Miyakogusa Predicted Gene

Lj0g3v0168659.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0168659.1 tr|Q56V56|Q56V56_TOBAC Non-specific
lipid-transfer protein (Fragment) OS=Nicotiana tabacum GN=LTP1
P,48.45,2e-19,Bifunctional inhibitor/lipid-transfer protein/seed
storage 2S albumin,Bifunctional inhibitor/plant l,gene.g12959.t1.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01870.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    86   6e-18
AT5G59320.1 | Symbols: LTP3 | lipid transfer protein 3 | chr5:23...    84   2e-17
AT2G38530.1 | Symbols: LTP2, LP2, cdf3 | lipid transfer protein ...    82   8e-17
AT2G38540.1 | Symbols: LP1, LTP1, ATLTP1 | lipid transfer protei...    80   2e-16
AT3G51590.1 | Symbols: LTP12 | lipid transfer protein 12 | chr3:...    79   5e-16
AT5G59310.1 | Symbols: LTP4 | lipid transfer protein 4 | chr5:23...    77   2e-15
AT2G15050.3 | Symbols: LTP, LTP7 | lipid transfer protein | chr2...    75   1e-14
AT2G15050.1 | Symbols: LTP, LTP7 | lipid transfer protein | chr2...    75   1e-14
AT3G08770.2 | Symbols: LTP6 | lipid transfer protein 6 | chr3:26...    74   2e-14
AT3G08770.1 | Symbols: LTP6 | lipid transfer protein 6 | chr3:26...    74   3e-14
AT2G15050.2 | Symbols: LTP, LTP7 | lipid transfer protein | chr2...    73   4e-14
AT3G51600.1 | Symbols: LTP5 | lipid transfer protein 5 | chr3:19...    72   5e-14
AT4G33355.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    72   8e-14
AT4G33355.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    71   1e-13
AT2G18370.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    58   2e-09
AT2G15325.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    49   7e-07

>AT5G01870.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr5:337234-337678 FORWARD LENGTH=116
          Length = 116

 Score = 85.5 bits (210), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 6/108 (5%)

Query: 15  MVMVLGSPFA---DAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDILRQAKTVPD 71
           + ++L S FA   +AA+ C  +   + PC+ Y+      +P +CCNGIR + +QA +  D
Sbjct: 8   LCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGG-AIPYSCCNGIRMLSKQATSASD 66

Query: 72  RQGVCRCLKSTV--YNLPGINLPALASVPGKCGAKLSYKISPSIDCNT 117
           +QGVCRC+KS V   +   I L   A++PGKCG KL YKI PS +CN+
Sbjct: 67  KQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNS 114


>AT5G59320.1 | Symbols: LTP3 | lipid transfer protein 3 |
           chr5:23929051-23929492 FORWARD LENGTH=115
          Length = 115

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 6/117 (5%)

Query: 1   MAAALVLKFASLAVMVMVLGSPFADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIR 60
           MA AL   F  L + V ++ S   DAA+ CG +  ++APC  YL      VP +CC G++
Sbjct: 1   MAFALRF-FTCLVLTVCIVAS--VDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVK 56

Query: 61  DILRQAKTVPDRQGVCRCLKSTVYNLPGINLPALAS-VPGKCGAKLSYKISPSIDCN 116
            +   AKT PDRQ  CRC++ST  ++ G+N P+LAS +PGKCG  + Y IS S +CN
Sbjct: 57  TLNSMAKTTPDRQQACRCIQSTAKSISGLN-PSLASGLPGKCGVSIPYPISMSTNCN 112


>AT2G38530.1 | Symbols: LTP2, LP2, cdf3 | lipid transfer protein 2 |
           chr2:16128481-16128948 FORWARD LENGTH=118
          Length = 118

 Score = 82.0 bits (201), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 4   ALVLKFASLAVMVMVLGSPF-ADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDI 62
           A V+K A + +  M++  P  A+A + CG +   +A CI YL    P +   CCNG+ ++
Sbjct: 2   AGVMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAP-LTQGCCNGVTNL 60

Query: 63  LRQAKTVPDRQGVCRCLKSTVYNL-PGINLPALASVPGKCGAKLSYKISPSIDCNT 117
              A T PDRQ  CRCL+S    + PG+N    A +P  C   + YKIS S +CNT
Sbjct: 61  KNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNT 116


>AT2G38540.1 | Symbols: LP1, LTP1, ATLTP1 | lipid transfer protein 1
           | chr2:16130418-16130893 FORWARD LENGTH=118
          Length = 118

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 4   ALVLKFASLAVMVMVLGSPF-ADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDI 62
           A V+K A L +  M++  P  ++AAL CG +   +A CIGY+      +P ACC+G++++
Sbjct: 2   AGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGG-VIPPACCSGVKNL 60

