Miyakogusa Predicted Gene

Lj0g3v0167759.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0167759.3 Non Chatacterized Hit- tr|G0RCE6|G0RCE6_HYPJQ
Putative uncharacterized protein OS=Hypocrea jecorina
,28.04,2e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; seg,NULL; CELL CYCLE CHECKPOINT PROTEIN
R,CUFF.10503.3
         (342 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66130.1 | Symbols: ATRAD17, RAD17 | RADIATION SENSITIVE 17 |...   368   e-102

>AT5G66130.1 | Symbols: ATRAD17, RAD17 | RADIATION SENSITIVE 17 |
           chr5:26434236-26437091 FORWARD LENGTH=599
          Length = 599

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/323 (58%), Positives = 232/323 (71%), Gaps = 8/323 (2%)

Query: 25  SLRSTRSCTKPKPRS-----TTSRGHKRARVSRSGP---HISKVHEINLFDDDFSQVFTG 76
           +LRS+RS  K KPRS     T  R  KRAR+S +       S V +I L  +DF +  +G
Sbjct: 18  NLRSSRSNAKSKPRSSAGTATNPRASKRARLSGASATQEDSSLVDKIRLSFEDFDEALSG 77

Query: 77  SKVSAGTQRSNAEELWVNKYEPHSLEELAVHKKKVEEVKTWFEERLKPSKGLNRNNVLVV 136
            KVS+G +RS   +LWV+KY P +LEEL+VHKKKV+EVK WF+E L   K   RNNVL+V
Sbjct: 78  FKVSSGYERSKNTDLWVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLV 137

Query: 137 SGQAGVGKSATIHVIAAHLGAVVCGWNTPTPVIWQEHLYNTGTGTRYTSKLDEFETFVDR 196
           +GQAGVGKSATIH+I + LG  V  WN P P IWQEH++NT +G +YTSKLDEFE FV+ 
Sbjct: 138 TGQAGVGKSATIHLITSILGVTVHEWNAPIPTIWQEHVHNTSSGLKYTSKLDEFENFVES 197

Query: 197 VRKYGLMPTSFDVESKPSTILLIDDLPMTNGKTAFERLKYCLHLLVHSTQIPTAILVTDY 256
            RKYG+M +S     K   +LLIDDLP+ NG+ AFERL+ CL LLV STQIPT IL+TD+
Sbjct: 198 TRKYGVMASSSTDGIKAPVVLLIDDLPLANGRHAFERLQNCLLLLVKSTQIPTVILITDH 257

Query: 257 GNVDSADCNARCMEELKLSLESSGACKVAFNPITTNSIKKILFRICQMEHCDVSADDVDL 316
            N DS+D  AR ME+ + SLE +GA KVAFNPIT NSIKK+L RIC+ EHC V+  ++D 
Sbjct: 258 NNADSSDQTARRMEDTQSSLERAGALKVAFNPITKNSIKKVLQRICREEHCKVTTMEIDQ 317

Query: 317 IAKASGGDIRHAITSLQFFCLKP 339
           +A ASGGDIRHAITSLQ F +KP
Sbjct: 318 MATASGGDIRHAITSLQLFSVKP 340