ F E +R LP+C H FHV C+DT
Sbjct: 66 GIDRSVIESLPVFRF---GALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDT 122
Query: 137 WLGSHSSCPSCR 148
WL +HS+CP CR
Sbjct: 123 WLDAHSTCPLCR 134
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 32 VIMAALL-CALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFT 90
V MA LL C +C+V L + R + P + KGL LE +PK T
Sbjct: 32 VFMALLLPCVGMCIVFLIYLFLLWCSTRRRIERLRFAEPVKPVTGKGLSVLELEKIPKLT 91
Query: 91 YVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
G S+ECA+CL + +G+ R +P C HGFH C DTWL +H+ CP CR
Sbjct: 92 ---GRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCR 146
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 58 RGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGE 117
R AA D P + +S+ L VLE +P F Y EC++CLSEF +
Sbjct: 70 RSLAAARD--PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPL---EECSVCLSEFEEDD 124
Query: 118 EVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
E R LP+CGH FHV CIDTW S SSCP CR
Sbjct: 125 EGRVLPKCGHVFHVDCIDTWFRSRSSCPLCR 155
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 50 IARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAIC 109
+ R + R A+ T P +S GL ++++LP FT+ + + EC++C
Sbjct: 26 LLRSSPFNRTTAASTFFTDP--SSTPGGLNPSIIKSLPIFTF----SAVTALFAMECSVC 79
Query: 110 LSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
LSEF E R +P C H FHV CID W SHSSCP CR
Sbjct: 80 LSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCR 118
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
G+ + +++ LP F Y G ++ +C +CL EF +++R LP+C H FHV CIDT
Sbjct: 99 GVDQSLIDTLPVFHY--KSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 137 WLGSHSSCPSCR 148
WL SHS+CP CR
Sbjct: 157 WLLSHSTCPLCR 168
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 28 SDFVVIMAALLCALICVVGLTAIARCAWLRR-----------GPVAAGDGTPPRRASAAK 76
S F MA L+ L+ V ++RR P AG+ R A +
Sbjct: 57 SRFDPTMAILMIVLVSVFFFLGFF-SVYIRRCLERVMGMDYGNPNDAGNWLATNRQQA-R 114
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL ++E P F Y + EC++CL+EF E +R +P+C H FH CID
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 137 WLGSHSSCPSCR 148
WL SH++CP CR
Sbjct: 175 WLRSHTTCPLCR 186
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 17 APPPDTAANKESDFVV---IMAALLCALICVVGLTAIARCAWLRRGP---VAAGDGTPPR 70
A PPD ++ ++ I+ + I + + R RR A PR
Sbjct: 159 ADPPDETKSRLRPLIITLCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPR 218
Query: 71 RASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSE--CAICLSEFAAGEEVRSLPQCGHG 128
GL + +E+ K V+ G + + ++ C ICLSE+A+ E VR +P+C H
Sbjct: 219 GVVVTTGLDQSTIESYKK---VELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHC 275
Query: 129 FHVPCIDTWLGSHSSCPSCR 148
FHV CID WL HSSCP CR
Sbjct: 276 FHVQCIDEWLKIHSSCPVCR 295
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 62 AAGDGTPPRRASAAKGLKKKVLEALPKFTYVDG---GGTGKWVASSECAICLSEFAAGEE 118
AA PR A +GL + +E K + GT V C ICLSE+A+ E
Sbjct: 95 AATVMQQPREVMARRGLDQSTIETFKKMELGESRRLSGTNGIV----CPICLSEYASKET 150
Query: 119 VRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
VR +P+C H FHV CID WL H SCP CR
Sbjct: 151 VRFIPECDHCFHVECIDVWLKIHGSCPLCR 180
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%)
Query: 62 AAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRS 121
A D T +KGL ++E +PK T T + C++CL +F GE VRS
Sbjct: 152 AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRS 211
Query: 122 LPQCGHGFHVPCIDTWLGSH 141
LP C H FH+PCID WL H
Sbjct: 212 LPHCHHMFHLPCIDNWLLRH 231
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 69 PRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHG 128
PRR +GL + +++ P F Y + G + EC +CL+EF E +R +P C H
Sbjct: 50 PRRP--PRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHV 107
Query: 129 FHVPCIDTWLGSHSSCPSCR 148
FH C+D WL S+CP CR
Sbjct: 108 FHADCVDIWLSHSSTCPICR 127
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 70 RRASAAKGLKKKVLEAL-PKFTYVDGG---GTGKWVASSECAICLSEFAAGEEVRSLPQC 125
R +GLK+ V+E L PK G K + S ECAICLS + EE R P C
Sbjct: 90 EREGKKRGLKQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVC 149
Query: 126 GHGFHVPCIDTWLGSHSSCPSCR 148
H +H CID WL +H +CP+CR
Sbjct: 150 RHIYHALCIDAWLKNHLTCPTCR 172
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
+G+ K V+E+ P F Y + ECAICL EF E +R +P C H FH CID
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 136 TWLGSHSSCPSCR 148
WL S S+CP CR
Sbjct: 150 EWLSSRSTCPVCR 162
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 72 ASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHV 131
A+ A+GL + +E P F Y + + ECAICL+EF E +R LP+C H FH
Sbjct: 90 ATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHP 149
Query: 132 PCIDTWLGSHSSCPSCR 148
CI WL H +CP CR
Sbjct: 150 HCIGAWLQGHVTCPVCR 166
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query: 68 PPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGH 127
PP+R GL V+ +LP F G VA +ECA+CLS + R LP C H
Sbjct: 71 PPKR-----GLDSLVIASLPTFVV----GIKNDVAGTECAVCLSLLEEKDNARMLPNCKH 121
Query: 128 GFHVPCIDTWLGSHSSCPSCR 148
FHV C+DTWL + S+CP CR
Sbjct: 122 VFHVSCVDTWLTTQSTCPVCR 142
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
G+ + ++ LP F Y G + +CA+CL EF +++R LP+C H FH+ CIDT
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLKNYPF--DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 137 WLGSHSSCPSCR 148
