Miyakogusa Predicted Gene
- Lj0g3v0169239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0169239.1 Non Chatacterized Hit- tr|I1N1T9|I1N1T9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,79.61,0,no
description,NULL; no description,Transketolase-like, C-terminal;
TRANSKETOLASE_2,Transketolase bi,gene.g12997.t1.1
(535 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G15560.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulos... 766 0.0
AT3G21500.2 | Symbols: DXPS1 | 1-deoxy-D-xylulose 5-phosphate sy... 691 0.0
AT3G21500.1 | Symbols: DXPS1 | 1-deoxy-D-xylulose 5-phosphate sy... 686 0.0
AT5G11380.1 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate sy... 540 e-154
AT5G11380.2 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate sy... 362 e-100
AT5G50850.1 | Symbols: MAB1 | Transketolase family protein | chr... 67 3e-11
>AT4G15560.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 |
Deoxyxylulose-5-phosphate synthase |
chr4:8884218-8887254 FORWARD LENGTH=717
Length = 717
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/557 (68%), Positives = 439/557 (78%), Gaps = 24/557 (4%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
M T++ T+GL+GF KR ES HD FG GHSST+ISAG MAV RDL K NNV++VIGDGA
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGA 220
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAG+LD+++IV+LNDNKQVSLPTATLDGP+ PVGALS LS++Q++
Sbjct: 221 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPAL 280
Query: 119 RKIRDTAK--------------VKHNQANRRTNTPSCSKSF--------GPVDGHNIEDL 156
R++R+ AK K ++ R + + S F GPVDGHNI+DL
Sbjct: 281 RELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDL 340
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLS 216
V I ++VK+ T GPVLIHVVTEKG+GYP AE A DK H V KFDP TGRQFK + T S
Sbjct: 341 VAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQS 400
Query: 217 YNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 276
Y YFAE+L+ EAE+DK++VAIHAAMGGGTGLN FQ+RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 401 YTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 460
Query: 277 ATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFM 336
A EG KPFCAI SSF+QR YDQVVHDVDLQKLPVRFA+DR GLVG DGPTHCGAFD+TFM
Sbjct: 461 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 520
Query: 337 ASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 396
A LPNM+VMAPSDEA+L +MVATA AIDDRPSCFR+PRGNGIG +LP NKG P+EIGKG
Sbjct: 521 ACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKG 580
Query: 397 RILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEV 456
RIL EG RVALLGYGS VQ CL AA ML+ G+ VTVADARFCKPLD LI+ LAK HEV
Sbjct: 581 RILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEV 640
Query: 457 LITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKH 516
LIT+EEGSIGGF SHV QFL++ G+LDG LKWRPM+LPD+YI+HG+ Q EAGL H
Sbjct: 641 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSH 700
Query: 517 VAATVLSLIGRAKEDLL 533
+AAT L+LIG +E L
Sbjct: 701 IAATALNLIGAPREALF 717
>AT3G21500.2 | Symbols: DXPS1 | 1-deoxy-D-xylulose 5-phosphate
synthase 1 | chr3:7573907-7576594 REVERSE LENGTH=641
Length = 641
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/489 (69%), Positives = 390/489 (79%), Gaps = 12/489 (2%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
M TI+ T+GL+G+ KR ES HD+FG GHSST++SAG MAV RDL N+V+SVIGDGA
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 210
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAG+L +N+IV+LNDNKQVSLPTA LDGP PVGALS LS++Q++
Sbjct: 211 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNCGM 270