Query: 63  LRQAKTVPDRQGVCRCLKSTVYNL-PGINLPALASVPGKCGAKLSYKISPSIDCNT 117
              AKT PDRQ  C C++     L  G+N    A +P  CG  + YKIS S +C T
Sbjct: 61  NSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKT 116


>AT3G51590.1 | Symbols: LTP12 | lipid transfer protein 12 |
           chr3:19135828-19136654 REVERSE LENGTH=119
          Length = 119

 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 2/106 (1%)

Query: 12  LAVMVMVLGSPFADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDILRQAKTVPD 71
           L V+ + + SP  ++ + CG +T T+A C+ YL N  P +P+ CC G++ + + A+T PD
Sbjct: 11  LIVLTIYMASP-TESTIQCGTVTSTLAQCLTYLTNSGP-LPSQCCVGVKSLYQLAQTTPD 68

Query: 72  RQGVCRCLKSTVYNLPGINLPALASVPGKCGAKLSYKISPSIDCNT 117
           R+ VC CLK     + G+N   +A++P  CG  + Y IS S +C++
Sbjct: 69  RKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDS 114


>AT5G59310.1 | Symbols: LTP4 | lipid transfer protein 4 |
           chr5:23925296-23925772 REVERSE LENGTH=112
          Length = 112

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 9/116 (7%)

Query: 4   ALVLKFASLAVM-VMVLGSPFADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDI 62
           A  L+F +  V+ V ++ S   DAA+ CG +  +++PC+GYL      VP  CC G++ +
Sbjct: 2   AFALRFFTCFVLTVFIVAS--VDAAITCGTVASSLSPCLGYLSKGG-VVPPPCCAGVKKL 58

Query: 63  LRQAKTVPDRQGVCRCLKSTVYNLPGINLPALAS-VPGKCGAKLSYKISPSIDCNT 117
              A+T PDRQ  CRCL+S      G+N P+LAS +PGKCG  + Y IS S +C T
Sbjct: 59  NGMAQTTPDRQQACRCLQSAAK---GVN-PSLASGLPGKCGVSIPYPISTSTNCAT 110


>AT2G15050.3 | Symbols: LTP, LTP7 | lipid transfer protein |
           chr2:6518888-6519888 FORWARD LENGTH=122
          Length = 122

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)

Query: 4   ALVLKFASLAVMVMVLGSPF-ADAALPCGQLTFTVAPCIGYLRNPTPTVPA-ACCNGIRD 61
           A ++K   L  + ++   P  A AAL CG++   + PC GYL N   T P   CCNG+R 
Sbjct: 2   AGLMKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRK 61

Query: 62  ILRQAKTVPDRQGVCRCLKSTVYNL-PGINLPALASVPGKCGAKLSY--KISPSIDCNT 117
           +     T  DR+  CRC+K+   N+ PG+N    A +P +CG K+ Y  +I  +  CNT
Sbjct: 62  LNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNT 120


>AT2G15050.1 | Symbols: LTP, LTP7 | lipid transfer protein |
           chr2:6518888-6519259 FORWARD LENGTH=123
          Length = 123

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)

Query: 4   ALVLKFASLAVMVMVLGSPF-ADAALPCGQLTFTVAPCIGYLRNPTPTVPA-ACCNGIRD 61
           A ++K   L  + ++   P  A AAL CG++   + PC GYL N   T P   CCNG+R 
Sbjct: 2   AGLMKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRK 61

Query: 62  ILRQAKTVPDRQGVCRCLKSTVYNL-PGINLPALASVPGKCGAKLSY--KISPSIDCNT 117
           +     T  DR+  CRC+K+   N+ PG+N    A +P +CG K+ Y  +I  +  CNT
Sbjct: 62  LNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCNT 120


>AT3G08770.2 | Symbols: LTP6 | lipid transfer protein 6 |
           chr3:2664330-2664784 REVERSE LENGTH=117
          Length = 117

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 5/97 (5%)

Query: 24  ADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDILRQAKTVPDRQGVCRCLKSTV 83
            +AA+ C  +   + PC+ Y+    P VP  CCNG+  +  QA+T  DRQGVCRC+KS +
Sbjct: 17  GEAAVSCNTVIADLYPCLSYVTQGGP-VPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAI 75

Query: 84  YNL---PGINLPALASVPGKCGAKLSYKISPSIDCNT 117
             L   P     AL  +P KCG  L YK SPS DC++
Sbjct: 76  GGLTLSPRTIQNAL-ELPSKCGVDLPYKFSPSTDCDS 111


>AT3G08770.1 | Symbols: LTP6 | lipid transfer protein 6 |
           chr3:2664349-2664784 REVERSE LENGTH=113
          Length = 113

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 5/97 (5%)

Query: 24  ADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDILRQAKTVPDRQGVCRCLKSTV 83
            +AA+ C  +   + PC+ Y+    P VP  CCNG+  +  QA+T  DRQGVCRC+KS +
Sbjct: 17  GEAAVSCNTVIADLYPCLSYVTQGGP-VPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAI 75