WL SHS+CP CR
Sbjct: 165 WLLSHSTCPLCR 176
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
+ L + VL+ +P F Y EC++CLSEF +E R LP+CGH FHV CID
Sbjct: 79 QALDQAVLDKIPIFVY-SSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCID 137
Query: 136 TWLGSHSSCPSCR 148
TW S S+CP CR
Sbjct: 138 TWFRSRSTCPLCR 150
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL + + ++ + G G + +EC++CL+EF E +R LP+C H FH+ CIDT
Sbjct: 109 GLHRSAINSITVVGFKKGEGI---IDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDT 165
Query: 137 WLGSHSSCPSCR 148
WL SH +CP CR
Sbjct: 166 WLLSHKNCPLCR 177
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 75 AKGLKKKVLEALPKFTYVDGGGTGKWV-----------ASSECAICLSEFAAGEEVRSLP 123
++GL + V+ A+P F + V S EC++CLSEF E++R +P
Sbjct: 96 SRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIP 155
Query: 124 QCGHGFHVPCIDTWLGSHSSCPSCR 148
C H FH+ CID WL ++++CP CR
Sbjct: 156 NCSHLFHIDCIDVWLQNNANCPLCR 180
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 68 PPRRASAAKGLKKKVLEALP-KFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCG 126
P + A + GL L +LP F D G EC+ICLSE G++ R LP+C
Sbjct: 93 PGQDALSNTGLTSFELSSLPIVFFRQDSCKDGL-----ECSICLSELVKGDKARLLPKCN 147
Query: 127 HGFHVPCIDTWLGSHSSCPSCR 148
H FHV CID W SHS+CP CR
Sbjct: 148 HSFHVECIDMWFQSHSTCPICR 169
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
G+K VL ++P + T + EC +CLSE A G++ R LP C H FHV CID+
Sbjct: 63 GIKPYVLRSIPIVDF----NTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDS 118
Query: 137 WLGSHSSCPSCR 148
WL S+S+CP CR
Sbjct: 119 WLQSNSTCPICR 130
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL V+ ++ Y G V ++C++CLSEF E +R LP+C H FH+ CIDT
Sbjct: 191 GLNPTVISSIKVCQYSKKDGV---VEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDT 247
Query: 137 WLGSHSSCPSCR 148
WL SH++CP CR
Sbjct: 248 WLRSHTNCPLCR 259
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 58 RGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGE 117
P P S+ GL +++ + F + G + ++C+ICL EF E
Sbjct: 108 NSPERGDQDDPFALESSTAGLDDTLIKKI-GFFKLKKHQNGFKINGTDCSICLGEFNEDE 166
Query: 118 EVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+R LP+C H FHV CID WL SHS+CP CR
Sbjct: 167 SLRLLPKCNHTFHVVCIDRWLKSHSNCPLCR 197
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 76 KGLKKKVLEALPKFTY----VDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHV 131
+GL + + A+P F + V G + S EC++CL+EF E++R +P C H FH+
Sbjct: 100 RGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHI 159
Query: 132 PCIDTWLGSHSSCPSCR 148
CID WL +++CP CR
Sbjct: 160 DCIDIWLQGNANCPLCR 176
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
KGL V+ ++P F Y + EC ICL + AG+ R L CGHGFHV CID
Sbjct: 110 KGLDSSVISSIPLFVYE--ENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECID 167
Query: 136 TWLGSHSSCPSCR 148
WL SHS+CP CR
Sbjct: 168 MWLSSHSTCPLCR 180
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 77 GLKKKVLEALPKFTY-VDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
GL K++E+ P++ Y V GT +C+ICL+EF + +R + C H FH CID
Sbjct: 130 GLDSKIIESFPEYPYSVKDHGTD------QCSICLTEFMDDDTIRLISTCNHSFHTICID 183
Query: 136 TWLGSHSSCPSCR 148
W H +CP CR
Sbjct: 184 LWFEGHKTCPVCR 196
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 31 VVIMAALLCALICVVGLTAIARCAWLRRG----PVAAGD-GTPPRRASAAKGLKKKVLEA 85
V+I +++ A+I V AI RR P AA PR A +GL + +E
Sbjct: 237 VLICLSIIGAVILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQSTIE- 295
Query: 86 LPKFTYVDGGGTGKWVASS--ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSS 143
K+ ++ G + + ++ C ICLSE+ + E VR +P+C H FH CID WL H S
Sbjct: 296 --KYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGS 353
Query: 144 CPSCR 148
CP CR
Sbjct: 354 CPLCR 358
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Query: 77 GLKKKVLEALPKFTYVD-------GGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGF 129
GL + ++ALP F Y + GGG G +CA+CL EF+ +++R LP C H F
Sbjct: 107 GLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAF 166
Query: 130 HVPCIDTWLGSHSSCPSCR 148
H+ CIDTWL S+S+CP CR
Sbjct: 167 HLNCIDTWLQSNSTCPLCR 185
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 69 PRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSE---CAICLSEFAAGEEVRSLPQC 125
P A GL + +E+ K V+ G + + S C ICLSE+A E VR LP+C
Sbjct: 290 PSNEVARIGLDESTIESYKK---VELGESRRLPTGSNDVVCPICLSEYATKETVRCLPEC 346
Query: 126 GHGFHVPCIDTWLGSHSSCPSCR 148
H FH CID WL HSSCP CR
Sbjct: 347 EHCFHTECIDAWLKLHSSCPVCR 369
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 71 RASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFH 130
R + GL V+E P F Y + EC +CL+EF E +R +PQC H FH
Sbjct: 83 RQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFH 142
Query: 131 VPCIDTWLGSHSSCPSCR 148
CID WL S ++CP CR
Sbjct: 143 PGCIDAWLRSQTTCPLCR 160
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 45 VGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASS 104
VG+ R A L + VA P GL + ++E+ K + G + + ++
Sbjct: 260 VGVCTSERFASLIQRNVAIA-ALQPNEVIVTTGLDESIIESYKK---TELGESRRLPGNN 315
Query: 105 E---CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ C ICLSE+A+ E VR +P+C H FH CID WL H SCP CR
Sbjct: 316 DDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCR 362
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 2/121 (1%)