Query: 119 RKIRDTAKVKHNQANRRTNTPSCSKSFGPVDGHNIEDLVLIFEKVKAMPTLGPVLIHVVT 178
IR+T+ + GPVDGHNI+DLV I E +K+ T+GPVLIHVVT
Sbjct: 271 --IRETSSTLFEELGFHY--------VGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVT 320
Query: 179 EKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLSYNQYFAESLIKEAEIDKNIVAI 238
EKG+GYP AE A DK H V KFDP+TG+QFK S T SY F E+LI EAE DK+IVAI
Sbjct: 321 EKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAI 380
Query: 239 HAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEGFKPFCAISSSFLQRGYDQ 298
HAAMGGGT LN F+ RFP RCFDVGIAEQHAVTFAAGLA EG KPFC I SSF+QR YDQ
Sbjct: 381 HAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQ 440
Query: 299 VVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFMASLPNMVVMAPSDEAELMHMVA 358
VVHDVDLQKLPVRFA+DR GL+G DGPTHCGAFD+TFMA LPNM+VMAPSDEAEL +MVA
Sbjct: 441 VVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVA 500
Query: 359 TAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILIEGSRVALLGYGSMVQRCL 418
TAAAIDDRPSCFR+ RGNGIG SLP NKG PL+IG+GRIL +G RVALLGYGS VQRCL
Sbjct: 501 TAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCL 560
Query: 419 QAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITLEEGSIGGFASHVSQFLSI 478
+AA ML G+ +TVADARFCKPLD LI+ LAK HEVLIT+EEGSIGGF SHV QFL++
Sbjct: 561 EAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAL 620
Query: 479 SGILDGPLK 487
G+LDG LK
Sbjct: 621 DGLLDGKLK 629
>AT3G21500.1 | Symbols: DXPS1 | 1-deoxy-D-xylulose 5-phosphate
synthase 1 | chr3:7573907-7576594 REVERSE LENGTH=640
Length = 640
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/489 (69%), Positives = 390/489 (79%), Gaps = 13/489 (2%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
M TI+ T+GL+G+ KR ES HD+FG GHSST++SAG MAV RDL N+V+SVIGDGA
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 210
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAG+L +N+IV+LNDNKQVSLPTA LDGP PVGALS LS++Q++
Sbjct: 211 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNCGM 270
Query: 119 RKIRDTAKVKHNQANRRTNTPSCSKSFGPVDGHNIEDLVLIFEKVKAMPTLGPVLIHVVT 178
IR+T+ + GPVDGHNI+DLV I E +K+ T+GPVLIHVVT
Sbjct: 271 --IRETSSTLFEELGFHY--------VGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVT 320
Query: 179 EKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLSYNQYFAESLIKEAEIDKNIVAI 238
EKG+GYP AE A DK H V KFDP+TG+QFK S T SY F E+LI EAE DK+IVAI
Sbjct: 321 EKGRGYPYAERADDKYH-VLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAI 379
Query: 239 HAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEGFKPFCAISSSFLQRGYDQ 298
HAAMGGGT LN F+ RFP RCFDVGIAEQHAVTFAAGLA EG KPFC I SSF+QR YDQ
Sbjct: 380 HAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQ 439
Query: 299 VVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFMASLPNMVVMAPSDEAELMHMVA 358
VVHDVDLQKLPVRFA+DR GL+G DGPTHCGAFD+TFMA LPNM+VMAPSDEAEL +MVA
Sbjct: 440 VVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVA 499
Query: 359 TAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILIEGSRVALLGYGSMVQRCL 418
TAAAIDDRPSCFR+ RGNGIG SLP NKG PL+IG+GRIL +G RVALLGYGS VQRCL
Sbjct: 500 TAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCL 559
Query: 419 QAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITLEEGSIGGFASHVSQFLSI 478
+AA ML G+ +TVADARFCKPLD LI+ LAK HEVLIT+EEGSIGGF SHV QFL++
Sbjct: 560 EAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAL 619
Query: 479 SGILDGPLK 487
G+LDG LK
Sbjct: 620 DGLLDGKLK 628
>AT5G11380.1 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate
synthase 3 | chr5:3630172-3633250 FORWARD LENGTH=700
Length = 700
Score = 540 bits (1392), Expect = e-154, Method: Compositional matrix adjust.