Query: 84  YNL---PGINLPALASVPGKCGAKLSYKISPSIDCNT 117
             L   P     AL  +P KCG  L YK SPS DC++
Sbjct: 76  GGLTLSPRTIQNAL-ELPSKCGVDLPYKFSPSTDCDS 111


>AT2G15050.2 | Symbols: LTP, LTP7 | lipid transfer protein |
           chr2:6518888-6519888 FORWARD LENGTH=115
          Length = 115

 Score = 73.2 bits (178), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 4   ALVLKFASLAVMVMVLGSPF-ADAALPCGQLTFTVAPCIGYLRNPTPTVPA-ACCNGIRD 61
           A ++K   L  + ++   P  A AAL CG++   + PC GYL N   T P   CCNG+R 
Sbjct: 2   AGLMKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRK 61

Query: 62  ILRQAKTVPDRQGVCRCLKSTVYNL-PGINLPALASVPGKCGAKLSYKISPSI 113
           +     T  DR+  CRC+K+   N+ PG+N    A +P +CG K+ Y    S+
Sbjct: 62  LNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQISV 114


>AT3G51600.1 | Symbols: LTP5 | lipid transfer protein 5 |
           chr3:19138661-19139124 REVERSE LENGTH=118
          Length = 118

 Score = 72.4 bits (176), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 6   VLKFASLAVMVMVLGSPFA-DAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDILR 64
           +LK ++L ++ M++ +P A +AA+ CG +T ++  C  YL      +P  CC+G++ +  
Sbjct: 4   LLKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYL-TRGGFIPRGCCSGVQRLNS 62

Query: 65  QAKTVPDRQGVCRCLKSTVYNLPG-INLPALASVPGKCGAKLSYKISPSIDCNT 117
            A+T  DRQ  CRC++     L   +N    A +PG C  ++SY IS   +CNT
Sbjct: 63  LARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNT 116


>AT4G33355.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr4:16067097-16067568 FORWARD LENGTH=119
          Length = 119

 Score = 72.0 bits (175), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 12  LAVMVMVLGSPFADAALPCGQLTFTVAPCIGYLR---NPTPTVPAACCNGIRDILRQAKT 68
           L V+ ++LG  +   A+ C Q+   +A C+ YL+   NP+P     CCNG+  +   A  
Sbjct: 13  LLVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM----CCNGLNSLKAAAPE 68

Query: 69  VPDRQGVCRCLKSTVYNLPGINLPALASVPGKCGAKLSYKISPSIDCNT 117
             DRQ  C CLKS    +PGIN      +P KCG  +    S ++DCN+
Sbjct: 69  KADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNS 117


>AT4G33355.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr4:16067097-16067450 FORWARD LENGTH=117
          Length = 117

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 12  LAVMVMVLGSPFADAALPCGQLTFTVAPCIGYLR---NPTPTVPAACCNGIRDILRQAKT 68
           L V+ ++LG  +   A+ C Q+   +A C+ YL+   NP+P     CCNG+  +   A  
Sbjct: 13  LLVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM----CCNGLNSLKAAAPE 68

Query: 69  VPDRQGVCRCLKSTVYNLPGINLPALASVPGKCGAKLSYKISPSIDCN 116
             DRQ  C CLKS    +PGIN      +P KCG  +    S ++DCN
Sbjct: 69  KADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCN 116


>AT2G18370.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr2:7980687-7981475 FORWARD LENGTH=116
          Length = 116

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)

Query: 6   VLK-FASLAVMVMVLGSPFADAALPCGQLTFTVAPCIGYLRNPTPTVPAACCNGIRDILR 64
           VLK  A ++V+ +     ++++A+ C  +   + PC+ YL + +   P  CC+G++ +  
Sbjct: 3   VLKCLAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAA 62

Query: 65  QAKTVPDRQGVCRCLKSTVYNLPGINLPALASVPGKCGAKLSYKISPSIDCNT 117
              T  D++  C+C+KS V N   +      ++   CGA L    SP++DC T
Sbjct: 63  ATTTSADKKAACQCIKS-VANSVTVKPELAQALASNCGASLPVDASPTVDCTT 114


>AT2G15325.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr2:6669864-6670356 REVERSE LENGTH=121
          Length = 121

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 29  PCGQLTFTVAPCIGYLRNPTPTVPA-ACCNGIRDILRQAKTVPDRQGVCRCLKSTVYNLP 87
           PC + T  + PC+ YL  P    P+  CC+G+  + +  KT  DR  +C CL S    + 
Sbjct: 30  PCEEATNLLTPCLRYLWAPPEAKPSPECCSGLDKVNKGVKTYDDRHDMCICLSSEA-AIT 88

Query: 88  GINLPALASVPGKCGAKLSYKISPSIDCNT 117
             +     ++P  C   L   + P  DC+T
Sbjct: 89  SADQYKFDNLPKLCNVALFAPVGPKFDCST 118