Query: 30 FVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDG--TPPRRASAAKGLKKKVLEALP 87
V C L + + L G D P GL+ +++ + P
Sbjct: 32 LVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSDNPLQQPEAPPVNPGLELRIINSFP 91
Query: 88 KFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSC 147
F Y + ECAICL EF +R L C H FH CID W SH +CP C
Sbjct: 92 TFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVC 151
Query: 148 R 148
R
Sbjct: 152 R 152
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 31 VVIMAALLCALICVVGLTAIARCAWLRRGPVAAGD----GTPPRRASAAKGLKKKVLEAL 86
VI A + L + L+R P GD TPP GL ++ +
Sbjct: 33 FVIFAGFFSLFLWQFLLNRLFTTWNLQRTPY--GDLIHVATPPENT----GLDPFIIRSF 86
Query: 87 PKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPS 146
P F Y K +ECAICLSEF+ + VR + C H FH CID W H +CP
Sbjct: 87 PVFHY---SSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPV 143
Query: 147 CR 148
CR
Sbjct: 144 CR 145
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 79 KKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWL 138
+ VL++LP F + + S +CA+CLS+F +++R LP C H FH CID WL
Sbjct: 90 RSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWL 149
Query: 139 GSHSSCPSCR 148
S+ +CP CR
Sbjct: 150 VSNQTCPLCR 159
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL K++ E LP + + V S+C++CL ++ ++++ +P C H FH+ CID
Sbjct: 75 GLSKELREMLPIVVFKESFT----VMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDL 130
Query: 137 WLGSHSSCPSCR 148
WL SH++CP CR
Sbjct: 131 WLTSHTTCPLCR 142
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 60 PVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEV 119
P DG PPR A+K +V+E LP + + K+ A +EC IC G+++
Sbjct: 189 PDILDDGGPPRAPPASK----EVVEKLPVIIFTEEL-LKKFGAEAECCICKENLVIGDKM 243
Query: 120 RSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ LP C H FH PC+ WL H+SCP CR
Sbjct: 244 QELP-CKHTFHPPCLKPWLDEHNSCPICR 271
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 72 ASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHV 131
++ GL + ++ LP+F + + ++ S+C +C F G+ R+LP CGH FH
Sbjct: 78 QESSDGLSSRFVKKLPQFKFSEPSTYTRY--ESDCVVCFDGFRQGQWCRNLPGCGHVFHR 135
Query: 132 PCIDTWLGSHSSCPSCR 148
C+DTWL S+CP CR
Sbjct: 136 KCVDTWLLKASTCPICR 152
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL +E+ PK + K V + CAICLSE+ E +R++PQC H FH CID
Sbjct: 302 GLDGPTIESYPKIVLGESKRLPK-VDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDE 360
Query: 137 WLGSHSSCPSCR 148
WL + +CP CR
Sbjct: 361 WLKLNGTCPVCR 372
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
GL + +++ PK Y + G +S CAICL ++ +R LP C H FH+ CIDT
Sbjct: 121 GLDEDTIQSYPKILYSEAKGP---TTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 177
Query: 137 WLGSHSSCPSCR 148
WL + +CP CR
Sbjct: 178 WLRLNPTCPVCR 189
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 77 GLKKKVLEALPKFTYV---------DGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGH 127
GL V+ + PKF + DG G+ ++ C+ICL E+ E +R +P+C H
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETT-CSICLCEYMEEEMLRMMPECKH 157
Query: 128 GFHVPCIDTWLGSHSSCPSCR 148
FHV C+D WL + SCP CR
Sbjct: 158 YFHVYCLDAWLKLNGSCPVCR 178
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 100 WVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
W + C ICLSE+ + E V+ LP+C H FH CID WL H+SCP CR
Sbjct: 258 WRNDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCR 306
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 72 ASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHV 131
A GL + V+E+ P+ D + + C+ICL ++ A E VR +P+C H FH
Sbjct: 61 AEVKLGLDRPVIESYPRIVLGDSRRLPRP-NNGPCSICLCDYEAREPVRCIPECNHCFHT 119
Query: 132 PCIDTWLGSHSSCPSCR 148
C+D WL + ++CP CR
Sbjct: 120 DCVDEWLRTSATCPLCR 136
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 61 VAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGK-----WVASSECAICLSEFAA 115
VA D GL + V+ + PKF + + C+ICL E+
Sbjct: 88 VAEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKE 147
Query: 116 GEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
E +R +P+C H FH+ C+D WL + SCP CR
Sbjct: 148 AEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCR 180
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
KGL K ++ +P F T S C+ICL ++ GE R L +CGH FH+ CID
Sbjct: 146 KGLSKSSIQNIPMFYNRSEHQT-----KSSCSICLQDWEEGEVGRKLARCGHTFHMNCID 200
Query: 136 TWLGSHSSCPSCR 148
WL +CP CR
Sbjct: 201 EWLLRQETCPICR 213
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ C ICL + GE RSLP+C H FH+ C+D WL H SCP CR
Sbjct: 174 THCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 17/152 (11%)
Query: 12 NDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAA-----GDG 66
N + P P +K +VI+ ++ ++ +G AI C A +G
Sbjct: 8 NQNTTVPYPPQHYSKPP--LVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNG 65
Query: 67 TPPRRASAAK---------GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGE 117
P + A + GL+ ++++ P F + + ECAICL EF
Sbjct: 66 LPENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEH 125
Query: 118 -EVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+R L C H FH CID WL S+ +CP CR
Sbjct: 126 ILLRLLTTCYHVFHQECIDQWLESNKTCPVCR 157
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSE----CAICLSEFAAGEEVRSLPQCGHGFHVP 132
GL ++V++ PK Y + + S C+ICL+++ + +R LP C H FH
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDN 155