Identities = 279/554 (50%), Positives = 372/554 (67%), Gaps = 45/554 (8%)
Query: 5 KMTSGLAGFPKRDESIHDAFGVGHSSTSISAGM--AVARDLLEKKNNVISVIGDGAMTAG 62
+ SG++G R ES +D+FG GH SISAG+ AVARD+ K++ V++VI + +TAG
Sbjct: 166 RQNSGISGVTSRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAG 225
Query: 63 LAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEFRKIR 122
AYEA++NAG+LD+N+IV+LND++ SL +G + ALS +SKIQ+S FRK R
Sbjct: 226 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 284
Query: 123 DTAKV--------------KHNQANRRTNTPSCSKSF--------GPVDGHNIEDLVLIF 160
+ AK K ++ R P+ S F GPVDGHNIEDLV +
Sbjct: 285 ELAKAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVL 344
Query: 161 EKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLSYNQY 220
+V ++ ++GPVL+HV+TE + A+ + N+ D +T Y+
Sbjct: 345 REVSSLDSMGPVLVHVITEGNRD-------AETVKNIMVKDRRT------------YSDC 385
Query: 221 FAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEG 280
F E+L+ EAE D++IV +HA M L FQ+RFP+R F+VG+AEQHAVTF+AGL++ G
Sbjct: 386 FVEALVMEAEKDRDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGG 445
Query: 281 FKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFMASLP 340
KPFC I S+FLQR YDQVVHDVD Q+ VRF + GLVG DGP CGAFDI FM+SLP
Sbjct: 446 LKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLP 505
Query: 341 NMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILI 400
NM+ MAP+DE EL++MVATAA + DRP CFRFPRG+ + + L G P+EIG+GR+L+
Sbjct: 506 NMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNMNY-LVPTGLPIEIGRGRVLV 564
Query: 401 EGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITL 460
EG VALLGYG+MVQ CL A +L +G+ VTVADARFCKPLD L++ L + H+ LIT+
Sbjct: 565 EGQDVALLGYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITV 624
Query: 461 EEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKHVAAT 520
EEG +GGF SHV+QF+++ G LDG +KWRP++LPD YIE S + Q AGL+ H+AAT
Sbjct: 625 EEGCVGGFGSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAAT 684
Query: 521 VLSLIGRAKEDLLL 534
LSL+GR +E LLL
Sbjct: 685 ALSLLGRTREALLL 698
>AT5G11380.2 | Symbols: DXPS3 | 1-deoxy-D-xylulose 5-phosphate
synthase 3 | chr5:3630172-3632762 FORWARD LENGTH=565
Length = 565
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/396 (48%), Positives = 256/396 (64%), Gaps = 44/396 (11%)
Query: 5 KMTSGLAGFPKRDESIHDAFGVGHSSTSISAGM--AVARDLLEKKNNVISVIGDGAMTAG 62
+ SG++G R ES +D+FG GH SISAG+ AVARD+ K++ V++VI + +TAG
Sbjct: 166 RQNSGISGVTSRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAG 225
Query: 63 LAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEFRKIR 122
AYEA++NAG+LD+N+IV+LND++ SL +G + ALS +SKIQ+S FRK R
Sbjct: 226 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 284
Query: 123 DTAKV--------------KHNQANRRTNTPSCSKSF--------GPVDGHNIEDLVLIF 160
+ AK K ++ R P+ S F GPVDGHNIEDLV +
Sbjct: 285 ELAKAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVL 344
Query: 161 EKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLSYNQY 220
+V ++ ++GPVL+HV+TE + A+ + N+ D +T Y+
Sbjct: 345 REVSSLDSMGPVLVHVITEGNRD-------AETVKNIMVKDRRT------------YSDC 385
Query: 221 FAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEG 280
F E+L+ EAE D++IV +HA M L FQ+RFP+R F+VG+AEQHAVTF+AGL++ G
Sbjct: 386 FVEALVMEAEKDRDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGG 445
Query: 281 FKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFMASLP 340
KPFC I S+FLQR YDQVVHDVD Q+ VRF + GLVG DGP CGAFDI FM+SLP
Sbjct: 446 LKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLP 505
Query: 341 NMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGN 376
NM+ MAP+DE EL++MVATAA + DRP CFRFPRG+
Sbjct: 506 NMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGS 541
>AT5G50850.1 | Symbols: MAB1 | Transketolase family protein |
chr5:20689671-20692976 FORWARD LENGTH=363
Length = 363
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 21/228 (9%)
Query: 251 FQKRFPERCFDVGIAEQHAVTFAAGLATEGFKPFCA-ISSSFLQRGYDQVVHDVDLQK-- 307
+K PER +D I E G A G KP ++ +F + D +++
Sbjct: 77 LEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYM 136
Query: 308 ------LPVRFAVDRG--GLVGGDGPTHCGAFDITFMASLPNMVVMAPSDEAELMHMVAT 359
+P+ F RG G G G H + + AS+P + V+AP AE +
Sbjct: 137 SAGQINVPIVF---RGPNGAAAGVGAQHSQCY-AAWYASVPGLKVLAPYS-AEDARGLLK 191
Query: 360 AAAIDDRPSCFRFPRGNGIGASLPLNNKGTP----LEIGKGRILIEGSRVALLGYGSMVQ 415
AA D P F G S P++ + L IGK +I EG V ++ + MV
Sbjct: 192 AAIRDPDPVVF-LENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVG 250
Query: 416 RCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITLEEG 463
L+AAE L G+ V + R +PLD I ++ L+T+EEG
Sbjct: 251 FALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEG 298