Query: 133 CIDTWLGSHSSCPSCR 148
C+D WL H +CP CR
Sbjct: 156 CVDPWLRLHPTCPVCR 171
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 73 SAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVP 132
+ GL + ++ LP+F Y + +C +C+ F G+ R LP+CGH FH
Sbjct: 85 EYSDGLSPRCVKRLPQFKYCEPSSE---YGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRK 141
Query: 133 CIDTWLGSHSSCPSCR 148
C+D WL S+CP CR
Sbjct: 142 CVDLWLIKVSTCPICR 157
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 18/83 (21%)
Query: 66 GTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQC 125
GTPP R K+ +EALP T K + +C++CL +F G E + +P C
Sbjct: 236 GTPPAR--------KEAVEALP---------TVKIMEPLQCSVCLDDFEKGTEAKEMP-C 277
Query: 126 GHGFHVPCIDTWLGSHSSCPSCR 148
H FHV CI WL HSSCP CR
Sbjct: 278 KHKFHVRCIVPWLELHSSCPVCR 300
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+EC++CL F +E+R L +C H FHV CI+TWL H +CP CR
Sbjct: 140 NECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICR 184
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
EC ICL EF G EVR LP C H FHV CID WL + CP CR
Sbjct: 234 ECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCR 276
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 71 RASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFH 130
R + L K++ LP FT+ D A CAICL ++ GE +R LP C H FH
Sbjct: 200 RHTRTIRLDAKLVHTLPCFTFTDSAHHK---AGETCAICLEDYRFGESLRLLP-CQHAFH 255
Query: 131 VPCIDTWLGSH-SSCPSCR 148
+ CID+WL +SCP C+
Sbjct: 256 LNCIDSWLTKWGTSCPVCK 274
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 71 RASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFH 130
R + L K++ LP FT+ D A CAICL ++ GE +R LP C H FH
Sbjct: 200 RHTRTIRLDAKLVHTLPCFTFTDSAHHK---AGETCAICLEDYRFGESLRLLP-CQHAFH 255
Query: 131 VPCIDTWLGSH-SSCPSCR 148
+ CID+WL +SCP C+
Sbjct: 256 LNCIDSWLTKWGTSCPVCK 274
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 79 KKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWL 138
+K+V++ LP T K S +C+ICL +F G E + +P C H FH+ CI WL
Sbjct: 223 RKEVVDNLP---------TVKISESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWL 272
Query: 139 GSHSSCPSCR 148
HSSCP CR
Sbjct: 273 ELHSSCPVCR 282
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 79 KKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWL 138
+K+V++ LP T K S +C+ICL +F G E + +P C H FH+ CI WL
Sbjct: 223 RKEVVDNLP---------TVKISESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWL 272
Query: 139 GSHSSCPSCR 148
HSSCP CR
Sbjct: 273 ELHSSCPVCR 282
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 40 ALICVVGLTAI-ARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTG 98
I ++ ++AI A C +RR + P + + +L+++P T V G
Sbjct: 168 TFISLLAMSAILATCFVVRRHQIRQSVRDLPHGGQGLSCMPRDLLQSMP--TEVYSGVLE 225
Query: 99 KWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS-HSSCPSCR 148
+ S CAIC+ ++ GE++R LP C H +H CID+WLG S CP C+
Sbjct: 226 ESSTSVTCAICIDDYCVGEKLRILP-CKHKYHAVCIDSWLGRCRSFCPVCK 275
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 22/135 (16%)
Query: 19 PPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGL 78
PP+T + S + I L A+ CV + C + R + T S G+
Sbjct: 157 PPNTEDSVWSLYASIALILSLAIFCV-----MVTCVFFYRYCSTIRNST-----SQFNGM 206
Query: 79 KKKVLEALPKFTY----VDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCI 134
++ ++A+P T+ +D TG CAICL ++ G+++R LP C H FHV C+
Sbjct: 207 CRRTVKAMPSVTFTCAKIDNT-TGF-----SCAICLEDYIVGDKLRVLP-CSHKFHVACV 259
Query: 135 DTWLGS-HSSCPSCR 148
D+WL S + CP C+
Sbjct: 260 DSWLISWRTFCPVCK 274
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 75 AKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCI 134
A G+ VL ++P ++ + + EC +CLS+F ++ R LP C H FH
Sbjct: 52 ATGINPSVLLSIPVVSF----NANAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFT 107
Query: 135 DTWLGSHSSCPSCR 148
DTWL S +CP+CR
Sbjct: 108 DTWLHSDYTCPNCR 121
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 70 RRASAAKGLKKKVLEALPKFTYV-DGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHG 128
RR +GL V+ A P F+Y D EC +CL ++ LP C H
Sbjct: 54 RREPRCQGLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHM 113
Query: 129 FHVPCIDTWLGSHSSCPSCR 148
F CI WL SH++CP CR
Sbjct: 114 FDEECIGKWLESHATCPVCR 133
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C ICL E+ ++R L CGH FH+ CID+WL +CPSCR
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCR 122
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 61 VAAGDGTPPRRASAAKGLKKKVLEALPKFTY--VDGGGTGKWVASS-ECAICLSEFAAGE 117
V++ G S+ KG + +LP + Y +D + EC ICL+++ E
Sbjct: 241 VSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKE 300
Query: 118 EVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
EVR LP C H FH+ C+D WL S CP C+
Sbjct: 301 EVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 61 VAAGDGTPPRRASAAKGLKKKVLEALPKFTY--VDGGGTGKWVASS-ECAICLSEFAAGE 117
V++ G S+ KG + +LP + Y +D + EC ICL+++ E
Sbjct: 241 VSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKE 300
Query: 118 EVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
EVR LP C H FH+ C+D WL S CP C+
Sbjct: 301 EVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 10 ASNDAVSAPPPDTAANKESDFVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPP 69
+ ++ + D A+++E ++++ +I + G + + LR + +G PP
Sbjct: 37 SDQESSNGDDDDVASSRER--IILVNPFTQGMIVLEGSSGMN--PLLRSLLESREEGRPP 92
Query: 70 RRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGF 129
AS A ++A+P +DG EC ICL E+ + E V+ +P C H F
Sbjct: 93 --ASKAS------IDAMP-IVEIDG-------CEGECVICLEEWKSEETVKEMP-CKHRF 135
Query: 130 HVPCIDTWLGSHSSCPSCR 148
H CI+ WLG H SCP CR
Sbjct: 136 HGGCIEKWLGFHGSCPVCR 154
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
S C +CL EF EE+ +P C H FH+ CI WL SH++CP CR
Sbjct: 103 SLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCR 147
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 23/95 (24%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVA----------------------SSECAICLSEF 113
+G K ++ +PKF + G K +EC ICL E+
Sbjct: 286 EGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEY 345
Query: 114 AAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
G E+R LP C H FH CID WL +S CP C+
Sbjct: 346 EDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCK 379
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 27/43 (62%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
CA+CL E GE++R L C H FH CIDTWL S CP CR
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCR 104
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+S C ICL + A GE++R + C H FHV CID WL S+CP CR
Sbjct: 66 SSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCR 112
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 32 VIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTY 91
++ A + C L C++ + RG A P +K + +
Sbjct: 278 ILCATICCCLPCLISVLGFRENFSQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGF 337
Query: 92 VDGGGTGKWVASSE---CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ G K + S E C ICL+ + E+VR LP C H FHV C+D WL +++CP C+
Sbjct: 338 LLLGSQKKRLISGEDASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCK 396
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+EC ICLS + G E+R LP CGH FH C+D WL +++CP C+
Sbjct: 351 AECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCK 394
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 103 SSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+EC ICLS + G E+R LP CGH FH C+D WL +++CP C+
Sbjct: 279 DAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCK 323
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLG 139
K +E +P+ G K CAICL E++ G+ +P C H FH C++ WLG
Sbjct: 87 KSEVENMPRVVI----GEDKEKYGGSCAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLG 141
Query: 140 SHSSCPSCR 148
H++CP CR
Sbjct: 142 RHATCPMCR 150
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 18/83 (21%)
Query: 66 GTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQC 125
GTPP KK+ +EAL T K + +C++CL +F G E + +P C
Sbjct: 200 GTPP--------AKKEAVEAL---------ATVKIEETLQCSVCLDDFEIGTEAKLMP-C 241
Query: 126 GHGFHVPCIDTWLGSHSSCPSCR 148
H FH C+ WL HSSCP CR
Sbjct: 242 THKFHSDCLLPWLELHSSCPVCR 264
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C+ICL E G E+ + +C H FH CID+WL + SCP+CR
Sbjct: 117 CSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNCR 159
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHS--SCPSCR 148
C +CLS+F + ++VR LP+CGH FH C+D W+ ++ CP CR
Sbjct: 86 CTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCR 130
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 66 GTPPRRASAAKGLKK-KVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQ 124
GTPP SA L KV + + K ++CA+C+ EF G +V+ +P
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLK------------SEMNQCAVCMDEFEDGSDVKQMP- 233
Query: 125 CGHGFHVPCIDTWLGSHSSCPSCR 148
C H FH C+ WL H+SCP CR
Sbjct: 234 CKHVFHQDCLLPWLELHNSCPVCR 257
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWL- 138
+ + E+L T+ D + + CA+CL + G+EVR L C H FH CID WL
Sbjct: 56 QAIKESLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLD 115
Query: 139 --------------GSHSSCPSCR 148
+H +CP CR
Sbjct: 116 YECCGGDENNEGEEDNHRTCPLCR 139
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C ICL+++A EE+R LP C H FH C+D WL ++SCP C+
Sbjct: 363 CCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCK 404
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 78 LKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
+ K +L+++P Y G + S CAIC+ ++ GE +R LP C H +H CID+W
Sbjct: 90 MPKDLLQSMPTEVYT--GVLEEGSTSVTCAICIDDYRVGEILRILP-CKHKYHAVCIDSW 146
Query: 138 LGS-HSSCPSCR 148
LG S CP C+
Sbjct: 147 LGRCRSFCPVCK 158
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 32 VIMAALLCALICVVGLTAIARCAWLRRGP--------VAAGDGTPPR-RASAAKGLKKKV 82
VI LC + T IAR P + G T P+ + + A G +
Sbjct: 31 VIFIYKLCIDLSQQPPTEIARETHQNSHPPPDQLQQDIETGHVTLPQPQQNIAVGYMTWI 90
Query: 83 LEA-LPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSH 141
E + +F + G + C ICL EF G E+ + C H FH CID WL +
Sbjct: 91 HETTILEFKDIKEGSNKIF-----CPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQN 145
Query: 142 SSCPSCR 148
+CP+CR
Sbjct: 146 LTCPNCR 152
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
CAIC +F GE R LP C H +H CI WL SH+SCP CR
Sbjct: 96 CAICREDFVVGESARRLP-CNHLYHNDCIIPWLTSHNSCPLCR 137
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 101 VASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
VA +C IC E+ A +EV L +CGH FH+ C++ WL +SCP C+
Sbjct: 314 VADRKCIICQDEYEAKDEVGEL-RCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT5G43200.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr5:17346141-17346764 REVERSE
LENGTH=207
Length = 207
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 68 PPRRASAAKGLKKKVLEALPKF-TYVDGG-GTGKWVASSECAICLSEFAAGEEVRSLPQC 125
PP + L KV +P T +D G+ S CAICL E + ++ LP C
Sbjct: 116 PPLFIIVSVKLTHKVYVVVPPLATDLDQEMSQGEEEESKTCAICLEELSTSDDYCELPNC 175
Query: 126 GHGFHVPCIDTWL-GSHSSCPSCR 148
H FH PC+ WL ++SCP CR
Sbjct: 176 THCFHEPCLTQWLIRGNNSCPLCR 199
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+S C ICL GE++R + C H FHV CID WL S CP CR
Sbjct: 66 SSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCR 112
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+C++CL +F G E + +P C H FH C+ WL HSSCP CR
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+C++CL +F G E + +P C H FH C+ WL HSSCP CR
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+C++CL +F G E + +P C H FH C+ WL HSSCP CR
Sbjct: 224 QCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCR 266
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 77 GLKKKVLEALPK--FTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCI 134
G+ +++++A+P F+ T + CAICL ++ G+++R LP C H FH C+
Sbjct: 205 GMSRRLVKAMPSLIFSSFHEDNTTAFT----CAICLEDYTVGDKLRLLP-CCHKFHAACV 259
Query: 135 DTWLGS-HSSCPSCR 148
D+WL S + CP C+
Sbjct: 260 DSWLTSWRTFCPVCK 274
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
EC ICL+++ EEVR LP C H FH C+D WL S CP C+
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
EC ICL+++ EEVR LP C H FH C+D WL S CP C+
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCK 338
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLG--SHSSCPSCR 148
C +CLS+F + +++R LP+CGH FH C+D W+ + +CP CR
Sbjct: 85 CTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICR 129
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 101 VASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
V + C ICL +F + VR L +C H FHV CID+W +CP CR
Sbjct: 88 VKADVCVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICR 135
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C ICL G+ +R LP C H FH CID WLG SCP C+
Sbjct: 589 CVICLETPKIGDTIRHLP-CLHKFHKDCIDPWLGRSKSCPVCK 630
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 108 ICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
ICL F GE+++ LP C H +H C+D WL + SSCP CR
Sbjct: 109 ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCR 149
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 103 SSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+EC ICLS + E+R LP CGH FH C+D WL +++CP C+
Sbjct: 322 DAECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCK 366
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 68 PPRRASAAKGLKKKVL----------EALPKFTYVDGGGTGKWVASSECAICLSEFAAGE 117
PP ++AA ++ E LP + + G S CA+CL EF +
Sbjct: 57 PPYMSTAAHHHQESSFFFPVAARLAGEILPVIRFSELTRPGFGSGSDCCAVCLHEFENDD 116
Query: 118 EVRSLPQCGHGFHVPCIDTWLGSHS--SCPSCR 148
E+R L C H FH C+D W+ ++ +CP CR
Sbjct: 117 EIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCR 149
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 68 PPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGH 127
P R+ + L +++L + KF + G CA+CL EF +E+R L C H
Sbjct: 60 PETRSPFSALLIREILPVI-KFEELTNSGED---LPENCAVCLYEFEGEQEIRWLRNCRH 115
Query: 128 GFHVPCIDTWLG-SHSSCPSCR 148
FH C+D W+ +CP CR
Sbjct: 116 IFHRSCLDRWMDHDQKTCPLCR 137
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 56 LRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAA 115
L +++G G PP S K LK L D CA+C E
Sbjct: 330 LFEAEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVC--------CAVCKEEMIV 381
Query: 116 GEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
G+EV LP C H +H CI WLG ++CP CR
Sbjct: 382 GKEVAELP-CRHKYHSECIVPWLGIRNTCPVCR 413
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS-HSSCPSCR 148
S+C ICL E+ + +R+LP C H FH C+D WL H CP CR
Sbjct: 488 SQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHRVCPLCR 532
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW-LGSHSSCPSCR 148
C ICL EF A + V LP+C H FH+ CI+ W L H +CP CR
Sbjct: 62 CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCR 105
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 30 FVVIMAALLCALICVVGLTAIARCAWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKF 89
F+ ++ L+ + ++GL +L PV+ PP + E LP
Sbjct: 22 FLGLIRKLISTMFKIIGLPD-----FLEPEPVSTSWPDPPPTLTKPDSAAILAGEMLPVV 76
Query: 90 TYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHS--SCPSC 147
+ D S CA+CL +F +E+R L C H FH C+D W+ ++ +CP C
Sbjct: 77 RFSDINRP----ESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLC 132
Query: 148 R 148
R
Sbjct: 133 R 133
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 77 GLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDT 136
+ K +E + K V+ G G C+ICL EF G E+ + +C H FH C+ +
Sbjct: 55 AINKTTVETIIKVEDVEEGDEGC------CSICLEEFKIGHELMCIKKCRHVFHRFCMLS 108
Query: 137 WLGSHSSCPSCR 148
W+ ++ +CP CR
Sbjct: 109 WIDANRNCPICR 120
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 99 KWVASSE-CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
K +S+E C ICL EF G +V +LP CGH F C+ TW ++ CP CR
Sbjct: 167 KTTSSTERCTICLEEFNDGTKVMTLP-CGHEFDDECVLTWFETNHDCPLCR 216
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 72 ASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHV 131
+ ++GL ++++E LP Y G + A C IC ++ GE +LP C H +H
Sbjct: 163 GTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHS 221
Query: 132 PCIDTWLGSHSSCPSCR 148
CI WL + CP C
Sbjct: 222 ECISKWLSINKVCPVCN 238
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 72 ASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHV 131
+ ++GL ++++E LP Y G + A C IC ++ GE +LP C H +H
Sbjct: 163 GTESRGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHS 221
Query: 132 PCIDTWLGSHSSCPSCR 148
CI WL + CP C
Sbjct: 222 ECISKWLSINKVCPVCN 238
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C++CL + GE VR+LP C H FH CID WL +CP C+
Sbjct: 211 CSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 101 VASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
V EC IC E++ + LP C H +H+ C++ WL H+SCP CR
Sbjct: 476 VEKGECVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHTSCPQCR 522
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 66 GTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQC 125
G PP SA + ++ ++ V CAIC EF GEE + L +C
Sbjct: 110 GPPPASQSAIEAVRTVII------------TDEDLVKEKVCAICKEEFEVGEEGKEL-KC 156
Query: 126 GHGFHVPCIDTWLGSHSSCPSCR 148
H +H CI +WL H++CP CR
Sbjct: 157 LHLYHSSCIVSWLNIHNTCPICR 179
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 78 LKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
+ K ++ +P T + G + S C ICL + G+++R LP C H FHV C+D W
Sbjct: 208 MPKSMIIRMP--TTIFNGICDEATTSILCCICLENYEKGDKLRILP-CHHKFHVACVDLW 264
Query: 138 LGSHSS-CPSCR 148
LG S CP C+
Sbjct: 265 LGQRKSFCPVCK 276
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
CA+C +F GE R LP C H +H CI WL H+SCP CR
Sbjct: 169 CAVCKEDFIIGESARRLP-CSHIYHSDCIVPWLSDHNSCPLCR 210
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+EC+ICL + G E+R LP C H FH C+D WL +++CP C+
Sbjct: 321 AECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCK 364
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 54 AWLRRGPVAAGDGTPPRRASAAKGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEF 113
AW+ R + + + +S+ + + E+L + D + CA+CL +
Sbjct: 31 AWILRYRSRSSSSSSSQSSSSPSISSQTIKESLAVSAFRDAVERSPAAINDMCAVCLGDL 90
Query: 114 AAGEEVRSLPQCGHGFHVPCIDTWL---------GSHSSCPSCR 148
+E+R L C H FH CID WL +H +CP CR
Sbjct: 91 EDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCR 134
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 66 GTPPRRASAAKGLK--KKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLP 123
GTPP S GL + +E L + V CAIC E E+V+ LP
Sbjct: 262 GTPPASKSVVDGLPDVELTIEELSSVSIV-------------CAICKDEVVFKEKVKRLP 308
Query: 124 QCGHGFHVPCIDTWLGSHSSCPSCR 148
C H +H CI WLG ++CP CR
Sbjct: 309 -CKHYYHGECIIPWLGIRNTCPVCR 332
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ S C +C EF G E + +P C H +H CI WL H+SCP CR
Sbjct: 186 SDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCPVCR 231
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ S C +C EF G E + +P C H +H CI WL H+SCP CR
Sbjct: 186 SDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCPVCR 231
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ S C +C EF G E + +P C H +H CI WL H+SCP CR
Sbjct: 186 SDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHNSCPVCR 231
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 62 AAGDGTPPRRASAAKGLKKKVLEALPKFTY-VDGGGTGKWVASSECAICLSEFAAGEEVR 120
A DG P AS K V+++L + Y + TG+ C ICL EF+ G V
Sbjct: 25 AKIDGYNPTPAS------KLVVKSLARKIYKMTTSSTGEM-----CIICLEEFSEGRRVV 73
Query: 121 SLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+LP CGH F C+ W ++ SCP CR
Sbjct: 74 TLP-CGHDFDDECVLKWFETNHSCPLCR 100
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWV----------ASSECAICLSEFAAGEEVRSLPQC 125
KGL ++ + L Y G T W S+C+ICL E+A G+++ +LP C
Sbjct: 196 KGLSQERISRLRTHKY--GTKTKSWYCLHMKKKFVADDSQCSICLMEYAKGDKITTLP-C 252
Query: 126 GHGFHVPCIDTWLGSHSSCPSCR 148
H +H CI WL + C C+
Sbjct: 253 KHIYHKDCISQWLKQNKVCCICK 275
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLG 139
K +EAL F G V CA+C GE + LP CGH +H CI WLG
Sbjct: 235 KSAIEALETFEVSSSEGEMVMV----CAVCKDGMVMGETGKKLP-CGHCYHGDCIVPWLG 289
Query: 140 SHSSCPSCR 148
+ +SCP CR
Sbjct: 290 TRNSCPVCR 298
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS-HSS-CPSCR 148
S+C ICL E+ + +R+LP C H FH C+D WL HS CP CR
Sbjct: 488 SQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHSRVCPLCR 533
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
CAIC E AA E + LP C H +H CI WL + ++CP CR
Sbjct: 97 CAICREELAANERLSELP-CRHYYHKECISNWLSNRNTCPLCR 138
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 103 SSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
++C ICLS + G E+ SLP C H FH CI WL +++CP C+
Sbjct: 289 DADCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCK 333
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHS-SCPSCR 148
S+C +CLS+ GEEVR L +C H FH C++ WL + +CP CR
Sbjct: 84 SDCVVCLSKLKEGEEVRKL-ECRHVFHKKCLEGWLHQFNFTCPLCR 128
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLG 139
K +E+LP+ D A + CA+C F AG E R +P C H FH CI WL
Sbjct: 193 KSAIESLPRVEISDCHTK----AEANCAVCTEVFEAGIEGREMP-CKHIFHGDCIVPWLS 247
Query: 140 SHSSCPSCR 148
+SCP CR
Sbjct: 248 IRNSCPVCR 256
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 83 LEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS-H 141
L L + Y D A+S+C +CLS+ GEEVR L C H FH C++ WL +
Sbjct: 58 LNRLFSYRYSDN-------AASDCIVCLSKLKTGEEVRKL-DCRHVFHKQCLEGWLQHLN 109
Query: 142 SSCPSCR 148
+CP CR
Sbjct: 110 FNCPLCR 116
>AT1G57730.1 | Symbols: | RING/U-box superfamily protein |
chr1:21380858-21381382 REVERSE LENGTH=174
Length = 174
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 91 YVDGGGTGKWVASSECAICLSEFAAG-EEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+V+ + + + CAICL + + + + +P C H FH CI WLG + CP CR
Sbjct: 101 FVEESTSSSPLENKTCAICLEDMSQDVHDYQEMPNCPHVFHNDCIYKWLGHSNLCPLCR 159
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 101 VASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+ +C+IC E+ +EV L CGH FHV C+ WL ++CP C+
Sbjct: 315 LVDRKCSICQDEYEREDEVGEL-NCGHSFHVHCVKQWLSRKNACPVCK 361
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHS-SCPSCR 148
C IC EF G+EVR L C H +H CID W+ +CP CR
Sbjct: 71 CRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMTCPLCR 114
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 101 VASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
V + +C ICL+E ++G LP C H FH CI TWL + SCP CR
Sbjct: 169 VPALDCPICLTELSSGVSRMKLP-CSHVFHRDCIMTWLKKNPSCPICR 215
>AT3G28620.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:10727826-10728461 FORWARD
LENGTH=211
Length = 211
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLG-SHSSCPSCR 148
CAICL E+ +P C H FH PC+ WL ++SCP CR
Sbjct: 160 CAICLENLLRSEDYCEMPTCSHYFHEPCLTEWLTRDNNSCPLCR 203
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 103 SSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+CAICL F GE + LP C H FH C+ WL ++ CP CR
Sbjct: 147 QQDCAICLDRFKKGETLVHLP-CAHKFHSICLLPWLDTNVYCPYCR 191
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 103 SSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
++C ICLS + G E+ +LP C H FH CI WL ++CP C+
Sbjct: 304 DADCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCK 348
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C +C E+ GE++ +L +CGH FH CI WL + CP C+
Sbjct: 637 CCVCQEEYTEGEDMGTL-ECGHEFHSQCIKEWLKQKNLCPICK 678
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 76 KGLKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCID 135
+GL + + L + T+ + +C+ICL F G+ + SLP C H FH C++
Sbjct: 176 QGLTQDAINCLHRQTFSSAEVKSEM---RDCSICLESFTKGDMLISLP-CTHSFHSSCLN 231
Query: 136 TWLGSHSSCPSCR 148
WL + CP CR
Sbjct: 232 PWLRACGDCPCCR 244
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+C+IC E+ G+EV +LP C H +HV C WL + CP C+
Sbjct: 467 KCSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 105 ECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+C+IC E+ G+EV +LP C H +HV C WL + CP C+
Sbjct: 467 KCSICQEEYVDGDEVGTLP-CQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 106 CAICLSEFA-AGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
C+IC+ +F+ + E++ +P C H FH C+ WLG +SCP CR
Sbjct: 159 CSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCR 202
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 106 CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
CA+C E E+VR LP C H +H CI WLG ++CP CR
Sbjct: 335 CAVCKDEMLVEEKVRRLP-CSHFYHGECIIPWLGIRNTCPVCR 376
>AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr2:10397588-10398184 FORWARD
LENGTH=198
Length = 198
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 78 LKKKVLEALPKFTYVDGGGTGKWVASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
L +KV +P + + S CAICL + E +P C H +H C+ W
Sbjct: 122 LTQKVYSVVPCISSPSATDVDQEEESETCAICLENMSRSENYCQMPYCKHCYHEGCVTKW 181
Query: 138 -LGSHSSCPSCR 148
+G ++SCP CR
Sbjct: 182 VIGHNNSCPLCR 193
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSE--CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
K ++ALP T K + SS+ C +C EF E + +P C H +H CI W
Sbjct: 163 KSSIDALPTIKI-----TQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPW 216
Query: 138 LGSHSSCPSCR 148
L H+SCP CR
Sbjct: 217 LVQHNSCPVCR 227
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSE--CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
K ++ALP T K + SS+ C +C EF E + +P C H +H CI W
Sbjct: 163 KSSIDALPTIKI-----TQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPW 216
Query: 138 LGSHSSCPSCR 148
L H+SCP CR
Sbjct: 217 LVQHNSCPVCR 227
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 80 KKVLEALPKFTYVDGGGTGKWVASSE--CAICLSEFAAGEEVRSLPQCGHGFHVPCIDTW 137
K ++ALP T K + SS+ C +C EF E + +P C H +H CI W
Sbjct: 163 KSSIDALPTIKI-----TQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPW 216
Query: 138 LGSHSSCPSCR 148
L H+SCP CR
Sbjct: 217 LVQHNSCPVCR 227
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 104 SECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
S+C +C+ EF G + LP C H +H CI WL ++SCP CR
Sbjct: 222 SQCTVCMEEFIVGGDATELP-CKHIYHKDCIVPWLRLNNSCPICR 265
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS-HSSCPSCR 148
A +EC++CLS+F E+ L +CGH FH C++ W+ + +CP CR
Sbjct: 99 ADNECSVCLSKFQGDSEINKL-KCGHLFHKTCLEKWIDYWNITCPLCR 145
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 102 ASSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGS-HSSCPSCR 148
A +EC++CLS+F E+ L +CGH FH C++ W+ + +CP CR
Sbjct: 99 ADNECSVCLSKFQGDSEINKL-KCGHLFHKTCLEKWIDYWNITCPLCR 145
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 103 SSECAICLSEFAAGEEVRSLPQCGHGFHVPCIDTWLGSHSSCPSCR 148
+S C ICL EF GE V +LP CGH F CI W CP CR
Sbjct: 155 ASVCTICLEEFEKGEIVVTLP-CGHEFDDGCIGKWFLKDHVCPLCR 199